####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS288_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS288_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 1 - 20 4.23 12.28 LCS_AVERAGE: 43.66 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 1 - 16 1.79 14.00 LONGEST_CONTINUOUS_SEGMENT: 16 2 - 17 1.85 13.44 LCS_AVERAGE: 22.43 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.83 13.88 LCS_AVERAGE: 18.92 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 16 20 0 3 3 3 6 8 9 11 17 18 22 27 27 27 28 29 30 30 30 31 LCS_GDT Q 2 Q 2 15 16 20 8 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT E 3 E 3 15 16 20 10 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT T 4 T 4 15 16 20 10 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT R 5 R 5 15 16 20 10 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT K 6 K 6 15 16 20 10 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT K 7 K 7 15 16 20 10 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT C 8 C 8 15 16 20 10 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT T 9 T 9 15 16 20 10 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT E 10 E 10 15 16 20 10 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT M 11 M 11 15 16 20 10 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT K 12 K 12 15 16 20 10 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT K 13 K 13 15 16 20 10 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT K 14 K 14 15 16 20 10 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT F 15 F 15 15 16 20 7 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT K 16 K 16 15 16 20 4 5 14 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT N 17 N 17 5 16 20 4 5 5 6 8 11 17 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT C 18 C 18 5 7 20 4 5 5 6 8 11 15 19 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT E 19 E 19 5 7 20 3 3 5 6 8 9 11 13 16 22 23 27 27 27 28 29 30 30 30 31 LCS_GDT V 20 V 20 3 4 20 3 3 4 5 5 6 8 10 10 12 14 17 20 23 23 25 26 29 30 31 LCS_GDT R 21 R 21 3 4 19 3 3 4 5 5 6 8 10 10 12 14 17 20 23 23 25 26 27 28 29 LCS_GDT C 22 C 22 3 4 19 1 3 4 5 5 6 8 10 10 13 14 17 20 23 23 25 26 27 28 29 LCS_GDT D 23 D 23 4 4 19 3 4 4 4 4 6 8 10 10 13 14 17 20 23 23 25 26 27 28 29 LCS_GDT E 24 E 24 4 4 19 3 4 4 4 4 6 8 10 10 13 14 17 20 23 23 25 26 27 28 29 LCS_GDT S 25 S 25 4 4 19 3 4 4 4 4 6 8 10 10 13 14 17 20 23 23 25 26 27 28 29 LCS_GDT N 26 N 26 4 4 19 3 4 4 4 4 5 8 10 10 13 14 17 20 23 23 25 26 27 28 29 LCS_GDT H 27 H 27 3 4 19 3 3 3 5 5 6 8 10 10 12 14 16 20 23 23 25 26 27 28 28 LCS_GDT C 28 C 28 3 4 19 3 3 4 5 5 6 8 10 10 12 14 16 20 23 23 25 26 27 28 29 LCS_GDT V 29 V 29 3 4 19 3 3 4 4 4 6 8 10 10 13 14 17 20 23 23 25 26 27 28 29 LCS_GDT E 30 E 30 3 3 18 3 5 5 6 6 7 9 10 10 13 14 17 20 23 23 25 26 29 30 31 LCS_GDT V 31 V 31 3 3 18 3 4 4 4 4 6 7 8 10 11 14 17 23 24 27 28 30 30 30 31 LCS_GDT R 32 R 32 3 4 18 3 4 4 4 4 6 8 14 15 18 23 27 27 27 28 29 30 30 30 31 LCS_GDT C 33 