####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS378_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS378_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 1 - 20 4.52 34.81 LCS_AVERAGE: 39.44 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 1 - 18 1.92 36.67 LCS_AVERAGE: 30.64 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 2 - 17 0.98 37.31 LCS_AVERAGE: 23.38 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 18 20 3 3 8 12 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT Q 2 Q 2 16 18 20 9 13 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT E 3 E 3 16 18 20 9 13 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT T 4 T 4 16 18 20 9 13 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT R 5 R 5 16 18 20 9 13 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT K 6 K 6 16 18 20 9 13 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT K 7 K 7 16 18 20 9 13 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT C 8 C 8 16 18 20 9 13 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT T 9 T 9 16 18 20 9 13 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT E 10 E 10 16 18 20 9 13 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT M 11 M 11 16 18 20 9 13 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT K 12 K 12 16 18 20 9 13 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT K 13 K 13 16 18 20 9 13 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT K 14 K 14 16 18 20 9 13 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT F 15 F 15 16 18 20 3 12 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT K 16 K 16 16 18 20 3 3 11 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT N 17 N 17 16 18 20 3 4 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT C 18 C 18 3 18 20 3 5 7 7 8 8 10 16 18 18 18 18 18 19 19 19 19 19 19 19 LCS_GDT E 19 E 19 6 9 20 3 4 6 7 8 8 9 9 10 11 12 17 18 19 19 19 19 19 19 19 LCS_GDT V 20 V 20 6 9 20 4 5 7 7 8 8 9 9 10 11 12 13 13 13 13 13 14 14 15 15 LCS_GDT R 21 R 21 6 9 14 4 5 7 7 8 8 9 9 10 11 12 13 13 13 13 13 14 14 15 15 LCS_GDT C 22 C 22 6 9 14 4 5 7 7 8 8 9 9 10 11 12 13 13 13 13 13 14 14 15 15 LCS_GDT D 23 D 23 6 9 14 4 5 7 7 8 8 9 9 10 11 12 13 13 13 13 13 14 14 15 15 LCS_GDT E 24 E 24 6 9 14 3 5 7 7 8 8 9 9 10 11 12 13 13 13 13 13 14 14 15 15 LCS_GDT S 25 S 25 6 9 14 4 5 7 7 8 9 10 10 11 11 12 13 13 13 13 13 14 14 15 15 LCS_GDT N 26 N 26 3 8 14 3 3 4 4 8 9 10 10 11 11 11 13 13 13 13 13 14 14 15 15 LCS_GDT H 27 H 27 7 8 14 3 6 7 7 8 9 10 10 11 11 11 11 12 12 12 13 13 14 14 14 LCS_GDT C 28 C 28 7 8 13 3 6 7 7 8 9 10 10 11 11 11 11 12 12 12 12 13 13 13 13 LCS_GDT V 29 V 29 7 8 13 5 6 7 7 8 9 10 10 11 11 11 11 12 12 12 12 13 13 13 13 LCS_GDT E 30 E 30 7 8 13 5 6 7 7 8 9 10 10 11 11 11 11 12 12 12 12 13 13 13 13 LCS_GDT V 31 V 31 7 8 13 5 6 7 7 8 9 10 10 11 11 11 11 12 12 12 12 13 13 13 13 LCS_GDT R 32 R 32 7 8 13 5 6 7 7 8 9 10 10 11 11 11 11 12 12 12 12 13 13 13 13 LCS_GDT C 33 C 33 7 8 13 5 6 7 7 8 9 10 10 11 11 11 11 12 12 12 12 13 13 13 