####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS192_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS192_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.46 1.46 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.46 1.46 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 2 - 21 0.91 1.87 LCS_AVERAGE: 40.21 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 15 41 41 3 5 7 13 36 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 20 41 41 4 20 25 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 20 41 41 12 20 26 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 20 41 41 12 20 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 20 41 41 12 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 20 41 41 12 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 20 41 41 12 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 20 41 41 12 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 20 41 41 12 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 20 41 41 12 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 20 41 41 12 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 20 41 41 12 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 20 41 41 12 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 20 41 41 12 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 20 41 41 6 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 20 41 41 3 13 26 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 20 41 41 11 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 20 41 41 11 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 20 41 41 7 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 20 41 41 4 18 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 20 41 41 4 18 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 8 41 41 3 9 30 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 8 41 41 7 18 30 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 8 41 41 10 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 6 41 41 4 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 6 41 41 3 4 23 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 15 41 41 3 7 19 26 35 37 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 15 41 41 11 22 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 15 41 41 11 22 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 15 41 41 11 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 15 41 41 11 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 15 41 41 11 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 15 41 41 11 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 15 41 41 5 18 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 15 41 41 11 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 15 41 41 11 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 15 41 41 11 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 15 41 41 4 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 15 41 41 4 22 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 15 41 41 3 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 15 41 41 9 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 80.07 ( 40.21 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 23 32 36 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 29.27 56.10 78.05 87.80 95.12 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.29 0.63 0.88 1.11 1.24 1.31 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 GDT RMS_ALL_AT 2.64 1.51 1.49 1.52 1.48 1.47 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 # Checking swapping # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 2.832 0 0.646 0.702 5.565 20.909 14.848 5.565 LGA Q 2 Q 2 2.600 0 0.182 1.000 3.185 35.455 33.737 1.832 LGA E 3 E 3 2.122 0 0.076 1.532 7.328 44.545 23.030 5.111 LGA T 4 T 4 1.717 0 0.047 1.252 4.005 58.182 45.195 4.005 LGA R 5 R 5 1.004 0 0.032 0.813 2.879 73.636 56.529 2.618 LGA K 6 K 6 1.079 0 0.049 0.885 2.709 73.636 62.424 0.482 LGA K 7 K 7 1.141 0 0.088 0.667 3.810 65.455 46.869 3.810 LGA C 8 C 8 0.816 0 0.045 0.784 3.534 86.364 73.030 3.534 LGA T 9 T 9 0.285 0 0.019 0.052 0.567 100.000 97.403 0.441 LGA E 10 E 10 0.703 0 0.026 0.694 2.477 81.818 65.253 2.477 LGA M 11 M 11 0.591 0 0.142 1.008 3.555 81.818 66.136 3.555 LGA K 12 K 12 0.582 0 0.076 1.180 6.735 86.364 54.949 6.735 LGA K 13 K 13 0.735 0 0.060 0.154 2.751 90.909 63.636 2.751 LGA K 14 K 14 0.580 0 0.055 0.546 1.956 86.364 76.768 1.229 LGA F 15 F 15 1.038 0 0.448 0.645 3.896 49.091 57.686 2.251 LGA K 16 K 16 1.955 0 0.261 1.432 6.853 61.818 34.747 6.853 LGA N 17 N 17 0.469 0 0.178 0.985 2.883 71.364 60.909 2.532 LGA C 18 C 18 0.827 0 0.057 0.115 1.101 81.818 79.091 1.101 LGA E 19 E 19 0.846 0 0.272 0.633 2.115 77.727 73.333 2.115 LGA V 20 V 20 1.383 0 0.096 0.102 1.882 58.182 55.065 1.667 LGA R 21 R 21 1.661 0 0.053 1.368 6.933 54.545 35.372 3.227 LGA C 22 C 22 2.380 0 0.117 0.176 3.750 41.364 33.939 3.750 LGA D 23 D 23 2.199 0 0.438 1.099 4.742 26.364 22.727 3.328 LGA E 24 E 24 0.495 0 0.154 0.943 7.204 90.909 49.495 7.204 LGA S 25 S 25 0.949 0 0.168 0.691 2.503 66.364 62.424 2.503 LGA N 26 N 26 2.563 0 0.039 1.085 9.334 53.182 26.818 8.238 LGA H 27 H 27 4.266 0 0.501 1.020 11.935 16.818 6.727 11.597 LGA C 28 C 28 1.266 0 0.205 0.329 2.523 60.000 64.545 0.994 LGA V 29 V 29 1.238 0 0.080 0.212 2.037 55.000 59.481 1.355 LGA E 30 E 30 0.949 0 0.046 0.629 2.373 77.727 63.434 1.850 LGA V 31 V 31 0.409 0 0.085 0.142 0.789 95.455 89.610 0.605 LGA R 32 R 32 0.151 0 0.163 1.280 3.527 91.364 66.446 0.975 LGA C 33 C 33 0.267 0 0.530 0.819 3.649 69.091 63.333 2.038 LGA S 34 S 34 1.367 0 0.373 0.584 2.654 61.818 54.242 2.654 LGA D 35 D 35 0.763 0 0.052 0.188 1.152 77.727 79.773 0.901 LGA T 36 T 36 0.495 0 0.109 0.278 0.656 95.455 92.208 0.656 LGA K 37 K 37 0.400 0 0.175 0.711 1.883 95.455 