C 33 4 5 15 3 4 4 6 11 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT S 34 S 34 4 5 14 3 4 4 6 6 7 7 14 21 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT D 35 D 35 4 5 14 3 4 4 6 6 7 7 9 15 16 19 22 25 26 28 29 30 30 30 31 LCS_GDT T 36 T 36 4 5 11 3 4 4 6 6 7 7 9 13 16 19 22 25 26 28 29 30 30 30 31 LCS_GDT K 37 K 37 4 5 11 0 3 4 5 5 7 11 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT Y 38 Y 38 3 4 11 0 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT T 39 T 39 3 4 11 3 12 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT L 40 L 40 3 4 11 3 3 4 4 16 16 18 20 22 24 24 27 27 27 28 29 30 30 30 31 LCS_GDT C 41 C 41 3 4 11 3 3 4 4 5 9 18 21 22 24 24 27 27 27 28 29 30 30 30 31 LCS_AVERAGE LCS_A: 28.34 ( 18.92 22.43 43.66 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 15 15 17 17 17 18 21 22 24 24 27 27 27 28 29 30 30 30 31 GDT PERCENT_AT 24.39 36.59 36.59 41.46 41.46 41.46 43.90 51.22 53.66 58.54 58.54 65.85 65.85 65.85 68.29 70.73 73.17 73.17 73.17 75.61 GDT RMS_LOCAL 0.32 0.59 0.59 0.94 0.94 0.94 1.38 2.48 2.56 3.04 3.04 3.79 3.79 3.79 3.96 4.17 4.47 4.47 4.47 4.94 GDT RMS_ALL_AT 14.10 14.18 14.18 13.91 13.91 13.91 13.97 13.46 13.47 13.25 13.25 12.86 12.86 12.86 13.26 13.05 12.89 12.89 12.89 12.67 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: F 15 F 15 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 6.931 0 0.485 0.626 8.777 4.091 2.727 7.928 LGA Q 2 Q 2 1.907 0 0.624 1.311 6.489 46.364 26.869 6.489 LGA E 3 E 3 1.257 0 0.060 1.017 6.813 70.000 40.404 5.740 LGA T 4 T 4 1.038 0 0.013 1.169 3.884 65.455 53.766 3.884 LGA R 5 R 5 0.994 0 0.065 1.014 2.710 73.636 68.099 2.710 LGA K 6 K 6 1.139 0 0.022 0.701 2.432 65.455 57.778 2.008 LGA K 7 K 7 1.119 0 0.124 0.659 1.602 69.545 62.424 1.508 LGA C 8 C 8 1.410 0 0.037 0.550 3.671 65.455 53.939 3.671 LGA T 9 T 9 1.489 0 0.021 0.167 1.652 61.818 57.143 1.575 LGA E 10 E 10 1.273 0 0.021 0.669 3.051 61.818 55.354 3.051 LGA M 11 M 11 1.269 0 0.071 0.959 3.655 61.818 54.091 3.655 LGA K 12 K 12 2.169 0 0.090 0.626 3.062 38.636 37.778 3.062 LGA K 13 K 13 2.571 0 0.020 0.951 4.241 32.727 27.273 2.756 LGA K 14 K 14 1.823 0 0.069 0.919 5.413 50.909 33.535 5.413 LGA F 15 F 15 1.727 0 0.486 1.277 9.975 45.000 18.843 9.975 LGA K 16 K 16 1.358 0 0.150 1.200 7.095 46.818 27.071 7.095 LGA N 17 N 17 5.121 0 0.115 0.671 7.577 6.818 3.409 7.379 LGA C 18 C 18 6.628 0 0.550 1.073 9.008 0.000 1.818 3.582 LGA E 19 E 19 9.210 0 0.567 0.986 13.118 0.000 0.000 8.848 LGA V 20 V 20 13.955 0 0.605 0.625 17.274 0.000 0.000 16.014 LGA R 21 R 21 19.624 0 0.646 1.528 25.728 0.000 0.000 25.728 LGA C 22 C 22 22.584 0 0.574 0.606 24.308 0.000 0.000 21.230 LGA D 23 D 23 27.084 0 0.626 1.250 29.788 0.000 0.000 26.954 LGA E 24 E 24 33.906 0 0.190 0.594 40.281 0.000 0.000 40.281 LGA S 25 S 25 33.664 0 0.549 0.856 33.870 0.000 0.000 33.870 LGA N 26 N 26 29.318 0 0.026 1.194 30.869 0.000 0.000 27.340 LGA H 27 H 27 27.652 0 0.406 1.225 31.848 0.000 0.000 31.848 LGA C 