####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS214_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS214_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.57 1.57 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.57 1.57 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 17 - 41 0.90 1.74 LCS_AVERAGE: 50.74 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 41 41 3 3 10 20 32 38 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 15 41 41 8 13 18 28 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 15 41 41 8 13 18 33 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 15 41 41 9 13 18 34 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 15 41 41 9 13 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 15 41 41 9 13 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 15 41 41 9 13 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 15 41 41 9 13 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 15 41 41 11 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 15 41 41 9 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 15 41 41 9 18 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 15 41 41 9 21 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 15 41 41 9 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 15 41 41 9 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 15 41 41 6 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 15 41 41 3 5 16 24 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 25 41 41 11 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 25 41 41 11 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 25 41 41 11 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 25 41 41 8 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 25 41 41 11 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 25 41 41 9 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 25 41 41 9 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 25 41 41 11 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 25 41 41 11 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 25 41 41 6 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 25 41 41 6 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 25 41 41 4 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 25 41 41 10 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 25 41 41 6 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 25 41 41 11 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 25 41 41 11 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 25 41 41 6 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 25 41 41 3 5 26 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 25 41 41 7 21 31 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 25 41 41 5 20 31 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 25 41 41 10 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 25 41 41 11 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 25 41 41 11 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 25 41 41 10 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 25 41 41 6 22 31 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 83.58 ( 50.74 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 22 32 36 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 26.83 53.66 78.05 87.80 90.24 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.40 0.63 0.99 1.11 1.18 1.45 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 GDT RMS_ALL_AT 1.82 1.81 1.66 1.68 1.65 1.58 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 10 E 10 # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 3.944 0 0.170 0.811 6.700 8.636 6.970 4.537 LGA Q 2 Q 2 2.968 0 0.236 1.193 4.664 27.727 19.192 4.664 LGA E 3 E 3 2.783 0 0.038 1.486 8.299 30.000 15.354 7.057 LGA T 4 T 4 2.360 0 0.031 1.101 4.395 41.818 41.818 4.395 LGA R 5 R 5 1.258 0 0.018 0.287 2.890 65.909 54.876 2.553 LGA K 6 K 6 1.109 0 0.009 1.264 7.566 69.545 40.202 7.463 LGA K 7 K 7 1.732 0 0.063 1.004 4.393 50.909 37.980 2.431 LGA C 8 C 8 1.660 0 0.047 0.750 4.422 54.545 45.758 4.422 LGA T 9 T 9 0.915 0 0.027 0.106 1.144 77.727 82.078 0.394 LGA E 10 E 10 0.536 0 0.031 0.979 5.302 81.818 49.091 5.302 LGA M 11 M 11 1.501 0 0.095 1.012 5.077 54.545 41.364 5.077 LGA K 12 K 12 1.724 0 0.053 0.630 1.997 50.909 59.394 1.628 LGA K 13 K 13 1.202 0 0.064 0.645 1.267 65.455 70.909 1.083 LGA K 14 K 14 1.125 0 0.047 0.611 2.886 69.545 66.667 2.886 LGA F 15 F 15 1.175 0 0.113 0.422 3.232 69.545 54.545 2.940 LGA K 16 K 16 2.916 0 0.653 1.589 6.982 23.636 14.343 6.982 LGA N 17 N 17 0.383 0 0.264 0.549 2.122 100.000 77.500 2.122 LGA C 18 C 18 0.630 0 0.012 0.027 0.762 81.818 81.818 0.673 LGA E 19 E 19 0.662 0 0.228 0.453 1.855 81.818 76.566 0.656 LGA V 20 V 20 1.146 0 0.057 0.090 1.274 65.455 65.455 1.107 LGA R 21 R 21 0.807 0 0.038 1.276 3.081 81.818 65.620 3.081 LGA C 22 C 22 1.266 0 0.097 0.883 4.266 65.455 53.030 4.266 LGA D 23 D 23 1.333 0 0.307 1.060 4.027 43.636 37.727 2.681 LGA E 24 E 24 1.198 0 0.076 0.571 3.715 69.545 47.475 2.994 LGA S 25 S 25 1.603 0 0.070 0.099 2.156 54.545 49.091 2.156 LGA N 26 N 26 1.558 0 0.030 1.179 4.973 58.182 43.864 4.973 LGA H 27 H 27 0.752 0 0.064 0.242 1.086 81.818 80.182 0.709 LGA C 28 C 28 0.941 0 0.164 0.223 1.303 77.727 73.636 1.303 LGA V 29 V 29 0.788 0 0.068 0.116 1.406 77.727 72.468 1.302 LGA E 30 E 30 0.878 0 0.073 0.627 2.112 77.727 68.081 1.768 LGA V 31 V 31 0.810 0 0.060 0.109 0.895 81.818 81.818 0.857 LGA R 32 R 32 0.730 0 0.144 0.988 7.449 81.818 44.298 7.449 LGA C 33 C 33 0.590 0 0.551 0.669 3.360 61.818 71.515 0.652 LGA S 34 S 34 1.905 0 0.333 0.611 3.266 47.727 43.333 3.266 LGA D 35 D 35 2.208 0 0.283 0.559 4.921 41.364 30.227 4.921 LGA T 36 T 36 2.135 0 0.115 1.014 4.402 51.364 41.039 2.121 LGA K 37 K 37 0.637 0 0.112 1.478 5.384 73.636 51.111 5.384 LGA Y 38 Y 