####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS324_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS324_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 1 - 39 4.43 6.07 LCS_AVERAGE: 93.46 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 33 4 - 36 1.76 6.59 LCS_AVERAGE: 67.64 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 6 - 32 0.99 6.56 LCS_AVERAGE: 48.07 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 5 39 0 3 4 5 6 7 8 9 13 13 15 17 18 25 31 32 37 37 37 38 LCS_GDT Q 2 Q 2 3 5 39 0 3 4 5 13 19 23 30 31 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT E 3 E 3 3 5 39 1 3 4 5 6 7 16 19 30 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT T 4 T 4 3 33 39 1 3 4 5 6 19 29 30 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT R 5 R 5 11 33 39 3 3 4 15 26 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT K 6 K 6 27 33 39 6 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT K 7 K 7 27 33 39 11 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT C 8 C 8 27 33 39 8 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT T 9 T 9 27 33 39 9 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT E 10 E 10 27 33 39 11 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT M 11 M 11 27 33 39 11 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT K 12 K 12 27 33 39 11 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT K 13 K 13 27 33 39 8 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT K 14 K 14 27 33 39 11 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT F 15 F 15 27 33 39 9 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT K 16 K 16 27 33 39 4 10 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT N 17 N 17 27 33 39 9 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT C 18 C 18 27 33 39 11 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT E 19 E 19 27 33 39 11 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT V 20 V 20 27 33 39 6 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT R 21 R 21 27 33 39 6 17 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT C 22 C 22 27 33 39 6 13 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT D 23 D 23 27 33 39 3 13 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT E 24 E 24 27 33 39 3 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT S 25 S 25 27 33 39 8 9 17 27 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT N 26 N 26 27 33 39 3 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT H 27 H 27 27 33 39 11 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT C 28 C 28 27 33 39 11 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT V 29 V 29 27 33 39 9 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT E 30 E 30 27 33 39 11 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT V 31 V 31 27 33 39 11 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT R 32 R 32 27 33 39 9 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT C 33 C 33 9 33 39 3 12 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT S 34 S 34 9 33 39 4 19 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT D 35 D 35 9 33 39 4 4 17 27 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT T 36 T 36 5 33 39 4 4 5 7 20 29 32 32 32 33 34 35 35 35 36 37 37 37 37 38 LCS_GDT K 37 K 37 5 7 39 4 4 5 5 6 7 8 11 11 13 18 26 34 35 36 37 37 37 37 38 LCS_GDT Y 38 Y 38 5 7 39 3 4 5 5 6 7 8 11 11 15 24 27 34 34 35 37 37 37 37 38 LCS_GDT T 39 T 39 5 7 39 3 4 5 5 6 7 8 11 11 12 13 16 17 19 20 20 21 32 36 37 LCS_GDT L 40 L 40 5 6 38 3 3 5 5 6 6 8 11 11 12 13 14 15 15 16 17 21 22 26 26 LCS_GDT C 41 C 41 4 6 12 3 3 4 5 6 6 6 11 11 12 13 14 15 19 20 20 21 24 26 26 LCS_AVERAGE LCS_A: 69.72 ( 48.07 67.64 93.46 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 20 28 28 29 30 32 32 32 33 34 35 35 35 36 37 37 37 37 38 GDT PERCENT_AT 26.83 48.78 68.29 68.29 70.73 73.17 78.05 78.05 78.05 80.49 82.93 85.37 85.37 85.37 87.80 90.24 90.24 90.24 90.24 92.68 GDT RMS_LOCAL 0.36 0.58 0.96 0.96 1.08 1.21 1.52 1.52 1.52 1.76 2.16 2.44 2.44 2.44 2.83 3.33 3.33 3.33 3.33 3.77 GDT RMS_ALL_AT 6.49 6.48 6.54 6.54 6.55 6.60 6.59 6.59 6.59 6.59 6.55 6.55 6.55 6.55 6.43 6.28 6.28 6.28 6.28 6.22 # Checking swapping # possible swapping detected: E 19 E 19 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 13.202 0 0.054 0.646 15.878 0.000 0.000 15.068 LGA Q 2 Q 2 8.133 0 0.264 1.191 10.363 0.000 0.000 7.040 LGA E 3 E 3 8.586 0 0.209 1.221 12.355 0.000 0.000 12.355 LGA T 4 T 4 5.469 0 0.141 1.335 6.631 0.455 1.299 5.006 LGA R 5 R 5 3.579 0 0.596 1.098 12.414 23.182 8.430 12.414 LGA K 6 K 6 0.958 0 0.256 1.159 3.816 74.091 51.919 3.816 LGA K 7 K 7 0.254 0 0.062 0.635 2.372 100.000 81.818 2.372 LGA C 8 C 8 0.885 0 0.035 0.040 1.367 81.818 76.364 1.367 LGA T 9 T 9 0.596 0 0.031 0.930 2.363 90.909 76.364 2.363 LGA E 10 E 10 0.409 0 0.025 0.702 3.522 100.000 66.263 3.522 LGA M 11 M 11 0.236 0 0.027 0.958 3.567 100.000 81.136 3.567 LGA K 12 K 12 0.438 0 0.023 0.553 1.351 90.909 80.606 1.351 LGA K 13 K 13 0.742 0 0.084 0.615 2.977 86.364 65.859 1.428 LGA K 14 K 14 0.244 0 0.022 0.632 2.005 100.000 91.111 2.005 LGA F 15 F 15 0.583 0 0.044 0.273 1.266 86.364 82.149 0.866 LGA K 16 K 16 1.364 0 0.077 1.109 4.271 73.636 52.121 3.586 LGA N 17 N 17 0.722 0 0.090 1.118 2.876 81.818 71.136 1.729 LGA C 18 C 18 0.799 0 0.062 0.089 1.093 77.727 79.091 0.864 LGA E 19 E 19 0.763 0 0.154 0.811 4.613 81.818 50.909 3.013 LGA V 20 V 20 1.240 0 0.037 0.319 1.778 61.818 61.299 1.221 LGA R 21 R 21 1.451 0 0.047 1.600 8.441 65.455 34.380 6.466 LGA C 22 C 22 1.534 0 0.111 0.347 3.053 58.182 52.727 3.053 LGA D 23 D 23 1.533 0 0.234 0.310 2.490 51.364 44.773 2.427 LGA E 24 E 24 1.233 0 0.155 0.722 4.025 55.000 44.040 4.025 LGA S 25 S 25 2.827 0 0.110 0.572 3.960 33.636 28.788 2.819 LGA N 26 N 26 1.763 0 0.417 1.223 6.785 48.182 27.500 6.785 LGA H 27 H 27 0.492 0 0.239 1.441 4.344 86.364 54.727 4.344 LGA C 28 C 28 0.595 0 0.109 0.881 3.702 90.909 76.061 3.702 LGA V 29 V 29 0.721 0 0.039 1.134 2.520 81.818 67.792 2.416 LGA E 30 E 30 0.628 0 0.155 0.721 3.133 74.091 55.556 3.133 LGA V 31 V 31 0.506 0 0.040 1.087 2.683 95.455 77.403 1.765 LGA R 32 R 32 0.566 0 0.065 0.748 1.660 78.636 74.711 1.409 LGA C 33 C 33 1.710 