28 C 28 21.873 0 0.639 1.046 24.248 0.000 0.000 23.321 LGA V 29 V 29 17.243 0 0.590 0.589 19.801 0.000 0.000 16.097 LGA E 30 E 30 14.003 0 0.680 1.154 16.734 0.000 0.000 15.750 LGA V 31 V 31 10.739 0 0.111 0.171 13.415 0.000 0.000 11.026 LGA R 32 R 32 9.493 0 0.547 1.121 21.774 0.000 0.000 21.774 LGA C 33 C 33 4.492 0 0.135 0.393 6.360 1.364 11.818 2.977 LGA S 34 S 34 6.431 0 0.199 0.221 8.160 0.000 0.000 6.434 LGA D 35 D 35 9.353 0 0.065 1.102 10.638 0.000 0.000 7.580 LGA T 36 T 36 8.089 0 0.617 0.851 8.604 0.000 0.000 8.604 LGA K 37 K 37 4.072 0 0.638 1.255 8.198 6.364 6.263 8.198 LGA Y 38 Y 38 1.559 0 0.625 1.339 13.399 50.000 18.939 13.399 LGA T 39 T 39 1.673 0 0.614 0.557 6.137 59.091 34.026 6.137 LGA L 40 L 40 4.229 0 0.053 0.845 9.812 15.000 7.500 7.988 LGA C 41 C 41 4.878 1 0.565 0.590 8.334 1.364 0.779 8.334 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 10.682 10.584 11.517 24.379 18.577 7.361 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 21 2.48 50.000 42.802 0.815 LGA_LOCAL RMSD: 2.476 Number of atoms: 21 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.458 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 10.682 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.826221 * X + -0.420271 * Y + 0.375142 * Z + 5.410151 Y_new = 0.315180 * X + 0.207089 * Y + 0.926162 * Z + 8.432134 Z_new = -0.466927 * X + 0.883451 * Y + -0.038640 * Z + 7.432581 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.777160 0.485812 1.614506 [DEG: 159.1195 27.8350 92.5044 ] ZXZ: 2.756740 1.609446 -0.486207 [DEG: 157.9496 92.2144 -27.8576 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS288_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS288_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 21 2.48 42.802 10.68 REMARK ---------------------------------------------------------- MOLECULE T0955TS288_1 PFRMAT TS TARGET T0955 MODEL 1 REFINED PARENT N/A ATOM 1 N SER 1 1.149 -11.607 6.564 1.00 8.40 ATOM 2 CA SER 1 1.217 -12.890 5.818 1.00 8.40 ATOM 3 C SER 1 1.701 -12.696 4.371 1.00 8.40 ATOM 4 O SER 1 2.894 -12.849 4.105 1.00 8.40 ATOM 5 CB SER 1 -0.114 -13.656 5.893 1.00 8.80 ATOM 6 OG SER 1 -1.193 -12.848 5.435 1.00 8.80 ATOM 7 N GLN 2 0.806 -12.374 3.425 1.00 7.00 ATOM 8 CA GLN 2 1.086 -12.324 1.979 1.00 7.00 ATOM 9 C GLN 2 2.001 -11.157 1.578 1.00 7.00 ATOM 10 O GLN 2 1.936 -10.079 2.169 1.00 7.00 ATOM 11 CB GLN 2 -0.232 -12.222 1.182 1.00 8.10 ATOM 12 CG GLN 2 -1.295 -13.299 1.481 1.00 8.10 ATOM 13 CD GLN 2 -0.890 -14.732 1.127 1.00 8.10 ATOM 14 OE1 GLN 2 0.145 -15.015 0.534 1.00 8.10 ATOM 15 NE2 GLN 2 -1.708 -15.707 1.470 1.00 8.10 ATOM 16 N GLU 3 2.779 -11.321 0.503 1.00 5.80 ATOM 17 CA GLU 3 3.602 -10.248 -0.084 1.00 5.80 ATOM 18 C GLU 3 2.745 -9.058 -0.555 1.00 5.80 ATOM 19 O GLU 3 3.111 -7.908 -0.329 1.00 5.80 ATOM 20 CB GLU 3 4.445 -10.832 -1.233 1.00 6.60 ATOM 21 CG GLU 3 5.361 -9.796 -1.906 1.00 6.60 ATOM 22 CD GLU 3 6.143 -10.382 -3.097 1.00 6.60 ATOM 23 OE1 GLU 3 6.708 -11.499 -2.990 