38 0.922 0 0.024 1.352 5.602 81.818 45.303 5.602 LGA T 39 T 39 0.969 0 0.095 0.104 1.793 70.000 65.974 1.330 LGA L 40 L 40 0.885 0 0.128 0.360 1.893 81.818 68.182 1.893 LGA C 41 C 41 1.553 0 0.450 0.670 3.108 58.182 52.468 1.389 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 1.568 1.657 2.449 63.193 53.374 34.235 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 41 1.57 85.366 93.057 2.458 LGA_LOCAL RMSD: 1.568 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.568 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 1.568 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.884793 * X + -0.428599 * Y + 0.182874 * Z + -0.669641 Y_new = -0.044103 * X + -0.313664 * Y + -0.948509 * Z + -2.098702 Z_new = 0.463892 * X + -0.847300 * Y + 0.258626 * Z + 9.306828 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -3.091789 -0.482383 -1.274544 [DEG: -177.1464 -27.6385 -73.0260 ] ZXZ: 0.190465 1.309197 2.640676 [DEG: 10.9128 75.0115 151.2996 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS214_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS214_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 41 1.57 93.057 1.57 REMARK ---------------------------------------------------------- MOLECULE T0955TS214_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 N SER 1 -4.548 -13.454 1.848 1.00 3.61 ATOM 2 CA SER 1 -3.118 -13.611 1.599 1.00 3.61 ATOM 3 C SER 1 -2.247 -12.885 2.607 1.00 3.61 ATOM 4 O SER 1 -2.028 -11.674 2.511 1.00 3.61 ATOM 5 CB SER 1 -2.762 -13.099 0.223 1.00 3.61 ATOM 6 OG SER 1 -1.357 -13.149 0.012 1.00 3.61 ATOM 14 N GLN 2 -1.660 -13.637 3.534 1.00 2.96 ATOM 15 CA GLN 2 -0.813 -13.001 4.535 1.00 2.96 ATOM 16 C GLN 2 0.399 -12.335 3.899 1.00 2.96 ATOM 17 O GLN 2 0.792 -11.243 4.310 1.00 2.96 ATOM 18 CB GLN 2 -0.346 -14.019 5.577 1.00 2.96 ATOM 19 CG GLN 2 -1.446 -14.528 6.495 1.00 2.96 ATOM 20 CD GLN 2 -0.947 -15.582 7.476 1.00 2.96 ATOM 21 OE1 GLN 2 0.046 -16.270 7.220 1.00 2.96 ATOM 22 NE2 GLN 2 -1.636 -15.712 8.605 1.00 2.96 ATOM 31 N GLU 3 0.968 -12.964 2.868 1.00 2.69 ATOM 32 CA GLU 3 2.153 -12.398 2.238 1.00 2.69 ATOM 33 C GLU 3 1.811 -11.096 1.516 1.00 2.69 ATOM 34 O GLU 3 2.601 -10.145 1.533 1.00 2.69 ATOM 35 CB GLU 3 2.791 -13.406 1.287 1.00 2.69 ATOM 36 CG GLU 3 3.378 -14.649 1.994 1.00 2.69 ATOM 37 CD GLU 3 4.466 -14.332 3.017 1.00 2.69 ATOM 38 OE1 GLU 3 5.403 -13.652 2.689 1.00 2.69 ATOM 39 OE2 GLU 3 4.338 -14.782 4.145 1.00 2.69 ATOM 46 N THR 4 0.616 -11.017 0.913 1.00 2.26 ATOM 47 CA THR 4 0.235 -9.779 0.253 1.00 2.26 ATOM 48 C THR 4 0.130 -8.687 1.293 1.00 2.26 ATOM 49 O THR 4 0.621 -7.579 1.094 1.00 2.26 ATOM 50 CB THR 4 -1.095 -9.910 -0.497 1.00 2.26 ATOM 51 OG1 THR 4 -0.961 -10.917 -1.525 1.00 2.26 ATOM 52 CG2 THR 4 -1.499 -8.586 -1.103 1.00 2.26 ATOM 60 N ARG 5 -0.499 -9.006 2.422 1.00 2.18 ATOM 61 CA ARG 5 -0.680 -8.021 3.470 1.00 2.18 ATOM 62 C ARG 5 0.668 -7.555 4.029 1.00 2.18 ATOM 63 O ARG 5 0.844 -6.370 