####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS337_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS337_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 4.44 4.44 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 25 - 41 1.52 5.25 LCS_AVERAGE: 35.75 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 27 - 41 0.89 5.75 LCS_AVERAGE: 24.45 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 4 41 0 3 3 3 3 4 5 6 10 18 28 31 36 37 38 39 40 40 41 41 LCS_GDT Q 2 Q 2 3 4 41 0 3 3 3 3 4 5 6 10 24 27 34 36 37 38 39 40 40 41 41 LCS_GDT E 3 E 3 3 4 41 0 3 3 3 4 4 6 6 10 25 28 33 36 37 38 39 40 40 41 41 LCS_GDT T 4 T 4 3 4 41 3 3 4 4 4 4 8 11 21 24 27 34 36 37 38 39 40 40 41 41 LCS_GDT R 5 R 5 3 16 41 3 3 4 4 4 15 21 23 25 27 31 34 36 37 38 39 40 40 41 41 LCS_GDT K 6 K 6 10 16 41 4 10 15 18 20 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT K 7 K 7 10 16 41 4 11 14 18 20 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT C 8 C 8 10 16 41 8 12 15 18 20 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT T 9 T 9 10 16 41 8 12 15 18 20 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT E 10 E 10 10 16 41 8 12 15 18 20 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT M 11 M 11 10 16 41 8 12 15 18 20 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT K 12 K 12 10 16 41 8 12 15 18 20 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT K 13 K 13 10 16 41 8 12 15 18 20 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT K 14 K 14 10 16 41 8 12 15 18 20 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT F 15 F 15 10 16 41 8 12 15 18 20 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT K 16 K 16 9 16 41 3 3 4 14 18 22 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT N 17 N 17 4 16 41 3 12 17 20 22 24 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT C 18 C 18 7 16 41 5 15 18 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT E 19 E 19 7 16 41 4 15 18 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT V 20 V 20 7 16 41 4 15 18 20 22 23 27 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT R 21 R 21 7 10 41 4 15 18 20 22 23 26 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT C 22 C 22 7 10 41 4 15 18 20 22 23 24 28 29 34 35 36 36 36 38 39 40 40 41 41 LCS_GDT D 23 D 23 7 10 41 3 8 17 20 22 23 24 25 29 33 35 36 36 36 36 38 40 40 41 41 LCS_GDT E 24 E 24 7 10 41 3 5 12 20 22 22 24 24 25 28 31 36 36 36 36 36 37 38 41 41 LCS_GDT S 25 S 25 4 17 41 3 5 11 20 22 23 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT N 26 N 26 5 17 41 3 5 7 9 12 24 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT H 27 H 27 15 17 41 3 10 16 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT C 28 C 28 15 17 41 3 14 18 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT V 29 V 29 15 17 41 5 15 18 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT E 30 E 30 15 17 41 5 15 18 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT V 31 V 31 15 17 41 6 15 18 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT R 32 R 32 15 17 41 5 15 18 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT C 33 C 33 15 17 41 5 15 18 