13 LCS_GDT S 34 S 34 3 8 13 3 3 3 5 8 9 10 10 11 11 11 11 12 12 12 12 13 13 13 13 LCS_GDT D 35 D 35 5 8 13 3 5 5 6 7 8 8 9 11 11 11 11 12 12 12 12 13 13 13 13 LCS_GDT T 36 T 36 5 8 13 4 5 5 6 7 8 8 8 8 8 10 10 12 12 12 12 13 13 13 13 LCS_GDT K 37 K 37 5 8 12 4 5 5 6 7 8 8 8 8 8 8 9 9 9 9 9 9 11 13 13 LCS_GDT Y 38 Y 38 5 8 9 4 5 5 6 7 8 8 8 8 8 8 9 9 9 9 9 9 9 10 10 LCS_GDT T 39 T 39 5 8 9 4 5 5 6 7 8 8 8 8 8 8 9 9 9 9 9 9 9 10 10 LCS_GDT L 40 L 40 5 8 9 3 3 5 6 7 8 8 8 8 8 8 9 9 9 9 9 9 9 10 10 LCS_GDT C 41 C 41 4 8 9 3 3 4 6 6 8 8 8 8 8 8 9 9 9 9 9 9 9 10 10 LCS_AVERAGE LCS_A: 31.15 ( 23.38 30.64 39.44 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 13 14 16 17 17 17 17 18 18 18 18 18 19 19 19 19 19 19 19 GDT PERCENT_AT 21.95 31.71 34.15 39.02 41.46 41.46 41.46 41.46 43.90 43.90 43.90 43.90 43.90 46.34 46.34 46.34 46.34 46.34 46.34 46.34 GDT RMS_LOCAL 0.25 0.50 0.59 0.98 1.32 1.32 1.32 1.32 1.92 1.92 1.92 1.92 1.92 2.98 2.98 2.98 2.98 2.98 2.98 2.98 GDT RMS_ALL_AT 37.93 37.81 37.60 37.31 37.09 37.09 37.09 37.09 36.67 36.67 36.67 36.67 36.67 35.72 35.72 35.72 35.72 35.72 35.72 35.72 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: F 15 F 15 # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 3.367 0 0.643 0.649 5.622 17.273 12.424 5.622 LGA Q 2 Q 2 1.395 0 0.119 1.147 6.647 65.909 32.929 6.647 LGA E 3 E 3 0.926 0 0.023 1.385 5.563 81.818 51.515 4.264 LGA T 4 T 4 0.715 0 0.033 0.985 2.623 81.818 67.792 2.623 LGA R 5 R 5 1.174 0 0.093 0.717 3.119 69.545 41.983 3.119 LGA K 6 K 6 1.110 0 0.022 1.271 6.747 73.636 43.636 6.747 LGA K 7 K 7 0.351 0 0.021 1.030 2.323 95.455 73.333 2.323 LGA C 8 C 8 0.841 0 0.020 0.832 3.051 81.818 71.212 3.051 LGA T 9 T 9 0.882 0 0.041 0.087 1.159 81.818 74.805 1.159 LGA E 10 E 10 0.548 0 0.080 0.687 2.900 90.909 65.253 2.900 LGA M 11 M 11 0.536 0 0.103 0.884 2.467 86.364 74.545 2.467 LGA K 12 K 12 0.141 0 0.049 0.692 4.092 100.000 74.545 4.092 LGA K 13 K 13 0.554 0 0.068 0.936 2.209 95.455 71.515 1.173 LGA K 14 K 14 0.373 0 0.153 1.188 3.879 95.455 79.192 3.879 LGA F 15 F 15 0.954 0 0.439 0.331 2.169 66.818 65.950 1.364 LGA K 16 K 16 2.252 0 0.730 1.109 4.211 33.182 30.303 3.303 LGA N 17 N 17 1.923 0 0.573 1.085 8.027 36.818 19.773 6.474 LGA C 18 C 18 6.349 0 0.148 0.863 8.709 1.364 0.909 7.437 LGA E 19 E 19 11.354 0 0.482 1.117 13.640 0.000 0.000 11.118 LGA V 20 V 20 17.573 0 0.272 1.141 20.835 0.000 0.000 19.714 LGA R 21 R 21 24.482 0 0.142 1.335 31.071 0.000 0.000 31.071 LGA C 22 C 22 31.095 0 0.362 1.188 34.348 0.000 0.000 33.281 LGA D 23 D 23 36.332 0 0.276 0.997 38.206 0.000 0.000 37.626 LGA E 24 E 24 42.423 0 0.643 1.227 48.152 0.000 0.000 47.691 LGA S 25 S 25 45.308 0 0.614 1.034 46.924 0.000 0.000 45.351 LGA N 26 N 26 46.355 0 0.688 0.920 46.355 0.000 0.000 45.077 LGA H 27 H 27 47.145 0 0.681 1.449 55.649 0.000 0.000 55.649 LGA C 28 C 28 45.794 0 0.115 0.730 46.596 0.000 0.000 45.747 LGA V 29 V 29 47.371 0 0.211 0.197 49.313 0.000 0.000 49.036 LGA E 30 E 30 45.729 0 0.177 1.144 48.202 0.000 0.000 41.540 LGA