####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS471_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS471_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 2.18 2.18 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 37 1 - 37 1.99 2.22 LCS_AVERAGE: 85.48 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 1 - 20 0.92 2.69 LONGEST_CONTINUOUS_SEGMENT: 20 2 - 21 0.92 2.72 LONGEST_CONTINUOUS_SEGMENT: 20 5 - 24 0.96 2.40 LCS_AVERAGE: 35.22 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 20 37 41 3 4 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 20 37 41 5 16 22 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 20 37 41 5 13 22 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 20 37 41 5 13 22 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 20 37 41 10 17 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 20 37 41 10 19 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 20 37 41 10 19 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 20 37 41 10 19 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 20 37 41 10 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 20 37 41 10 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 20 37 41 12 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 20 37 41 12 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 20 37 41 10 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 20 37 41 12 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 20 37 41 12 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 20 37 41 3 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 20 37 41 12 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 20 37 41 12 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 20 37 41 12 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 20 37 41 12 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 20 37 41 7 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 20 37 41 5 20 23 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 20 37 41 9 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 20 37 41 3 17 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 4 37 41 3 4 7 13 31 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 4 37 41 3 4 7 9 10 14 28 31 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 4 37 41 3 4 17 26 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 8 37 41 5 19 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 8 37 41 12 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 8 37 41 12 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 8 37 41 12 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 8 37 41 12 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 8 37 41 8 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 8 37 41 3 13 21 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 8 37 41 4 11 18 25 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 6 37 41 3 5 6 9 26 36 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 6 37 41 3 5 6 22 29 