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT S 34 S 34 15 17 41 3 15 18 20 22 24 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT D 35 D 35 15 17 41 5 15 18 20 22 24 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT T 36 T 36 15 17 41 5 15 18 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT K 37 K 37 15 17 41 5 15 18 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT Y 38 Y 38 15 17 41 5 15 18 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT T 39 T 39 15 17 41 8 15 18 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT L 40 L 40 15 17 41 5 15 18 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_GDT C 41 C 41 15 17 41 4 15 18 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 LCS_AVERAGE LCS_A: 53.40 ( 24.45 35.75 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 15 18 20 22 25 29 32 33 34 35 36 36 37 38 39 40 40 41 41 GDT PERCENT_AT 19.51 36.59 43.90 48.78 53.66 60.98 70.73 78.05 80.49 82.93 85.37 87.80 87.80 90.24 92.68 95.12 97.56 97.56 100.00 100.00 GDT RMS_LOCAL 0.27 0.64 0.83 0.99 1.19 2.16 2.42 2.61 2.71 2.88 3.07 3.31 3.31 3.70 3.86 4.01 4.19 4.19 4.44 4.44 GDT RMS_ALL_AT 6.02 7.57 6.79 7.27 7.43 4.66 4.61 4.55 4.54 4.56 4.63 4.75 4.75 4.51 4.55 4.50 4.46 4.46 4.44 4.44 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: F 15 F 15 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 9.613 0 0.259 0.373 11.592 0.000 0.000 7.240 LGA Q 2 Q 2 8.927 0 0.668 1.217 9.635 0.000 0.000 9.635 LGA E 3 E 3 9.026 0 0.660 1.337 14.635 0.000 0.000 14.635 LGA T 4 T 4 9.173 0 0.610 1.354 11.016 0.000 0.000 11.016 LGA R 5 R 5 7.989 0 0.653 0.859 18.481 0.000 0.000 18.481 LGA K 6 K 6 1.946 0 0.597 1.210 9.241 33.182 19.798 9.241 LGA K 7 K 7 2.912 0 0.050 0.668 3.745 25.000 20.606 2.566 LGA C 8 C 8 2.900 0 0.077 0.672 4.178 27.273 23.636 4.178 LGA T 9 T 9 2.757 0 0.047 1.052 5.103 30.000 20.519 5.103 LGA E 10 E 10 2.834 0 0.047 0.411 4.367 32.727 20.808 4.367 LGA M 11 M 11 1.816 0 0.094 0.959 2.739 47.727 48.182 2.739 LGA K 12 K 12 1.140 0 0.058 1.030 5.818 65.455 45.657 5.818 LGA K 13 K 13 1.767 0 0.041 1.018 5.963 47.727 30.909 5.802 LGA K 14 K 14 2.161 0 0.050 1.292 9.512 44.545 24.242 9.512 LGA F 15 F 15 1.570 0 0.472 0.419 3.720 39.545 31.570 3.495 LGA K 16 K 16 3.575 0 0.618 1.300 5.885 29.545 16.768 3.906 LGA N 17 N 17 3.456 0 0.657 0.680 7.618 28.636 14.318 6.435 LGA C 18 C 18 2.946 0 0.056 0.853 6.070 20.909 16.970 6.070 LGA E 19 E 19 2.515 0 0.313 0.936 2.520 36.818 38.990 2.053 LGA V 20 V 20 4.134 0 0.127 1.144 7.783 4.545 4.156 3.853 LGA R 21 R 21 4.964 0 0.095 1.001 6.301 3.182 1.818 5.904 LGA C 22 C 22 6.918 0 0.055 0.146 7.764 0.000 0.000 7.583 LGA D 23 D 23 7.798 0 0.076 0.898 9.041 0.000 0.000 7.239 LGA E 24 E 24 9.802 0 0.122 1.322 13.551 0.000 0.000 13.551 LGA S 25 S 25 3.865 0 0.632 0.823 6.056 13.636 10.000 5.740 LGA N 26 N 26 3.756 0 0.109 0.845 6.888 15.000 7.500 5.937 LGA H 27 H 27 2.099 0 0.384 1.083 4.562 35.455 30.545 3.620 LGA C 28 C 28 2.841 0 0.061 0.777 3.224 27.273 25.758 3.224 LGA V 29 V 29 2.963 0 0.142 1.160 5.267 32.727 25.195 5.267 LGA E 30 E 30 1.108 0 0.060 0.927 3.058 55.000 47.879 3.058 LGA V 31 V 31 1.369 