0 0.553 0.613 4.660 43.182 48.182 1.237 LGA S 34 S 34 1.576 0 0.549 0.912 4.740 36.364 46.061 1.416 LGA D 35 D 35 3.201 0 0.041 0.823 4.501 21.364 17.045 3.805 LGA T 36 T 36 3.929 0 0.181 0.873 6.028 12.273 8.831 4.014 LGA K 37 K 37 8.492 0 0.164 0.909 13.156 0.000 0.000 13.037 LGA Y 38 Y 38 11.301 0 0.095 1.328 16.310 0.000 0.000 16.310 LGA T 39 T 39 16.305 0 0.084 0.954 17.962 0.000 0.000 14.039 LGA L 40 L 40 20.419 0 0.140 1.121 24.232 0.000 0.000 22.953 LGA C 41 C 41 21.892 0 0.487 1.301 25.972 0.000 0.000 18.724 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 5.930 6.090 6.664 54.712 44.791 26.297 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 32 1.52 71.341 72.665 1.974 LGA_LOCAL RMSD: 1.521 Number of atoms: 32 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.589 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 5.930 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.139412 * X + -0.919946 * Y + 0.366420 * Z + -1.725458 Y_new = -0.920619 * X + -0.256703 * Y + -0.294219 * Z + 1.251730 Z_new = 0.364727 * X + -0.296316 * Y + -0.882707 * Z + -0.507231 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.420505 -0.373339 -2.817723 [DEG: -81.3889 -21.3908 -161.4436 ] ZXZ: 0.894257 2.652388 2.253072 [DEG: 51.2371 151.9706 129.0915 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS324_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS324_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 32 1.52 72.665 5.93 REMARK ---------------------------------------------------------- MOLECULE T0955TS324_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT 5kvnA ATOM 1 CB SER 1 -7.526 -5.383 3.007 1.00 24.27 C ATOM 2 OG SER 1 -6.689 -4.243 3.111 1.00 24.27 O ATOM 4 C SER 1 -6.918 -6.387 5.272 1.00 24.27 C ATOM 5 O SER 1 -5.964 -5.665 5.599 1.00 24.27 O ATOM 8 N SER 1 -8.678 -4.642 5.054 1.00 24.27 N ATOM 10 CA SER 1 -8.049 -5.816 4.383 1.00 24.27 C ATOM 11 N GLN 2 -7.056 -7.658 5.689 1.00 20.62 N ATOM 13 CA GLN 2 -6.080 -8.340 6.580 1.00 20.62 C ATOM 14 CB GLN 2 -6.783 -8.753 7.899 1.00 20.62 C ATOM 15 CG GLN 2 -8.070 -9.588 7.758 1.00 20.62 C ATOM 16 CD GLN 2 -8.685 -9.943 9.098 1.00 20.62 C ATOM 17 OE1 GLN 2 -8.369 -10.979 9.683 1.00 20.62 O ATOM 18 NE2 GLN 2 -9.568 -9.082 9.592 1.00 20.62 N ATOM 21 C GLN 2 -5.041 -9.453 6.195 1.00 20.62 C ATOM 22 O GLN 2 -3.896 -9.375 6.660 1.00 20.62 O ATOM 23 N GLU 3 -5.415 -10.440 5.359 1.00 13.65 N ATOM 25 CA GLU 3 -4.548 -11.623 5.045 1.00 13.65 C ATOM 26 CB GLU 3 -5.391 -12.897 5.254 1.00 13.65 C ATOM 27 CG GLU 3 -5.558 -13.310 6.713 1.00 13.65 C ATOM 28 CD GLU 3 -6.393 -14.566 6.875 1.00 13.65 C ATOM 29 OE1 GLU 3 -7.629 -14.448 7.009 1.00 13.65 O ATOM 30 OE2 GLU 3 -5.813 -15.673 6.871 1.00 13.65 O ATOM 31 C GLU 3 -3.511 -11.957 3.917 1.00 13.65 C ATOM 32 O GLU 3 -2.657 -12.817 4.181 1.00 13.65 O ATOM 33 N THR 4 -3.491 -11.316 2.733 1.00 11.13 N ATOM 35 CA THR 4 -2.542 -11.783 1.670 1.00 11.13 C ATOM 36 CB THR 4 -3.185 -11.666 0.250 1.00 11.13 C ATOM 37 OG1 THR 4 -4.098 -10.563 0.229 1.00 11.13 O ATOM 39 CG2 THR 4 -3.900 -12.959 -0.142 1.00 11.13 C ATOM 40 C THR 4 -1.041 -11.443 1.490 1.00 11.13 C ATOM 41 O THR 4 -0.268 -12.375 1.203 1.00 11.13 O ATOM 42 N ARG 5 -0.591 -10.195 1.707 1.00 11.17 N ATOM 44 CA ARG 5 0.846 -9.833 1.543 1.00 11.17 C ATOM 45 CB ARG 5 1.260 -9.667 0.063 1.00 11.17 C ATOM 46 CG ARG 5 1.722 -10.933 -0.654 1.00 11.17 C ATOM 47 CD ARG 5 2.101 -10.642 -2.098 1.00 11.17 C ATOM 48 NE ARG 5 2.546 -11.846 -2.804 1.00 11.17 N ATOM 50 CZ ARG 5 2.938 -11.889 -4.078 1.00 11.17 C ATOM 51 NH1 ARG 5 3.321 -13.043 -4.605 1.00 11.17 N ATOM 54 NH2 ARG 5 2.952 -10.793 -4.831 1.00 11.17 N ATOM 57 C ARG 5 1.394 -8.663 2.366 1.00 11.17 C ATOM 58 O ARG 5 0.849 -7.555 2.332 1.00 11.17 O ATOM 59 N LYS 6 2.596 -8.873 2.914 1.00 9.18 N ATOM 61 CA LYS 6 3.316 -7.916 3.776 1.00 9.18 C ATOM 62 CB LYS 6 4.565 -8.600 4.385 1.00 9.18 C ATOM 63 CG LYS 6 5.490 -9.342 3.406 1.00 9.18 C ATOM 64 CD LYS 6 6.677 -9.968 4.131 1.00 9.18 C ATOM 65 CE LYS 6 7.609 -10.711 3.177 1.00 9.18 C ATOM 66 NZ LYS 6 7.007 -11.948 2.595 1.00 9.18 N ATOM 70 C LYS 6 3.664 -6.512 3.206 1.00 9.18 C ATOM 71 O LYS 6 4.250 -5.682 3.920 1.00 9.18 O ATOM 72 N LYS 7 3.259 -6.243 1.956 1.00 8.19 N ATOM 74 CA LYS 7 3.503 -4.950 1.285 1.00 8.19 C ATOM 75 CB LYS 7 3.396 -5.080 -0.236 1.00 8.19 C ATOM 76 CG LYS 7 4.670 -5.562 -0.899 1.00 8.19 C ATOM 77 CD LYS 7 4.502 -5.671 -2.412 1.00 8.19 C ATOM 78 CE LYS 7 5.776 -6.156 -3.100 1.00 8.19 C ATOM 79 NZ LYS 7 6.115 -7.579 -2.796 1.00 8.19 N ATOM 83 C LYS 7 2.626 -3.786 1.782 1.00 8.19 C ATOM 84 O LYS 7 3.034 -2.624 1.671 1.00 8.19 O ATOM 85 N CYS 8 1.455 -4.104 2.358 1.00 7.65 N ATOM 87 CA CYS 8 0.513 -3.096 2.896 1.00 7.65 C ATOM 88 CB CYS 8 -0.826 -3.732 3.275 1.00 7.65 C ATOM 89 SG CYS 8 -2.108 -2.543 3.766 1.00 7.65 S ATOM 90 C CYS 8 1.091 -2.385 4.130 1.00 7.65 C ATOM 91 O CYS 8 0.994 -1.156 4.237 1.00 7.65 O ATOM 92 N THR 9 1.698 -3.169 5.035 1.00 7.21 N ATOM 94 CA THR 9 2.309 -2.656 6.275 1.00 7.21 C ATOM 95 CB THR 9 2.572 -3.787 7.309 1.00 7.21 C ATOM 96 OG1 THR 9 3.249 -4.879 6.671 1.00 7.21 O ATOM 98 CG2 THR 9 1.264 -4.275 7.911 1.00 7.21 C ATOM 99 C THR 9 3.601 -1.853 6.019 1.00 7.21 C ATOM 100 O THR 9 3.821 -0.816 6.661 1.00 7.21 O ATOM 101 N GLU 10 4.428 -2.330 5.074 1.00 7.01 N ATOM 103 CA GLU 10 5.692 -1.673 4.678 1.00 7.01 C ATOM 104 CB GLU 10 6.586 -2.624 3.880 1.00 7.01 C ATOM 105 CG GLU 10 7.390 -3.576 4.748 1.00 7.01 C ATOM 106 CD GLU 10 8.270 -4.509 3.937 1.00 7.01 C ATOM 107 OE1 GLU 10 7.799 -5.608 3.575 1.00 7.01 O ATOM 108 OE2 GLU 10 9.433 -4.146 3.664 1.00 7.01 O ATOM 109 C GLU 10 5.497 -0.357 3.911 1.00 7.01 C ATOM 110 O GLU 10 6.199 0.627 4.181 1.00 7.01 O ATOM 111 N MET 11 4.543 -0.353 2.964 1.00 5.75 N ATOM 113 CA MET 11 4.203 0.828 2.144 1.00 5.75 C ATOM 114 CG MET 11 4.112 0.291 -0.325 1.00 5.75 C ATOM 115 SD MET 11 3.208 -0.393 -1.712 1.00 5.75 S ATOM 116 CE MET 11 4.158 -1.887 -2.011 1.00 5.75 C ATOM 117 C MET 11 3.537 1.938 2.967 1.00 5.75 C ATOM 118 O MET 11 3.723 3.128 2.675 1.00 5.75 O ATOM 119 CB MET 11 3.322 0.438 0.956 1.00 5.75 C ATOM 120 N LYS 12 2.779 1.530 3.996 1.00 4.80 N ATOM 122 CA LYS 12 2.076 2.442 4.920 1.00 4.80 C ATOM 123 CB LYS 12 1.069 1.661 5.775 