81.010 1.833 LGA Y 38 Y 38 1.188 0 0.033 1.331 4.154 69.545 51.212 4.154 LGA T 39 T 39 1.285 0 0.142 0.156 2.346 61.818 55.325 1.680 LGA L 40 L 40 1.050 0 0.021 0.866 2.834 69.545 57.500 1.409 LGA C 41 C 41 0.676 1 0.390 0.451 1.777 70.000 63.377 0.888 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 1.464 1.528 2.632 67.927 56.577 38.714 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 41 1.46 85.976 93.571 2.621 LGA_LOCAL RMSD: 1.464 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.464 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 1.464 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.432986 * X + -0.839462 * Y + -0.328370 * Z + 74.265038 Y_new = 0.825848 * X + -0.515428 * Y + 0.228712 * Z + -24.821310 Z_new = -0.361246 * X + -0.172155 * Y + 0.916441 * Z + -18.304306 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.053688 0.369604 -0.185688 [DEG: 117.6677 21.1768 -10.6391 ] ZXZ: -2.179173 0.411703 -2.015516 [DEG: -124.8574 23.5888 -115.4805 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS192_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS192_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 41 1.46 93.571 1.46 REMARK ---------------------------------------------------------- MOLECULE T0955TS192_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 N SER 1 -1.446 -14.718 0.921 1.00 3.87 ATOM 2 CA SER 1 -1.709 -13.271 0.851 1.00 3.87 ATOM 4 CB SER 1 -3.220 -13.025 0.823 1.00 3.87 ATOM 7 OG SER 1 -3.842 -13.749 1.882 1.00 3.87 ATOM 9 C SER 1 -1.064 -12.480 2.003 1.00 3.87 ATOM 10 O SER 1 -1.023 -11.247 2.031 1.00 3.87 ATOM 11 N GLN 2 -0.512 -13.186 2.990 1.00 2.96 ATOM 13 CA GLN 2 0.162 -12.502 4.089 1.00 2.96 ATOM 15 CB GLN 2 0.465 -13.476 5.241 1.00 2.96 ATOM 18 CG GLN 2 0.858 -12.737 6.532 1.00 2.96 ATOM 21 CD GLN 2 -0.169 -11.685 6.962 1.00 2.96 ATOM 22 OE1 GLN 2 -1.372 -11.857 6.823 1.00 2.96 ATOM 23 NE2 GLN 2 0.257 -10.548 7.470 1.00 2.96 ATOM 26 C GLN 2 1.404 -11.715 3.625 1.00 2.96 ATOM 27 O GLN 2 1.750 -10.702 4.235 1.00 2.96 ATOM 28 N GLU 3 2.048 -12.128 2.526 1.00 2.65 ATOM 30 CA GLU 3 3.174 -11.388 1.945 1.00 2.65 ATOM 32 CB GLU 3 3.988 -12.297 1.008 1.00 2.65 ATOM 35 CG GLU 3 5.472 -11.890 0.915 1.00 2.65 ATOM 38 CD GLU 3 5.736 -10.649 0.056 1.00 2.65 ATOM 39 OE1 GLU 3 6.614 -9.813 0.407 1.00 2.65 ATOM 40 OE2 GLU 3 5.128 -10.525 -1.030 1.00 2.65 ATOM 41 C GLU 3 2.755 -10.064 1.293 1.00 2.65 ATOM 42 O GLU 3 3.413 -9.050 1.523 1.00 2.65 ATOM 43 N THR 4 1.619 -10.037 0.587 1.00 2.27 ATOM 45 CA THR 4 1.019 -8.801 0.054 1.00 2.27 ATOM 47 CB THR 4 -0.120 -9.097 -0.937 1.00 2.27 ATOM 49 CG2 THR 4 0.449 -9.371 -2.329 1.00 2.27 ATOM 53 OG1 THR 4 -0.834 -10.255 -0.588 1.00 2.27 ATOM 55 C THR 4 0.580 -7.856 1.175 1.00 2.27 ATOM 56 O THR 4 0.993 -6.691 1.152 1.00 2.27 ATOM 57 N ARG 5 -0.111 -8.324 2.230 1.00 1.69 ATOM 59 CA ARG 5 -0.424 -7.447 3.390 1.00 1.69 ATOM 61 CB ARG 5 -1.283 -8.178 4.432 1.00 