0 0.023 1.140 2.878 61.818 48.571 2.878 LGA R 32 R 32 1.310 0 0.254 1.097 3.824 65.909 55.702 2.044 LGA C 33 C 33 1.313 0 0.428 0.751 3.766 52.273 41.212 3.766 LGA S 34 S 34 3.427 0 0.556 0.821 6.667 12.727 12.121 3.500 LGA D 35 D 35 3.217 0 0.401 0.829 5.021 14.091 30.682 2.018 LGA T 36 T 36 2.907 0 0.128 1.094 5.028 39.545 25.455 5.028 LGA K 37 K 37 2.527 0 0.080 0.796 4.127 21.818 20.606 4.127 LGA Y 38 Y 38 2.700 0 0.070 1.168 8.713 45.455 18.030 8.713 LGA T 39 T 39 0.893 0 0.156 1.094 4.237 66.364 48.571 4.237 LGA L 40 L 40 2.260 0 0.165 1.014 6.170 36.364 21.591 6.170 LGA C 41 C 41 1.851 0 0.397 0.616 4.398 31.364 29.351 3.430 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 4.438 4.384 5.389 27.894 21.408 8.426 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 32 2.61 64.634 59.259 1.180 LGA_LOCAL RMSD: 2.612 Number of atoms: 32 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.551 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 4.438 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.253996 * X + -0.567451 * Y + 0.783253 * Z + 27.255960 Y_new = -0.660162 * X + -0.490134 * Y + -0.569171 * Z + 64.476906 Z_new = 0.706875 * X + -0.661641 * Y + -0.250117 * Z + 78.959061 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.938086 -0.785071 -1.932217 [DEG: -111.0441 -44.9812 -110.7079 ] ZXZ: 0.942391 1.823598 2.323153 [DEG: 53.9950 104.4845 133.1069 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS337_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS337_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 32 2.61 59.259 4.44 REMARK ---------------------------------------------------------- MOLECULE T0955TS337_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 N SER 1 -3.622 -19.779 8.441 1.00 76.27 N ATOM 2 CA SER 1 -2.319 -19.679 7.744 1.00 76.27 C ATOM 3 CB SER 1 -2.493 -18.980 6.383 1.00 76.27 C ATOM 4 OG SER 1 -3.329 -19.757 5.538 1.00 76.27 O ATOM 5 C SER 1 -1.364 -18.887 8.569 1.00 76.27 C ATOM 6 O SER 1 -1.508 -18.796 9.787 1.00 76.27 O ATOM 7 N GLN 2 -0.341 -18.301 7.922 1.00269.64 N ATOM 8 CA GLN 2 0.600 -17.526 8.670 1.00269.64 C ATOM 9 CB GLN 2 2.033 -18.083 8.632 1.00269.64 C ATOM 10 CG GLN 2 2.663 -18.061 7.239 1.00269.64 C ATOM 11 CD GLN 2 4.067 -18.635 7.353 1.00269.64 C ATOM 12 OE1 GLN 2 4.761 -18.819 6.355 1.00269.64 O ATOM 13 NE2 GLN 2 4.503 -18.925 8.609 1.00269.64 N ATOM 14 C GLN 2 0.635 -16.158 8.073 1.00269.64 C ATOM 15 O GLN 2 0.385 -15.974 6.882 1.00269.64 O ATOM 16 N GLU 3 0.923 -15.151 8.916 1.00228.85 N ATOM 17 CA GLU 3 0.996 -13.801 8.445 1.00228.85 C ATOM 18 CB GLU 3 0.940 -12.756 9.568 1.00228.85 C ATOM 19 CG GLU 3 -0.398 -12.738 10.306 1.00228.85 C ATOM 20 CD GLU 3 -0.319 -11.684 11.399 1.00228.85 C ATOM 21 OE1 GLU 3 0.737 -11.002 11.487 1.00228.85 O ATOM 22 OE2 GLU 3 -1.316 -11.540 12.155 1.00228.85 O ATOM 23 C GLU 3 2.306 -13.657 7.750 1.00228.85 C ATOM 24 O GLU 3 3.254 -14.387 8.034 1.00228.85 O ATOM 25 N THR 4 2.382 -12.715 6.793 1.00216.25 N ATOM 26 CA THR 4 3.605 -12.539 6.072 1.00216.25 C ATOM 27 CB THR 4 3.466 -12.843 4.607 1.00216.25 C ATOM 28 OG1 THR 4 2.997 -14.172 4.433 1.00216.25 O ATOM 29 CG2 THR 4 