V 31 V 31 46.879 0 0.085 0.149 47.741 0.000 0.000 47.721 LGA R 32 R 32 47.036 0 0.235 1.015 53.458 0.000 0.000 53.238 LGA C 33 C 33 47.878 0 0.473 0.592 49.376 0.000 0.000 46.324 LGA S 34 S 34 49.334 0 0.177 0.759 50.553 0.000 0.000 50.492 LGA D 35 D 35 50.208 0 0.639 1.376 51.598 0.000 0.000 49.199 LGA T 36 T 36 53.394 0 0.197 1.049 57.303 0.000 0.000 53.169 LGA K 37 K 37 59.328 0 0.064 1.079 63.249 0.000 0.000 63.249 LGA Y 38 Y 38 63.166 0 0.128 0.971 66.607 0.000 0.000 66.095 LGA T 39 T 39 69.267 0 0.145 0.145 73.348 0.000 0.000 69.289 LGA L 40 L 40 73.089 0 0.172 0.912 76.686 0.000 0.000 71.169 LGA C 41 C 41 78.726 0 0.499 1.052 81.351 0.000 0.000 77.751 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 25.018 25.088 25.628 30.621 23.210 9.845 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 17 1.32 39.634 38.200 1.198 LGA_LOCAL RMSD: 1.320 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 37.091 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 25.018 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.600942 * X + -0.686044 * Y + -0.410137 * Z + -2.495504 Y_new = -0.133315 * X + 0.419907 * Y + -0.897722 * Z + -12.888041 Z_new = 0.788096 * X + 0.594156 * Y + 0.160880 * Z + -1.327006 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.218307 -0.907710 1.306366 [DEG: -12.5081 -52.0079 74.8493 ] ZXZ: -0.428548 1.409214 0.924795 [DEG: -24.5540 80.7420 52.9869 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS378_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS378_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 17 1.32 38.200 25.02 REMARK ---------------------------------------------------------- MOLECULE T0955TS378_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 N SER 1 -1.869 -13.847 -2.190 0.00 0.85 ATOM 2 CA SER 1 -2.496 -12.888 -1.327 0.00 0.85 ATOM 3 CB SER 1 -3.746 -13.553 -0.708 0.00 0.85 ATOM 4 OG SER 1 -4.805 -13.554 -1.633 0.00 0.85 ATOM 5 C SER 1 -1.706 -12.557 -0.080 0.00 0.85 ATOM 6 O SER 1 -1.632 -11.341 0.393 0.00 0.85 ATOM 7 N GLN 2 -1.080 -13.570 0.427 0.00 0.86 ATOM 8 CA GLN 2 -0.211 -13.395 1.669 0.00 0.86 ATOM 9 CB GLN 2 0.462 -14.679 2.125 0.00 0.86 ATOM 10 CG GLN 2 -0.610 -15.624 2.707 0.00 0.86 ATOM 11 CD GLN 2 -0.032 -17.004 2.824 0.00 0.86 ATOM 12 OE1 GLN 2 1.179 -17.208 2.880 0.00 0.86 ATOM 13 NE2 GLN 2 -0.863 -18.059 2.827 0.00 0.86 ATOM 14 C GLN 2 1.000 -12.600 1.410 0.00 0.86 ATOM 15 O GLN 2 1.644 -12.122 2.342 0.00 0.86 ATOM 16 N GLU 3 1.270 -12.313 0.136 0.00 0.96 ATOM 17 CA GLU 3 2.332 -11.405 -0.339 0.00 0.96 ATOM 18 CB GLU 3 2.769 -11.740 -1.760 0.00 0.96 ATOM 19 CG GLU 3 3.323 -13.133 -1.912 0.00 0.96 ATOM 20 CD GLU 3 4.828 -13.146 -2.015 0.00 0.96 ATOM 21 OE1 GLU 3 5.468 -12.202 -1.503 0.00 0.96 ATOM 22 OE2 GLU 3 5.369 -14.101 -2.610 0.00 0.96 ATOM 23 C GLU 3 1.848 -9.977 -0.441 0.00 0.96 ATOM 24 O GLU 3 2.638 -9.059 -0.252 0.00 0.96 ATOM 25 N THR 4 0.550 -9.774 -0.665 0.00 0.24 ATOM 26 CA THR 4 -0.007 -8.417 -0.746 0.00 0.24 ATOM 27 CB THR 4 -1.289 -8.409 -1.610 0.00 0.24 