1.69 ATOM 64 CG ARG 5 -2.687 -8.396 3.885 1.00 1.69 ATOM 67 CD ARG 5 -3.645 -8.995 4.919 1.00 1.69 ATOM 70 NE ARG 5 -3.317 -10.404 5.191 1.00 1.69 ATOM 72 CZ ARG 5 -3.646 -11.420 4.420 1.00 1.69 ATOM 73 NH1 ARG 5 -3.262 -12.616 4.743 1.00 1.69 ATOM 76 NH2 ARG 5 -4.336 -11.306 3.328 1.00 1.69 ATOM 79 C ARG 5 0.810 -6.875 4.092 1.00 1.69 ATOM 80 O ARG 5 0.832 -5.700 4.483 1.00 1.69 ATOM 81 N LYS 6 1.853 -7.692 4.246 1.00 1.56 ATOM 83 CA LYS 6 3.142 -7.265 4.801 1.00 1.56 ATOM 85 CB LYS 6 3.986 -8.536 5.024 1.00 1.56 ATOM 88 CG LYS 6 5.393 -8.358 5.615 1.00 1.56 ATOM 91 CD LYS 6 6.467 -7.864 4.637 1.00 1.56 ATOM 94 CE LYS 6 6.495 -8.682 3.342 1.00 1.56 ATOM 97 NZ LYS 6 7.561 -8.222 2.432 1.00 1.56 ATOM 101 C LYS 6 3.774 -6.162 3.944 1.00 1.56 ATOM 102 O LYS 6 4.086 -5.108 4.499 1.00 1.56 ATOM 103 N LYS 7 3.865 -6.330 2.614 1.00 1.56 ATOM 105 CA LYS 7 4.313 -5.275 1.679 1.00 1.56 ATOM 107 CB LYS 7 4.176 -5.732 0.215 1.00 1.56 ATOM 110 CG LYS 7 5.360 -6.545 -0.323 1.00 1.56 ATOM 113 CD LYS 7 5.130 -6.842 -1.816 1.00 1.56 ATOM 116 CE LYS 7 6.377 -7.373 -2.536 1.00 1.56 ATOM 119 NZ LYS 7 6.712 -8.747 -2.111 1.00 1.56 ATOM 123 C LYS 7 3.519 -3.974 1.854 1.00 1.56 ATOM 124 O LYS 7 4.117 -2.911 1.994 1.00 1.56 ATOM 125 N CYS 8 2.185 -4.049 1.888 1.00 1.20 ATOM 127 CA CYS 8 1.309 -2.888 2.105 1.00 1.20 ATOM 129 CB CYS 8 -0.142 -3.373 2.175 1.00 1.20 ATOM 132 SG CYS 8 -0.765 -4.045 0.629 1.00 1.20 ATOM 133 C CYS 8 1.631 -2.135 3.400 1.00 1.20 ATOM 134 O CYS 8 1.679 -0.900 3.425 1.00 1.20 ATOM 135 N THR 9 1.885 -2.870 4.480 1.00 1.09 ATOM 137 CA THR 9 2.238 -2.289 5.781 1.00 1.09 ATOM 139 CB THR 9 2.224 -3.389 6.857 1.00 1.09 ATOM 141 CG2 THR 9 2.467 -2.848 8.264 1.00 1.09 ATOM 145 OG1 THR 9 0.970 -4.027 6.898 1.00 1.09 ATOM 147 C THR 9 3.614 -1.597 5.769 1.00 1.09 ATOM 148 O THR 9 3.771 -0.498 6.311 1.00 1.09 ATOM 149 N GLU 10 4.610 -2.215 5.112 1.00 1.28 ATOM 151 CA GLU 10 5.918 -1.587 4.869 1.00 1.28 ATOM 153 CB GLU 10 6.823 -2.440 3.965 1.00 1.28 ATOM 156 CG GLU 10 7.325 -3.803 4.438 1.00 1.28 ATOM 159 CD GLU 10 8.134 -4.428 3.284 1.00 1.28 ATOM 160 OE1 GLU 10 7.814 -5.559 2.842 1.00 1.28 ATOM 161 OE2 GLU 10 9.040 -3.708 2.796 1.00 1.28 ATOM 162 C GLU 10 5.771 -0.258 4.131 1.00 1.28 ATOM 163 O GLU 10 6.366 0.737 4.540 1.00 1.28 ATOM 164 N MET 11 4.996 -0.257 3.039 1.00 1.35 ATOM 166 CA MET 11 4.754 0.919 2.213 1.00 1.35 ATOM 168 CB MET 11 3.834 0.576 1.028 1.00 1.35 ATOM 171 CG MET 11 4.508 -0.298 -0.029 1.00 1.35 ATOM 174 SD MET 11 3.345 -0.931 -1.267 1.00 1.35 ATOM 175 CE MET 11 4.441 -2.053 -2.166 1.00 1.35 ATOM 179 C MET 11 4.117 2.021 3.056 1.00 1.35 ATOM 180 O MET 11 4.654 3.120 3.102 1.00 1.35 ATOM 181 N LYS 12 3.040 1.722 3.801 1.00 1.34 ATOM 183 CA LYS 12 2.393 2.714 4.670 1.00 1.34 ATOM 185 CB LYS 12 1.170 2.110 5.393 1.00 1.34 ATOM 188 CG LYS 12 0.441 3.093 6.335 1.00 1.34 ATOM 191 CD LYS 12 0.045 4.438 5.697 1.00 1.34 ATOM 194 CE LYS 12 -0.686 