4.337 1.00 2.18 ATOM 64 CB ARG 5 -1.564 -8.595 4.555 1.00 2.18 ATOM 65 CG ARG 5 -3.013 -8.768 4.111 1.00 2.18 ATOM 66 CD ARG 5 -3.849 -9.417 5.145 1.00 2.18 ATOM 67 NE ARG 5 -5.217 -9.615 4.679 1.00 2.18 ATOM 68 CZ ARG 5 -6.190 -10.223 5.383 1.00 2.18 ATOM 69 NH1 ARG 5 -5.945 -10.685 6.592 1.00 2.18 ATOM 70 NH2 ARG 5 -7.396 -10.356 4.857 1.00 2.18 ATOM 84 N LYS 6 1.652 -8.460 4.126 1.00 2.14 ATOM 85 CA LYS 6 2.969 -8.044 4.604 1.00 2.14 ATOM 86 C LYS 6 3.586 -7.055 3.615 1.00 2.14 ATOM 87 O LYS 6 4.115 -6.009 4.010 1.00 2.14 ATOM 88 CB LYS 6 3.901 -9.249 4.740 1.00 2.14 ATOM 89 CG LYS 6 3.588 -10.212 5.875 1.00 2.14 ATOM 90 CD LYS 6 4.535 -11.406 5.813 1.00 2.14 ATOM 91 CE LYS 6 4.220 -12.458 6.856 1.00 2.14 ATOM 92 NZ LYS 6 5.090 -13.665 6.687 1.00 2.14 ATOM 106 N LYS 7 3.465 -7.346 2.316 1.00 2.02 ATOM 107 CA LYS 7 4.004 -6.439 1.310 1.00 2.02 ATOM 108 C LYS 7 3.288 -5.102 1.362 1.00 2.02 ATOM 109 O LYS 7 3.926 -4.045 1.329 1.00 2.02 ATOM 110 CB LYS 7 3.873 -7.038 -0.091 1.00 2.02 ATOM 111 CG LYS 7 4.849 -8.162 -0.406 1.00 2.02 ATOM 112 CD LYS 7 4.521 -8.814 -1.746 1.00 2.02 ATOM 113 CE LYS 7 4.636 -7.817 -2.907 1.00 2.02 ATOM 114 NZ LYS 7 4.425 -8.471 -4.222 1.00 2.02 ATOM 128 N CYS 8 1.966 -5.149 1.525 1.00 1.85 ATOM 129 CA CYS 8 1.175 -3.935 1.579 1.00 1.85 ATOM 130 C CYS 8 1.554 -3.082 2.777 1.00 1.85 ATOM 131 O CYS 8 1.639 -1.856 2.678 1.00 1.85 ATOM 132 CB CYS 8 -0.315 -4.259 1.668 1.00 1.85 ATOM 133 SG CYS 8 -1.053 -4.958 0.155 1.00 1.85 ATOM 138 N THR 9 1.812 -3.740 3.904 1.00 1.93 ATOM 139 CA THR 9 2.181 -3.056 5.121 1.00 1.93 ATOM 140 C THR 9 3.481 -2.295 4.942 1.00 1.93 ATOM 141 O THR 9 3.573 -1.125 5.324 1.00 1.93 ATOM 142 CB THR 9 2.333 -4.050 6.281 1.00 1.93 ATOM 143 OG1 THR 9 1.076 -4.708 6.519 1.00 1.93 ATOM 144 CG2 THR 9 2.785 -3.316 7.519 1.00 1.93 ATOM 152 N GLU 10 4.484 -2.930 4.337 1.00 1.83 ATOM 153 CA GLU 10 5.751 -2.236 4.161 1.00 1.83 ATOM 154 C GLU 10 5.588 -1.053 3.197 1.00 1.83 ATOM 155 O GLU 10 6.185 0.011 3.394 1.00 1.83 ATOM 156 CB GLU 10 6.830 -3.207 3.689 1.00 1.83 ATOM 157 CG GLU 10 7.222 -4.272 4.750 1.00 1.83 ATOM 158 CD GLU 10 7.804 -3.696 6.041 1.00 1.83 ATOM 159 OE1 GLU 10 8.725 -2.922 5.968 1.00 1.83 ATOM 160 OE2 GLU 10 7.311 -4.038 7.107 1.00 1.83 ATOM 167 N MET 11 4.751 -1.215 2.168 1.00 1.85 ATOM 168 CA MET 11 4.506 -0.119 1.239 1.00 1.85 ATOM 169 C MET 11 3.885 1.053 2.003 1.00 1.85 ATOM 170 O MET 11 4.298 2.207 1.841 1.00 1.85 ATOM 171 CB MET 11 3.596 -0.611 0.117 1.00 1.85 ATOM 172 CG MET 11 4.268 -1.625 -0.808 1.00 1.85 ATOM 173 SD MET 11 3.139 -2.338 -1.992 1.00 1.85 ATOM 174 CE MET 11 4.113 -3.595 -2.768 1.00 1.85 ATOM 184 N LYS 12 2.919 0.750 2.874 1.00 1.88 ATOM 185 CA LYS 12 2.264 1.773 3.672 1.00 1.88 ATOM 186 C LYS 12 3.259 2.507 4.556 1.00 1.88 ATOM 187 O LYS 12 3.199 3.730 4.681 1.00 1.88 ATOM 188 CB LYS 12 1.142 1.168 4.517 1.00 1.88 ATOM 189 CG LYS 12 0.336 2.184 5.312 1.00 1.88 ATOM 190 CD