ATOM 28 OG1 THR 4 -2.397 -9.004 -0.941 0.00 0.24 ATOM 29 CG2 THR 4 -1.059 -9.343 -2.826 0.00 0.24 ATOM 30 C THR 4 0.004 -7.754 0.605 0.00 0.24 ATOM 31 O THR 4 0.445 -6.603 0.670 0.00 0.24 ATOM 32 N ARG 5 -0.372 -8.438 1.676 0.00 0.96 ATOM 33 CA ARG 5 -0.361 -7.957 3.001 0.00 0.96 ATOM 34 CB ARG 5 -1.035 -8.952 3.982 0.00 0.96 ATOM 35 CG ARG 5 -1.396 -8.272 5.310 0.00 0.96 ATOM 36 CD ARG 5 -2.173 -9.271 6.179 0.00 0.96 ATOM 37 NE ARG 5 -3.514 -9.468 5.594 0.00 0.96 ATOM 38 CZ ARG 5 -4.293 -10.515 5.896 0.00 0.96 ATOM 39 NH1 ARG 5 -3.778 -11.412 6.753 0.00 0.96 ATOM 40 NH2 ARG 5 -5.504 -10.630 5.341 0.00 0.96 ATOM 41 C ARG 5 0.962 -7.537 3.452 0.00 0.96 ATOM 42 O ARG 5 1.025 -6.440 4.018 0.00 0.96 ATOM 43 N LYS 6 2.033 -8.301 3.234 0.00 0.27 ATOM 44 CA LYS 6 3.408 -7.987 3.576 0.00 0.27 ATOM 45 CB LYS 6 4.318 -9.217 3.454 0.00 0.27 ATOM 46 CG LYS 6 3.827 -10.411 4.253 0.00 0.27 ATOM 47 CD LYS 6 4.978 -11.255 4.786 0.00 0.27 ATOM 48 CE LYS 6 4.461 -12.265 5.802 0.00 0.27 ATOM 49 NZ LYS 6 5.486 -13.261 6.212 0.00 0.27 ATOM 50 C LYS 6 3.780 -6.618 2.978 0.00 0.27 ATOM 51 O LYS 6 4.359 -5.804 3.693 0.00 0.27 ATOM 52 N LYS 7 3.406 -6.348 1.734 0.00 0.10 ATOM 53 CA LYS 7 3.640 -5.108 1.030 0.00 0.10 ATOM 54 CB LYS 7 3.252 -5.185 -0.446 0.00 0.10 ATOM 55 CG LYS 7 3.957 -6.219 -1.319 0.00 0.10 ATOM 56 CD LYS 7 3.527 -6.069 -2.795 0.00 0.10 ATOM 57 CE LYS 7 3.927 -4.655 -3.273 0.00 0.10 ATOM 58 NZ LYS 7 3.518 -4.536 -4.689 0.00 0.10 ATOM 59 C LYS 7 2.858 -3.950 1.604 0.00 0.10 ATOM 60 O LYS 7 3.334 -2.820 1.571 0.00 0.10 ATOM 61 N CYS 8 1.674 -4.215 2.156 0.00 0.29 ATOM 62 CA CYS 8 0.878 -3.145 2.714 0.00 0.29 ATOM 63 CB CYS 8 -0.600 -3.529 2.707 0.00 0.29 ATOM 64 SG CYS 8 -1.240 -3.926 1.050 0.00 0.29 ATOM 65 C CYS 8 1.488 -2.583 3.989 0.00 0.29 ATOM 66 O CYS 8 1.597 -1.360 4.117 0.00 0.29 ATOM 67 N THR 9 1.961 -3.441 4.881 0.00 0.28 ATOM 68 CA THR 9 2.596 -3.048 6.100 0.00 0.28 ATOM 69 CB THR 9 2.987 -4.276 6.957 0.00 0.28 ATOM 70 OG1 THR 9 1.801 -5.007 7.294 0.00 0.28 ATOM 71 CG2 THR 9 3.668 -3.835 8.236 0.00 0.28 ATOM 72 C THR 9 3.848 -2.095 5.819 0.00 0.28 ATOM 73 O THR 9 4.072 -1.032 6.376 0.00 0.28 ATOM 74 N GLU 10 4.698 -2.658 4.960 0.00 0.58 ATOM 75 CA GLU 10 5.937 -1.888 4.662 0.00 0.58 ATOM 76 CB GLU 10 6.891 -2.697 3.795 0.00 0.58 ATOM 77 CG GLU 10 7.607 -3.791 4.554 0.00 0.58 ATOM 78 CD GLU 10 8.455 -4.667 3.664 0.00 0.58 ATOM 79 OE1 GLU 10 8.082 -4.859 2.499 0.00 0.58 ATOM 80 OE2 GLU 10 9.496 -5.179 4.120 0.00 0.58 ATOM 81 C GLU 10 5.645 -0.567 3.954 0.00 0.58 ATOM 82 O GLU 10 6.399 0.391 4.104 0.00 0.58 ATOM 83 N MET 11 4.548 -0.515 3.210 0.00 0.82 ATOM 84 CA MET 11 4.172 0.665 2.472 0.00 0.82 ATOM 85 CB MET 11 3.282 0.167 1.333 0.00 0.82 ATOM 86 CG MET 11 3.866 -0.962 0.499 0.00 0.82 ATOM 87 SD MET 11 5.271 -0.433 -0.473 0.00 0.82 ATOM 88 CE MET 11 4.499 0.827 -1.442 0.00 0.82 ATOM 89 C MET 11 3.719 1.784 3.347 0.00 0.82 ATOM 90 O MET 11 4.156 2.935 3.224 0.00 0.82 ATOM 91 N LYS 12 2.800 1.453 4.254 0.00 0.60 ATOM 92 CA LYS 12 2.255 2.482 5.183 0.00 