1.00 4.80 C ATOM 124 CG LYS 12 -0.208 2.423 6.128 1.00 4.80 C ATOM 125 CD LYS 12 -1.143 1.573 6.973 1.00 4.80 C ATOM 126 CE LYS 12 -2.412 2.331 7.325 1.00 4.80 C ATOM 127 NZ LYS 12 -3.339 1.510 8.152 1.00 4.80 N ATOM 131 C LYS 12 3.079 3.198 5.823 1.00 4.80 C ATOM 132 O LYS 12 2.870 4.380 6.129 1.00 4.80 O ATOM 133 N LYS 13 4.153 2.498 6.223 1.00 4.57 N ATOM 135 CA LYS 13 5.224 3.041 7.080 1.00 4.57 C ATOM 136 CB LYS 13 6.035 1.908 7.712 1.00 4.57 C ATOM 137 CG LYS 13 5.392 1.308 8.951 1.00 4.57 C ATOM 138 CD LYS 13 6.244 0.190 9.532 1.00 4.57 C ATOM 139 CE LYS 13 5.599 -0.408 10.771 1.00 4.57 C ATOM 140 NZ LYS 13 6.423 -1.505 11.351 1.00 4.57 N ATOM 144 C LYS 13 6.171 4.027 6.370 1.00 4.57 C ATOM 145 O LYS 13 6.675 4.968 6.999 1.00 4.57 O ATOM 146 N LYS 14 6.383 3.805 5.065 1.00 4.72 N ATOM 148 CA LYS 14 7.255 4.631 4.201 1.00 4.72 C ATOM 149 CB LYS 14 7.660 3.852 2.944 1.00 4.72 C ATOM 150 CG LYS 14 8.575 2.670 3.198 1.00 4.72 C ATOM 151 CD LYS 14 8.928 1.955 1.902 1.00 4.72 C ATOM 152 CE LYS 14 9.846 0.770 2.157 1.00 4.72 C ATOM 153 NZ LYS 14 10.200 0.061 0.897 1.00 4.72 N ATOM 157 C LYS 14 6.627 5.970 3.778 1.00 4.72 C ATOM 158 O LYS 14 7.324 6.989 3.706 1.00 4.72 O ATOM 159 N PHE 15 5.315 5.938 3.511 1.00 1.76 N ATOM 161 CA PHE 15 4.526 7.099 3.065 1.00 1.76 C ATOM 162 CB PHE 15 3.888 6.786 1.677 1.00 1.76 C ATOM 163 CG PHE 15 4.863 6.252 0.624 1.00 1.76 C ATOM 164 CD1 PHE 15 5.074 4.860 0.469 1.00 1.76 C ATOM 165 CD2 PHE 15 5.546 7.136 -0.245 1.00 1.76 C ATOM 166 CE1 PHE 15 5.949 4.355 -0.533 1.00 1.76 C ATOM 167 CE2 PHE 15 6.425 6.647 -1.251 1.00 1.76 C ATOM 168 CZ PHE 15 6.626 5.253 -1.395 1.00 1.76 C ATOM 169 C PHE 15 3.447 7.479 4.115 1.00 1.76 C ATOM 170 O PHE 15 2.238 7.426 3.838 1.00 1.76 O ATOM 171 N LYS 16 3.912 8.003 5.260 1.00 1.22 N ATOM 173 CA LYS 16 3.075 8.386 6.429 1.00 1.22 C ATOM 174 CB LYS 16 3.971 8.898 7.561 1.00 1.22 C ATOM 175 CG LYS 16 4.861 7.855 8.191 1.00 1.22 C ATOM 176 CD LYS 16 5.715 8.453 9.304 1.00 1.22 C ATOM 177 CE LYS 16 6.624 7.413 9.956 1.00 1.22 C ATOM 178 NZ LYS 16 5.885 6.386 10.750 1.00 1.22 N ATOM 182 C LYS 16 1.925 9.397 6.249 1.00 1.22 C ATOM 183 O LYS 16 0.910 9.312 6.956 1.00 1.22 O ATOM 184 N ASN 17 2.087 10.333 5.310 1.00 0.92 N ATOM 186 CA ASN 17 1.095 11.387 5.023 1.00 0.92 C ATOM 187 CB ASN 17 1.821 12.655 4.538 1.00 0.92 C ATOM 188 CG ASN 17 2.900 13.126 5.509 1.00 0.92 C ATOM 189 OD1 ASN 17 4.063 12.731 5.402 1.00 0.92 O ATOM 190 ND2 ASN 17 2.519 13.989 6.447 1.00 0.92 N ATOM 193 C ASN 17 0.065 10.938 3.971 1.00 0.92 C ATOM 194 O ASN 17 -0.951 11.610 3.745 1.00 0.92 O ATOM 195 N CYS 18 0.333 9.765 3.390 1.00 0.90 N ATOM 197 CA CYS 18 -0.471 9.132 2.336 1.00 0.90 C ATOM 198 CB CYS 18 0.470 8.472 1.339 1.00 0.90 C ATOM 199 SG CYS 18 1.722 9.598 0.765 1.00 0.90 S ATOM 200 C CYS 18 -1.554 8.135 2.765 1.00 0.90 C ATOM 201 O CYS 18 -1.586 7.689 3.919 1.00 0.90 O ATOM 202 N GLU 19 -2.482 7.865 1.839 1.00 1.45 N ATOM 204 CA GLU 19 -3.589 6.920 2.033 1.00 1.45 C ATOM 205 CB GLU 19 -4.923 7.582 1.686 1.00 1.45 C ATOM 206 CG GLU 19 -5.297 8.682 2.643 1.00 1.45 C ATOM 207 CD GLU 19 -6.622 9.338 