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 6 35 41 3 5 18 25 31 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 6 13 41 3 5 6 6 29 34 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 6 13 41 3 5 15 25 29 36 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 6 7 41 3 5 6 10 31 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 73.57 ( 35.22 85.48 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 20 25 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 29.27 48.78 60.98 68.29 78.05 90.24 97.56 97.56 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.63 0.85 1.03 1.39 1.78 1.99 1.99 1.99 2.18 2.18 2.18 2.18 2.18 2.18 2.18 2.18 2.18 2.18 2.18 GDT RMS_ALL_AT 2.56 2.48 2.44 2.38 2.31 2.21 2.19 2.19 2.19 2.18 2.18 2.18 2.18 2.18 2.18 2.18 2.18 2.18 2.18 2.18 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 2.018 0 0.202 0.591 3.601 33.636 35.152 3.601 LGA Q 2 Q 2 2.928 0 0.211 0.735 4.475 30.000 22.020 4.475 LGA E 3 E 3 3.215 0 0.054 1.420 9.024 22.727 11.313 9.024 LGA T 4 T 4 2.766 0 0.068 1.042 4.535 32.727 24.416 4.535 LGA R 5 R 5 1.533 0 0.063 1.191 3.004 59.091 62.645 0.601 LGA K 6 K 6 1.145 0 0.051 1.228 7.414 69.545 38.586 7.125 LGA K 7 K 7 1.307 0 0.041 0.643 3.742 65.455 42.020 3.622 LGA C 8 C 8 1.153 0 0.039 0.772 3.786 73.636 61.818 3.786 LGA T 9 T 9 0.443 0 0.044 0.103 0.732 90.909 94.805 0.463 LGA E 10 E 10 0.434 0 0.041 0.680 2.962 90.909 66.061 2.962 LGA M 11 M 11 1.007 0 0.070 0.880 2.984 73.636 62.955 2.984 LGA K 12 K 12 1.049 0 0.079 0.776 3.133 69.545 63.232 2.965 LGA K 13 K 13 0.979 0 0.040 0.608 1.482 73.636 74.545 1.167 LGA K 14 K 14 1.468 0 0.119 0.976 6.355 65.455 41.414 6.355 LGA F 15 F 15 0.863 0 0.204 0.325 2.057 77.727 69.256 1.805 LGA K 16 K 16 1.140 0 0.119 1.114 2.687 69.545 56.970 2.073 LGA N 17 N 17 0.841 0 0.068 0.344 1.555 70.000 70.000 1.555 LGA C 18 C 18 0.691 0 0.026 0.071 0.867 81.818 81.818 0.867 LGA E 19 E 19 0.583 0 0.154 0.644 2.864 86.364 72.525 2.864 LGA V 20 V 20 1.146 0 0.063 0.077 1.849 61.818 59.221 1.849 LGA R 21 R 21 1.669 0 0.068 1.297 4.695 54.545 39.504 4.158 LGA C 22 C 22 1.803 0 0.082 0.334 4.006 62.273 48.788 4.006 LGA D 23 D 23 1.608 0 0.071 0.790 3.337 58.182 47.273 1.731 LGA E 24 E 24 2.069 0 0.054 1.087 3.118 39.545 45.051 2.526 LGA S 25 S 25 3.349 0 0.579 0.541 6.159 17.727 13.636 4.200 LGA N 26 N 26 6.164 0 0.200 1.175 11.151 1.818 0.909 8.480 LGA H 27 H 27 2.366 0 0.265 0.239 7.744 42.273 18.909 7.081 LGA C 28 C 28 1.878 0 0.210 0.241 4.419 65.909 47.879 4.419 LGA V 29 V 29 1.230 0 0.070 0.085 1.910 58.182 57.143 1.599 LGA E 30 E 30 0.868 0 0.063 0.657 3.414 77.727 61.212 3.414 LGA V 31 V 31 0.828 0 0.030 0.080 0.875 81.818 81.818 0.747 LGA R 32 R 32 0.500 0 0.202 0.851 2.420 78.636 73.884 2.420 LGA C 33 C 33 1.416 0 0.503 0.569 2.949 55.909 54.242 1.987 LGA S 34 S 34 1.634 0 0.210 0.795 3.043 43.182 46.061 1.094 LGA D 35 D 35 2.557 0 0.101 0.982 3.997 35.909 28.636 3.997 LGA T 36 T 36 3.692 0 0.422 0.445 8.216 17.273 9.870 7.056 LGA K 37 K 37 3.126 0 0.134 1.430 13.184 26.364 11.717 