0.60 ATOM 93 CB LYS 12 0.963 1.958 5.826 0.00 0.60 ATOM 94 CG LYS 12 -0.078 1.516 4.811 0.00 0.60 ATOM 95 CD LYS 12 -1.497 1.765 5.305 0.00 0.60 ATOM 96 CE LYS 12 -2.490 1.575 4.163 0.00 0.60 ATOM 97 NZ LYS 12 -3.907 1.596 4.612 0.00 0.60 ATOM 98 C LYS 12 3.290 3.127 6.033 0.00 0.60 ATOM 99 O LYS 12 3.210 4.332 6.243 0.00 0.60 ATOM 100 N LYS 13 4.251 2.358 6.532 0.00 0.78 ATOM 101 CA LYS 13 5.402 2.838 7.328 0.00 0.78 ATOM 102 CB LYS 13 6.090 1.635 7.913 0.00 0.78 ATOM 103 CG LYS 13 7.097 1.822 9.028 0.00 0.78 ATOM 104 CD LYS 13 7.763 0.466 9.344 0.00 0.78 ATOM 105 CE LYS 13 6.798 -0.580 9.870 0.00 0.78 ATOM 106 NZ LYS 13 7.187 -1.961 9.490 0.00 0.78 ATOM 107 C LYS 13 6.325 3.815 6.545 0.00 0.78 ATOM 108 O LYS 13 6.884 4.758 7.097 0.00 0.78 ATOM 109 N LYS 14 6.490 3.540 5.252 0.00 0.73 ATOM 110 CA LYS 14 7.402 4.382 4.503 0.00 0.73 ATOM 111 CB LYS 14 7.838 3.701 3.179 0.00 0.73 ATOM 112 CG LYS 14 8.322 2.256 3.361 0.00 0.73 ATOM 113 CD LYS 14 9.236 1.828 2.222 0.00 0.73 ATOM 114 CE LYS 14 8.421 1.439 0.983 0.00 0.73 ATOM 115 NZ LYS 14 9.146 1.797 -0.291 0.00 0.73 ATOM 116 C LYS 14 6.891 5.573 3.929 0.00 0.73 ATOM 117 O LYS 14 7.721 6.347 3.451 0.00 0.73 ATOM 118 N PHE 15 5.634 5.931 4.185 0.00 0.00 ATOM 119 CA PHE 15 4.868 7.107 3.622 0.00 0.00 ATOM 120 CB PHE 15 4.068 6.958 2.317 0.00 0.00 ATOM 121 CG PHE 15 4.886 6.581 1.122 0.00 0.00 ATOM 122 CD1 PHE 15 5.644 7.535 0.452 0.00 0.00 ATOM 123 CD2 PHE 15 4.887 5.274 0.655 0.00 0.00 ATOM 124 CE1 PHE 15 6.396 7.192 -0.661 0.00 0.00 ATOM 125 CE2 PHE 15 5.634 4.920 -0.459 0.00 0.00 ATOM 126 CZ PHE 15 6.391 5.881 -1.119 0.00 0.00 ATOM 127 C PHE 15 3.880 7.549 4.605 0.00 0.00 ATOM 128 O PHE 15 3.274 6.714 5.270 0.00 0.00 ATOM 129 N LYS 16 3.658 8.852 4.692 0.00 0.67 ATOM 130 CA LYS 16 2.559 9.381 5.590 0.00 0.67 ATOM 131 CB LYS 16 3.130 9.708 6.959 0.00 0.67 ATOM 132 CG LYS 16 2.069 10.302 7.866 0.00 0.67 ATOM 133 CD LYS 16 2.613 10.758 9.177 0.00 0.67 ATOM 134 CE LYS 16 1.568 11.569 9.916 0.00 0.67 ATOM 135 NZ LYS 16 2.101 12.080 11.225 0.00 0.67 ATOM 136 C LYS 16 1.951 10.478 4.690 0.00 0.67 ATOM 137 O LYS 16 2.634 11.026 3.820 0.00 0.67 ATOM 138 N ASN 17 0.710 10.857 4.967 0.00 0.49 ATOM 139 CA ASN 17 0.074 11.884 4.176 0.00 0.49 ATOM 140 CB ASN 17 -1.362 12.105 4.629 0.00 0.49 ATOM 141 CG ASN 17 -2.240 12.616 3.502 0.00 0.49 ATOM 142 OD1 ASN 17 -2.101 12.168 2.361 0.00 0.49 ATOM 143 ND2 ASN 17 -3.107 13.571 3.789 0.00 0.49 ATOM 144 C ASN 17 0.615 13.248 4.068 0.00 0.49 ATOM 145 O ASN 17 0.487 14.023 5.013 0.00 0.49 ATOM 146 N CYS 18 1.293 13.559 2.969 0.00 0.71 ATOM 147 CA CYS 18 1.869 15.036 2.985 0.00 0.71 ATOM 148 CB CYS 18 3.360 14.767 3.225 0.00 0.71 ATOM 149 SG CYS 18 4.483 16.147 3.043 0.00 0.71 ATOM 150 C CYS 18 1.394 15.911 1.850 0.00 0.71 ATOM 151 O CYS 18 1.653 15.336 0.791 0.00 0.71 ATOM 152 N GLU 19 0.878 17.134 1.894 0.00 0.07 ATOM 153 CA GLU 19 0.708 17.680 0.487 0.00 0.07 ATOM 154 CB GLU 19 -0.701 18.232 0.653 0.00 0.07 ATOM 155 CG GLU 19 -1.751 17.162 0.705 0.00 0.07 ATOM 156 CD GLU 19 -3.088 