4.833 -12.676 3.923 1.00216.25 C ATOM 30 C THR 4 3.993 -11.102 6.199 1.00216.25 C ATOM 31 O THR 4 3.163 -10.246 6.497 1.00216.25 O ATOM 32 N ARG 5 5.291 -10.807 5.994 1.00241.95 N ATOM 33 CA ARG 5 5.762 -9.457 6.074 1.00241.95 C ATOM 34 CB ARG 5 7.296 -9.352 6.098 1.00241.95 C ATOM 35 CG ARG 5 7.899 -9.951 7.369 1.00241.95 C ATOM 36 CD ARG 5 7.623 -11.449 7.514 1.00241.95 C ATOM 37 NE ARG 5 8.261 -11.904 8.780 1.00241.95 N ATOM 38 CZ ARG 5 9.540 -12.383 8.773 1.00241.95 C ATOM 39 NH1 ARG 5 10.242 -12.449 7.604 1.00241.95 N ATOM 40 NH2 ARG 5 10.117 -12.806 9.935 1.00241.95 N ATOM 41 C ARG 5 5.255 -8.756 4.861 1.00241.95 C ATOM 42 O ARG 5 5.047 -9.379 3.821 1.00241.95 O ATOM 43 N LYS 6 5.015 -7.436 4.965 1.00265.56 N ATOM 44 CA LYS 6 4.462 -6.765 3.830 1.00265.56 C ATOM 45 CB LYS 6 3.093 -6.141 4.133 1.00265.56 C ATOM 46 CG LYS 6 2.049 -7.185 4.527 1.00265.56 C ATOM 47 CD LYS 6 0.810 -6.601 5.207 1.00265.56 C ATOM 48 CE LYS 6 -0.409 -6.516 4.288 1.00265.56 C ATOM 49 NZ LYS 6 -1.035 -7.851 4.146 1.00265.56 N ATOM 50 C LYS 6 5.387 -5.673 3.399 1.00265.56 C ATOM 51 O LYS 6 5.977 -4.970 4.217 1.00265.56 O ATOM 52 N LYS 7 5.536 -5.533 2.068 1.00153.16 N ATOM 53 CA LYS 7 6.330 -4.504 1.467 1.00153.16 C ATOM 54 CB LYS 7 6.413 -4.619 -0.064 1.00153.16 C ATOM 55 CG LYS 7 7.358 -3.597 -0.698 1.00153.16 C ATOM 56 CD LYS 7 7.571 -3.796 -2.201 1.00153.16 C ATOM 57 CE LYS 7 8.056 -5.195 -2.585 1.00153.16 C ATOM 58 NZ LYS 7 6.915 -6.137 -2.570 1.00153.16 N ATOM 59 C LYS 7 5.640 -3.220 1.767 1.00153.16 C ATOM 60 O LYS 7 6.265 -2.169 1.892 1.00153.16 O ATOM 61 N CYS 8 4.304 -3.300 1.893 1.00 82.85 N ATOM 62 CA CYS 8 3.465 -2.160 2.091 1.00 82.85 C ATOM 63 CB CYS 8 1.979 -2.525 2.216 1.00 82.85 C ATOM 64 SG CYS 8 1.626 -3.473 3.726 1.00 82.85 S ATOM 65 C CYS 8 3.858 -1.479 3.358 1.00 82.85 C ATOM 66 O CYS 8 3.781 -0.256 3.448 1.00 82.85 O ATOM 67 N THR 9 4.300 -2.245 4.372 1.00 91.70 N ATOM 68 CA THR 9 4.635 -1.632 5.624 1.00 91.70 C ATOM 69 CB THR 9 5.128 -2.611 6.655 1.00 91.70 C ATOM 70 OG1 THR 9 5.239 -1.969 7.916 1.00 91.70 O ATOM 71 CG2 THR 9 6.492 -3.174 6.227 1.00 91.70 C ATOM 72 C THR 9 5.706 -0.616 5.372 1.00 91.70 C ATOM 73 O THR 9 5.675 0.480 5.932 1.00 91.70 O ATOM 74 N GLU 10 6.680 -0.945 4.506 1.00 35.18 N ATOM 75 CA GLU 10 7.737 -0.018 4.227 1.00 35.18 C ATOM 76 CB GLU 10 8.747 -0.553 3.199 1.00 35.18 C ATOM 77 CG GLU 10 9.779 0.490 2.757 1.00 35.18 C ATOM 78 CD GLU 10 10.539 -0.084 1.569 1.00 35.18 C ATOM 79 OE1 GLU 10 10.496 -1.331 1.386 1.00 35.18 O ATOM 80 OE2 GLU 10 11.172 0.716 0.829 1.00 35.18 O ATOM 81 C GLU 10 7.143 1.211 3.622 1.00 35.18 C ATOM 82 O GLU 10 7.498 2.328 3.995 1.00 35.18 O ATOM 83 N MET 11 6.204 1.032 2.677 1.00 70.26 N ATOM 84 CA MET 11 5.633 2.158 2.002 1.00 70.26 C ATOM 85 CB MET 11 4.586 1.767 0.943 1.00 70.26 C ATOM 86 CG MET 11 5.143 0.975 -0.240 1.00 70.26 C ATOM 87 SD MET 11 3.885 0.527 -1.473 1.00 70.26 S ATOM 88 CE MET 11 5.031 -0.368 -2.560 1.00 70.26 C ATOM 89 C MET 11 4.910 2.999 3.003 1.00 70.26 C ATOM 90 O MET 11 5.030 4.221 2.996 1.00 70.26 O ATOM 91 N LYS 12 4.168 2.351 3.920 1.00 89.62 N ATOM 92 CA LYS 12 3.329 3.045 4.852 1.00 89.62 C ATOM 93 