13.184 LGA Y 38 Y 38 2.622 0 0.063 1.297 11.598 20.909 7.424 11.598 LGA T 39 T 39 3.734 0 0.165 0.155 7.212 17.727 10.130 7.203 LGA L 40 L 40 3.276 0 0.174 1.088 9.143 16.364 8.182 7.183 LGA C 41 C 41 2.958 0 0.578 1.000 7.203 35.455 22.857 7.203 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 2.180 2.163 3.474 53.803 45.022 26.475 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 40 1.99 78.659 84.764 1.909 LGA_LOCAL RMSD: 1.995 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.193 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 2.180 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.614266 * X + 0.759159 * Y + -0.215300 * Z + -5.152045 Y_new = 0.443930 * X + 0.106890 * Y + -0.889663 * Z + -4.377032 Z_new = -0.652382 * X + -0.642068 * Y + -0.402673 * Z + 1.806539 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.515794 0.710724 -2.130940 [DEG: 144.1444 40.7215 -122.0939 ] ZXZ: -0.237437 1.985231 -2.348227 [DEG: -13.6041 113.7454 -134.5435 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS471_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS471_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 40 1.99 84.764 2.18 REMARK ---------------------------------------------------------- MOLECULE T0955TS471_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT 5KVN_A 5JG9_A ATOM 1 N SER 1 -1.612 -14.231 -0.228 1.00 0.28 N ATOM 2 CA SER 1 -1.292 -14.762 1.115 1.00 0.28 C ATOM 3 CB SER 1 -0.070 -15.699 1.050 1.00 0.28 C ATOM 4 OG SER 1 1.075 -14.992 0.592 1.00 0.28 O ATOM 5 C SER 1 -1.027 -13.673 2.100 1.00 0.28 C ATOM 6 O SER 1 -1.214 -12.491 1.814 1.00 0.28 O ATOM 7 N GLN 2 -0.589 -14.073 3.306 1.00 0.39 N ATOM 8 CA GLN 2 -0.317 -13.179 4.390 1.00 0.39 C ATOM 9 CB GLN 2 0.029 -13.928 5.690 1.00 0.39 C ATOM 10 CG GLN 2 0.160 -13.031 6.922 1.00 0.39 C ATOM 11 CD GLN 2 0.351 -13.941 8.128 1.00 0.39 C ATOM 12 OE1 GLN 2 0.434 -15.160 7.990 1.00 0.39 O ATOM 13 NE2 GLN 2 0.415 -13.340 9.347 1.00 0.39 N ATOM 14 C GLN 2 0.844 -12.317 4.017 1.00 0.39 C ATOM 15 O GLN 2 0.916 -11.155 4.413 1.00 0.39 O ATOM 16 N GLU 3 1.788 -12.874 3.237 1.00 0.33 N ATOM 17 CA GLU 3 2.982 -12.163 2.879 1.00 0.33 C ATOM 18 CB GLU 3 3.913 -12.985 1.969 1.00 0.33 C ATOM 19 CG GLU 3 4.555 -14.174 2.688 1.00 0.33 C ATOM 20 CD GLU 3 5.543 -13.613 3.700 1.00 0.33 C ATOM 21 OE1 GLU 3 6.092 -12.508 3.443 1.00 0.33 O ATOM 22 OE2 GLU 3 5.764 -14.285 4.742 1.00 0.33 O ATOM 23 C GLU 3 2.618 -10.914 2.141 1.00 0.33 C ATOM 24 O GLU 3 3.244 -9.875 2.335 1.00 0.33 O ATOM 25 N THR 4 1.601 -10.979 1.262 1.00 0.26 N ATOM 26 CA THR 4 1.204 -9.815 0.521 1.00 0.26 C ATOM 27 CB THR 4 0.197 -10.101 -0.555 1.00 0.26 C ATOM 28 OG1 THR 4 -0.995 -10.633 0.005 1.00 0.26 O ATOM 29 CG2 THR 4 0.818 -11.097 -1.548 1.00 0.26 C ATOM 30 C THR 4 0.622 -8.807 1.459 1.00 0.26 C ATOM 31 O THR 4 0.755 -7.603 1.250 1.00 0.26 O ATOM 32 N ARG 5 -0.072 -9.279 2.512 1.00 0.29 N ATOM 33 CA ARG 5 -0.649 -8.366 3.453 1.00 0.29 C ATOM 34 CB ARG 5 -1.370 -9.065 4.617 1.00 0.29 C ATOM 35 CG ARG 5 -2.557 -9.933 