5.334 6.708 1.00 1.34 ATOM 197 NZ LYS 12 -0.707 6.749 6.266 1.00 1.34 ATOM 201 C LYS 12 3.373 3.346 5.655 1.00 1.34 ATOM 202 O LYS 12 3.388 4.571 5.792 1.00 1.34 ATOM 203 N LYS 13 4.231 2.540 6.292 1.00 1.62 ATOM 205 CA LYS 13 5.280 3.078 7.173 1.00 1.62 ATOM 207 CB LYS 13 6.043 1.926 7.848 1.00 1.62 ATOM 210 CG LYS 13 5.180 1.194 8.893 1.00 1.62 ATOM 213 CD LYS 13 5.852 -0.109 9.339 1.00 1.62 ATOM 216 CE LYS 13 4.961 -0.917 10.290 1.00 1.62 ATOM 219 NZ LYS 13 4.845 -0.292 11.631 1.00 1.62 ATOM 223 C LYS 13 6.237 4.026 6.431 1.00 1.62 ATOM 224 O LYS 13 6.378 5.174 6.837 1.00 1.62 ATOM 225 N LYS 14 6.835 3.583 5.319 1.00 1.94 ATOM 227 CA LYS 14 7.831 4.323 4.513 1.00 1.94 ATOM 229 CB LYS 14 8.315 3.383 3.380 1.00 1.94 ATOM 232 CG LYS 14 9.157 2.192 3.896 1.00 1.94 ATOM 235 CD LYS 14 9.266 1.030 2.885 1.00 1.94 ATOM 238 CE LYS 14 10.129 -0.104 3.476 1.00 1.94 ATOM 241 NZ LYS 14 10.219 -1.304 2.599 1.00 1.94 ATOM 245 C LYS 14 7.318 5.654 3.964 1.00 1.94 ATOM 246 O LYS 14 7.993 6.677 4.037 1.00 1.94 ATOM 247 N PHE 15 6.081 5.651 3.481 1.00 2.10 ATOM 249 CA PHE 15 5.348 6.825 3.037 1.00 2.10 ATOM 251 CB PHE 15 4.121 6.334 2.269 1.00 2.10 ATOM 254 CG PHE 15 4.445 5.932 0.832 1.00 2.10 ATOM 255 CD1 PHE 15 4.149 4.637 0.367 1.00 2.10 ATOM 257 CE1 PHE 15 4.503 4.246 -0.938 1.00 2.10 ATOM 259 CZ PHE 15 5.130 5.162 -1.800 1.00 2.10 ATOM 261 CE2 PHE 15 5.419 6.460 -1.347 1.00 2.10 ATOM 263 CD2 PHE 15 5.077 6.844 -0.040 1.00 2.10 ATOM 265 C PHE 15 5.001 7.772 4.191 1.00 2.10 ATOM 266 O PHE 15 5.065 8.987 3.990 1.00 2.10 ATOM 267 N LYS 16 4.700 7.253 5.395 1.00 2.48 ATOM 269 CA LYS 16 4.132 7.961 6.568 1.00 2.48 ATOM 271 CB LYS 16 5.104 9.021 7.130 1.00 2.48 ATOM 274 CG LYS 16 6.555 8.545 7.341 1.00 2.48 ATOM 277 CD LYS 16 7.557 9.712 7.346 1.00 2.48 ATOM 280 CE LYS 16 8.086 10.088 5.950 1.00 2.48 ATOM 283 NZ LYS 16 7.057 10.658 5.039 1.00 2.48 ATOM 287 C LYS 16 2.756 8.553 6.250 1.00 2.48 ATOM 288 O LYS 16 1.729 8.089 6.739 1.00 2.48 ATOM 289 N ASN 17 2.758 9.539 5.359 1.00 2.20 ATOM 291 CA ASN 17 1.641 10.339 4.892 1.00 2.20 ATOM 293 CB ASN 17 2.183 11.355 3.848 1.00 2.20 ATOM 296 CG ASN 17 3.277 12.311 4.315 1.00 2.20 ATOM 297 OD1 ASN 17 4.280 11.939 4.918 1.00 2.20 ATOM 298 ND2 ASN 17 3.153 13.576 3.985 1.00 2.20 ATOM 301 C ASN 17 0.518 9.486 4.273 1.00 2.20 ATOM 302 O ASN 17 -0.600 9.462 4.781 1.00 2.20 ATOM 303 N CYS 18 0.835 8.791 3.183 1.00 1.74 ATOM 305 CA CYS 18 -0.118 8.380 2.152 1.00 1.74 ATOM 307 CB CYS 18 0.687 7.734 1.016 1.00 1.74 ATOM 310 SG CYS 18 2.234 8.568 0.543 1.00 1.74 ATOM 311 C CYS 18 -1.235 7.419 2.595 1.00 1.74 ATOM 312 O CYS 18 -1.067 6.626 3.528 1.00 1.74 ATOM 313 N GLU 19 -2.348 7.441 1.859 1.00 1.39 ATOM 315 CA GLU 19 -3.333 6.345 1.818 1.00 1.39 ATOM 317 CB GLU 19 -4.565 6.854 1.030 1.00 1.39 ATOM 320 CG GLU 19 -5.699 5.827 0.862 1.00 1.39 ATOM 323 CD GLU 19 -6.798 6.271 -0.116 1.00 1.39 ATOM 324 OE1 GLU 19 -7.985 6.287 0.280 1.00 