CB LYS 12 2.557 2.082 5.770 1.00 89.62 C ATOM 94 CG LYS 12 1.586 1.177 5.011 1.00 89.62 C ATOM 95 CD LYS 12 0.536 1.957 4.218 1.00 89.62 C ATOM 96 CE LYS 12 -0.403 1.072 3.395 1.00 89.62 C ATOM 97 NZ LYS 12 -1.401 1.917 2.703 1.00 89.62 N ATOM 98 C LYS 12 4.151 3.943 5.715 1.00 89.62 C ATOM 99 O LYS 12 3.747 5.066 6.007 1.00 89.62 O ATOM 100 N LYS 13 5.337 3.488 6.146 0.50135.50 N ATOM 101 CA LYS 13 6.114 4.305 7.030 0.50135.50 C ATOM 102 CB LYS 13 7.442 3.638 7.433 0.50135.50 C ATOM 103 CG LYS 13 7.256 2.338 8.217 0.50135.50 C ATOM 104 CD LYS 13 6.472 2.510 9.519 0.50135.50 C ATOM 105 CE LYS 13 7.252 3.241 10.612 1.00135.50 C ATOM 106 NZ LYS 13 6.399 3.409 11.809 1.00135.50 N ATOM 107 C LYS 13 6.442 5.583 6.321 0.50135.50 C ATOM 108 O LYS 13 6.370 6.665 6.899 0.50135.50 O ATOM 109 N LYS 14 6.802 5.478 5.031 1.00104.53 N ATOM 110 CA LYS 14 7.223 6.603 4.246 1.00104.53 C ATOM 111 CB LYS 14 7.711 6.174 2.854 1.00104.53 C ATOM 112 CG LYS 14 8.287 7.310 2.008 1.00104.53 C ATOM 113 CD LYS 14 9.101 6.802 0.816 1.00104.53 C ATOM 114 CE LYS 14 9.597 7.912 -0.114 1.00104.53 C ATOM 115 NZ LYS 14 8.481 8.403 -0.949 1.00104.53 N ATOM 116 C LYS 14 6.103 7.583 4.055 1.00104.53 C ATOM 117 O LYS 14 6.315 8.791 4.138 1.00104.53 O ATOM 118 N PHE 15 4.873 7.088 3.817 1.00120.41 N ATOM 119 CA PHE 15 3.776 7.947 3.468 1.00120.41 C ATOM 120 CB PHE 15 2.585 7.218 2.820 1.00120.41 C ATOM 121 CG PHE 15 3.020 6.710 1.490 1.00120.41 C ATOM 122 CD1 PHE 15 3.213 7.577 0.439 1.00120.41 C ATOM 123 CD2 PHE 15 3.209 5.362 1.285 1.00120.41 C ATOM 124 CE1 PHE 15 3.613 7.106 -0.789 1.00120.41 C ATOM 125 CE2 PHE 15 3.610 4.887 0.058 1.00120.41 C ATOM 126 CZ PHE 15 3.810 5.760 -0.985 1.00120.41 C ATOM 127 C PHE 15 3.227 8.692 4.643 1.00120.41 C ATOM 128 O PHE 15 3.476 8.363 5.802 1.00120.41 O ATOM 129 N LYS 16 2.475 9.766 4.312 1.00145.25 N ATOM 130 CA LYS 16 1.758 10.614 5.218 1.00145.25 C ATOM 131 CB LYS 16 1.750 12.093 4.793 1.00145.25 C ATOM 132 CG LYS 16 3.125 12.763 4.840 1.00145.25 C ATOM 133 CD LYS 16 3.732 12.822 6.243 1.00145.25 C ATOM 134 CE LYS 16 4.343 11.498 6.702 1.00145.25 C ATOM 135 NZ LYS 16 4.936 11.650 8.050 1.00145.25 N ATOM 136 C LYS 16 0.347 10.130 5.127 1.00145.25 C ATOM 137 O LYS 16 0.114 8.928 5.010 1.00145.25 O ATOM 138 N ASN 17 -0.645 11.038 5.207 1.00 50.94 N ATOM 139 CA ASN 17 -1.994 10.562 5.079 1.00 50.94 C ATOM 140 CB ASN 17 -3.056 11.675 5.151 1.00 50.94 C ATOM 141 CG ASN 17 -3.096 12.222 6.571 1.00 50.94 C ATOM 142 OD1 ASN 17 -3.247 11.476 7.537 1.00 50.94 O ATOM 143 ND2 ASN 17 -2.955 13.568 6.704 1.00 50.94 N ATOM 144 C ASN 17 -2.088 9.945 3.723 1.00 50.94 C ATOM 145 O ASN 17 -1.737 10.567 2.722 1.00 50.94 O ATOM 146 N CYS 18 -2.554 8.684 3.650 1.00 78.97 N ATOM 147 CA CYS 18 -2.630 8.057 2.365 1.00 78.97 C ATOM 148 CB CYS 18 -1.417 7.162 2.051 1.00 78.97 C ATOM 149 SG CYS 18 -1.242 5.777 3.217 1.00 78.97 S ATOM 150 C CYS 18 -3.836 7.184 2.342 1.00 78.97 C ATOM 151 O CYS 18 -4.346 6.779 3.385 1.00 78.97 O ATOM 152 N GLU 19 -4.335 6.880 1.130 1.00 81.96 N ATOM 153 CA GLU 19 -5.470 6.016 1.042 1.00 81.96 C ATOM 154 CB GLU 19 -6.729 6.700 0.481 1.00 81.96 C ATOM 155 CG GLU 19 -6.551 7.286 -0.920 1.00 81.96 C ATOM 156 CD GLU 19 -7.867 7.943 -1.307 1.00 81.96 C ATOM 157 OE1 GLU 19 -8.888 7.686 -0.615 1.00 81.96 O ATOM 158 OE2 GLU 19 -7.868 8.709 -2.307 1.00 81.96 O ATOM 159 C GLU 19 -5.101 4.879 0.151 1.00 81.96 C ATOM 160 O GLU 19 -4.274 5.020 -0.751 1.00 81.96 O ATOM 161 N VAL 20 -5.691 3.700 0.415 1.00 87.14 N ATOM 162 CA VAL 20 -5.395 2.561 -0.395 1.00 87.14 C ATOM 163 CB VAL 20 -5.140 1.310 0.393 1.00 87.14 C ATOM 164 CG1 VAL 20 -3.899 1.540 1.268 1.00 87.14 C ATOM 165 CG2 VAL 20 -6.405 0.955 1.191 1.00 87.14 C ATOM 166 C VAL 20 -6.590 2.315 -1.248 1.00 87.14 C ATOM 167 O VAL 20 -7.727 2.375 -0.785 1.00 87.14 O ATOM 168 N ARG 21 -6.350 2.046 -2.542 1.00112.91 N ATOM 169 CA ARG 21 -7.432 1.790 -3.441 1.00112.91 C ATOM 170 CB ARG 21 -7.430 2.705 -4.679 1.00112.91 C ATOM 171 CG ARG 21 -8.563 2.400 -5.660 1.00112.91 C ATOM 172 CD ARG 21 -9.955 2.744 -5.129 1.00112.91 C ATOM 173 NE ARG 21 -10.209 4.180 -5.440 1.00112.91 N ATOM 174 CZ ARG 21 -11.480 4.674 -5.378 1.00112.91 C ATOM 175 NH1 ARG 21 -12.508 3.860 -5.002 1.00112.91 N ATOM 176 NH2 ARG 21 -11.723 5.977 -5.705 1.00112.91 N ATOM 177 C ARG 21 -7.267 0.393 -3.926 1.00112.91 C ATOM 178 O ARG 21 -6.150 -0.072 -4.148 1.00112.91 O ATOM 179 N CYS 22 -8.392 -0.328 -4.078 1.00 29.89 N ATOM 180 CA CYS 22 -8.307 -1.668 -4.563 1.00 29.89 C ATOM 181 CB CYS 22 -9.081 -2.691 -3.715 1.00 29.89 C ATOM 182 SG CYS 22 -8.402 -2.867 -2.039 1.00 29.89 S ATOM 183 C CYS 22 -8.921 -1.666 -5.918 1.00 29.89 C ATOM 184 O CYS 22 -9.923 -0.996 -6.163 1.00 29.89 O ATOM 185 N ASP 23 -8.304 -2.415 -6.845 1.00103.74 N ATOM 186 CA ASP 23 -8.811 -2.505 -8.177 1.00103.74 C ATOM 187 CB ASP 23 -7.753 -2.987 -9.186 1.00103.74 C ATOM 188 CG ASP 23 -8.265 -2.719 -10.592 1.00103.74 C ATOM 189 OD1 ASP 23 -9.313 -2.029 -10.723 1.00103.74 O ATOM 190 OD2 ASP 23 -7.610 -3.197 -11.555 1.00103.74 O ATOM 191 C ASP 23 -9.892 -3.525 -8.113 1.00103.74 C ATOM 192 O ASP 23 -10.231 -4.002 -7.030 1.00103.74 O ATOM 193 N GLU 24 -10.484 -3.871 -9.271 1.00117.15 N ATOM 194 CA GLU 24 -11.503 -4.876 -9.263 1.00117.15 C ATOM 195 CB GLU 24 -12.005 -5.232 -10.672 1.00117.15 C ATOM 196 CG GLU 24 -13.075 -6.327 -10.687 1.00117.15 C ATOM 197 CD GLU 24 -14.377 -5.746 -10.156 1.00117.15 C ATOM 198 OE1 GLU 24 -14.832 -4.709 -10.707 1.00117.15 O ATOM 199 OE2 GLU 24 -14.934 -6.337 -9.193 1.00117.15 O ATOM 200 C GLU 24 -10.847 -6.085 -8.705 1.00117.15 C ATOM 201 O GLU 24 -11.400 -6.772 -7.847 1.00117.15 O ATOM 202 N SER 25 -9.618 -6.365 -9.171 1.00124.44 N ATOM 203 CA SER 25 -8.925 -7.472 -8.597 1.00124.44 C ATOM 204 CB SER 25 -7.619 -7.830 -9.332 1.00124.44 C ATOM 205 OG SER 25 -6.984 -8.933 -8.701 1.00124.44 O ATOM 206 C SER 25 -8.563 -7.024 -7.218 1.00124.44 C ATOM 207 O SER 25 -8.088 -5.906 -7.015 1.00124.44 O ATOM 208 N ASN 26 -8.799 -7.894 -6.222 1.00131.78 N ATOM 209 CA ASN 26 -8.488 -7.551 -4.869 1.00131.78 C ATOM 210 CB ASN 26 -8.936 -8.616 -3.854 1.00131.78 C ATOM 211 CG ASN 26 -8.157 -9.898 -4.134 1.00131.78 C ATOM 212 OD1 ASN 26 -7.398 -10.379 -3.293 1.00131.78 O ATOM 213 ND2 ASN 26 -8.342 -10.467 -5.353 1.00131.78 N ATOM 214 C ASN 26 -7.009 -7.438 -4.779 1.00131.78 C ATOM 