4.202 1.00 0.29 C ATOM 36 CD ARG 5 -3.851 -9.151 3.975 1.00 0.29 C ATOM 37 NE ARG 5 -4.956 -10.148 3.982 1.00 0.29 N ATOM 38 CZ ARG 5 -5.311 -10.795 2.836 1.00 0.29 C ATOM 39 NH1 ARG 5 -4.687 -10.493 1.660 1.00 0.29 N ATOM 40 NH2 ARG 5 -6.286 -11.751 2.872 1.00 0.29 N ATOM 41 C ARG 5 0.486 -7.612 4.062 1.00 0.29 C ATOM 42 O ARG 5 0.397 -6.408 4.297 1.00 0.29 O ATOM 43 N LYS 6 1.597 -8.323 4.329 1.00 0.21 N ATOM 44 CA LYS 6 2.739 -7.709 4.933 1.00 0.21 C ATOM 45 CB LYS 6 3.915 -8.674 5.165 1.00 0.21 C ATOM 46 CG LYS 6 3.724 -9.644 6.331 1.00 0.21 C ATOM 47 CD LYS 6 4.778 -10.754 6.366 1.00 0.21 C ATOM 48 CE LYS 6 4.683 -11.661 7.593 1.00 0.21 C ATOM 49 NZ LYS 6 5.738 -12.698 7.539 1.00 0.21 N ATOM 50 C LYS 6 3.231 -6.634 4.021 1.00 0.21 C ATOM 51 O LYS 6 3.645 -5.569 4.479 1.00 0.21 O ATOM 52 N LYS 7 3.195 -6.878 2.699 1.00 0.23 N ATOM 53 CA LYS 7 3.679 -5.897 1.771 1.00 0.23 C ATOM 54 CB LYS 7 3.630 -6.359 0.305 1.00 0.23 C ATOM 55 CG LYS 7 4.769 -7.316 -0.049 1.00 0.23 C ATOM 56 CD LYS 7 4.620 -7.989 -1.413 1.00 0.23 C ATOM 57 CE LYS 7 5.834 -8.834 -1.810 1.00 0.23 C ATOM 58 NZ LYS 7 5.578 -9.504 -3.106 1.00 0.23 N ATOM 59 C LYS 7 2.856 -4.656 1.900 1.00 0.23 C ATOM 60 O LYS 7 3.376 -3.544 1.811 1.00 0.23 O ATOM 61 N CYS 8 1.541 -4.810 2.116 1.00 0.15 N ATOM 62 CA CYS 8 0.682 -3.671 2.244 1.00 0.15 C ATOM 63 CB CYS 8 -0.781 -4.086 2.446 1.00 0.15 C ATOM 64 SG CYS 8 -1.468 -4.789 0.921 1.00 0.15 S ATOM 65 C CYS 8 1.135 -2.876 3.429 1.00 0.15 C ATOM 66 O CYS 8 1.198 -1.648 3.378 1.00 0.15 O ATOM 67 N THR 9 1.488 -3.564 4.528 1.00 0.13 N ATOM 68 CA THR 9 1.927 -2.889 5.714 1.00 0.13 C ATOM 69 CB THR 9 2.253 -3.840 6.831 1.00 0.13 C ATOM 70 OG1 THR 9 1.112 -4.614 7.167 1.00 0.13 O ATOM 71 CG2 THR 9 2.728 -3.034 8.053 1.00 0.13 C ATOM 72 C THR 9 3.182 -2.144 5.392 1.00 0.13 C ATOM 73 O THR 9 3.363 -1.001 5.814 1.00 0.13 O ATOM 74 N GLU 10 4.082 -2.777 4.616 1.00 0.18 N ATOM 75 CA GLU 10 5.346 -2.177 4.295 1.00 0.18 C ATOM 76 CB GLU 10 6.230 -3.082 3.417 1.00 0.18 C ATOM 77 CG GLU 10 6.737 -4.336 4.132 1.00 0.18 C ATOM 78 CD GLU 10 7.592 -5.128 3.150 1.00 0.18 C ATOM 79 OE1 GLU 10 7.286 -5.082 1.929 1.00 0.18 O ATOM 80 OE2 GLU 10 8.563 -5.788 3.607 1.00 0.18 O ATOM 81 C GLU 10 5.113 -0.919 3.525 1.00 0.18 C ATOM 82 O GLU 10 5.744 0.104 3.787 1.00 0.18 O ATOM 83 N MET 11 4.177 -0.959 2.558 1.00 0.16 N ATOM 84 CA MET 11 3.932 0.172 1.714 1.00 0.16 C ATOM 85 CB MET 11 2.905 -0.124 0.612 1.00 0.16 C ATOM 86 CG MET 11 3.404 -1.187 -0.367 1.00 0.16 C ATOM 87 SD MET 11 4.961 -0.748 -1.192 1.00 0.16 S ATOM 88 CE MET 11 4.234 0.638 -2.108 1.00 0.16 C ATOM 89 C MET 11 3.426 1.304 2.547 1.00 0.16 C ATOM 90 O MET 11 3.792 2.459 2.332 1.00 0.16 O ATOM 91 N LYS 12 2.567 0.999 3.534 1.00 0.14 N ATOM 92 CA LYS 12 2.030 2.034 4.362 1.00 0.14 C ATOM 93 CB LYS 12 1.082 1.488 5.441 1.00 0.14 C ATOM 94 CG LYS 12 -0.170 0.828 4.865 1.00 0.14 C ATOM 95 CD LYS 12 -0.920 -0.034 5.879 1.00 0.14 C ATOM 96 CE LYS 12 -2.096 -0.808 5.280 1.00 0.14 C ATOM 97 NZ LYS 12 -2.715 -1.664 6.317 1.00 