####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS243_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS243_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.19 1.19 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.19 1.19 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 3 - 41 0.95 1.21 LCS_AVERAGE: 92.92 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 41 41 3 3 4 11 19 35 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 38 41 41 6 15 22 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 39 41 41 9 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 39 41 41 11 27 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 39 41 41 11 25 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 39 41 41 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 39 41 41 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 39 41 41 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 39 41 41 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 39 41 41 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 39 41 41 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 39 41 41 13 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 39 41 41 12 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 39 41 41 12 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 39 41 41 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 39 41 41 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 39 41 41 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 39 41 41 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 39 41 41 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 39 41 41 4 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 39 41 41 3 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 39 41 41 3 23 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 39 41 41 4 8 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 39 41 41 10 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 39 41 41 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 39 41 41 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 39 41 41 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 39 41 41 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 39 41 41 10 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 39 41 41 10 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 39 41 41 9 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 39 41 41 12 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 39 41 41 6 24 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 39 41 41 3 20 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 39 41 41 3 9 35 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 39 41 41 10 20 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 39 41 41 12 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 39 41 41 13 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 39 41 41 10 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 39 41 41 10 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 39 41 41 3 28 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 97.64 ( 92.92 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 15 29 36 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 36.59 70.73 87.80 95.12 97.56 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.37 0.64 0.84 0.95 1.01 1.01 1.19 1.19 1.19 1.19 1.19 1.19 1.19 1.19 1.19 1.19 1.19 1.19 1.19 1.19 GDT RMS_ALL_AT 1.49 1.32 1.25 1.21 1.20 1.20 1.19 1.19 1.19 1.19 1.19 1.19 1.19 1.19 1.19 1.19 1.19 1.19 1.19 1.19 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 3.972 0 0.102 0.651 6.690 8.636 7.576 5.912 LGA Q 2 Q 2 2.246 0 0.222 0.913 4.077 51.818 30.303 3.845 LGA E 3 E 3 0.708 0 0.105 1.106 3.106 81.818 63.434 3.106 LGA T 4 T 4 1.009 0 0.042 1.057 3.501 77.727 67.013 3.501 LGA R 5 R 5 1.375 0 0.055 0.769 4.617 65.455 36.529 4.030 LGA K 6 K 6 1.074 0 0.038 1.260 5.704 73.636 47.677 5.451 LGA K 7 K 7 0.581 0 0.068 0.671 2.466 81.818 64.444 2.277 LGA C 8 C 8 0.655 0 0.027 0.770 3.194 81.818 71.212 3.194 LGA T 9 T 9 0.759 0 0.043 0.096 0.847 81.818 81.818 0.764 LGA E 10 E 10 0.317 0 0.042 0.649 2.314 95.455 70.505 2.314 LGA M 11 M 11 0.532 0 0.063 1.064 4.610 86.364 68.182 4.610 LGA K 12 K 12 0.536 0 0.072 0.687 2.456 81.818 76.162 2.266 LGA K 13 K 13 0.372 0 0.037 0.579 1.379 90.909 86.263 1.207 LGA K 14 K 14 0.558 0 0.112 0.977 6.525 86.364 54.949 6.525 LGA F 15 F 15 0.309 0 0.139 0.270 2.163 90.909 68.595 2.163 LGA K 16 K 16 0.883 0 0.098 1.306 5.994 77.727 49.091 5.994 LGA N 17 N 17 1.070 0 0.035 0.502 2.032 69.545 68.182 2.032 LGA C 18 C 18 1.173 0 0.026 0.056 1.189 65.455 65.455 1.099 LGA E 19 E 19 1.490 0 0.173 0.414 3.983 69.545 44.646 3.323 LGA V 20 V 20 0.922 0 0.101 0.121 1.500 73.636 68.052 1.500 LGA R 21 R 21 0.920 0 0.059 1.126 3.494 81.818 55.702 1.262 LGA C 22 C 22 1.547 0 0.089 0.872 4.569 61.818 50.000 4.569 LGA D 23 D 23 1.729 0 0.300 1.076 4.567 42.727 34.773 2.841 LGA E 24 E 24 0.643 0 0.044 0.627 3.116 82.273 56.768 2.888 LGA S 25 S 25 1.011 0 0.058 0.719 3.241 70.455 60.909 3.241 LGA N 26 N 26 0.717 0 0.034 1.170 4.846 81.818 58.182 4.846 LGA H 27 H 27 0.404 0 0.115 0.292 0.889 100.000 90.909 0.731 LGA C 28 C 28 0.274 0 0.157 0.215 0.884 95.455 96.970 0.432 LGA V 29 V 29 0.738 0 0.082 1.085 3.123 81.818 66.494 2.128 LGA E 30 E 30 0.711 0 0.044 0.614 1.739 77.727 74.747 1.739 LGA V 31 V 31 0.778 0 0.024 0.068 1.139 77.727 72.468 1.139 LGA R 32 R 32 0.652 0 0.154 1.048 3.972 86.364 64.298 3.972 LGA C 33 C 33 1.196 0 0.483 0.540 3.287 50.000 55.152 1.054 LGA S 34 S 34 1.240 0 0.065 0.694 2.924 65.909 59.394 2.924 LGA D 35 D 35 1.741 0 0.112 1.038 2.574 65.909 54.318 2.574 LGA T 36 T 36 1.702 0 0.200 1.064 5.087 70.000 48.052 5.087 LGA K 37 K 37 0.520 0 0.090 1.464 6.665 86.818 55.556 6.665 LGA Y 38 Y 38 0.312 0 0.068 1.229 8.804 