17.710 1.137 0.00 0.07 ATOM 157 OE1 GLU 19 -3.221 18.128 2.311 0.00 0.07 ATOM 158 OE2 GLU 19 -4.009 17.729 0.294 0.00 0.07 ATOM 159 C GLU 19 1.935 18.318 -0.213 0.00 0.07 ATOM 160 O GLU 19 2.911 17.624 -0.501 0.00 0.07 ATOM 161 N VAL 20 1.876 19.615 -0.513 0.00 0.85 ATOM 162 CA VAL 20 3.030 20.258 -1.074 0.00 0.85 ATOM 163 CB VAL 20 3.176 19.861 -2.589 0.00 0.85 ATOM 164 CG1 VAL 20 2.092 20.525 -3.425 0.00 0.85 ATOM 165 CG2 VAL 20 4.563 20.219 -3.127 0.00 0.85 ATOM 166 C VAL 20 3.322 21.664 -0.702 0.00 0.85 ATOM 167 O VAL 20 2.651 22.177 0.196 0.00 0.85 ATOM 168 N ARG 21 4.320 22.305 -1.305 0.00 0.78 ATOM 169 CA ARG 21 4.662 23.685 -1.014 0.00 0.78 ATOM 170 CB ARG 21 5.947 23.681 -0.185 0.00 0.78 ATOM 171 CG ARG 21 5.854 22.949 1.147 0.00 0.78 ATOM 172 CD ARG 21 5.024 23.700 2.172 0.00 0.78 ATOM 173 NE ARG 21 5.651 24.993 2.470 0.00 0.78 ATOM 174 CZ ARG 21 5.043 25.930 3.186 0.00 0.78 ATOM 175 NH1 ARG 21 3.834 25.712 3.652 0.00 0.78 ATOM 176 NH2 ARG 21 5.651 27.083 3.425 0.00 0.78 ATOM 177 C ARG 21 4.726 24.507 -2.337 0.00 0.78 ATOM 178 O ARG 21 4.794 23.922 -3.440 0.00 0.78 ATOM 179 N CYS 22 4.780 25.828 -2.200 0.00 0.07 ATOM 180 CA CYS 22 5.042 26.609 -3.393 0.00 0.07 ATOM 181 CB CYS 22 3.837 27.444 -3.806 0.00 0.07 ATOM 182 SG CYS 22 4.216 28.694 -5.057 0.00 0.07 ATOM 183 C CYS 22 5.975 27.799 -3.217 0.00 0.07 ATOM 184 O CYS 22 5.704 29.002 -3.145 0.00 0.07 ATOM 185 N ASP 23 7.214 27.321 -3.218 0.00 0.52 ATOM 186 CA ASP 23 8.588 28.060 -3.300 0.00 0.52 ATOM 187 CB ASP 23 9.521 27.352 -2.300 0.00 0.52 ATOM 188 CG ASP 23 10.833 28.121 -2.039 0.00 0.52 ATOM 189 OD1 ASP 23 10.983 29.285 -2.476 0.00 0.52 ATOM 190 OD2 ASP 23 11.728 27.547 -1.388 0.00 0.52 ATOM 191 C ASP 23 9.060 28.401 -4.726 0.00 0.52 ATOM 192 O ASP 23 9.327 27.517 -5.544 0.00 0.52 ATOM 193 N GLU 24 9.133 29.696 -5.006 0.00 0.19 ATOM 194 CA GLU 24 9.612 30.142 -6.290 0.00 0.19 ATOM 195 CB GLU 24 8.742 31.373 -6.436 0.00 0.19 ATOM 196 CG GLU 24 8.800 32.034 -7.721 0.00 0.19 ATOM 197 CD GLU 24 7.782 33.088 -7.760 0.00 0.19 ATOM 198 OE1 GLU 24 6.644 32.779 -8.138 0.00 0.19 ATOM 199 OE2 GLU 24 8.099 34.223 -7.378 0.00 0.19 ATOM 200 C GLU 24 11.103 30.309 -6.374 0.00 0.19 ATOM 201 O GLU 24 11.746 30.433 -5.329 0.00 0.19 ATOM 202 N SER 25 11.674 30.333 -7.585 0.00 0.17 ATOM 203 CA SER 25 13.121 30.487 -7.741 0.00 0.17 ATOM 204 CB SER 25 13.705 29.568 -8.821 0.00 0.17 ATOM 205 OG SER 25 13.062 29.814 -10.057 0.00 0.17 ATOM 206 C SER 25 13.443 31.817 -8.370 0.00 0.17 ATOM 207 O SER 25 12.650 32.307 -9.182 0.00 0.17 ATOM 208 N ASN 26 14.580 32.417 -8.024 0.00 0.25 ATOM 209 CA ASN 26 14.918 33.711 -8.612 0.00 0.25 ATOM 210 CB ASN 26 16.050 34.319 -7.798 0.00 0.25 ATOM 211 CG ASN 26 15.636 34.859 -6.440 0.00 0.25 ATOM 212 OD1 ASN 26 15.974 34.296 -5.386 0.00 0.25 ATOM 213 ND2 ASN 26 14.904 35.973 -6.426 0.00 0.25 ATOM 214 C ASN 26 15.377 33.660 -9.926 0.00 0.25 ATOM 215 O ASN 26 15.730 32.570 -10.381 0.00 0.25 ATOM 216 N HIS 27 15.529 34.764 -10.636 0.00 0.04 ATOM 217 CA HIS 27 15.240 34.632 -12.256 