0.14 N ATOM 98 C LYS 12 3.179 2.697 5.055 1.00 0.14 C ATOM 99 O LYS 12 3.225 3.922 5.157 1.00 0.14 O ATOM 100 N LYS 13 4.144 1.895 5.545 1.00 0.16 N ATOM 101 CA LYS 13 5.278 2.454 6.222 1.00 0.16 C ATOM 102 CB LYS 13 6.260 1.404 6.771 1.00 0.16 C ATOM 103 CG LYS 13 5.763 0.616 7.982 1.00 0.16 C ATOM 104 CD LYS 13 6.717 -0.516 8.365 1.00 0.16 C ATOM 105 CE LYS 13 6.329 -1.246 9.651 1.00 0.16 C ATOM 106 NZ LYS 13 7.343 -2.276 9.970 1.00 0.16 N ATOM 107 C LYS 13 6.068 3.274 5.257 1.00 0.16 C ATOM 108 O LYS 13 6.514 4.373 5.586 1.00 0.16 O ATOM 109 N LYS 14 6.258 2.761 4.027 1.00 0.17 N ATOM 110 CA LYS 14 7.074 3.475 3.095 1.00 0.17 C ATOM 111 CB LYS 14 7.151 2.775 1.728 1.00 0.17 C ATOM 112 CG LYS 14 8.023 3.516 0.714 1.00 0.17 C ATOM 113 CD LYS 14 8.290 2.716 -0.562 1.00 0.17 C ATOM 114 CE LYS 14 9.159 3.466 -1.573 1.00 0.17 C ATOM 115 NZ LYS 14 9.387 2.630 -2.771 1.00 0.17 N ATOM 116 C LYS 14 6.463 4.820 2.872 1.00 0.17 C ATOM 117 O LYS 14 7.131 5.844 3.017 1.00 0.17 O ATOM 118 N PHE 15 5.160 4.853 2.534 1.00 0.19 N ATOM 119 CA PHE 15 4.507 6.111 2.325 1.00 0.19 C ATOM 120 CB PHE 15 3.634 6.136 1.058 1.00 0.19 C ATOM 121 CG PHE 15 4.503 5.840 -0.116 1.00 0.19 C ATOM 122 CD1 PHE 15 4.744 4.535 -0.484 1.00 0.19 C ATOM 123 CD2 PHE 15 5.074 6.853 -0.847 1.00 0.19 C ATOM 124 CE1 PHE 15 5.544 4.246 -1.566 1.00 0.19 C ATOM 125 CE2 PHE 15 5.877 6.570 -1.929 1.00 0.19 C ATOM 126 CZ PHE 15 6.109 5.265 -2.292 1.00 0.19 C ATOM 127 C PHE 15 3.577 6.264 3.480 1.00 0.19 C ATOM 128 O PHE 15 2.405 5.897 3.400 1.00 0.19 O ATOM 129 N LYS 16 4.083 6.834 4.585 1.00 0.25 N ATOM 130 CA LYS 16 3.303 6.921 5.779 1.00 0.25 C ATOM 131 CB LYS 16 4.133 7.387 6.981 1.00 0.25 C ATOM 132 CG LYS 16 3.470 7.038 8.309 1.00 0.25 C ATOM 133 CD LYS 16 4.422 7.099 9.503 1.00 0.25 C ATOM 134 CE LYS 16 4.801 8.520 9.924 1.00 0.25 C ATOM 135 NZ LYS 16 5.568 8.480 11.190 1.00 0.25 N ATOM 136 C LYS 16 2.151 7.848 5.591 1.00 0.25 C ATOM 137 O LYS 16 1.044 7.584 6.060 1.00 0.25 O ATOM 138 N ASN 17 2.394 8.985 4.923 1.00 0.27 N ATOM 139 CA ASN 17 1.367 9.958 4.710 1.00 0.27 C ATOM 140 CB ASN 17 1.917 11.299 4.197 1.00 0.27 C ATOM 141 CG ASN 17 2.648 11.948 5.358 1.00 0.27 C ATOM 142 OD1 ASN 17 2.161 11.938 6.487 1.00 0.27 O ATOM 143 ND2 ASN 17 3.854 12.516 5.084 1.00 0.27 N ATOM 144 C ASN 17 0.368 9.474 3.706 1.00 0.27 C ATOM 145 O ASN 17 -0.830 9.715 3.854 1.00 0.27 O ATOM 146 N CYS 18 0.839 8.761 2.665 1.00 0.16 N ATOM 147 CA CYS 18 0.008 8.417 1.545 1.00 0.16 C ATOM 148 CB CYS 18 0.798 7.858 0.351 1.00 0.16 C ATOM 149 SG CYS 18 1.953 9.076 -0.341 1.00 0.16 S ATOM 150 C CYS 18 -1.035 7.415 1.905 1.00 0.16 C ATOM 151 O CYS 18 -0.902 6.660 2.866 1.00 0.16 O ATOM 152 N GLU 19 -2.130 7.404 1.113 1.00 0.18 N ATOM 153 CA GLU 19 -3.193 6.480 1.365 1.00 0.18 C ATOM 154 CB GLU 19 -4.586 7.039 1.023 1.00 0.18 C ATOM 155 CG GLU 19 -5.740 6.193 1.559 1.00 0.18 C ATOM 156 CD GLU 19 -7.039 6.917 1.238 1.00 0.18 C ATOM 157 OE1 GLU 19 -7.232 7.279 0.045 1.00 0.18 O ATOM 158 OE2 GLU 19 -7.852 7.129 2.176 1.00 0.18 O ATOM 159 