100.000 48.939 8.804 LGA T 39 T 39 0.913 0 0.087 0.077 1.236 81.818 74.805 1.236 LGA L 40 L 40 1.087 0 0.072 0.958 2.186 69.545 64.091 2.186 LGA C 41 C 41 1.333 0 0.363 0.561 2.718 58.182 55.844 1.201 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 1.188 1.265 2.133 75.133 60.694 32.106 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 41 1.19 91.463 96.128 3.183 LGA_LOCAL RMSD: 1.188 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.188 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 1.188 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.558368 * X + -0.767477 * Y + -0.314966 * Z + 9.098640 Y_new = -0.633121 * X + -0.148886 * Y + -0.759599 * Z + -12.876376 Z_new = 0.536081 * X + 0.623548 * Y + -0.569039 * Z + -4.788676 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.848055 -0.565787 2.310520 [DEG: -48.5900 -32.4172 132.3830 ] ZXZ: -0.393070 2.176133 0.710114 [DEG: -22.5213 124.6833 40.6865 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS243_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS243_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 41 1.19 96.128 1.19 REMARK ---------------------------------------------------------- MOLECULE T0955TS243_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 N SER 1 -3.931 -12.200 1.783 1.00 3.39 ATOM 2 CA SER 1 -2.660 -12.933 1.592 1.00 3.39 ATOM 3 C SER 1 -1.567 -12.234 2.332 1.00 3.39 ATOM 4 O SER 1 -1.653 -11.033 2.584 1.00 3.39 ATOM 8 CB SER 1 -2.326 -13.049 0.103 1.00 3.39 ATOM 10 OG SER 1 -2.037 -11.779 -0.456 1.00 3.39 ATOM 11 N GLN 2 -0.530 -12.995 2.735 1.00 3.21 ATOM 12 CA GLN 2 0.593 -12.448 3.438 1.00 3.21 ATOM 13 C GLN 2 1.344 -11.557 2.508 1.00 3.21 ATOM 14 O GLN 2 1.889 -10.528 2.908 1.00 3.21 ATOM 16 CB GLN 2 1.483 -13.568 3.982 1.00 3.21 ATOM 17 CD GLN 2 2.168 -12.389 6.108 1.00 3.21 ATOM 18 CG GLN 2 2.637 -13.081 4.843 1.00 3.21 ATOM 19 OE1 GLN 2 1.084 -12.674 6.618 1.00 3.21 ATOM 22 NE2 GLN 2 2.985 -11.475 6.618 1.00 3.21 ATOM 23 N GLU 3 1.388 -11.948 1.224 1.00 2.66 ATOM 24 CA GLU 3 2.156 -11.257 0.234 1.00 2.66 ATOM 25 C GLU 3 1.660 -9.847 0.116 1.00 2.66 ATOM 26 O GLU 3 2.440 -8.896 0.154 1.00 2.66 ATOM 28 CB GLU 3 2.075 -11.982 -1.110 1.00 2.66 ATOM 29 CD GLU 3 2.815 -12.099 -3.523 1.00 2.66 ATOM 30 CG GLU 3 2.895 -11.335 -2.215 1.00 2.66 ATOM 31 OE1 GLU 3 2.101 -13.122 -3.570 1.00 2.66 ATOM 32 OE2 GLU 3 3.467 -11.673 -4.499 1.00 2.66 ATOM 33 N THR 4 0.334 -9.670 -0.002 1.00 2.76 ATOM 34 CA THR 4 -0.199 -8.348 -0.150 1.00 2.76 ATOM 35 C THR 4 0.020 -7.599 1.124 1.00 2.76 ATOM 36 O THR 4 0.398 -6.429 1.112 1.00 2.76 ATOM 38 CB THR 4 -1.696 -8.380 -0.513 1.00 2.76 ATOM 40 OG1 THR 4 -2.425 -9.059 0.517 1.00 2.76 ATOM 41 CG2 THR 4 -1.909 -9.116 -1.827 1.00 2.76 ATOM 42 N ARG 5 -0.195 -8.273 2.270 1.00 2.78 ATOM 43 CA ARG 5 -0.097 -7.601 3.526 1.00 2.78 ATOM 44 C ARG 5 1.302 -7.149 3.754 1.00 2.78 ATOM 45 O ARG 5 1.514 -6.039 4.234 1.00 