0.00 0.04 ATOM 218 CB HIS 27 14.177 35.732 -12.403 0.00 0.04 ATOM 219 CG HIS 27 14.610 37.063 -11.860 0.00 0.04 ATOM 220 ND1 HIS 27 14.058 37.623 -10.728 0.00 0.04 ATOM 221 CD2 HIS 27 15.572 37.924 -12.272 0.00 0.04 ATOM 222 CE1 HIS 27 14.661 38.770 -10.466 0.00 0.04 ATOM 223 NE2 HIS 27 15.585 38.976 -11.387 0.00 0.04 ATOM 224 C HIS 27 16.488 35.188 -12.965 0.00 0.04 ATOM 225 O HIS 27 17.581 35.119 -12.397 0.00 0.04 ATOM 226 N CYS 28 16.369 35.478 -14.257 0.00 0.91 ATOM 227 CA CYS 28 17.399 35.813 -15.159 0.00 0.91 ATOM 228 CB CYS 28 17.580 34.523 -15.981 0.00 0.91 ATOM 229 SG CYS 28 18.838 34.624 -17.267 0.00 0.91 ATOM 230 C CYS 28 17.366 37.161 -15.778 0.00 0.91 ATOM 231 O CYS 28 16.194 37.308 -16.187 0.00 0.91 ATOM 232 N VAL 29 18.376 37.944 -16.143 0.00 0.25 ATOM 233 CA VAL 29 18.099 38.900 -17.202 0.00 0.25 ATOM 234 CB VAL 29 18.137 40.288 -16.561 0.00 0.25 ATOM 235 CG1 VAL 29 18.225 41.354 -17.639 0.00 0.25 ATOM 236 CG2 VAL 29 16.896 40.496 -15.723 0.00 0.25 ATOM 237 C VAL 29 19.217 38.583 -18.041 0.00 0.25 ATOM 238 O VAL 29 20.329 38.392 -17.547 0.00 0.25 ATOM 239 N GLU 30 18.976 38.506 -19.348 0.00 0.97 ATOM 240 CA GLU 30 19.930 38.108 -20.404 0.00 0.97 ATOM 241 CB GLU 30 19.264 37.355 -21.558 0.00 0.97 ATOM 242 CG GLU 30 18.972 35.893 -21.279 0.00 0.97 ATOM 243 CD GLU 30 17.836 35.356 -22.134 0.00 0.97 ATOM 244 OE1 GLU 30 17.668 35.842 -23.277 0.00 0.97 ATOM 245 OE2 GLU 30 17.110 34.454 -21.667 0.00 0.97 ATOM 246 C GLU 30 21.004 39.155 -20.950 0.00 0.97 ATOM 247 O GLU 30 20.365 40.033 -21.534 0.00 0.97 ATOM 248 N VAL 31 22.330 39.096 -20.977 0.00 0.41 ATOM 249 CA VAL 31 22.716 40.250 -21.875 0.00 0.41 ATOM 250 CB VAL 31 23.648 41.031 -20.914 0.00 0.41 ATOM 251 CG1 VAL 31 24.456 42.057 -21.678 0.00 0.41 ATOM 252 CG2 VAL 31 22.837 41.717 -19.839 0.00 0.41 ATOM 253 C VAL 31 23.605 39.552 -23.005 0.00 0.41 ATOM 254 O VAL 31 24.255 38.525 -22.812 0.00 0.41 ATOM 255 N ARG 32 23.525 40.139 -24.195 0.00 0.57 ATOM 256 CA ARG 32 24.316 39.707 -25.293 0.00 0.57 ATOM 257 CB ARG 32 23.372 39.463 -26.477 0.00 0.57 ATOM 258 CG ARG 32 24.098 39.026 -27.759 0.00 0.57 ATOM 259 CD ARG 32 23.047 38.652 -28.752 0.00 0.57 ATOM 260 NE ARG 32 23.421 38.141 -30.041 0.00 0.57 ATOM 261 CZ ARG 32 23.364 38.778 -31.214 0.00 0.57 ATOM 262 NH1 ARG 32 23.117 40.082 -31.280 0.00 0.57 ATOM 263 NH2 ARG 32 23.550 38.077 -32.335 0.00 0.57 ATOM 264 C ARG 32 25.527 40.826 -25.404 0.00 0.57 ATOM 265 O ARG 32 25.408 42.035 -25.202 0.00 0.57 ATOM 266 N CYS 33 26.679 40.270 -25.756 0.00 0.44 ATOM 267 CA CYS 33 27.810 41.084 -25.945 0.00 0.44 ATOM 268 CB CYS 33 29.003 40.190 -26.350 0.00 0.44 ATOM 269 SG CYS 33 29.572 38.996 -25.098 0.00 0.44 ATOM 270 C CYS 33 27.737 42.006 -27.079 0.00 0.44 ATOM 271 O CYS 33 27.099 41.745 -28.096 0.00 0.44 ATOM 272 N SER 34 28.330 43.172 -26.897 0.00 0.97 ATOM 273 CA SER 34 28.251 44.437 -27.694 0.00 0.97 ATOM 274 CB SER 34 27.446 45.623 -27.162 0.00 0.97 ATOM 275 OG SER 34 27.531 46.712 -28.066 0.00 0.97 ATOM 276 C SER 34 29.076 44.680 -29.042 0.00 0.97 