1.00 6.60 ATOM 24 OE2 GLU 3 6.214 -9.705 -4.154 1.00 6.60 ATOM 25 N THR 4 1.568 -9.322 -1.132 1.00 5.40 ATOM 26 CA THR 4 0.606 -8.293 -1.579 1.00 5.40 ATOM 27 C THR 4 0.161 -7.400 -0.413 1.00 5.40 ATOM 28 O THR 4 0.150 -6.171 -0.524 1.00 5.40 ATOM 29 CB THR 4 -0.627 -8.961 -2.222 1.00 6.10 ATOM 30 OG1 THR 4 -0.220 -9.935 -3.166 1.00 6.10 ATOM 31 CG2 THR 4 -1.538 -7.970 -2.946 1.00 6.10 ATOM 32 N ARG 5 -0.138 -8.017 0.741 1.00 4.70 ATOM 33 CA ARG 5 -0.507 -7.319 1.987 1.00 4.70 ATOM 34 C ARG 5 0.690 -6.592 2.600 1.00 4.70 ATOM 35 O ARG 5 0.563 -5.423 2.948 1.00 4.70 ATOM 36 CB ARG 5 -1.146 -8.301 2.986 1.00 6.60 ATOM 37 CG ARG 5 -2.500 -8.818 2.474 1.00 6.60 ATOM 38 CD ARG 5 -3.153 -9.784 3.469 1.00 6.60 ATOM 39 NE ARG 5 -4.432 -10.295 2.938 1.00 6.60 ATOM 40 CZ ARG 5 -5.242 -11.168 3.514 1.00 6.60 ATOM 41 NH1 ARG 5 -6.341 -11.533 2.918 1.00 6.60 ATOM 42 NH2 ARG 5 -4.984 -11.691 4.680 1.00 6.60 ATOM 43 N LYS 6 1.867 -7.231 2.649 1.00 3.70 ATOM 44 CA LYS 6 3.128 -6.627 3.127 1.00 3.70 ATOM 45 C LYS 6 3.472 -5.352 2.349 1.00 3.70 ATOM 46 O LYS 6 3.762 -4.329 2.966 1.00 3.70 ATOM 47 CB LYS 6 4.259 -7.671 3.045 1.00 4.80 ATOM 48 CG LYS 6 5.565 -7.174 3.687 1.00 4.80 ATOM 49 CD LYS 6 6.677 -8.226 3.565 1.00 4.80 ATOM 50 CE LYS 6 7.961 -7.717 4.237 1.00 4.80 ATOM 51 NZ LYS 6 9.074 -8.699 4.116 1.00 4.80 ATOM 52 N LYS 7 3.357 -5.386 1.016 1.00 3.70 ATOM 53 CA LYS 7 3.553 -4.226 0.128 1.00 3.70 ATOM 54 C LYS 7 2.562 -3.103 0.435 1.00 3.70 ATOM 55 O LYS 7 3.004 -1.997 0.727 1.00 3.70 ATOM 56 CB LYS 7 3.509 -4.674 -1.346 1.00 5.00 ATOM 57 CG LYS 7 4.848 -5.321 -1.738 1.00 5.00 ATOM 58 CD LYS 7 4.843 -5.883 -3.168 1.00 5.00 ATOM 59 CE LYS 7 6.279 -6.275 -3.551 1.00 5.00 ATOM 60 NZ LYS 7 6.343 -7.000 -4.848 1.00 5.00 ATOM 61 N CYS 8 1.255 -3.373 0.480 1.00 3.80 ATOM 62 CA CYS 8 0.255 -2.364 0.867 1.00 3.80 ATOM 63 C CYS 8 0.506 -1.776 2.274 1.00 3.80 ATOM 64 O CYS 8 0.454 -0.558 2.442 1.00 3.80 ATOM 65 CB CYS 8 -1.156 -2.963 0.775 1.00 4.40 ATOM 66 SG CYS 8 -2.090 -2.513 -0.716 1.00 4.40 ATOM 67 N THR 9 0.821 -2.601 3.278 1.00 3.30 ATOM 68 CA THR 9 1.100 -2.157 4.659 1.00 3.30 ATOM 69 C THR 9 2.364 -1.296 4.750 1.00 3.30 ATOM 70 O THR 9 2.341 -0.234 5.372 1.00 3.30 ATOM 71 CB THR 9 1.178 -3.375 5.600 1.00 3.80 ATOM 72 OG1 THR 9 -0.111 -3.951 5.701 1.00 3.80 ATOM 73 CG2 THR 9 1.623 -3.043 7.027 1.00 3.80 ATOM 74 N GLU 10 3.454 -1.689 4.081 1.00 3.10 ATOM 75 CA GLU 10 4.680 -0.884 3.994 1.00 3.10 ATOM 76 C GLU 10 4.431 0.440 3.256 1.00 3.10 ATOM 77 O GLU 10 4.844 1.494 3.733 1.00 3.10 ATOM 78 CB GLU 10 5.799 -1.707 3.330 1.00 4.10 ATOM 79 CG GLU 10 7.110 -0.914 3.205 1.00 4.10 ATOM 80 CD GLU 10 8.336 -1.797 2.885 1.00 4.10 ATOM 81 OE1 GLU 10 8.196 -2.874 2.254 1.00 4.10 ATOM 82 OE2 GLU 10 9.469 -1.403 3.255 1.00 4.10 ATOM 83 N MET 11 3.693 0.413 2.141 1.00 3.30 ATOM 84 CA MET 11 3.308 1.609 1.382 1.00 3.30 ATOM 85 C MET 11 2.427 2.564 2.201 1.00 3.30 ATOM 86 O MET 11 2.639 3.771 2.140 1.00 3.30 ATOM 87 CB MET 11 2.610 1.193 0.076 1.00 