2.78 ATOM 47 CB ARG 5 -0.560 -8.516 4.661 1.00 2.78 ATOM 48 CD ARG 5 -2.489 -9.420 5.987 1.00 2.78 ATOM 50 NE ARG 5 -1.889 -10.740 6.163 1.00 2.78 ATOM 51 CG ARG 5 -2.059 -8.766 4.684 1.00 2.78 ATOM 52 CZ ARG 5 -2.420 -11.869 5.704 1.00 2.78 ATOM 55 NH1 ARG 5 -1.801 -13.024 5.911 1.00 2.78 ATOM 58 NH2 ARG 5 -3.567 -11.841 5.040 1.00 2.78 ATOM 59 N LYS 6 2.310 -7.969 3.426 1.00 2.73 ATOM 60 CA LYS 6 3.632 -7.498 3.705 1.00 2.73 ATOM 61 C LYS 6 3.897 -6.279 2.877 1.00 2.73 ATOM 62 O LYS 6 4.463 -5.301 3.366 1.00 2.73 ATOM 64 CB LYS 6 4.662 -8.595 3.425 1.00 2.73 ATOM 65 CD LYS 6 5.662 -10.805 4.069 1.00 2.73 ATOM 66 CE LYS 6 5.620 -11.962 5.053 1.00 2.73 ATOM 67 CG LYS 6 4.630 -9.745 4.417 1.00 2.73 ATOM 71 NZ LYS 6 6.597 -13.028 4.699 1.00 2.73 ATOM 72 N LYS 7 3.486 -6.300 1.593 1.00 2.59 ATOM 73 CA LYS 7 3.732 -5.184 0.726 1.00 2.59 ATOM 74 C LYS 7 2.982 -3.983 1.223 1.00 2.59 ATOM 75 O LYS 7 3.530 -2.883 1.282 1.00 2.59 ATOM 77 CB LYS 7 3.327 -5.522 -0.711 1.00 2.59 ATOM 78 CD LYS 7 3.770 -6.832 -2.805 1.00 2.59 ATOM 79 CE LYS 7 4.674 -7.848 -3.481 1.00 2.59 ATOM 80 CG LYS 7 4.241 -6.528 -1.392 1.00 2.59 ATOM 84 NZ LYS 7 4.202 -8.188 -4.851 1.00 2.59 ATOM 85 N CYS 8 1.705 -4.170 1.607 1.00 2.74 ATOM 86 CA CYS 8 0.884 -3.088 2.078 1.00 2.74 ATOM 87 C CYS 8 1.452 -2.562 3.360 1.00 2.74 ATOM 88 O CYS 8 1.560 -1.353 3.552 1.00 2.74 ATOM 90 CB CYS 8 -0.561 -3.555 2.265 1.00 2.74 ATOM 91 SG CYS 8 -1.440 -3.901 0.724 1.00 2.74 ATOM 92 N THR 9 1.846 -3.472 4.268 1.00 2.76 ATOM 93 CA THR 9 2.347 -3.100 5.557 1.00 2.76 ATOM 94 C THR 9 3.598 -2.302 5.386 1.00 2.76 ATOM 95 O THR 9 3.773 -1.276 6.041 1.00 2.76 ATOM 97 CB THR 9 2.615 -4.336 6.437 1.00 2.76 ATOM 99 OG1 THR 9 1.389 -5.045 6.653 1.00 2.76 ATOM 100 CG2 THR 9 3.180 -3.918 7.785 1.00 2.76 ATOM 101 N GLU 10 4.504 -2.744 4.499 1.00 2.70 ATOM 102 CA GLU 10 5.729 -2.019 4.311 1.00 2.70 ATOM 103 C GLU 10 5.421 -0.690 3.712 1.00 2.70 ATOM 104 O GLU 10 5.998 0.328 4.098 1.00 2.70 ATOM 106 CB GLU 10 6.692 -2.814 3.428 1.00 2.70 ATOM 107 CD GLU 10 8.146 -4.862 3.158 1.00 2.70 ATOM 108 CG GLU 10 7.244 -4.070 4.084 1.00 2.70 ATOM 109 OE1 GLU 10 8.189 -4.541 1.952 1.00 2.70 ATOM 110 OE2 GLU 10 8.808 -5.806 3.639 1.00 2.70 ATOM 111 N MET 11 4.476 -0.668 2.755 1.00 2.84 ATOM 112 CA MET 11 4.158 0.534 2.043 1.00 2.84 ATOM 113 C MET 11 3.643 1.555 3.003 1.00 2.84 ATOM 114 O MET 11 3.943 2.742 2.874 1.00 2.84 ATOM 116 CB MET 11 3.135 0.250 0.941 1.00 2.84 ATOM 117 SD MET 11 4.277 1.927 -0.945 1.00 2.84 ATOM 118 CE MET 11 3.715 3.496 -1.602 1.00 2.84 ATOM 119 CG MET 11 2.847 1.439 0.039 1.00 2.84 ATOM 120 N LYS 12 2.843 1.126 3.993 1.00 2.66 ATOM 121 CA LYS 12 2.306 2.095 4.905 1.00 2.66 ATOM 122 C LYS 12 3.441 2.749 5.629 1.00 2.66 ATOM 123 O LYS 12 3.447 3.966 5.815 1.00 2.66 ATOM 125 CB LYS 12 1.331 1.432 5.878 1.00 2.66 ATOM 126 CD LYS 12 -0.889 0.323 6.259 1.00 2.66 ATOM 127 CE LYS 12 -2.190 -0.132 5.620 1.00 