LYS 12 -0.842 1.523 6.007 1.00 1.88 ATOM 191 CE LYS 12 -1.651 2.532 6.803 1.00 1.88 ATOM 192 NZ LYS 12 -2.824 1.899 7.471 1.00 1.88 ATOM 206 N LYS 13 4.191 1.763 5.160 1.00 1.91 ATOM 207 CA LYS 13 5.203 2.366 6.018 1.00 1.91 ATOM 208 C LYS 13 6.093 3.346 5.257 1.00 1.91 ATOM 209 O LYS 13 6.521 4.359 5.823 1.00 1.91 ATOM 210 CB LYS 13 6.104 1.301 6.650 1.00 1.91 ATOM 211 CG LYS 13 5.486 0.432 7.733 1.00 1.91 ATOM 212 CD LYS 13 6.519 -0.590 8.186 1.00 1.91 ATOM 213 CE LYS 13 6.021 -1.516 9.270 1.00 1.91 ATOM 214 NZ LYS 13 7.034 -2.570 9.571 1.00 1.91 ATOM 228 N LYS 14 6.396 3.038 3.991 1.00 2.05 ATOM 229 CA LYS 14 7.232 3.910 3.168 1.00 2.05 ATOM 230 C LYS 14 6.505 5.197 2.751 1.00 2.05 ATOM 231 O LYS 14 7.067 6.299 2.809 1.00 2.05 ATOM 232 CB LYS 14 7.705 3.153 1.927 1.00 2.05 ATOM 233 CG LYS 14 8.718 2.046 2.225 1.00 2.05 ATOM 234 CD LYS 14 9.121 1.299 0.964 1.00 2.05 ATOM 235 CE LYS 14 10.110 0.184 1.276 1.00 2.05 ATOM 236 NZ LYS 14 10.493 -0.578 0.055 1.00 2.05 ATOM 250 N PHE 15 5.233 5.078 2.385 1.00 2.25 ATOM 251 CA PHE 15 4.486 6.247 1.926 1.00 2.25 ATOM 252 C PHE 15 3.890 7.091 3.045 1.00 2.25 ATOM 253 O PHE 15 2.689 7.039 3.345 1.00 2.25 ATOM 254 CB PHE 15 3.432 5.854 0.913 1.00 2.25 ATOM 255 CG PHE 15 3.997 5.510 -0.409 1.00 2.25 ATOM 256 CD1 PHE 15 4.243 4.228 -0.761 1.00 2.25 ATOM 257 CD2 PHE 15 4.275 6.524 -1.330 1.00 2.25 ATOM 258 CE1 PHE 15 4.744 3.931 -1.984 1.00 2.25 ATOM 259 CE2 PHE 15 4.772 6.233 -2.574 1.00 2.25 ATOM 260 CZ PHE 15 5.008 4.928 -2.906 1.00 2.25 ATOM 270 N LYS 16 4.774 7.868 3.661 1.00 2.38 ATOM 271 CA LYS 16 4.422 8.668 4.821 1.00 2.38 ATOM 272 C LYS 16 3.356 9.684 4.475 1.00 2.38 ATOM 273 O LYS 16 3.463 10.391 3.477 1.00 2.38 ATOM 274 CB LYS 16 5.639 9.441 5.337 1.00 2.38 ATOM 275 CG LYS 16 6.814 8.597 5.797 1.00 2.38 ATOM 276 CD LYS 16 6.478 7.765 7.004 1.00 2.38 ATOM 277 CE LYS 16 7.730 7.122 7.575 1.00 2.38 ATOM 278 NZ LYS 16 8.366 6.224 6.595 1.00 2.38 ATOM 292 N ASN 17 2.352 9.771 5.340 1.00 2.79 ATOM 293 CA ASN 17 1.233 10.704 5.226 1.00 2.79 ATOM 294 C ASN 17 0.420 10.537 3.939 1.00 2.79 ATOM 295 O ASN 17 -0.234 11.485 3.495 1.00 2.79 ATOM 296 CB ASN 17 1.729 12.135 5.345 1.00 2.79 ATOM 297 CG ASN 17 2.400 12.401 6.667 1.00 2.79 ATOM 298 OD1 ASN 17 1.977 11.889 7.710 1.00 2.79 ATOM 299 ND2 ASN 17 3.447 13.188 6.642 1.00 2.79 ATOM 306 N CYS 18 0.390 9.323 3.390 1.00 2.49 ATOM 307 CA CYS 18 -0.387 9.056 2.185 1.00 2.49 ATOM 308 C CYS 18 -1.584 8.163 2.476 1.00 2.49 ATOM 309 O CYS 18 -1.606 7.436 3.471 1.00 2.49 ATOM 310 CB CYS 18 0.486 8.385 1.136 1.00 2.49 ATOM 311 SG CYS 18 1.914 9.377 0.633 1.00 2.49 ATOM 316 N GLU 19 -2.589 8.218 1.609 1.00 2.50 ATOM 317 CA GLU 19 -3.723 7.309 1.724 1.00 2.50 ATOM 318 C GLU 19 -3.287 6.013 1.075 1.00 2.50 ATOM 319 O GLU 19 -2.838 6.029 -0.068 1.00 2.50 ATOM 320 CB GLU 19 -4.969 7.864 1.023 1.00 2.50 ATOM 321 CG GLU 19 -6.218 6.989 1.162 1.00 2.50 ATOM 322 CD GLU 19 -7.472 7.532 0.449 