1.39 ATOM 325 OE2 GLU 19 -6.532 6.404 -1.329 1.00 1.39 ATOM 326 C GLU 19 -2.724 5.139 1.103 1.00 1.39 ATOM 327 O GLU 19 -1.959 5.290 0.157 1.00 1.39 ATOM 328 N VAL 20 -3.141 3.946 1.521 1.00 1.21 ATOM 330 CA VAL 20 -2.770 2.662 0.919 1.00 1.21 ATOM 332 CB VAL 20 -1.719 1.961 1.800 1.00 1.21 ATOM 334 CG1 VAL 20 -1.312 0.599 1.230 1.00 1.21 ATOM 338 CG2 VAL 20 -0.446 2.808 1.962 1.00 1.21 ATOM 342 C VAL 20 -4.040 1.829 0.844 1.00 1.21 ATOM 343 O VAL 20 -4.769 1.710 1.831 1.00 1.21 ATOM 344 N ARG 21 -4.305 1.274 -0.331 1.00 1.26 ATOM 346 CA ARG 21 -5.451 0.427 -0.640 1.00 1.26 ATOM 348 CB ARG 21 -6.440 1.157 -1.564 1.00 1.26 ATOM 351 CG ARG 21 -7.159 2.313 -0.870 1.00 1.26 ATOM 354 CD ARG 21 -8.203 2.921 -1.809 1.00 1.26 ATOM 357 NE ARG 21 -8.909 4.018 -1.132 1.00 1.26 ATOM 359 CZ ARG 21 -10.060 3.991 -0.495 1.00 1.26 ATOM 360 NH1 ARG 21 -10.356 5.010 0.247 1.00 1.26 ATOM 363 NH2 ARG 21 -10.900 2.994 -0.564 1.00 1.26 ATOM 366 C ARG 21 -4.947 -0.822 -1.331 1.00 1.26 ATOM 367 O ARG 21 -4.388 -0.702 -2.410 1.00 1.26 ATOM 368 N CYS 22 -5.126 -1.991 -0.727 1.00 1.61 ATOM 370 CA CYS 22 -4.579 -3.248 -1.233 1.00 1.61 ATOM 372 CB CYS 22 -3.675 -3.874 -0.171 1.00 1.61 ATOM 375 SG CYS 22 -2.298 -2.790 0.243 1.00 1.61 ATOM 376 C CYS 22 -5.717 -4.183 -1.617 1.00 1.61 ATOM 377 O CYS 22 -6.512 -4.501 -0.732 1.00 1.61 ATOM 378 N ASP 23 -5.833 -4.598 -2.889 1.00 2.11 ATOM 380 CA ASP 23 -7.114 -5.187 -3.302 1.00 2.11 ATOM 382 CB ASP 23 -7.686 -4.373 -4.469 1.00 2.11 ATOM 385 CG ASP 23 -9.157 -4.681 -4.758 1.00 2.11 ATOM 386 OD1 ASP 23 -9.513 -5.863 -4.994 1.00 2.11 ATOM 387 OD2 ASP 23 -9.940 -3.703 -4.740 1.00 2.11 ATOM 388 C ASP 23 -6.948 -6.687 -3.569 1.00 2.11 ATOM 389 O ASP 23 -6.950 -7.164 -4.696 1.00 2.11 ATOM 390 N GLU 24 -6.731 -7.448 -2.489 1.00 2.58 ATOM 392 CA GLU 24 -6.209 -8.829 -2.506 1.00 2.58 ATOM 394 CB GLU 24 -5.840 -9.269 -1.083 1.00 2.58 ATOM 397 CG GLU 24 -4.835 -8.289 -0.452 1.00 2.58 ATOM 400 CD GLU 24 -4.115 -8.928 0.727 1.00 2.58 ATOM 401 OE1 GLU 24 -2.927 -9.283 0.571 1.00 2.58 ATOM 402 OE2 GLU 24 -4.737 -9.087 1.804 1.00 2.58 ATOM 403 C GLU 24 -7.032 -9.885 -3.270 1.00 2.58 ATOM 404 O GLU 24 -6.660 -11.052 -3.348 1.00 2.58 ATOM 405 N SER 25 -8.085 -9.457 -3.958 1.00 2.90 ATOM 407 CA SER 25 -8.728 -10.157 -5.069 1.00 2.90 ATOM 409 CB SER 25 -9.801 -9.230 -5.665 1.00 2.90 ATOM 412 OG SER 25 -9.221 -8.134 -6.348 1.00 2.90 ATOM 414 C SER 25 -7.825 -10.670 -6.203 1.00 2.90 ATOM 415 O SER 25 -8.285 -11.501 -6.988 1.00 2.90 ATOM 416 N ASN 26 -6.581 -10.177 -6.261 1.00 3.52 ATOM 418 CA ASN 26 -5.483 -10.253 -7.258 1.00 3.52 ATOM 420 CB ASN 26 -5.749 -11.161 -8.487 1.00 3.52 ATOM 423 CG ASN 26 -5.455 -12.632 -8.233 1.00 3.52 ATOM 424 OD1 ASN 26 -4.392 -13.145 -8.527 1.00 3.52 ATOM 425 ND2 ASN 26 -6.382 -13.360 -7.668 1.00 3.52 ATOM 428 C ASN 26 -5.067 -8.835 -7.702 1.00 3.52 ATOM 429 O ASN 26 -4.033 -8.669 -8.348 1.00 3.52 ATOM 430 N HIS 27 -5.860 -7.813 -7.368 1.00 2.90 ATOM 432 CA HIS 27 -5.615 -6.421 -7.720 1.00 2.90 ATOM 434 CB HIS 27 -6.967 -5.726 -7.918 1.00 2.90 ATOM 437 CG HIS 27 -6.869 -4.271 -8.307 1.00 2.90 ATOM 438 ND1 HIS 27 -5.923 -3.721 -9.187 1.00 2.90 ATOM 439 CE1 HIS 27 -6.197 -2.410 -9.232 1.00 2.90 ATOM 441 NE2 HIS 27 -7.246 -2.115 -8.447 1.00 2.90 ATOM 443 CD2 HIS 27 -7.684 -3.275 -7.856 1.00 2.90 ATOM 445 C HIS 27 -4.675 -5.711 -6.727 1.00 2.90 ATOM 446 O HIS 27 -4.621 -5.933 -5.513 1.00 2.90 ATOM 447 N CYS 28 -3.835 -4.880 -7.340 1.00 2.28 ATOM 449 CA CYS 28 -2.625 -4.342 -6.748 1.00 2.28 ATOM 451 CB CYS 28 -1.840 -3.612 -7.858 1.00 2.28 ATOM 454 SG CYS 28 -1.347 -4.684 -9.240 1.00 2.28 ATOM 455 C CYS 28 -2.894 -3.455 -5.523 1.00 2.28 ATOM 456 O CYS 28 -4.011 -3.251 -5.032 1.00 2.28 ATOM 457 N VAL 29 -1.802 -2.874 -5.035 1.00 1.69 ATOM 459 CA VAL 29 -1.897 -1.709 -4.180 1.00 1.69 ATOM 461 CB VAL 29 -0.659 -1.588 -3.266 1.00 1.69 ATOM 463 CG1 VAL 29 -0.923 -0.583 -2.148 1.00 1.69 ATOM 467 CG2 VAL 29 -0.246 -2.933 -2.645 1.00 1.69 ATOM 471 C VAL 29 -2.037 -0.467 -5.057 1.00 1.69 ATOM 472 O VAL 29 -1.287 -0.269 -6.013 1.00 1.69 ATOM 473 N GLU 30 -2.939 0.426 -4.681 1.00 1.26 ATOM 475 CA GLU 30 -2.857 1.842 -5.009 1.00 1.26 ATOM 477 CB GLU 30 -4.211 2.389 -5.470 1.00 1.26 ATOM 480 CG GLU 30 -4.817 1.634 -6.660 1.00 1.26 ATOM 483 CD GLU 30 -5.849 2.487 -7.403 1.00 1.26 ATOM 484 OE1 GLU 30 -5.949 2.319 -8.637 1.00 1.26 ATOM 485 OE2 GLU 30 -6.393 3.458 -6.824 1.00 1.26 ATOM 486 C GLU 30 -2.417 2.600 -3.766 1.00 1.26 ATOM 487 O GLU 30 -2.949 2.388 -2.679 1.00 1.26 ATOM 488 N VAL 31 -1.474 3.521 -3.932 1.00 1.23 ATOM 490 CA VAL 31 -1.006 4.374 -2.841 1.00 1.23 ATOM 492 CB VAL 31 0.453 4.070 -2.453 1.00 1.23 ATOM 494 CG1 VAL 31 0.986 5.073 -1.425 1.00 1.23 ATOM 498 CG2 VAL 31 0.630 2.650 -1.913 1.00 1.23 ATOM 502 C VAL 31 -1.193 5.821 -3.270 1.00 1.23 ATOM 503 O VAL 31 -0.588 6.273 -4.237 1.00 1.23 ATOM 504 N ARG 32 -2.067 6.551 -2.570 1.00 1.31 ATOM 506 CA ARG 32 -2.457 7.911 -2.963 1.00 1.31 ATOM 508 CB ARG 32 -3.986 8.085 -3.002 1.00 1.31 ATOM 511 CG ARG 32 -4.717 7.404 -4.164 1.00 1.31 ATOM 514 CD ARG 32 -4.883 5.877 -4.016 1.00 1.31 ATOM 517 NE ARG 32 -6.009 5.355 -4.822 1.00 1.31 ATOM 519 CZ ARG 32 -7.296 5.618 -4.692 1.00 1.31 ATOM 520 NH1 ARG 32 -8.122 5.131 -5.571 1.00 1.31 ATOM 523 NH2 ARG 32 -7.796 6.334 -3.724 1.00 1.31 ATOM 526 C ARG 32 -1.845 8.945 -2.020 1.00 1.31 ATOM 527 O ARG 32 -2.045 8.860 -0.802 1.00 1.31 ATOM 528 N CYS 33 -1.100 9.907 -2.573 1.00 1.77 ATOM 530 CA CYS 33 -0.269 10.800 -1.782 1.00 1.77 ATOM 532 CB CYS 33 1.080 10.122 -1.575 1.00 1.77 ATOM 535 SG CYS 33 1.722 10.448 0.068 1.00 1.77 ATOM 536 C CYS 33 -0.081 12.197 -2.368 1.00 1.77 ATOM 537 O CYS 33 0.735 12.393 -3.271 1.00 1.77 ATOM 538 N SER 34 -0.801 13.183 -1.826 1.00 2.92 ATOM 540 CA SER 34 -1.012 14.441 -2.547 1.00 2.92 ATOM 542 CB SER 34 0.287 15.283 -2.535 1.00 2.92 ATOM 545 OG SER 34 