2.66 ATOM 128 CG LYS 12 0.023 0.990 5.242 1.00 2.66 ATOM 132 NZ LYS 12 -3.076 -0.826 6.595 1.00 2.66 ATOM 133 N LYS 13 4.449 1.955 6.037 1.00 2.75 ATOM 134 CA LYS 13 5.567 2.490 6.761 1.00 2.75 ATOM 135 C LYS 13 6.284 3.487 5.908 1.00 2.75 ATOM 136 O LYS 13 6.641 4.567 6.376 1.00 2.75 ATOM 138 CB LYS 13 6.509 1.366 7.199 1.00 2.75 ATOM 139 CD LYS 13 6.925 -0.627 8.667 1.00 2.75 ATOM 140 CE LYS 13 6.357 -1.524 9.755 1.00 2.75 ATOM 141 CG LYS 13 5.947 0.478 8.296 1.00 2.75 ATOM 145 NZ LYS 13 7.285 -2.636 10.099 1.00 2.75 ATOM 146 N LYS 14 6.508 3.156 4.624 1.00 2.85 ATOM 147 CA LYS 14 7.251 4.050 3.785 1.00 2.85 ATOM 148 C LYS 14 6.518 5.350 3.726 1.00 2.85 ATOM 149 O LYS 14 7.107 6.404 3.971 1.00 2.85 ATOM 151 CB LYS 14 7.441 3.445 2.393 1.00 2.85 ATOM 152 CD LYS 14 8.428 3.639 0.093 1.00 2.85 ATOM 153 CE LYS 14 9.193 4.530 -0.872 1.00 2.85 ATOM 154 CG LYS 14 8.235 4.321 1.439 1.00 2.85 ATOM 158 NZ LYS 14 9.389 3.874 -2.196 1.00 2.85 ATOM 159 N PHE 15 5.205 5.317 3.413 1.00 2.72 ATOM 160 CA PHE 15 4.463 6.544 3.341 1.00 2.72 ATOM 161 C PHE 15 3.401 6.511 4.393 1.00 2.72 ATOM 162 O PHE 15 2.226 6.283 4.103 1.00 2.72 ATOM 164 CB PHE 15 3.866 6.730 1.944 1.00 2.72 ATOM 165 CG PHE 15 4.893 6.784 0.850 1.00 2.72 ATOM 166 CZ PHE 15 6.794 6.891 -1.176 1.00 2.72 ATOM 167 CD1 PHE 15 5.231 5.644 0.140 1.00 2.72 ATOM 168 CE1 PHE 15 6.176 5.694 -0.867 1.00 2.72 ATOM 169 CD2 PHE 15 5.521 7.974 0.529 1.00 2.72 ATOM 170 CE2 PHE 15 6.466 8.024 -0.479 1.00 2.72 ATOM 171 N LYS 16 3.792 6.815 5.643 1.00 2.99 ATOM 172 CA LYS 16 2.902 6.781 6.768 1.00 2.99 ATOM 173 C LYS 16 1.852 7.827 6.572 1.00 2.99 ATOM 174 O LYS 16 0.701 7.656 6.970 1.00 2.99 ATOM 176 CB LYS 16 3.676 7.000 8.069 1.00 2.99 ATOM 177 CD LYS 16 5.266 6.098 9.789 1.00 2.99 ATOM 178 CE LYS 16 6.049 4.880 10.253 1.00 2.99 ATOM 179 CG LYS 16 4.569 5.835 8.464 1.00 2.99 ATOM 183 NZ LYS 16 7.198 4.582 9.354 1.00 2.99 ATOM 184 N ASN 17 2.243 8.957 5.963 1.00 2.66 ATOM 185 CA ASN 17 1.373 10.074 5.730 1.00 2.66 ATOM 186 C ASN 17 0.326 9.751 4.705 1.00 2.66 ATOM 187 O ASN 17 -0.744 10.359 4.698 1.00 2.66 ATOM 189 CB ASN 17 2.180 11.301 5.302 1.00 2.66 ATOM 190 CG ASN 17 2.955 11.919 6.448 1.00 2.66 ATOM 191 OD1 ASN 17 2.617 11.723 7.616 1.00 2.66 ATOM 194 ND2 ASN 17 4.000 12.670 6.119 1.00 2.66 ATOM 195 N CYS 18 0.605 8.812 3.778 1.00 2.66 ATOM 196 CA CYS 18 -0.337 8.566 2.723 1.00 2.66 ATOM 197 C CYS 18 -1.303 7.483 3.100 1.00 2.66 ATOM 198 O CYS 18 -1.013 6.630 3.936 1.00 2.66 ATOM 200 CB CYS 18 0.391 8.192 1.430 1.00 2.66 ATOM 201 SG CYS 18 1.431 9.507 0.752 1.00 2.66 ATOM 202 N GLU 19 -2.506 7.514 2.486 1.00 2.61 ATOM 203 CA GLU 19 -3.485 6.496 2.737 1.00 2.61 ATOM 204 C GLU 19 -3.279 5.439 1.699 1.00 2.61 ATOM 205 O GLU 19 -3.460 5.674 0.504 1.00 2.61 ATOM 207 CB GLU 19 -4.896 7.088 2.696 1.00 2.61 ATOM 208 CD GLU 19 -7.378 6.714 2.980 1.00 2.61 ATOM 209 CG GLU 19 -5.996 6.088 3.009 1.00 2.61 ATOM 210 OE1 