2.299 1.00 1.45 C ATOM 208 OE1 GLU 19 -6.616 10.327 1.534 1.00 1.45 O ATOM 209 OE2 GLU 19 -7.668 8.870 2.794 1.00 1.45 O ATOM 210 C GLU 19 -3.363 5.658 1.188 1.00 1.45 C ATOM 211 O GLU 19 -3.320 5.728 -0.050 1.00 1.45 O ATOM 212 N VAL 20 -3.197 4.518 1.873 1.00 1.59 N ATOM 214 CA VAL 20 -2.939 3.214 1.237 1.00 1.59 C ATOM 215 CB VAL 20 -1.715 2.466 1.892 1.00 1.59 C ATOM 216 CG1 VAL 20 -0.928 1.711 0.830 1.00 1.59 C ATOM 217 CG2 VAL 20 -0.790 3.446 2.612 1.00 1.59 C ATOM 218 C VAL 20 -4.182 2.298 1.207 1.00 1.59 C ATOM 219 O VAL 20 -4.730 1.922 2.256 1.00 1.59 O ATOM 220 N ARG 21 -4.645 2.027 -0.019 1.00 1.76 N ATOM 222 CA ARG 21 -5.793 1.164 -0.319 1.00 1.76 C ATOM 223 CB ARG 21 -6.644 1.786 -1.443 1.00 1.76 C ATOM 224 CG ARG 21 -7.733 2.770 -0.998 1.00 1.76 C ATOM 225 CD ARG 21 -7.267 4.223 -0.682 1.00 1.76 C ATOM 226 NE ARG 21 -6.493 4.324 0.563 1.00 1.76 N ATOM 228 CZ ARG 21 -6.991 4.628 1.767 1.00 1.76 C ATOM 229 NH1 ARG 21 -6.180 4.687 2.814 1.00 1.76 N ATOM 232 NH2 ARG 21 -8.288 4.871 1.933 1.00 1.76 N ATOM 235 C ARG 21 -5.342 -0.246 -0.713 1.00 1.76 C ATOM 236 O ARG 21 -4.623 -0.419 -1.709 1.00 1.76 O ATOM 237 N CYS 22 -5.718 -1.234 0.107 1.00 1.85 N ATOM 239 CA CYS 22 -5.372 -2.638 -0.133 1.00 1.85 C ATOM 240 CB CYS 22 -4.533 -3.213 1.011 1.00 1.85 C ATOM 241 SG CYS 22 -2.792 -2.831 0.829 1.00 1.85 S ATOM 242 C CYS 22 -6.548 -3.562 -0.442 1.00 1.85 C ATOM 243 O CYS 22 -7.551 -3.590 0.285 1.00 1.85 O ATOM 244 N ASP 23 -6.408 -4.274 -1.566 1.00 2.15 N ATOM 246 CA ASP 23 -7.369 -5.263 -2.077 1.00 2.15 C ATOM 247 CB ASP 23 -7.768 -4.949 -3.526 1.00 2.15 C ATOM 248 CG ASP 23 -8.711 -3.769 -3.633 1.00 2.15 C ATOM 249 OD1 ASP 23 -8.227 -2.624 -3.775 1.00 2.15 O ATOM 250 OD2 ASP 23 -9.944 -3.980 -3.598 1.00 2.15 O ATOM 251 C ASP 23 -6.667 -6.627 -1.988 1.00 2.15 C ATOM 252 O ASP 23 -5.626 -6.846 -2.624 1.00 2.15 O ATOM 253 N GLU 24 -7.229 -7.509 -1.158 1.00 2.67 N ATOM 255 CA GLU 24 -6.696 -8.854 -0.876 1.00 2.67 C ATOM 256 CB GLU 24 -7.492 -9.504 0.257 1.00 2.67 C ATOM 257 CG GLU 24 -7.229 -8.902 1.629 1.00 2.67 C ATOM 258 CD GLU 24 -8.036 -9.570 2.728 1.00 2.67 C ATOM 259 OE1 GLU 24 -9.165 -9.112 3.001 1.00 2.67 O ATOM 260 OE2 GLU 24 -7.539 -10.552 3.320 1.00 2.67 O ATOM 261 C GLU 24 -6.395 -9.913 -1.955 1.00 2.67 C ATOM 262 O GLU 24 -5.251 -10.375 -2.021 1.00 2.67 O ATOM 263 N SER 25 -7.357 -10.250 -2.830 1.00 2.44 N ATOM 265 CA SER 25 -7.127 -11.303 -3.844 1.00 2.44 C ATOM 266 CB SER 25 -8.467 -11.919 -4.256 1.00 2.44 C ATOM 267 OG SER 25 -9.385 -10.917 -4.663 1.00 2.44 O ATOM 269 C SER 25 -6.332 -10.855 -5.086 1.00 2.44 C ATOM 270 O SER 25 -5.199 -11.316 -5.269 1.00 2.44 O ATOM 271 N ASN 26 -6.917 -9.995 -5.936 1.00 4.05 N ATOM 273 CA ASN 26 -6.238 -9.392 -7.107 1.00 4.05 C ATOM 274 CB ASN 26 -7.259 -8.726 -8.050 1.00 4.05 C ATOM 275 CG ASN 26 -8.279 -9.711 -8.608 1.00 4.05 C ATOM 276 OD1 ASN 26 -8.072 -10.302 -9.670 1.00 4.05 O ATOM 277 ND2 ASN 26 -9.393 -9.877 -7.902 1.00 4.05 N ATOM 280 C ASN 26 -5.252 -8.378 -6.472 1.00 4.05 C ATOM 281 O ASN 26 -5.349 -7.167 -6.719 1.00 4.05 O ATOM 282 N HIS 27 -4.219 -8.904 -5.803 1.00 2.72 N ATOM 