0.052 16.617 -2.931 1.00 2.92 ATOM 547 C SER 34 -1.573 14.109 -3.958 1.00 2.92 ATOM 548 O SER 34 -2.301 13.133 -4.140 1.00 2.92 ATOM 549 N ASP 35 -1.196 14.903 -4.951 1.00 4.35 ATOM 551 CA ASP 35 -1.241 14.643 -6.395 1.00 4.35 ATOM 553 CB ASP 35 -0.367 15.729 -7.054 1.00 4.35 ATOM 556 CG ASP 35 1.000 15.832 -6.360 1.00 4.35 ATOM 557 OD1 ASP 35 1.926 15.097 -6.764 1.00 4.35 ATOM 558 OD2 ASP 35 1.064 16.559 -5.338 1.00 4.35 ATOM 559 C ASP 35 -0.752 13.250 -6.849 1.00 4.35 ATOM 560 O ASP 35 -1.290 12.679 -7.800 1.00 4.35 ATOM 561 N THR 36 0.264 12.693 -6.190 1.00 3.25 ATOM 563 CA THR 36 1.018 11.541 -6.683 1.00 3.25 ATOM 565 CB THR 36 2.497 11.660 -6.275 1.00 3.25 ATOM 567 CG2 THR 36 3.310 10.418 -6.643 1.00 3.25 ATOM 571 OG1 THR 36 3.104 12.712 -6.999 1.00 3.25 ATOM 573 C THR 36 0.358 10.224 -6.260 1.00 3.25 ATOM 574 O THR 36 0.474 9.738 -5.130 1.00 3.25 ATOM 575 N LYS 37 -0.343 9.608 -7.218 1.00 2.33 ATOM 577 CA LYS 37 -0.900 8.249 -7.130 1.00 2.33 ATOM 579 CB LYS 37 -2.253 8.233 -7.867 1.00 2.33 ATOM 582 CG LYS 37 -3.085 6.949 -7.677 1.00 2.33 ATOM 585 CD LYS 37 -3.030 5.983 -8.869 1.00 2.33 ATOM 588 CE LYS 37 -4.060 4.872 -8.660 1.00 2.33 ATOM 591 NZ LYS 37 -4.051 3.864 -9.749 1.00 2.33 ATOM 595 C LYS 37 0.104 7.215 -7.644 1.00 2.33 ATOM 596 O LYS 37 0.099 6.842 -8.817 1.00 2.33 ATOM 597 N TYR 38 0.944 6.713 -6.745 1.00 2.07 ATOM 599 CA TYR 38 1.647 5.442 -6.928 1.00 2.07 ATOM 601 CB TYR 38 2.503 5.164 -5.686 1.00 2.07 ATOM 604 CG TYR 38 3.692 6.076 -5.460 1.00 2.07 ATOM 605 CD1 TYR 38 3.564 7.215 -4.639 1.00 2.07 ATOM 607 CE1 TYR 38 4.679 8.040 -4.396 1.00 2.07 ATOM 609 CZ TYR 38 5.929 7.726 -4.969 1.00 2.07 ATOM 610 OH TYR 38 7.001 8.528 -4.732 1.00 2.07 ATOM 612 CE2 TYR 38 6.061 6.575 -5.780 1.00 2.07 ATOM 614 CD2 TYR 38 4.942 5.752 -6.022 1.00 2.07 ATOM 616 C TYR 38 0.639 4.304 -7.163 1.00 2.07 ATOM 617 O TYR 38 -0.497 4.286 -6.678 1.00 2.07 ATOM 618 N THR 39 1.086 3.294 -7.898 1.00 1.98 ATOM 620 CA THR 39 0.434 1.988 -8.017 1.00 1.98 ATOM 622 CB THR 39 -0.426 1.903 -9.282 1.00 1.98 ATOM 624 CG2 THR 39 -1.097 0.546 -9.485 1.00 1.98 ATOM 628 OG1 THR 39 -1.462 2.848 -9.137 1.00 1.98 ATOM 630 C THR 39 1.553 0.961 -8.008 1.00 1.98 ATOM 631 O THR 39 2.562 1.122 -8.692 1.00 1.98 ATOM 632 N LEU 40 1.411 -0.028 -7.136 1.00 2.75 ATOM 634 CA LEU 40 2.476 -0.863 -6.616 1.00 2.75 ATOM 636 CB LEU 40 2.980 -0.289 -5.273 1.00 2.75 ATOM 639 CG LEU 40 3.724 1.055 -5.381 1.00 2.75 ATOM 641 CD1 LEU 40 4.003 1.611 -3.982 1.00 2.75 ATOM 645 CD2 LEU 40 5.060 0.919 -6.113 1.00 2.75 ATOM 649 C LEU 40 1.934 -2.285 -6.481 1.00 2.75 ATOM 650 O LEU 40 1.138 -2.586 -5.599 1.00 2.75 ATOM 651 N CYS 41 2.302 -3.172 -7.394 1.00 3.85 ATOM 653 CA CYS 41 1.752 -4.524 -7.423 1.00 3.85 ATOM 655 CB CYS 41 1.660 -4.979 -8.882 1.00 3.85 ATOM 658 SG CYS 41 0.477 -4.010 -9.864 1.00 3.85 ATOM 659 C CYS 41 2.540 -5.503 -6.541 1.00 3.85 ATOM 660 O CYS 41 3.529 -5.183 -5.881 1.00 3.85 TER END