GLU 19 -7.464 7.955 2.875 1.00 2.61 ATOM 211 OE2 GLU 19 -8.372 5.963 3.064 1.00 2.61 ATOM 212 N VAL 20 -2.893 4.227 2.141 1.00 2.45 ATOM 213 CA VAL 20 -2.598 3.192 1.199 1.00 2.45 ATOM 214 C VAL 20 -3.688 2.170 1.245 1.00 2.45 ATOM 215 O VAL 20 -4.114 1.735 2.315 1.00 2.45 ATOM 217 CB VAL 20 -1.226 2.549 1.480 1.00 2.45 ATOM 218 CG1 VAL 20 -0.960 1.415 0.502 1.00 2.45 ATOM 219 CG2 VAL 20 -0.124 3.593 1.404 1.00 2.45 ATOM 220 N ARG 21 -4.170 1.765 0.056 1.00 2.40 ATOM 221 CA ARG 21 -5.236 0.812 -0.022 1.00 2.40 ATOM 222 C ARG 21 -4.678 -0.444 -0.602 1.00 2.40 ATOM 223 O ARG 21 -3.956 -0.416 -1.598 1.00 2.40 ATOM 225 CB ARG 21 -6.389 1.365 -0.861 1.00 2.40 ATOM 226 CD ARG 21 -8.718 1.073 -1.750 1.00 2.40 ATOM 228 NE ARG 21 -9.864 0.177 -1.885 1.00 2.40 ATOM 229 CG ARG 21 -7.580 0.428 -0.975 1.00 2.40 ATOM 230 CZ ARG 21 -10.979 0.484 -2.540 1.00 2.40 ATOM 233 NH1 ARG 21 -11.970 -0.395 -2.611 1.00 2.40 ATOM 236 NH2 ARG 21 -11.101 1.668 -3.123 1.00 2.40 ATOM 237 N CYS 22 -5.005 -1.595 0.021 1.00 2.54 ATOM 238 CA CYS 22 -4.507 -2.845 -0.464 1.00 2.54 ATOM 239 C CYS 22 -5.642 -3.602 -1.079 1.00 2.54 ATOM 240 O CYS 22 -6.688 -3.795 -0.462 1.00 2.54 ATOM 242 CB CYS 22 -3.853 -3.639 0.669 1.00 2.54 ATOM 243 SG CYS 22 -3.183 -5.241 0.168 1.00 2.54 ATOM 244 N ASP 23 -5.449 -4.039 -2.338 1.00 2.58 ATOM 245 CA ASP 23 -6.434 -4.807 -3.043 1.00 2.58 ATOM 246 C ASP 23 -5.926 -6.216 -3.028 1.00 2.58 ATOM 247 O ASP 23 -5.048 -6.572 -3.799 1.00 2.58 ATOM 249 CB ASP 23 -6.632 -4.256 -4.456 1.00 2.58 ATOM 250 CG ASP 23 -7.701 -5.004 -5.229 1.00 2.58 ATOM 251 OD1 ASP 23 -8.189 -6.035 -4.721 1.00 2.58 ATOM 252 OD2 ASP 23 -8.050 -4.560 -6.344 1.00 2.58 ATOM 253 N GLU 24 -6.467 -7.056 -2.130 1.00 2.93 ATOM 254 CA GLU 24 -5.978 -8.397 -1.976 1.00 2.93 ATOM 255 C GLU 24 -6.267 -9.220 -3.195 1.00 2.93 ATOM 256 O GLU 24 -5.475 -10.087 -3.564 1.00 2.93 ATOM 258 CB GLU 24 -6.596 -9.055 -0.741 1.00 2.93 ATOM 259 CD GLU 24 -6.801 -9.100 1.777 1.00 2.93 ATOM 260 CG GLU 24 -6.123 -8.465 0.578 1.00 2.93 ATOM 261 OE1 GLU 24 -7.772 -9.859 1.577 1.00 2.93 ATOM 262 OE2 GLU 24 -6.360 -8.837 2.916 1.00 2.93 ATOM 263 N SER 25 -7.414 -8.996 -3.856 1.00 2.67 ATOM 264 CA SER 25 -7.739 -9.845 -4.968 1.00 2.67 ATOM 265 C SER 25 -6.670 -9.745 -6.010 1.00 2.67 ATOM 266 O SER 25 -6.145 -10.762 -6.463 1.00 2.67 ATOM 268 CB SER 25 -9.102 -9.467 -5.551 1.00 2.67 ATOM 270 OG SER 25 -9.425 -10.282 -6.664 1.00 2.67 ATOM 271 N ASN 26 -6.356 -8.508 -6.437 1.00 2.68 ATOM 272 CA ASN 26 -5.349 -8.249 -7.424 1.00 2.68 ATOM 273 C ASN 26 -3.976 -8.296 -6.816 1.00 2.68 ATOM 274 O ASN 26 -2.984 -8.454 -7.534 1.00 2.68 ATOM 276 CB ASN 26 -5.594 -6.899 -8.099 1.00 2.68 ATOM 277 CG ASN 26 -6.803 -6.916 -9.015 1.00 2.68 ATOM 278 OD1 ASN 26 -7.209 -7.971 -9.502 1.00 2.68 ATOM 281 ND2 ASN 26 -7.381 -5.745 -9.251 1.00 2.68 ATOM 282 N HIS 27 -3.853 -8.177 -5.477 1.00 2.68 ATOM 283 CA HIS 27 -2.544 -8.136 -4.884 1.00 