ATOM 277 O SER 34 28.943 44.212 -30.174 0.00 0.97 ATOM 278 N ASP 35 30.054 45.527 -28.732 0.00 0.76 ATOM 279 CA ASP 35 31.075 45.730 -29.941 0.00 0.76 ATOM 280 CB ASP 35 30.654 47.111 -30.462 0.00 0.76 ATOM 281 CG ASP 35 31.026 47.304 -31.936 0.00 0.76 ATOM 282 OD1 ASP 35 32.107 47.867 -32.239 0.00 0.76 ATOM 283 OD2 ASP 35 30.246 46.857 -32.804 0.00 0.76 ATOM 284 C ASP 35 32.412 46.316 -29.294 0.00 0.76 ATOM 285 O ASP 35 32.440 47.152 -28.391 0.00 0.76 ATOM 286 N THR 36 33.489 45.895 -29.959 0.00 0.18 ATOM 287 CA THR 36 34.807 46.212 -29.529 0.00 0.18 ATOM 288 CB THR 36 35.678 45.546 -30.619 0.00 0.18 ATOM 289 OG1 THR 36 35.724 46.359 -31.800 0.00 0.18 ATOM 290 CG2 THR 36 35.129 44.176 -31.032 0.00 0.18 ATOM 291 C THR 36 35.480 47.467 -29.220 0.00 0.18 ATOM 292 O THR 36 34.972 48.552 -29.485 0.00 0.18 ATOM 293 N LYS 37 36.575 47.334 -28.484 0.00 0.83 ATOM 294 CA LYS 37 37.406 48.450 -27.885 0.00 0.83 ATOM 295 CB LYS 37 37.021 48.718 -26.440 0.00 0.83 ATOM 296 CG LYS 37 37.803 49.889 -25.877 0.00 0.83 ATOM 297 CD LYS 37 37.552 50.108 -24.422 0.00 0.83 ATOM 298 CE LYS 37 38.548 51.109 -23.871 0.00 0.83 ATOM 299 NZ LYS 37 38.350 51.320 -22.397 0.00 0.83 ATOM 300 C LYS 37 38.937 48.027 -28.032 0.00 0.83 ATOM 301 O LYS 37 39.349 46.901 -27.746 0.00 0.83 ATOM 302 N TYR 38 39.715 49.019 -28.436 0.00 0.49 ATOM 303 CA TYR 38 41.104 48.902 -28.646 0.00 0.49 ATOM 304 CB TYR 38 41.512 48.458 -30.054 0.00 0.49 ATOM 305 CG TYR 38 43.009 48.328 -30.287 0.00 0.49 ATOM 306 CD1 TYR 38 43.878 47.957 -29.256 0.00 0.49 ATOM 307 CD2 TYR 38 43.549 48.536 -31.563 0.00 0.49 ATOM 308 CE1 TYR 38 45.254 47.792 -29.493 0.00 0.49 ATOM 309 CE2 TYR 38 44.915 48.374 -31.804 0.00 0.49 ATOM 310 CZ TYR 38 45.758 48.005 -30.770 0.00 0.49 ATOM 311 OH TYR 38 47.103 47.860 -31.015 0.00 0.49 ATOM 312 C TYR 38 41.577 50.191 -28.138 0.00 0.49 ATOM 313 O TYR 38 40.850 51.181 -28.347 0.00 0.49 ATOM 314 N THR 39 42.749 50.265 -27.510 0.00 0.12 ATOM 315 CA THR 39 43.257 51.567 -27.033 0.00 0.12 ATOM 316 CB THR 39 44.619 51.187 -26.390 0.00 0.12 ATOM 317 OG1 THR 39 44.281 50.377 -25.244 0.00 0.12 ATOM 318 CG2 THR 39 45.363 52.481 -26.005 0.00 0.12 ATOM 319 C THR 39 43.519 52.432 -28.352 0.00 0.12 ATOM 320 O THR 39 44.009 51.948 -29.362 0.00 0.12 ATOM 321 N LEU 40 43.226 53.731 -28.249 0.00 0.25 ATOM 322 CA LEU 40 43.459 54.510 -29.413 0.00 0.25 ATOM 323 CB LEU 40 42.889 55.890 -29.107 0.00 0.25 ATOM 324 CG LEU 40 41.378 55.960 -28.896 0.00 0.25 ATOM 325 CD1 LEU 40 40.983 57.365 -28.467 0.00 0.25 ATOM 326 CD2 LEU 40 40.640 55.554 -30.171 0.00 0.25 ATOM 327 C LEU 40 44.842 54.594 -29.964 0.00 0.25 ATOM 328 O LEU 40 45.783 54.463 -29.160 0.00 0.25 ATOM 329 N CYS 41 45.016 54.840 -31.261 0.00 0.77 ATOM 330 CA CYS 41 46.382 54.965 -31.799 0.00 0.77 ATOM 331 CB CYS 41 46.235 54.962 -33.341 0.00 0.77 ATOM 332 SG CYS 41 45.671 53.405 -34.121 0.00 0.77 ATOM 333 C CYS 41 46.970 56.301 -31.120 0.00 0.77 ATOM 334 O CYS 41 46.298 57.308 -30.954 0.00 0.77 ATOM 335 OXT CYS 41 48.268 56.245 -30.808 0.00 0.77 TER END