4.20 ATOM 88 CG MET 11 3.614 0.589 -0.916 1.00 4.20 ATOM 89 SD MET 11 2.862 -0.241 -2.342 1.00 4.20 ATOM 90 CE MET 11 4.325 -1.128 -2.941 1.00 4.20 ATOM 91 N LYS 12 1.501 2.052 3.024 1.00 3.30 ATOM 92 CA LYS 12 0.662 2.846 3.943 1.00 3.30 ATOM 93 C LYS 12 1.491 3.524 5.042 1.00 3.30 ATOM 94 O LYS 12 1.360 4.729 5.262 1.00 3.30 ATOM 95 CB LYS 12 -0.436 1.926 4.510 1.00 4.50 ATOM 96 CG LYS 12 -1.492 2.671 5.339 1.00 4.50 ATOM 97 CD LYS 12 -2.625 1.714 5.741 1.00 4.50 ATOM 98 CE LYS 12 -3.728 2.466 6.496 1.00 4.50 ATOM 99 NZ LYS 12 -4.884 1.577 6.805 1.00 4.50 ATOM 100 N LYS 13 2.406 2.779 5.675 1.00 3.20 ATOM 101 CA LYS 13 3.355 3.294 6.685 1.00 3.20 ATOM 102 C LYS 13 4.295 4.353 6.091 1.00 3.20 ATOM 103 O LYS 13 4.457 5.435 6.661 1.00 3.20 ATOM 104 CB LYS 13 4.108 2.092 7.286 1.00 4.30 ATOM 105 CG LYS 13 4.991 2.466 8.486 1.00 4.30 ATOM 106 CD LYS 13 5.584 1.201 9.127 1.00 4.30 ATOM 107 CE LYS 13 6.443 1.561 10.346 1.00 4.30 ATOM 108 NZ LYS 13 6.981 0.344 11.015 1.00 4.30 ATOM 109 N LYS 14 4.839 4.083 4.898 1.00 3.20 ATOM 110 CA LYS 14 5.673 5.011 4.114 1.00 3.20 ATOM 111 C LYS 14 4.908 6.272 3.712 1.00 3.20 ATOM 112 O LYS 14 5.440 7.362 3.882 1.00 3.20 ATOM 113 CB LYS 14 6.256 4.252 2.906 1.00 4.10 ATOM 114 CG LYS 14 7.272 5.079 2.102 1.00 4.10 ATOM 115 CD LYS 14 8.059 4.179 1.137 1.00 4.10 ATOM 116 CE LYS 14 9.083 4.999 0.340 1.00 4.10 ATOM 117 NZ LYS 14 9.980 4.122 -0.466 1.00 4.10 ATOM 118 N PHE 15 3.655 6.155 3.268 1.00 3.30 ATOM 119 CA PHE 15 2.797 7.289 2.899 1.00 3.30 ATOM 120 C PHE 15 2.536 8.238 4.080 1.00 3.30 ATOM 121 O PHE 15 2.700 9.448 3.927 1.00 3.30 ATOM 122 CB PHE 15 1.483 6.767 2.295 1.00 4.30 ATOM 123 CG PHE 15 0.537 7.856 1.823 1.00 4.30 ATOM 124 CD1 PHE 15 0.624 8.337 0.503 1.00 4.30 ATOM 125 CD2 PHE 15 -0.429 8.392 2.698 1.00 4.30 ATOM 126 CE1 PHE 15 -0.243 9.352 0.060 1.00 4.30 ATOM 127 CE2 PHE 15 -1.292 9.412 2.257 1.00 4.30 ATOM 128 CZ PHE 15 -1.199 9.892 0.939 1.00 4.30 ATOM 129 N LYS 16 2.207 7.718 5.275 1.00 3.20 ATOM 130 CA LYS 16 2.020 8.556 6.478 1.00 3.20 ATOM 131 C LYS 16 3.304 9.273 6.908 1.00 3.20 ATOM 132 O LYS 16 3.267 10.479 7.156 1.00 3.20 ATOM 133 CB LYS 16 1.435 7.741 7.644 1.00 4.50 ATOM 134 CG LYS 16 -0.069 7.480 7.463 1.00 4.50 ATOM 135 CD LYS 16 -0.699 7.015 8.784 1.00 4.50 ATOM 136 CE LYS 16 -2.217 6.845 8.633 1.00 4.50 ATOM 137 NZ LYS 16 -2.868 6.560 9.942 1.00 4.50 ATOM 138 N ASN 17 4.444 8.573 6.938 1.00 3.20 ATOM 139 CA ASN 17 5.743 9.196 7.230 1.00 3.20 ATOM 140 C ASN 17 6.095 10.269 6.182 1.00 3.20 ATOM 141 O ASN 17 6.452 11.387 6.544 1.00 3.20 ATOM 142 CB ASN 17 6.839 8.113 7.325 1.00 3.90 ATOM 143 CG ASN 17 6.804 7.286 8.606 1.00 3.90 ATOM 144 OD1 ASN 17 5.922 7.389 9.447 1.00 3.90 ATOM 145 ND2 ASN 17 7.802 6.454 8.813 1.00 3.90 ATOM 146 N CYS 18 5.923 9.953 4.896 1.00 3.40 ATOM 147 CA CYS 18 6.121 10.859 3.764 1.00 3.40 ATOM 148 C CYS 18 5.274 12.140 3.892 1.00 3.40 ATOM 149 O CYS 18 5.830 13.237 3.870 1.00 3.40 ATOM 150 CB CYS 18 5.832 10.068 2.474 1.00 3.90 ATOM 