C GLU 19 -2.945 5.267 0.527 1.00 0.18 C ATOM 160 O GLU 19 -3.014 5.307 -0.701 1.00 0.18 O ATOM 161 N VAL 20 -2.646 4.140 1.198 1.00 0.16 N ATOM 162 CA VAL 20 -2.353 2.919 0.512 1.00 0.16 C ATOM 163 CB VAL 20 -1.315 2.089 1.212 1.00 0.16 C ATOM 164 CG1 VAL 20 -1.156 0.753 0.466 1.00 0.16 C ATOM 165 CG2 VAL 20 -0.017 2.907 1.316 1.00 0.16 C ATOM 166 C VAL 20 -3.608 2.120 0.487 1.00 0.16 C ATOM 167 O VAL 20 -4.165 1.780 1.529 1.00 0.16 O ATOM 168 N ARG 21 -4.073 1.792 -0.730 1.00 0.17 N ATOM 169 CA ARG 21 -5.296 1.069 -0.893 1.00 0.17 C ATOM 170 CB ARG 21 -6.122 1.647 -2.058 1.00 0.17 C ATOM 171 CG ARG 21 -7.455 0.954 -2.328 1.00 0.17 C ATOM 172 CD ARG 21 -8.007 1.241 -3.729 1.00 0.17 C ATOM 173 NE ARG 21 -8.615 2.601 -3.757 1.00 0.17 N ATOM 174 CZ ARG 21 -8.404 3.418 -4.832 1.00 0.17 C ATOM 175 NH1 ARG 21 -7.474 3.090 -5.776 1.00 0.17 N ATOM 176 NH2 ARG 21 -9.134 4.562 -4.973 1.00 0.17 N ATOM 177 C ARG 21 -4.933 -0.335 -1.244 1.00 0.17 C ATOM 178 O ARG 21 -4.373 -0.594 -2.308 1.00 0.17 O ATOM 179 N CYS 22 -5.236 -1.288 -0.340 1.00 0.25 N ATOM 180 CA CYS 22 -4.939 -2.651 -0.656 1.00 0.25 C ATOM 181 CB CYS 22 -4.053 -3.387 0.360 1.00 0.25 C ATOM 182 SG CYS 22 -2.287 -3.165 0.027 1.00 0.25 S ATOM 183 C CYS 22 -6.202 -3.420 -0.740 1.00 0.25 C ATOM 184 O CYS 22 -7.052 -3.374 0.150 1.00 0.25 O ATOM 185 N ASP 23 -6.349 -4.153 -1.853 1.00 0.34 N ATOM 186 CA ASP 23 -7.475 -5.007 -2.012 1.00 0.34 C ATOM 187 CB ASP 23 -7.788 -5.364 -3.476 1.00 0.34 C ATOM 188 CG ASP 23 -8.336 -4.128 -4.172 1.00 0.34 C ATOM 189 OD1 ASP 23 -9.028 -3.322 -3.494 1.00 0.34 O ATOM 190 OD2 ASP 23 -8.068 -3.971 -5.393 1.00 0.34 O ATOM 191 C ASP 23 -7.105 -6.265 -1.310 1.00 0.34 C ATOM 192 O ASP 23 -6.035 -6.382 -0.716 1.00 0.34 O ATOM 193 N GLU 24 -8.018 -7.237 -1.350 1.00 0.39 N ATOM 194 CA GLU 24 -7.811 -8.494 -0.712 1.00 0.39 C ATOM 195 CB GLU 24 -9.066 -9.370 -0.816 1.00 0.39 C ATOM 196 CG GLU 24 -9.173 -10.403 0.298 1.00 0.39 C ATOM 197 CD GLU 24 -9.547 -9.639 1.561 1.00 0.39 C ATOM 198 OE1 GLU 24 -8.753 -8.754 1.979 1.00 0.39 O ATOM 199 OE2 GLU 24 -10.640 -9.921 2.122 1.00 0.39 O ATOM 200 C GLU 24 -6.693 -9.187 -1.424 1.00 0.39 C ATOM 201 O GLU 24 -5.935 -9.948 -0.826 1.00 0.39 O ATOM 202 N SER 25 -6.577 -8.933 -2.741 1.00 0.40 N ATOM 203 CA SER 25 -5.606 -9.591 -3.569 1.00 0.40 C ATOM 204 CB SER 25 -5.748 -9.289 -5.067 1.00 0.40 C ATOM 205 OG SER 25 -6.922 -9.902 -5.572 1.00 0.40 O ATOM 206 C SER 25 -4.220 -9.209 -3.180 1.00 0.40 C ATOM 207 O SER 25 -3.979 -8.233 -2.471 1.00 0.40 O ATOM 208 N ASN 26 -3.270 -10.047 -3.632 1.00 0.41 N ATOM 209 CA ASN 26 -1.885 -9.902 -3.311 1.00 0.41 C ATOM 210 CB ASN 26 -1.055 -11.066 -3.886 1.00 0.41 C ATOM 211 CG ASN 26 -1.597 -12.383 -3.341 1.00 0.41 C ATOM 212 OD1 ASN 26 -2.185 -12.435 -2.261 1.00 0.41 O ATOM 213 ND2 ASN 26 -1.403 -13.484 -4.117 1.00 0.41 N ATOM 214 C ASN 26 -1.313 -8.649 -3.909 1.00 0.41 C ATOM 215 O ASN 26 -0.781 -7.791 -3.208 1.00 0.41 O ATOM 216 N HIS 27 -1.408 -8.539 -5.245 1.00 0.41 N ATOM 217 CA HIS 27 -0.831 -7.479 -6.023 1.00 