284 CA HIS 27 -3.275 -8.108 -4.998 1.00 2.72 C ATOM 285 CG HIS 27 -1.666 -10.090 -4.760 1.00 2.72 C ATOM 286 CD2 HIS 27 -0.325 -10.266 -4.851 1.00 2.72 C ATOM 287 ND1 HIS 27 -2.233 -11.134 -5.461 1.00 2.72 N ATOM 289 CE1 HIS 27 -1.280 -11.905 -5.953 1.00 2.72 C ATOM 290 NE2 HIS 27 -0.112 -11.400 -5.597 1.00 2.72 N ATOM 292 C HIS 27 -2.369 -7.007 -5.583 1.00 2.72 C ATOM 293 O HIS 27 -1.194 -7.221 -5.911 1.00 2.72 O ATOM 294 CB HIS 27 -2.482 -9.041 -4.059 1.00 2.72 C ATOM 295 N CYS 28 -2.968 -5.812 -5.657 1.00 1.85 N ATOM 297 CA CYS 28 -2.343 -4.570 -6.119 1.00 1.85 C ATOM 298 CB CYS 28 -3.013 -4.060 -7.397 1.00 1.85 C ATOM 299 SG CYS 28 -4.724 -3.529 -7.147 1.00 1.85 S ATOM 300 C CYS 28 -2.613 -3.580 -4.982 1.00 1.85 C ATOM 301 O CYS 28 -3.700 -3.609 -4.388 1.00 1.85 O ATOM 302 N VAL 29 -1.635 -2.728 -4.670 1.00 2.49 N ATOM 304 CA VAL 29 -1.769 -1.723 -3.607 1.00 2.49 C ATOM 305 CB VAL 29 -0.795 -2.039 -2.384 1.00 2.49 C ATOM 306 CG1 VAL 29 0.640 -2.200 -2.839 1.00 2.49 C ATOM 307 CG2 VAL 29 -0.919 -1.013 -1.275 1.00 2.49 C ATOM 308 C VAL 29 -1.627 -0.305 -4.206 1.00 2.49 C ATOM 309 O VAL 29 -0.613 0.009 -4.842 1.00 2.49 O ATOM 310 N GLU 30 -2.689 0.495 -4.048 1.00 1.86 N ATOM 312 CA GLU 30 -2.754 1.876 -4.537 1.00 1.86 C ATOM 313 CB GLU 30 -4.035 2.110 -5.341 1.00 1.86 C ATOM 314 CG GLU 30 -3.857 1.859 -6.816 1.00 1.86 C ATOM 315 CD GLU 30 -5.130 2.092 -7.611 1.00 1.86 C ATOM 316 OE1 GLU 30 -5.346 3.233 -8.070 1.00 1.86 O ATOM 317 OE2 GLU 30 -5.912 1.132 -7.780 1.00 1.86 O ATOM 318 C GLU 30 -2.640 2.892 -3.401 1.00 1.86 C ATOM 319 O GLU 30 -3.545 3.011 -2.563 1.00 1.86 O ATOM 320 N VAL 31 -1.502 3.594 -3.375 1.00 1.51 N ATOM 322 CA VAL 31 -1.187 4.621 -2.373 1.00 1.51 C ATOM 323 CB VAL 31 0.240 4.352 -1.711 1.00 1.51 C ATOM 324 CG1 VAL 31 1.378 4.450 -2.732 1.00 1.51 C ATOM 325 CG2 VAL 31 0.479 5.248 -0.488 1.00 1.51 C ATOM 326 C VAL 31 -1.321 6.021 -3.023 1.00 1.51 C ATOM 327 O VAL 31 -0.955 6.200 -4.193 1.00 1.51 O ATOM 328 N ARG 32 -1.877 6.973 -2.263 1.00 1.16 N ATOM 330 CA ARG 32 -2.083 8.359 -2.709 1.00 1.16 C ATOM 331 CB ARG 32 -3.517 8.820 -2.402 1.00 1.16 C ATOM 332 CG ARG 32 -4.565 8.238 -3.327 1.00 1.16 C ATOM 333 CD ARG 32 -5.975 8.598 -2.883 1.00 1.16 C ATOM 334 NE ARG 32 -6.990 8.019 -3.769 1.00 1.16 N ATOM 336 CZ ARG 32 -8.122 7.439 -3.368 1.00 1.16 C ATOM 337 NH1 ARG 32 -8.425 7.338 -2.078 1.00 1.16 N ATOM 340 NH2 ARG 32 -8.962 6.952 -4.272 1.00 1.16 N ATOM 343 C ARG 32 -1.049 9.316 -2.089 1.00 1.16 C ATOM 344 O ARG 32 -1.130 9.657 -0.905 1.00 1.16 O ATOM 345 N CYS 33 -0.114 9.765 -2.936 1.00 1.33 N ATOM 347 CA CYS 33 0.987 10.690 -2.605 1.00 1.33 C ATOM 348 CB CYS 33 2.340 10.125 -3.065 1.00 1.33 C ATOM 349 SG CYS 33 3.325 9.363 -1.769 1.00 1.33 S ATOM 350 C CYS 33 0.635 12.005 -3.326 1.00 1.33 C ATOM 351 O CYS 33 0.841 12.141 -4.540 1.00 1.33 O ATOM 352 N SER 34 0.022 12.920 -2.562 1.00 2.43 N ATOM 354 CA SER 34 -0.508 14.223 -3.021 1.00 2.43 C ATOM 355 CB SER 34 -1.213 14.920 -1.841 1.00 2.43 C ATOM 356 OG SER 34 -0.291 15.281 -0.829 1.00 2.43 O ATOM 358 C SER 34 0.340 15.254 -3.817 1.00 2.43 C ATOM 359 O SER 34 0.331 16.449 -3.497 1.00 2.43 O ATOM 360 N ASP 35 1.106 14.773 -4.809 1.00 3.98 N ATOM 362 CA ASP 35 1.906 15.623 -5.710 1.00 3.98 C ATOM 363 CB ASP 35 3.363 15.155 -5.799 1.00 3.98 C ATOM 364 CG ASP 35 4.269 15.873 -4.814 1.00 3.98 C ATOM 365 OD1 ASP 35 4.839 16.925 -5.180 1.00 3.98 O ATOM 366 OD2 ASP 35 4.433 15.379 -3.676 1.00 3.98 O ATOM 367 C ASP 35 1.293 15.682 -7.118 1.00 3.98 C ATOM 368 O ASP 35 1.309 16.740 -7.754 1.00 3.98 O ATOM 369 N THR 36 0.748 14.545 -7.580 1.00 7.20 N ATOM 371 CA THR 36 0.117 14.398 -8.912 1.00 7.20 C ATOM 372 CB THR 36 0.334 12.969 -9.487 1.00 7.20 C ATOM 373 OG1 THR 36 0.022 11.992 -8.486 1.00 7.20 O ATOM 375 CG2 THR 36 1.767 12.789 -9.956 1.00 7.20 C ATOM 376 C THR 36 -1.385 14.767 -8.916 1.00 7.20 C ATOM 377 O THR 36 -1.979 14.918 -7.845 1.00 7.20 O ATOM 378 N LYS 37 -1.974 14.931 -10.112 1.00 10.98 N ATOM 380 CA LYS 37 -3.388 15.324 -10.266 1.00 10.98 C ATOM 381 CB LYS 37 -3.496 16.682 -11.005 1.00 10.98 C ATOM 382 CG LYS 37 -2.664 16.824 -12.289 1.00 10.98 C ATOM 383 CD LYS 37 -2.852 18.198 -12.921 1.00 10.98 C ATOM 384 CE LYS 37 -2.034 18.361 -14.200 1.00 10.98 C ATOM 385 NZ LYS 37 -2.515 17.512 -15.330 1.00 10.98 N ATOM 389 C LYS 37 -4.430 14.310 -10.814 1.00 10.98 C ATOM 390 O LYS 37 -4.482 14.040 -12.022 1.00 10.98 O ATOM 391 N TYR 38 -5.181 13.706 -9.883 1.00 14.71 N ATOM 393 CA TYR 38 -6.288 12.754 -10.134 1.00 14.71 C ATOM 394 CB TYR 38 -5.977 11.344 -9.549 1.00 14.71 C ATOM 395 CG TYR 38 -6.864 10.174 -10.011 1.00 14.71 C ATOM 396 CD1 TYR 38 -8.039 9.820 -9.301 1.00 14.71 C ATOM 397 CE1 TYR 38 -8.843 8.720 -9.705 1.00 14.71 C ATOM 398 CD2 TYR 38 -6.515 9.393 -11.141 1.00 14.71 C ATOM 399 CE2 TYR 38 -7.314 8.290 -11.552 1.00 14.71 C ATOM 400 CZ TYR 38 -8.472 7.963 -10.829 1.00 14.71 C ATOM 401 OH TYR 38 -9.247 6.896 -11.225 1.00 14.71 O ATOM 403 C TYR 38 -7.517 13.393 -9.435 1.00 14.71 C ATOM 404 O TYR 38 -7.346 14.348 -8.668 1.00 14.71 O ATOM 405 N THR 39 -8.735 12.901 -9.708 1.00 18.79 N ATOM 407 CA THR 39 -9.971 13.440 -9.090 1.00 18.79 C ATOM 408 CB THR 39 -11.215 13.224 -9.997 1.00 18.79 C ATOM 409 OG1 THR 39 -11.270 11.858 -10.429 1.00 18.79 O ATOM 411 CG2 THR 39 -11.157 14.142 -11.206 1.00 18.79 C ATOM 412 C THR 39 -10.208 12.846 -7.673 1.00 18.79 C ATOM 413 O THR 39 -10.170 11.618 -7.493 1.00 18.79 O ATOM 414 N LEU 40 -10.525 13.730 -6.713 1.00 21.08 N ATOM 416 CA LEU 40 -10.706 13.411 -5.272 1.00 21.08 C ATOM 417 CB LEU 40 -10.580 14.702 -4.413 1.00 21.08 C ATOM 418 CG LEU 40 -11.179 16.092 -4.731 1.00 21.08 C ATOM 419 CD1 LEU 40 -12.618 16.241 -4.209 1.00 21.08 C ATOM 420 CD2 LEU 40 -10.299 17.154 -4.091 1.00 21.08 C ATOM 421 C LEU 40 -11.867 12.543 -4.744 1.00 21.08 C ATOM 422 O LEU 40 -12.996 12.601 -5.249 1.00 21.08 O ATOM 423 N CYS 41 -11.539 11.765 -3.699 1.00 22.94 N ATOM 425 CA CYS 41 -12.435 10.836 -2.986 1.00 22.94 C ATOM 426 CB CYS 41 -11.672 9.545 -2.659 1.00 22.94 C ATOM 427 SG CYS 41 -10.029 9.819 -1.936 1.00 22.94 S ATOM 428 C CYS 41 -12.976 11.462 -1.699 1.00 22.94 C ATOM 429 O CYS 41 -12.252 12.287 -1.098 1.00 22.94 O ATOM 430 OXT CYS 41 -14.118 11.131 -1.315 1.00 22.94 O TER END