151 SG CYS 18 5.570 11.033 0.966 1.00 3.90 ATOM 152 N GLU 19 3.956 12.037 4.096 1.00 3.50 ATOM 153 CA GLU 19 3.066 13.206 4.161 1.00 3.50 ATOM 154 C GLU 19 3.402 14.158 5.327 1.00 3.50 ATOM 155 O GLU 19 3.377 15.379 5.152 1.00 3.50 ATOM 156 CB GLU 19 1.602 12.735 4.222 1.00 4.80 ATOM 157 CG GLU 19 0.615 13.912 4.151 1.00 4.80 ATOM 158 CD GLU 19 -0.848 13.445 4.013 1.00 4.80 ATOM 159 OE1 GLU 19 -1.322 12.636 4.848 1.00 4.80 ATOM 160 OE2 GLU 19 -1.552 13.918 3.086 1.00 4.80 ATOM 161 N VAL 20 3.755 13.621 6.504 1.00 3.10 ATOM 162 CA VAL 20 4.135 14.428 7.681 1.00 3.10 ATOM 163 C VAL 20 5.525 15.061 7.521 1.00 3.10 ATOM 164 O VAL 20 5.691 16.256 7.779 1.00 3.10 ATOM 165 CB VAL 20 4.041 13.595 8.978 1.00 3.80 ATOM 166 CG1 VAL 20 4.518 14.369 10.215 1.00 3.80 ATOM 167 CG2 VAL 20 2.590 13.168 9.246 1.00 3.80 ATOM 168 N ARG 21 6.532 14.291 7.076 1.00 3.10 ATOM 169 CA ARG 21 7.927 14.762 6.937 1.00 3.10 ATOM 170 C ARG 21 8.122 15.736 5.767 1.00 3.10 ATOM 171 O ARG 21 8.971 16.625 5.850 1.00 3.10 ATOM 172 CB ARG 21 8.876 13.554 6.814 1.00 4.90 ATOM 173 CG ARG 21 8.943 12.755 8.128 1.00 4.90 ATOM 174 CD ARG 21 9.789 11.488 7.972 1.00 4.90 ATOM 175 NE ARG 21 9.825 10.719 9.234 1.00 4.90 ATOM 176 CZ ARG 21 10.595 9.682 9.514 1.00 4.90 ATOM 177 NH1 ARG 21 10.536 9.114 10.684 1.00 4.90 ATOM 178 NH2 ARG 21 11.435 9.186 8.647 1.00 4.90 ATOM 179 N CYS 22 7.319 15.602 4.710 1.00 3.30 ATOM 180 CA CYS 22 7.325 16.459 3.520 1.00 3.30 ATOM 181 C CYS 22 6.176 17.491 3.485 1.00 3.30 ATOM 182 O CYS 22 5.749 17.911 2.410 1.00 3.30 ATOM 183 CB CYS 22 7.378 15.582 2.264 1.00 3.90 ATOM 184 SG CYS 22 8.926 14.656 2.055 1.00 3.90 ATOM 185 N ASP 23 5.683 17.952 4.642 1.00 3.40 ATOM 186 CA ASP 23 4.632 18.984 4.714 1.00 3.40 ATOM 187 C ASP 23 5.051 20.322 4.052 1.00 3.40 ATOM 188 O ASP 23 4.218 21.048 3.508 1.00 3.40 ATOM 189 CB ASP 23 4.262 19.202 6.189 1.00 4.60 ATOM 190 CG ASP 23 3.014 20.084 6.385 1.00 4.60 ATOM 191 OD1 ASP 23 2.016 19.930 5.638 1.00 4.60 ATOM 192 OD2 ASP 23 3.007 20.911 7.328 1.00 4.60 ATOM 193 N GLU 24 6.356 20.627 4.049 1.00 3.70 ATOM 194 CA GLU 24 6.967 21.780 3.359 1.00 3.70 ATOM 195 C GLU 24 7.467 21.463 1.927 1.00 3.70 ATOM 196 O GLU 24 8.121 22.303 1.301 1.00 3.70 ATOM 197 CB GLU 24 8.103 22.357 4.227 1.00 4.80 ATOM 198 CG GLU 24 7.612 22.886 5.585 1.00 4.80 ATOM 199 CD GLU 24 8.704 23.651 6.364 1.00 4.80 ATOM 200 OE1 GLU 24 9.917 23.352 6.218 1.00 4.80 ATOM 201 OE2 GLU 24 8.355 24.561 7.156 1.00 4.80 ATOM 202 N SER 25 7.190 20.264 1.391 1.00 3.80 ATOM 203 CA SER 25 7.720 19.772 0.107 1.00 3.80 ATOM 204 C SER 25 6.669 18.984 -0.688 1.00 3.80 ATOM 205 O SER 25 6.599 17.754 -0.646 1.00 3.80 ATOM 206 CB SER 25 8.997 18.954 0.349 1.00 4.10 ATOM 207 OG SER 25 9.568 18.543 -0.889 1.00 4.10 ATOM 208 N ASN 26 5.839 19.702 -1.452 1.00 4.00 ATOM 209 CA ASN 26 4.772 19.096 -2.260 1.00 4.00 ATOM 210 C ASN 26 5.295 18.225 -3.421 1.00 4.00 ATOM 211 O ASN 26 4.576 17.336 -3.875 1.00 4.00 ATOM 212 CB ASN 26 3.799 20.190 -2.736 1.00 4.90 