2.68 ATOM 284 C HIS 27 -1.837 -6.896 -5.351 1.00 2.68 ATOM 285 O HIS 27 -0.698 -6.941 -5.818 1.00 2.68 ATOM 287 CB HIS 27 -1.753 -9.396 -5.246 1.00 2.68 ATOM 288 CG HIS 27 -2.388 -10.665 -4.770 1.00 2.68 ATOM 289 ND1 HIS 27 -2.451 -11.013 -3.438 1.00 2.68 ATOM 290 CE1 HIS 27 -3.075 -12.199 -3.325 1.00 2.68 ATOM 291 CD2 HIS 27 -3.052 -11.794 -5.405 1.00 2.68 ATOM 293 NE2 HIS 27 -3.438 -12.674 -4.501 1.00 2.68 ATOM 294 N CYS 28 -2.521 -5.739 -5.254 1.00 2.55 ATOM 295 CA CYS 28 -1.901 -4.491 -5.609 1.00 2.55 ATOM 296 C CYS 28 -2.178 -3.499 -4.519 1.00 2.55 ATOM 297 O CYS 28 -3.089 -3.676 -3.707 1.00 2.55 ATOM 299 CB CYS 28 -2.422 -3.999 -6.962 1.00 2.55 ATOM 300 SG CYS 28 -2.120 -5.135 -8.336 1.00 2.55 ATOM 301 N VAL 29 -1.363 -2.425 -4.439 1.00 2.47 ATOM 302 CA VAL 29 -1.646 -1.416 -3.455 1.00 2.47 ATOM 303 C VAL 29 -1.652 -0.086 -4.138 1.00 2.47 ATOM 304 O VAL 29 -0.721 0.260 -4.869 1.00 2.47 ATOM 306 CB VAL 29 -0.626 -1.451 -2.302 1.00 2.47 ATOM 307 CG1 VAL 29 0.784 -1.236 -2.831 1.00 2.47 ATOM 308 CG2 VAL 29 -0.971 -0.404 -1.254 1.00 2.47 ATOM 309 N GLU 30 -2.713 0.711 -3.907 1.00 2.34 ATOM 310 CA GLU 30 -2.765 1.986 -4.558 1.00 2.34 ATOM 311 C GLU 30 -2.403 3.031 -3.558 1.00 2.34 ATOM 312 O GLU 30 -2.885 3.029 -2.424 1.00 2.34 ATOM 314 CB GLU 30 -4.154 2.229 -5.152 1.00 2.34 ATOM 315 CD GLU 30 -5.665 3.733 -6.506 1.00 2.34 ATOM 316 CG GLU 30 -4.285 3.541 -5.908 1.00 2.34 ATOM 317 OE1 GLU 30 -6.553 2.900 -6.229 1.00 2.34 ATOM 318 OE2 GLU 30 -5.857 4.716 -7.252 1.00 2.34 ATOM 319 N VAL 31 -1.521 3.959 -3.975 1.00 2.54 ATOM 320 CA VAL 31 -1.056 5.004 -3.112 1.00 2.54 ATOM 321 C VAL 31 -1.713 6.276 -3.538 1.00 2.54 ATOM 322 O VAL 31 -1.724 6.621 -4.721 1.00 2.54 ATOM 324 CB VAL 31 0.479 5.123 -3.144 1.00 2.54 ATOM 325 CG1 VAL 31 0.943 6.274 -2.265 1.00 2.54 ATOM 326 CG2 VAL 31 1.123 3.817 -2.702 1.00 2.54 ATOM 327 N ARG 32 -2.278 7.014 -2.564 1.00 2.67 ATOM 328 CA ARG 32 -2.933 8.248 -2.877 1.00 2.67 ATOM 329 C ARG 32 -2.092 9.339 -2.299 1.00 2.67 ATOM 330 O ARG 32 -1.911 9.425 -1.085 1.00 2.67 ATOM 332 CB ARG 32 -4.359 8.254 -2.323 1.00 2.67 ATOM 333 CD ARG 32 -6.567 9.432 -2.137 1.00 2.67 ATOM 335 NE ARG 32 -7.321 8.549 -3.024 1.00 2.67 ATOM 336 CG ARG 32 -5.111 9.554 -2.557 1.00 2.67 ATOM 337 CZ ARG 32 -8.554 8.118 -2.778 1.00 2.67 ATOM 340 NH1 ARG 32 -9.161 7.317 -3.642 1.00 2.67 ATOM 343 NH2 ARG 32 -9.177 8.489 -1.668 1.00 2.67 ATOM 344 N CYS 33 -1.550 10.204 -3.176 1.00 3.04 ATOM 345 CA CYS 33 -0.696 11.270 -2.749 1.00 3.04 ATOM 346 C CYS 33 -1.236 12.513 -3.367 1.00 3.04 ATOM 347 O CYS 33 -2.162 12.469 -4.178 1.00 3.04 ATOM 349 CB CYS 33 0.752 10.991 -3.156 1.00 3.04 ATOM 350 SG CYS 33 1.434 9.456 -2.488 1.00 3.04 ATOM 351 N SER 34 -0.692 13.675 -2.969 1.00 3.36 ATOM 352 CA SER 34 -1.164 14.901 -3.531 1.00 3.36 ATOM 353 C SER 34 -0.845 14.929 -4.998 1.00 3.36 ATOM 354 O SER 34 -1.727 15.121 -5.833 1.00 3.36 ATOM 356 CB SER 34 -0.538 16.096 -2.809 1.00 3.36 ATOM 358 OG SER 34 -0.981 17.320 -3.371 1.00 3.36 ATOM 359 N ASP 35 0.443 14.738 -5.338 1.00 3.17 ATOM 360 CA ASP 35 0.887 14.831 -6.700 1.00 3.17 ATOM 361 C ASP 35 0.371 13.721 -7.567 1.00 3.17 ATOM 362 O ASP 35 -0.199 13.981 -8.625 1.00 3.17 ATOM 364 CB ASP 35 2.415 14.843 -6.767 1.00 3.17 ATOM 365 CG ASP 35 3.011 16.140 -6.255 1.00 3.17 ATOM 366 OD1 ASP 35 2.254 17.123 -6.106 1.00 3.17 ATOM 367 OD2 ASP 35 4.233 16.173 -6.002 1.00 3.17 ATOM 368 N THR 36 0.528 12.442 -7.150 1.00 3.01 ATOM 369 CA THR 36 0.139 11.398 -8.055 1.00 3.01 ATOM 370 C THR 36 -0.156 10.156 -7.257 1.00 3.01 ATOM 371 O THR 36 0.155 10.083 -6.072 1.00 3.01 ATOM 373 CB THR 36 1.232 11.124 -9.105 1.00 3.01 ATOM 375 OG1 THR 36 0.714 10.259 -10.123 1.00 3.01 ATOM 376 CG2 THR 36 2.434 10.453 -8.461 1.00 3.01 ATOM 377 N LYS 37 -0.784 9.150 -7.904 1.00 2.93 ATOM 378 CA LYS 37 -1.083 7.907 -7.254 1.00 2.93 ATOM 379 C LYS 37 -0.220 6.869 -7.899 1.00 2.93 ATOM 380 O LYS 37 -0.070 6.842 -9.121 1.00 2.93 ATOM 382 CB LYS 37 -2.574 7.584 -7.374 1.00 2.93 ATOM 383 CD LYS 37 -4.941 8.160 -6.771 1.00 2.93 ATOM 384 CE LYS 37 -5.852 9.164 -6.084 1.00 2.93 ATOM 385 CG LYS 37 -3.482 8.566 -6.650 1.00 2.93 ATOM 389 NZ LYS 37 -7.290 8.803 -6.233 1.00 2.93 ATOM 390 N TYR 38 0.384 5.978 -7.090 1.00 3.34 ATOM 391 CA TYR 38 1.213 4.959 -7.664 1.00 3.34 ATOM 392 C TYR 38 0.582 3.651 -7.321 1.00 3.34 ATOM 393 O TYR 38 0.135 3.444 -6.192 1.00 3.34 ATOM 395 CB TYR 38 2.644 5.074 -7.136 1.00 3.34 ATOM 396 CG TYR 38 3.580 4.014 -7.673 1.00 3.34 ATOM 398 OH TYR 38 6.156 1.109 -9.160 1.00 3.34 ATOM 399 CZ TYR 38 5.304 2.069 -8.666 1.00 3.34 ATOM 400 CD1 TYR 38 4.079 4.094 -8.967 1.00 3.34 ATOM 401 CE1 TYR 38 4.935 3.130 -9.465 1.00 3.34 ATOM 402 CD2 TYR 38 3.964 2.938 -6.882 1.00 3.34 ATOM 403 CE2 TYR 38 4.819 1.965 -7.364 1.00 3.34 ATOM 404 N THR 39 0.518 2.725 -8.295 1.00 2.96 ATOM 405 CA THR 39 -0.012 1.430 -7.996 1.00 2.96 ATOM 406 C THR 39 1.182 0.551 -7.838 1.00 2.96 ATOM 407 O THR 39 1.915 0.308 -8.795 1.00 2.96 ATOM 409 CB THR 39 -0.966 0.941 -9.102 1.00 2.96 ATOM 411 OG1 THR 39 -2.068 1.848 -9.222 1.00 2.96 ATOM 412 CG2 THR 39 -1.506 -0.441 -8.769 1.00 2.96 ATOM 413 N LEU 40 1.414 0.050 -6.614 1.00 3.33 ATOM 414 CA LEU 40 2.606 -0.721 -6.413 1.00 3.33 ATOM 415 C LEU 40 2.262 -2.162 -6.567 1.00 3.33 ATOM 416 O LEU 40 1.419 -2.699 -5.850 1.00 3.33 ATOM 418 CB LEU 40 3.208 -0.429 -5.037 1.00 3.33 ATOM 419 CG LEU 40 4.463 -1.220 -4.665 1.00 3.33 ATOM 420 CD1 LEU 40 5.615 -0.868 -5.593 1.00 3.33 ATOM 421 CD2 LEU 40 4.853 -0.961 -3.217 1.00 3.33 ATOM 422 N CYS 41 2.919 -2.832 -7.535 1.00 3.36 ATOM 423 CA CYS 41 2.669 -4.226 -7.725 1.00 3.36 ATOM 424 C CYS 41 3.943 -4.944 -7.306 1.00 3.36 ATOM 425 O CYS 41 3.936 -6.201 -7.267 1.00 3.36 ATOM 427 OXT CYS 41 4.952 -4.252 -7.016 1.00 3.36 ATOM 428 CB CYS 41 2.282 -4.508 -9.178 1.00 3.36 ATOM 429 SG CYS 41 0.772 -3.676 -9.723 1.00 3.36 TER END