0.41 C ATOM 218 ND1 HIS 27 1.913 -8.436 -7.491 1.00 0.41 N ATOM 219 CG HIS 27 0.596 -8.836 -7.546 1.00 0.41 C ATOM 220 CB HIS 27 -0.559 -7.883 -7.478 1.00 0.41 C ATOM 221 NE2 HIS 27 1.925 -10.656 -7.634 1.00 0.41 N ATOM 222 CD2 HIS 27 0.621 -10.193 -7.635 1.00 0.41 C ATOM 223 CE1 HIS 27 2.664 -9.564 -7.546 1.00 0.41 C ATOM 224 C HIS 27 -1.600 -6.201 -6.008 1.00 0.41 C ATOM 225 O HIS 27 -1.035 -5.154 -6.313 1.00 0.41 O ATOM 226 N CYS 28 -2.911 -6.236 -5.710 1.00 0.26 N ATOM 227 CA CYS 28 -3.688 -5.038 -5.877 1.00 0.26 C ATOM 228 CB CYS 28 -5.200 -5.292 -5.784 1.00 0.26 C ATOM 229 SG CYS 28 -5.795 -6.402 -7.095 1.00 0.26 S ATOM 230 C CYS 28 -3.354 -4.005 -4.843 1.00 0.26 C ATOM 231 O CYS 28 -4.057 -3.870 -3.843 1.00 0.26 O ATOM 232 N VAL 29 -2.294 -3.209 -5.082 1.00 0.20 N ATOM 233 CA VAL 29 -1.959 -2.173 -4.146 1.00 0.20 C ATOM 234 CB VAL 29 -0.628 -2.386 -3.487 1.00 0.20 C ATOM 235 CG1 VAL 29 -0.327 -1.178 -2.584 1.00 0.20 C ATOM 236 CG2 VAL 29 -0.659 -3.731 -2.745 1.00 0.20 C ATOM 237 C VAL 29 -1.863 -0.887 -4.901 1.00 0.20 C ATOM 238 O VAL 29 -1.128 -0.784 -5.882 1.00 0.20 O ATOM 239 N GLU 30 -2.603 0.144 -4.455 1.00 0.17 N ATOM 240 CA GLU 30 -2.530 1.393 -5.150 1.00 0.17 C ATOM 241 CB GLU 30 -3.843 1.720 -5.887 1.00 0.17 C ATOM 242 CG GLU 30 -3.705 2.721 -7.036 1.00 0.17 C ATOM 243 CD GLU 30 -4.997 2.681 -7.848 1.00 0.17 C ATOM 244 OE1 GLU 30 -5.830 1.772 -7.591 1.00 0.17 O ATOM 245 OE2 GLU 30 -5.164 3.555 -8.740 1.00 0.17 O ATOM 246 C GLU 30 -2.250 2.434 -4.110 1.00 0.17 C ATOM 247 O GLU 30 -2.933 2.505 -3.091 1.00 0.17 O ATOM 248 N VAL 31 -1.215 3.266 -4.336 1.00 0.16 N ATOM 249 CA VAL 31 -0.875 4.244 -3.344 1.00 0.16 C ATOM 250 CB VAL 31 0.595 4.262 -3.016 1.00 0.16 C ATOM 251 CG1 VAL 31 0.861 5.361 -1.976 1.00 0.16 C ATOM 252 CG2 VAL 31 1.012 2.856 -2.550 1.00 0.16 C ATOM 253 C VAL 31 -1.237 5.597 -3.873 1.00 0.16 C ATOM 254 O VAL 31 -0.876 5.958 -4.991 1.00 0.16 O ATOM 255 N ARG 32 -1.972 6.385 -3.061 1.00 0.22 N ATOM 256 CA ARG 32 -2.380 7.707 -3.452 1.00 0.22 C ATOM 257 CB ARG 32 -3.771 8.123 -2.950 1.00 0.22 C ATOM 258 CG ARG 32 -4.962 7.572 -3.717 1.00 0.22 C ATOM 259 CD ARG 32 -6.273 8.150 -3.187 1.00 0.22 C ATOM 260 NE ARG 32 -7.374 7.671 -4.064 1.00 0.22 N ATOM 261 CZ ARG 32 -8.644 8.115 -3.841 1.00 0.22 C ATOM 262 NH1 ARG 32 -8.888 8.989 -2.822 1.00 0.22 N ATOM 263 NH2 ARG 32 -9.665 7.686 -4.638 1.00 0.22 N ATOM 264 C ARG 32 -1.477 8.680 -2.778 1.00 0.22 C ATOM 265 O ARG 32 -1.270 8.622 -1.567 1.00 0.22 O ATOM 266 N CYS 33 -0.927 9.628 -3.553 1.00 0.21 N ATOM 267 CA CYS 33 -0.073 10.609 -2.959 1.00 0.21 C ATOM 268 CB CYS 33 1.252 10.798 -3.713 1.00 0.21 C ATOM 269 SG CYS 33 2.260 9.287 -3.729 1.00 0.21 S ATOM 270 C CYS 33 -0.809 11.912 -3.001 1.00 0.21 C ATOM 271 O CYS 33 -1.738 12.088 -3.787 1.00 0.21 O ATOM 272 N SER 34 -0.418 12.854 -2.123 1.00 0.35 N ATOM 273 CA SER 34 -1.040 14.146 -2.067 1.00 0.35 C ATOM 274 CB SER 34 -0.519 15.011 -0.910 1.00 0.35 C ATOM 275 OG SER 34 -1.177 16.270 -0.920 1.00 0.35 O ATOM 276 C SER 34 -0.717 14.863 -3.339 