ATOM 213 CG ASN 26 3.078 20.873 -1.582 1.00 4.90 ATOM 214 OD1 ASN 26 2.561 20.240 -0.670 1.00 4.90 ATOM 215 ND2 ASN 26 3.018 22.187 -1.572 1.00 4.90 ATOM 216 N HIS 27 6.556 18.381 -3.849 1.00 4.10 ATOM 217 CA HIS 27 7.203 17.446 -4.788 1.00 4.10 ATOM 218 C HIS 27 7.279 16.030 -4.198 1.00 4.10 ATOM 219 O HIS 27 6.866 15.067 -4.837 1.00 4.10 ATOM 220 CB HIS 27 8.603 17.958 -5.158 1.00 5.60 ATOM 221 CG HIS 27 9.395 16.969 -5.983 1.00 5.60 ATOM 222 ND1 HIS 27 9.137 16.625 -7.315 1.00 5.60 ATOM 223 CD2 HIS 27 10.445 16.221 -5.531 1.00 5.60 ATOM 224 CE1 HIS 27 10.038 15.680 -7.633 1.00 5.60 ATOM 225 NE2 HIS 27 10.836 15.419 -6.582 1.00 5.60 ATOM 226 N CYS 28 7.715 15.910 -2.940 1.00 4.10 ATOM 227 CA CYS 28 7.725 14.656 -2.179 1.00 4.10 ATOM 228 C CYS 28 6.303 14.120 -1.857 1.00 4.10 ATOM 229 O CYS 28 6.158 12.970 -1.447 1.00 4.10 ATOM 230 CB CYS 28 8.574 14.909 -0.923 1.00 4.70 ATOM 231 SG CYS 28 8.598 13.611 0.344 1.00 4.70 ATOM 232 N VAL 29 5.242 14.915 -2.060 1.00 3.80 ATOM 233 CA VAL 29 3.841 14.452 -2.001 1.00 3.80 ATOM 234 C VAL 29 3.367 13.915 -3.364 1.00 3.80 ATOM 235 O VAL 29 2.851 12.803 -3.443 1.00 3.80 ATOM 236 CB VAL 29 2.901 15.554 -1.471 1.00 4.40 ATOM 237 CG1 VAL 29 1.439 15.093 -1.420 1.00 4.40 ATOM 238 CG2 VAL 29 3.298 15.995 -0.054 1.00 4.40 ATOM 239 N GLU 30 3.546 14.686 -4.441 1.00 3.90 ATOM 240 CA GLU 30 3.075 14.366 -5.806 1.00 3.90 ATOM 241 C GLU 30 3.969 13.361 -6.575 1.00 3.90 ATOM 242 O GLU 30 3.617 12.897 -7.663 1.00 3.90 ATOM 243 CB GLU 30 2.897 15.675 -6.594 1.00 5.10 ATOM 244 CG GLU 30 1.774 16.547 -6.001 1.00 5.10 ATOM 245 CD GLU 30 1.525 17.856 -6.779 1.00 5.10 ATOM 246 OE1 GLU 30 2.400 18.321 -7.553 1.00 5.10 ATOM 247 OE2 GLU 30 0.431 18.451 -6.612 1.00 5.10 ATOM 248 N VAL 31 5.114 13.007 -5.990 1.00 4.10 ATOM 249 CA VAL 31 6.067 11.941 -6.354 1.00 4.10 ATOM 250 C VAL 31 6.358 11.153 -5.063 1.00 4.10 ATOM 251 O VAL 31 6.127 11.686 -3.979 1.00 4.10 ATOM 252 CB VAL 31 7.353 12.546 -6.976 1.00 4.90 ATOM 253 CG1 VAL 31 8.366 11.496 -7.447 1.00 4.90 ATOM 254 CG2 VAL 31 7.039 13.432 -8.191 1.00 4.90 ATOM 255 N ARG 32 6.825 9.897 -5.125 1.00 4.20 ATOM 256 CA ARG 32 7.038 8.980 -3.973 1.00 4.20 ATOM 257 C ARG 32 5.746 8.602 -3.231 1.00 4.20 ATOM 258 O ARG 32 5.285 7.477 -3.401 1.00 4.20 ATOM 259 CB ARG 32 8.166 9.486 -3.041 1.00 6.20 ATOM 260 CG ARG 32 9.556 9.372 -3.696 1.00 6.20 ATOM 261 CD ARG 32 10.617 10.253 -3.022 1.00 6.20 ATOM 262 NE ARG 32 10.812 9.921 -1.591 1.00 6.20 ATOM 263 CZ ARG 32 11.936 9.577 -0.984 1.00 6.20 ATOM 264 NH1 ARG 32 11.949 9.370 0.303 1.00 6.20 ATOM 265 NH2 ARG 32 13.065 9.432 -1.621 1.00 6.20 ATOM 266 N CYS 33 5.111 9.524 -2.502 1.00 4.00 ATOM 267 CA CYS 33 3.781 9.331 -1.896 1.00 4.00 ATOM 268 C CYS 33 2.721 8.939 -2.961 1.00 4.00 ATOM 269 O CYS 33 1.953 7.998 -2.757 1.00 4.00 ATOM 270 CB CYS 33 3.363 10.634 -1.189 1.00 4.50 ATOM 271 SG CYS 33 3.574 10.807 0.611 1.00 4.50 ATOM 272 N SER 34 2.691 9.614 -4.118 1.00 4.30 ATOM 273 CA SER 34 1.811 9.242 -5.246 1.00 4.30 