1.00 2.50 ATOM 323 OE1 GLU 19 -7.460 8.640 -0.074 1.00 2.50 ATOM 324 OE2 GLU 19 -8.447 6.817 0.435 1.00 2.50 ATOM 331 N VAL 20 -3.360 4.904 1.797 1.00 2.26 ATOM 332 CA VAL 20 -2.872 3.647 1.238 1.00 2.26 ATOM 333 C VAL 20 -3.925 2.531 1.299 1.00 2.26 ATOM 334 O VAL 20 -4.478 2.257 2.367 1.00 2.26 ATOM 335 CB VAL 20 -1.590 3.227 1.991 1.00 2.26 ATOM 336 CG1 VAL 20 -1.090 1.956 1.434 1.00 2.26 ATOM 337 CG2 VAL 20 -0.519 4.331 1.861 1.00 2.26 ATOM 347 N ARG 21 -4.182 1.874 0.157 1.00 2.25 ATOM 348 CA ARG 21 -5.171 0.793 0.093 1.00 2.25 ATOM 349 C ARG 21 -4.603 -0.507 -0.487 1.00 2.25 ATOM 350 O ARG 21 -4.066 -0.528 -1.595 1.00 2.25 ATOM 351 CB ARG 21 -6.346 1.218 -0.781 1.00 2.25 ATOM 352 CG ARG 21 -7.488 0.205 -0.899 1.00 2.25 ATOM 353 CD ARG 21 -8.645 0.749 -1.701 1.00 2.25 ATOM 354 NE ARG 21 -8.338 0.854 -3.144 1.00 2.25 ATOM 355 CZ ARG 21 -8.565 -0.131 -4.039 1.00 2.25 ATOM 356 NH1 ARG 21 -9.102 -1.270 -3.667 1.00 2.25 ATOM 357 NH2 ARG 21 -8.243 0.070 -5.293 1.00 2.25 ATOM 371 N CYS 22 -4.752 -1.603 0.258 1.00 2.33 ATOM 372 CA CYS 22 -4.258 -2.924 -0.159 1.00 2.33 ATOM 373 C CYS 22 -5.372 -3.740 -0.801 1.00 2.33 ATOM 374 O CYS 22 -6.430 -3.912 -0.192 1.00 2.33 ATOM 375 CB CYS 22 -3.717 -3.687 1.046 1.00 2.33 ATOM 376 SG CYS 22 -2.989 -5.345 0.684 1.00 2.33 ATOM 381 N ASP 23 -5.161 -4.225 -2.028 1.00 2.50 ATOM 382 CA ASP 23 -6.217 -4.972 -2.710 1.00 2.50 ATOM 383 C ASP 23 -5.730 -6.275 -3.353 1.00 2.50 ATOM 384 O ASP 23 -5.058 -6.285 -4.405 1.00 2.50 ATOM 385 CB ASP 23 -6.903 -4.071 -3.738 1.00 2.50 ATOM 386 CG ASP 23 -8.173 -4.685 -4.447 1.00 2.50 ATOM 387 OD1 ASP 23 -8.370 -5.901 -4.426 1.00 2.50 ATOM 388 OD2 ASP 23 -8.956 -3.901 -4.969 1.00 2.50 ATOM 393 N GLU 24 -6.166 -7.383 -2.741 1.00 2.77 ATOM 394 CA GLU 24 -5.813 -8.754 -3.115 1.00 2.77 ATOM 395 C GLU 24 -6.305 -9.137 -4.509 1.00 2.77 ATOM 396 O GLU 24 -5.866 -10.137 -5.065 1.00 2.77 ATOM 397 CB GLU 24 -6.319 -9.767 -2.088 1.00 2.77 ATOM 398 CG GLU 24 -5.608 -9.694 -0.744 1.00 2.77 ATOM 399 CD GLU 24 -6.018 -10.788 0.209 1.00 2.77 ATOM 400 OE1 GLU 24 -6.887 -11.559 -0.119 1.00 2.77 ATOM 401 OE2 GLU 24 -5.423 -10.878 1.267 1.00 2.77 ATOM 408 N SER 25 -7.226 -8.355 -5.086 1.00 2.57 ATOM 409 CA SER 25 -7.708 -8.640 -6.432 1.00 2.57 ATOM 410 C SER 25 -6.519 -8.648 -7.393 1.00 2.57 ATOM 411 O SER 25 -6.511 -9.378 -8.384 1.00 2.57 ATOM 412 CB SER 25 -8.678 -7.572 -6.897 1.00 2.57 ATOM 413 OG SER 25 -9.814 -7.532 -6.090 1.00 2.57 ATOM 419 N ASN 26 -5.532 -7.780 -7.115 1.00 2.52 ATOM 420 CA ASN 26 -4.329 -7.670 -7.926 1.00 2.52 ATOM 421 C ASN 26 -3.087 -7.957 -7.086 1.00 2.52 ATOM 422 O ASN 26 -2.005 -8.185 -7.625 1.00 2.52 ATOM 423 CB ASN 26 -4.222 -6.294 -8.560 1.00 2.52 ATOM 424 CG ASN 26 -5.319 -6.013 -9.552 1.00 2.52 ATOM 425 OD1 ASN 26 -5.294 -6.517 -10.679 1.00 2.52 ATOM 426 ND2 ASN 26 -6.277 -5.212 -9.160 1.00 2.52 ATOM 433 N HIS 27 -3.266 -7.963 -5.757 1.00 2.63 ATOM 434 CA HIS 27 -2.187 -8.113 -4.778 1.00 2.63 ATOM 435 C HIS 27 -1.239 -6.935 -4.885 1.00 2.63 ATOM 436 O HIS 27 -0.015 -7.081 -4.823 1.00 2.63 ATOM 437 CB HIS 27 -1.446 -9.448 -4.950 1.00 2.63 ATOM 438 CG HIS 27 -2.338 -10.647 -4.788 1.00 2.63 ATOM 439 ND1 HIS 27 -2.816 -11.063 -3.557 1.00 2.63 ATOM 440 CD2 HIS 27 -2.858 -11.498 -5.699 1.00 2.63 ATOM 441 CE1 HIS 27 -3.595 -12.119 -3.725 1.00 2.63 ATOM 442 NE2 HIS 27 -3.633 -12.406 -5.014 1.00 2.63 ATOM 450 N CYS 28 -1.853 -5.765 -5.029 1.00 2.25 ATOM 451 CA CYS 28 -1.166 -4.488 -5.183 1.00 2.25 ATOM 452 C CYS 28 -1.691 -3.439 -4.215 1.00 2.25 ATOM 453 O CYS 28 -2.728 -3.622 -3.573 1.00 2.25 ATOM 454 CB CYS 28 -1.327 -3.964 -6.612 1.00 2.25 ATOM 455 SG CYS 28 -0.689 -5.072 -7.894 1.00 2.25 ATOM 460 N VAL 29 -0.959 -2.337 -4.126 1.00 2.10 ATOM 461 CA VAL 29 -1.337 -1.205 -3.303 1.00 2.10 ATOM 462 C VAL 29 -1.547 0.082 -4.078 1.00 2.10 ATOM 463 O VAL 29 -0.719 0.475 -4.908 1.00 2.10 ATOM 464 CB VAL 29 -0.274 -0.932 -2.241 1.00 2.10 ATOM 465 CG1 VAL 29 -0.608 0.261 -1.470 1.00 2.10 ATOM 466 CG2 VAL 29 -0.211 -2.038 -1.322 1.00 2.10 ATOM 476 N GLU 30 -2.675 0.730 -3.796 1.00 2.25 ATOM 477 CA GLU 30 -2.993 2.033 -4.358 1.00 2.25 ATOM 478 C GLU 30 -2.574 3.085 -3.344 1.00 2.25 ATOM 479 O GLU 30 -2.988 3.028 -2.182 1.00 2.25 ATOM 480 CB GLU 30 -4.496 2.176 -4.655 1.00 2.25 ATOM 481 CG GLU 30 -4.897 3.538 -5.277 1.00 2.25 ATOM 482 CD GLU 30 -6.406 3.707 -5.541 1.00 2.25 ATOM 483 OE1 GLU 30 -7.177 2.823 -5.209 1.00 2.25 ATOM 484 OE2 GLU 30 -6.783 4.739 -6.083 1.00 2.25 ATOM 491 N VAL 31 -1.739 4.030 -3.758 1.00 2.26 ATOM 492 CA VAL 31 -1.289 5.066 -2.840 1.00 2.26 ATOM 493 C VAL 31 -1.600 6.465 -3.342 1.00 2.26 ATOM 494 O VAL 31 -1.290 6.786 -4.489 1.00 2.26 ATOM 495 CB VAL 31 0.225 5.000 -2.643 1.00 2.26 ATOM 496 CG1 VAL 31 0.636 6.085 -1.721 1.00 2.26 ATOM 497 CG2 VAL 31 0.640 3.652 -2.157 1.00 2.26 ATOM 507 N ARG 32 -2.179 7.312 -2.487 1.00 2.33 ATOM 508 CA ARG 32 -2.417 8.700 -2.876 1.00 2.33 ATOM 509 C ARG 32 -1.685 9.663 -1.948 1.00 2.33 ATOM 510 O ARG 32 -1.891 9.666 -0.728 1.00 2.33 ATOM 511 CB ARG 32 -3.889 9.061 -2.849 1.00 2.33 ATOM 512 CG ARG 32 -4.185 10.497 -3.276 1.00 2.33 ATOM 513 CD ARG 32 -5.645 10.770 -3.313 1.00 2.33 ATOM 514 NE ARG 32 -6.245 10.737 -1.971 1.00 2.33 ATOM 515 CZ ARG 32 -6.339 11.796 -1.149 1.00 2.33 ATOM 516 NH1 ARG 32 -5.886 12.984 -1.507 1.00 2.33 ATOM 517 NH2 ARG 32 -6.900 11.613 0.025 1.00 2.33 ATOM 531 N CYS 33 -0.833 10.488 -2.529 1.00 2.67 ATOM 532 CA CYS 33 -0.038 11.440 -1.764 1.00 2.67 ATOM 533 C CYS 33 -0.258 12.777 -2.426 1.00 2.67 ATOM 534 O CYS 33 -0.119 12.862 -3.648 1.00 2.67 ATOM 535 CB CYS 33 1.447 11.097 -1.855 1.00 2.67 ATOM 536 SG CYS 33 1.871 9.393 -1.394 1.00 2.67 ATOM 541 N SER 34 -0.556 13.830 -1.668 1.00 3.63 ATOM 542 CA SER 34 -0.836 15.104 -2.332 1.00 3.63 ATOM 543 C SER 34 -1.877 14.862 -3.418 1.00 3.63 ATOM 544 O SER 34 -2.869 14.162 -3.198 1.00 3.63 ATOM 545 CB SER 34 0.434 