1.00 0.35 C ATOM 277 O SER 34 -1.441 15.761 -3.769 1.00 0.35 O ATOM 278 N ASP 35 0.400 14.455 -3.959 1.00 0.45 N ATOM 279 CA ASP 35 0.951 14.970 -5.178 1.00 0.45 C ATOM 280 CB ASP 35 2.357 14.423 -5.462 1.00 0.45 C ATOM 281 CG ASP 35 3.251 14.963 -4.356 1.00 0.45 C ATOM 282 OD1 ASP 35 2.892 16.022 -3.775 1.00 0.45 O ATOM 283 OD2 ASP 35 4.296 14.320 -4.068 1.00 0.45 O ATOM 284 C ASP 35 0.048 14.582 -6.305 1.00 0.45 C ATOM 285 O ASP 35 0.191 15.077 -7.421 1.00 0.45 O ATOM 286 N THR 36 -0.905 13.668 -6.039 1.00 0.48 N ATOM 287 CA THR 36 -1.786 13.170 -7.057 1.00 0.48 C ATOM 288 CB THR 36 -2.381 14.266 -7.908 1.00 0.48 C ATOM 289 OG1 THR 36 -3.028 15.220 -7.077 1.00 0.48 O ATOM 290 CG2 THR 36 -3.423 13.668 -8.875 1.00 0.48 C ATOM 291 C THR 36 -0.979 12.242 -7.911 1.00 0.48 C ATOM 292 O THR 36 -1.204 12.097 -9.111 1.00 0.48 O ATOM 293 N LYS 37 0.006 11.577 -7.276 1.00 0.43 N ATOM 294 CA LYS 37 0.795 10.598 -7.961 1.00 0.43 C ATOM 295 CB LYS 37 2.302 10.681 -7.665 1.00 0.43 C ATOM 296 CG LYS 37 2.974 11.948 -8.199 1.00 0.43 C ATOM 297 CD LYS 37 4.390 12.153 -7.656 1.00 0.43 C ATOM 298 CE LYS 37 5.081 13.414 -8.181 1.00 0.43 C ATOM 299 NZ LYS 37 6.438 13.525 -7.596 1.00 0.43 N ATOM 300 C LYS 37 0.338 9.264 -7.467 1.00 0.43 C ATOM 301 O LYS 37 -0.067 9.123 -6.314 1.00 0.43 O ATOM 302 N TYR 38 0.370 8.245 -8.346 1.00 0.37 N ATOM 303 CA TYR 38 -0.051 6.942 -7.927 1.00 0.37 C ATOM 304 CB TYR 38 -1.319 6.435 -8.645 1.00 0.37 C ATOM 305 CG TYR 38 -2.481 7.263 -8.197 1.00 0.37 C ATOM 306 CD1 TYR 38 -2.702 8.510 -8.733 1.00 0.37 C ATOM 307 CD2 TYR 38 -3.357 6.786 -7.248 1.00 0.37 C ATOM 308 CE1 TYR 38 -3.771 9.274 -8.322 1.00 0.37 C ATOM 309 CE2 TYR 38 -4.429 7.544 -6.832 1.00 0.37 C ATOM 310 CZ TYR 38 -4.635 8.793 -7.368 1.00 0.37 C ATOM 311 OH TYR 38 -5.730 9.579 -6.948 1.00 0.37 O ATOM 312 C TYR 38 1.047 5.972 -8.221 1.00 0.37 C ATOM 313 O TYR 38 1.668 6.010 -9.285 1.00 0.37 O ATOM 314 N THR 39 1.325 5.080 -7.250 1.00 0.32 N ATOM 315 CA THR 39 2.322 4.066 -7.426 1.00 0.32 C ATOM 316 CB THR 39 3.430 4.141 -6.416 1.00 0.32 C ATOM 317 OG1 THR 39 4.076 5.405 -6.486 1.00 0.32 O ATOM 318 CG2 THR 39 4.439 3.021 -6.713 1.00 0.32 C ATOM 319 C THR 39 1.621 2.757 -7.238 1.00 0.32 C ATOM 320 O THR 39 0.794 2.613 -6.338 1.00 0.32 O ATOM 321 N LEU 40 1.920 1.764 -8.100 1.00 0.37 N ATOM 322 CA LEU 40 1.257 0.497 -7.983 1.00 0.37 C ATOM 323 CB LEU 40 0.536 0.054 -9.268 1.00 0.37 C ATOM 324 CG LEU 40 -0.691 0.917 -9.626 1.00 0.37 C ATOM 325 CD1 LEU 40 -1.827 0.722 -8.610 1.00 0.37 C ATOM 326 CD2 LEU 40 -0.308 2.395 -9.798 1.00 0.37 C ATOM 327 C LEU 40 2.274 -0.546 -7.661 1.00 0.37 C ATOM 328 O LEU 40 3.417 -0.472 -8.107 1.00 0.37 O ATOM 329 N CYS 41 1.878 -1.544 -6.847 1.00 0.39 N ATOM 330 CA CYS 41 2.778 -2.606 -6.508 1.00 0.39 C ATOM 331 CB CYS 41 3.116 -2.679 -5.012 1.00 0.39 C ATOM 332 SG CYS 41 4.205 -1.328 -4.480 1.00 0.39 S ATOM 333 C CYS 41 2.127 -3.932 -6.868 1.00 0.39 C ATOM 334 O CYS 41 2.079 -4.814 -5.967 1.00 0.39 O ATOM 335 OXT CYS 41 1.685 -4.091 -8.037 1.00 0.39 O TER END