ATOM 274 C SER 34 2.249 7.965 -5.983 1.00 4.30 ATOM 275 O SER 34 1.405 7.237 -6.505 1.00 4.30 ATOM 276 CB SER 34 1.727 10.385 -6.265 1.00 4.70 ATOM 277 OG SER 34 1.022 11.495 -5.730 1.00 4.70 ATOM 278 N ASP 35 3.549 7.657 -6.025 1.00 4.70 ATOM 279 CA ASP 35 4.061 6.460 -6.713 1.00 4.70 ATOM 280 C ASP 35 3.719 5.166 -5.960 1.00 4.70 ATOM 281 O ASP 35 3.321 4.178 -6.585 1.00 4.70 ATOM 282 CB ASP 35 5.574 6.573 -6.943 1.00 5.30 ATOM 283 CG ASP 35 5.984 7.792 -7.786 1.00 5.30 ATOM 284 OD1 ASP 35 5.245 8.191 -8.719 1.00 5.30 ATOM 285 OD2 ASP 35 7.070 8.355 -7.516 1.00 5.30 ATOM 286 N THR 36 3.780 5.167 -4.623 1.00 4.80 ATOM 287 CA THR 36 3.286 4.038 -3.817 1.00 4.80 ATOM 288 C THR 36 1.769 3.879 -3.950 1.00 4.80 ATOM 289 O THR 36 1.301 2.749 -4.078 1.00 4.80 ATOM 290 CB THR 36 3.672 4.151 -2.336 1.00 5.20 ATOM 291 OG1 THR 36 3.167 5.332 -1.759 1.00 5.20 ATOM 292 CG2 THR 36 5.184 4.104 -2.117 1.00 5.20 ATOM 293 N LYS 37 1.001 4.977 -4.034 1.00 5.10 ATOM 294 CA LYS 37 -0.453 4.955 -4.296 1.00 5.10 ATOM 295 C LYS 37 -0.808 4.326 -5.657 1.00 5.10 ATOM 296 O LYS 37 -1.824 3.640 -5.765 1.00 5.10 ATOM 297 CB LYS 37 -1.011 6.385 -4.154 1.00 6.50 ATOM 298 CG LYS 37 -2.548 6.430 -4.120 1.00 6.50 ATOM 299 CD LYS 37 -3.053 7.856 -3.856 1.00 6.50 ATOM 300 CE LYS 37 -4.587 7.875 -3.797 1.00 6.50 ATOM 301 NZ LYS 37 -5.112 9.235 -3.489 1.00 6.50 ATOM 302 N TYR 38 0.039 4.503 -6.676 1.00 5.80 ATOM 303 CA TYR 38 -0.109 3.856 -7.990 1.00 5.80 ATOM 304 C TYR 38 0.332 2.375 -7.990 1.00 5.80 ATOM 305 O TYR 38 -0.317 1.532 -8.615 1.00 5.80 ATOM 306 CB TYR 38 0.668 4.677 -9.032 1.00 7.00 ATOM 307 CG TYR 38 0.410 4.273 -10.473 1.00 7.00 ATOM 308 CD1 TYR 38 -0.768 4.702 -11.119 1.00 7.00 ATOM 309 CD2 TYR 38 1.349 3.491 -11.177 1.00 7.00 ATOM 310 CE1 TYR 38 -1.008 4.356 -12.463 1.00 7.00 ATOM 311 CE2 TYR 38 1.112 3.144 -12.522 1.00 7.00 ATOM 312 CZ TYR 38 -0.066 3.577 -13.171 1.00 7.00 ATOM 313 OH TYR 38 -0.282 3.244 -14.475 1.00 7.00 ATOM 314 N THR 39 1.409 2.039 -7.266 1.00 6.40 ATOM 315 CA THR 39 1.966 0.667 -7.166 1.00 6.40 ATOM 316 C THR 39 1.120 -0.271 -6.277 1.00 6.40 ATOM 317 O THR 39 1.105 -1.484 -6.490 1.00 6.40 ATOM 318 CB THR 39 3.422 0.725 -6.658 1.00 6.70 ATOM 319 OG1 THR 39 4.212 1.538 -7.508 1.00 6.70 ATOM 320 CG2 THR 39 4.126 -0.634 -6.625 1.00 6.70 ATOM 321 N LEU 40 0.399 0.306 -5.308 1.00 7.30 ATOM 322 CA LEU 40 -0.491 -0.281 -4.292 1.00 7.30 ATOM 323 C LEU 40 -1.118 -1.656 -4.644 1.00 7.30 ATOM 324 O LEU 40 -1.889 -1.761 -5.605 1.00 7.30 ATOM 325 CB LEU 40 -1.557 0.808 -4.029 1.00 7.80 ATOM 326 CG LEU 40 -2.456 0.648 -2.792 1.00 7.80 ATOM 327 CD1 LEU 40 -2.961 2.028 -2.360 1.00 7.80 ATOM 328 CD2 LEU 40 -3.687 -0.218 -3.058 1.00 7.80 ATOM 329 N CYS 41 -0.811 -2.676 -3.821 1.00 8.80 ATOM 330 CA CYS 41 -1.289 -4.073 -3.900 1.00 8.80 ATOM 331 C CYS 41 -1.214 -4.679 -5.329 1.00 8.80 ATOM 332 O CYS 41 -2.262 -4.878 -5.993 1.00 8.80 ATOM 333 CB CYS 41 -2.682 -4.203 -3.251 1.00 9.10 ATOM 334 SG CYS 41 -2.794 -4.283 -1.436 1.00 9.10 TER END