215 O ASN 26 -6.474 -6.613 -4.041 1.00131.78 O ATOM 216 N HIS 27 -6.318 -8.277 -5.563 1.00207.39 N ATOM 217 CA HIS 27 -4.893 -8.373 -5.522 1.00207.39 C ATOM 218 ND1 HIS 27 -1.854 -9.186 -6.739 1.00207.39 N ATOM 219 CG HIS 27 -2.964 -9.859 -6.283 1.00207.39 C ATOM 220 CB HIS 27 -4.376 -9.421 -6.523 1.00207.39 C ATOM 221 NE2 HIS 27 -1.108 -10.977 -5.650 1.00207.39 N ATOM 222 CD2 HIS 27 -2.492 -10.949 -5.619 1.00207.39 C ATOM 223 CE1 HIS 27 -0.771 -9.898 -6.333 1.00207.39 C ATOM 224 C HIS 27 -4.293 -7.046 -5.869 1.00207.39 C ATOM 225 O HIS 27 -3.377 -6.584 -5.191 1.00207.39 O ATOM 226 N CYS 28 -4.799 -6.382 -6.926 1.00100.09 N ATOM 227 CA CYS 28 -4.212 -5.130 -7.313 1.00100.09 C ATOM 228 CB CYS 28 -4.767 -4.565 -8.632 1.00100.09 C ATOM 229 SG CYS 28 -3.995 -2.983 -9.086 1.00100.09 S ATOM 230 C CYS 28 -4.478 -4.122 -6.250 1.00100.09 C ATOM 231 O CYS 28 -5.592 -4.024 -5.738 1.00100.09 O ATOM 232 N VAL 29 -3.444 -3.345 -5.876 1.00 94.05 N ATOM 233 CA VAL 29 -3.655 -2.348 -4.873 1.00 94.05 C ATOM 234 CB VAL 29 -3.183 -2.767 -3.513 1.00 94.05 C ATOM 235 CG1 VAL 29 -4.011 -3.985 -3.071 1.00 94.05 C ATOM 236 CG2 VAL 29 -1.670 -3.032 -3.577 1.00 94.05 C ATOM 237 C VAL 29 -2.876 -1.137 -5.259 1.00 94.05 C ATOM 238 O VAL 29 -1.778 -1.227 -5.808 1.00 94.05 O ATOM 239 N GLU 30 -3.446 0.049 -4.989 1.00104.93 N ATOM 240 CA GLU 30 -2.746 1.255 -5.300 1.00104.93 C ATOM 241 CB GLU 30 -3.433 2.089 -6.397 1.00104.93 C ATOM 242 CG GLU 30 -2.681 3.362 -6.808 1.00104.93 C ATOM 243 CD GLU 30 -3.249 4.568 -6.065 1.00104.93 C ATOM 244 OE1 GLU 30 -3.020 4.681 -4.832 1.00104.93 O ATOM 245 OE2 GLU 30 -3.919 5.405 -6.729 1.00104.93 O ATOM 246 C GLU 30 -2.730 2.066 -4.054 1.00104.93 C ATOM 247 O GLU 30 -3.764 2.263 -3.419 1.00104.93 O ATOM 248 N VAL 31 -1.539 2.551 -3.659 1.00 93.42 N ATOM 249 CA VAL 31 -1.455 3.375 -2.492 1.00 93.42 C ATOM 250 CB VAL 31 -0.450 2.888 -1.488 1.00 93.42 C ATOM 251 CG1 VAL 31 0.935 2.849 -2.157 1.00 93.42 C ATOM 252 CG2 VAL 31 -0.520 3.800 -0.248 1.00 93.42 C ATOM 253 C VAL 31 -1.027 4.729 -2.958 1.00 93.42 C ATOM 254 O VAL 31 -0.066 4.864 -3.714 1.00 93.42 O ATOM 255 N ARG 32 -1.764 5.778 -2.545 0.50 99.89 N ATOM 256 CA ARG 32 -1.407 7.091 -2.992 0.50 99.89 C ATOM 257 CB ARG 32 -2.352 7.664 -4.064 0.50 99.89 C ATOM 258 CG ARG 32 -3.813 7.752 -3.625 1.00 99.89 C ATOM 259 CD ARG 32 -4.750 8.178 -4.754 1.00 99.89 C ATOM 260 NE ARG 32 -6.147 8.042 -4.260 1.00 99.89 N ATOM 261 CZ ARG 32 -7.165 7.892 -5.158 1.00 99.89 C ATOM 262 NH1 ARG 32 -6.893 7.865 -6.495 1.00 99.89 N ATOM 263 NH2 ARG 32 -8.453 7.765 -4.725 1.00 99.89 N ATOM 264 C ARG 32 -1.412 8.022 -1.826 0.50 99.89 C ATOM 265 O ARG 32 -2.226 7.902 -0.911 0.50 99.89 O ATOM 266 N CYS 33 -0.465 8.978 -1.843 1.00 67.37 N ATOM 267 CA CYS 33 -0.327 9.960 -0.810 1.00 67.37 C ATOM 268 CB CYS 33 0.870 9.680 0.123 1.00 67.37 C ATOM 269 SG CYS 33 0.906 10.721 1.615 1.00 67.37 S ATOM 270 C CYS 33 -0.068 11.235 -1.544 1.00 67.37 C ATOM 271 O CYS 33 -0.409 11.341 -2.720 1.00 67.37 O ATOM 272 N SER 34 0.529 12.243 -0.876 1.00175.27 N ATOM 273 CA SER 34 0.817 13.480 -1.542 1.00175.27 C ATOM 274 CB SER 34 1.621 14.465 -0.681 1.00175.27 C ATOM 275 