15.705 -2.945 1.00 3.63 ATOM 546 OG SER 34 0.197 16.999 -3.461 1.00 3.63 ATOM 552 N ASP 35 -1.615 15.419 -4.586 1.00 4.31 ATOM 553 CA ASP 35 -2.450 15.260 -5.769 1.00 4.31 ATOM 554 C ASP 35 -1.904 14.226 -6.772 1.00 4.31 ATOM 555 O ASP 35 -2.194 14.305 -7.968 1.00 4.31 ATOM 556 CB ASP 35 -2.669 16.622 -6.442 1.00 4.31 ATOM 557 CG ASP 35 -1.365 17.349 -6.836 1.00 4.31 ATOM 558 OD1 ASP 35 -0.331 17.068 -6.242 1.00 4.31 ATOM 559 OD2 ASP 35 -1.417 18.185 -7.714 1.00 4.31 ATOM 564 N THR 36 -1.119 13.254 -6.282 1.00 4.36 ATOM 565 CA THR 36 -0.522 12.221 -7.126 1.00 4.36 ATOM 566 C THR 36 -0.847 10.790 -6.672 1.00 4.36 ATOM 567 O THR 36 -1.066 10.529 -5.485 1.00 4.36 ATOM 568 CB THR 36 1.011 12.387 -7.106 1.00 4.36 ATOM 569 OG1 THR 36 1.500 12.181 -5.755 1.00 4.36 ATOM 570 CG2 THR 36 1.391 13.789 -7.551 1.00 4.36 ATOM 578 N LYS 37 -0.813 9.836 -7.610 1.00 4.32 ATOM 579 CA LYS 37 -1.015 8.440 -7.225 1.00 4.32 ATOM 580 C LYS 37 0.089 7.505 -7.680 1.00 4.32 ATOM 581 O LYS 37 0.728 7.722 -8.713 1.00 4.32 ATOM 582 CB LYS 37 -2.349 7.877 -7.714 1.00 4.32 ATOM 583 CG LYS 37 -3.591 8.493 -7.096 1.00 4.32 ATOM 584 CD LYS 37 -4.819 7.688 -7.499 1.00 4.32 ATOM 585 CE LYS 37 -6.091 8.224 -6.879 1.00 4.32 ATOM 586 NZ LYS 37 -7.254 7.351 -7.199 1.00 4.32 ATOM 600 N TYR 38 0.276 6.439 -6.894 1.00 4.05 ATOM 601 CA TYR 38 1.271 5.413 -7.178 1.00 4.05 ATOM 602 C TYR 38 0.620 4.035 -7.099 1.00 4.05 ATOM 603 O TYR 38 -0.297 3.819 -6.296 1.00 4.05 ATOM 604 CB TYR 38 2.377 5.499 -6.120 1.00 4.05 ATOM 605 CG TYR 38 2.869 6.892 -5.986 1.00 4.05 ATOM 606 CD1 TYR 38 2.156 7.748 -5.152 1.00 4.05 ATOM 607 CD2 TYR 38 3.964 7.349 -6.682 1.00 4.05 ATOM 608 CE1 TYR 38 2.516 9.048 -5.040 1.00 4.05 ATOM 609 CE2 TYR 38 4.340 8.673 -6.555 1.00 4.05 ATOM 610 CZ TYR 38 3.608 9.523 -5.744 1.00 4.05 ATOM 611 OH TYR 38 3.953 10.851 -5.641 1.00 4.05 ATOM 621 N THR 39 1.105 3.091 -7.899 1.00 3.74 ATOM 622 CA THR 39 0.649 1.711 -7.762 1.00 3.74 ATOM 623 C THR 39 1.844 0.812 -7.553 1.00 3.74 ATOM 624 O THR 39 2.798 0.843 -8.335 1.00 3.74 ATOM 625 CB THR 39 -0.158 1.212 -8.972 1.00 3.74 ATOM 626 OG1 THR 39 -1.317 2.039 -9.148 1.00 3.74 ATOM 627 CG2 THR 39 -0.603 -0.256 -8.725 1.00 3.74 ATOM 635 N LEU 40 1.801 0.020 -6.492 1.00 4.64 ATOM 636 CA LEU 40 2.911 -0.868 -6.209 1.00 4.64 ATOM 637 C LEU 40 2.455 -2.307 -6.121 1.00 4.64 ATOM 638 O LEU 40 1.408 -2.592 -5.545 1.00 4.64 ATOM 639 CB LEU 40 3.549 -0.448 -4.899 1.00 4.64 ATOM 640 CG LEU 40 4.123 0.930 -4.884 1.00 4.64 ATOM 641 CD1 LEU 40 3.033 1.925 -4.372 1.00 4.64 ATOM 642 CD2 LEU 40 5.356 0.925 -4.022 1.00 4.64 ATOM 654 N CYS 41 3.245 -3.221 -6.660 1.00 5.63 ATOM 655 CA CYS 41 2.880 -4.629 -6.607 1.00 5.63 ATOM 656 C CYS 41 4.029 -5.482 -6.084 1.00 5.63 ATOM 657 O CYS 41 3.992 -6.711 -6.168 1.00 5.63 ATOM 658 OXT CYS 41 5.048 -4.932 -5.670 1.00 5.63 ATOM 659 CB CYS 41 2.420 -5.094 -7.988 1.00 5.63 ATOM 660 SG CYS 41 0.984 -4.141 -8.639 1.00 5.63 TER END