OG SER 34 1.864 15.656 -1.413 1.00175.27 O ATOM 276 C SER 34 1.651 13.135 -2.726 1.00175.27 C ATOM 277 O SER 34 2.659 12.444 -2.586 1.00175.27 O ATOM 278 N ASP 35 1.233 13.671 -3.896 1.00177.23 N ATOM 279 CA ASP 35 1.718 13.446 -5.234 1.00177.23 C ATOM 280 CB ASP 35 2.452 14.666 -5.820 1.00177.23 C ATOM 281 CG ASP 35 1.409 15.763 -5.996 1.00177.23 C ATOM 282 OD1 ASP 35 0.267 15.571 -5.502 1.00177.23 O ATOM 283 OD2 ASP 35 1.734 16.801 -6.630 1.00177.23 O ATOM 284 C ASP 35 2.621 12.260 -5.301 1.00177.23 C ATOM 285 O ASP 35 3.738 12.342 -5.807 1.00177.23 O ATOM 286 N THR 36 2.143 11.115 -4.780 1.00126.94 N ATOM 287 CA THR 36 2.909 9.907 -4.834 1.00126.94 C ATOM 288 CB THR 36 3.588 9.566 -3.542 1.00126.94 C ATOM 289 OG1 THR 36 4.430 8.436 -3.711 1.00126.94 O ATOM 290 CG2 THR 36 2.515 9.277 -2.479 1.00126.94 C ATOM 291 C THR 36 1.939 8.811 -5.111 1.00126.94 C ATOM 292 O THR 36 0.813 8.831 -4.616 1.00126.94 O ATOM 293 N LYS 37 2.342 7.828 -5.935 1.00 96.00 N ATOM 294 CA LYS 37 1.429 6.760 -6.195 1.00 96.00 C ATOM 295 CB LYS 37 0.652 6.928 -7.511 1.00 96.00 C ATOM 296 CG LYS 37 -0.334 5.792 -7.782 1.00 96.00 C ATOM 297 CD LYS 37 -1.299 6.082 -8.932 1.00 96.00 C ATOM 298 CE LYS 37 -0.735 5.701 -10.302 1.00 96.00 C ATOM 299 NZ LYS 37 0.447 6.537 -10.612 1.00 96.00 N ATOM 300 C LYS 37 2.236 5.518 -6.327 1.00 96.00 C ATOM 301 O LYS 37 3.260 5.501 -7.008 1.00 96.00 O ATOM 302 N TYR 38 1.806 4.432 -5.663 1.00 97.79 N ATOM 303 CA TYR 38 2.558 3.231 -5.837 1.00 97.79 C ATOM 304 CB TYR 38 3.327 2.794 -4.581 1.00 97.79 C ATOM 305 CG TYR 38 4.365 1.849 -5.068 1.00 97.79 C ATOM 306 CD1 TYR 38 4.086 0.519 -5.276 1.00 97.79 C ATOM 307 CD2 TYR 38 5.630 2.323 -5.330 1.00 97.79 C ATOM 308 CE1 TYR 38 5.067 -0.328 -5.735 1.00 97.79 C ATOM 309 CE2 TYR 38 6.614 1.481 -5.788 1.00 97.79 C ATOM 310 CZ TYR 38 6.330 0.152 -5.991 1.00 97.79 C ATOM 311 OH TYR 38 7.337 -0.717 -6.462 1.00 97.79 O ATOM 312 C TYR 38 1.559 2.171 -6.160 1.00 97.79 C ATOM 313 O TYR 38 0.478 2.129 -5.575 1.00 97.79 O ATOM 314 N THR 39 1.878 1.292 -7.129 1.00 98.03 N ATOM 315 CA THR 39 0.925 0.274 -7.448 1.00 98.03 C ATOM 316 CB THR 39 0.489 0.281 -8.883 1.00 98.03 C ATOM 317 OG1 THR 39 1.599 0.044 -9.736 1.00 98.03 O ATOM 318 CG2 THR 39 -0.147 1.643 -9.204 1.00 98.03 C ATOM 319 C THR 39 1.555 -1.049 -7.185 1.00 98.03 C ATOM 320 O THR 39 2.730 -1.266 -7.480 1.00 98.03 O ATOM 321 N LEU 40 0.777 -1.969 -6.592 1.00 33.72 N ATOM 322 CA LEU 40 1.278 -3.284 -6.347 1.00 33.72 C ATOM 323 CB LEU 40 0.959 -3.830 -4.946 1.00 33.72 C ATOM 324 CG LEU 40 1.652 -3.056 -3.809 1.00 33.72 C ATOM 325 CD1 LEU 40 1.306 -3.652 -2.435 1.00 33.72 C ATOM 326 CD2 LEU 40 3.168 -2.962 -4.047 1.00 33.72 C ATOM 327 C LEU 40 0.593 -4.171 -7.326 1.00 33.72 C ATOM 328 O LEU 40 -0.599 -4.021 -7.587 1.00 33.72 O ATOM 329 N CYS 41 1.352 -5.112 -7.914 1.00 21.19 N ATOM 330 CA CYS 41 0.772 -6.010 -8.861 1.00 21.19 C ATOM 331 CB CYS 41 1.810 -6.676 -9.781 1.00 21.19 C ATOM 332 SG CYS 41 2.636 -5.481 -10.874 1.00 21.19 S ATOM 333 C CYS 41 0.102 -7.116 -8.062 1.00 21.19 C ATOM 334 O CYS 41 -0.476 -8.033 -8.703 1.00 21.19 O ATOM 335 OXT CYS 41 0.160 -7.064 -6.804 1.00 21.19 O TER END