####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS157_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS157_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 4.90 4.90 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 1 - 19 1.73 9.58 LONGEST_CONTINUOUS_SEGMENT: 19 2 - 20 1.67 8.74 LCS_AVERAGE: 38.73 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.97 10.04 LONGEST_CONTINUOUS_SEGMENT: 15 3 - 17 0.98 9.67 LCS_AVERAGE: 26.83 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 19 41 0 3 3 5 7 9 10 20 21 21 23 25 27 27 30 35 36 37 37 37 LCS_GDT Q 2 Q 2 15 19 41 8 13 15 18 19 21 22 22 24 30 34 34 35 36 36 37 39 40 40 40 LCS_GDT E 3 E 3 15 19 41 8 13 15 18 19 21 22 23 28 31 34 34 35 36 37 38 39 40 40 40 LCS_GDT T 4 T 4 15 19 41 8 13 15 18 19 21 22 22 24 28 34 34 35 36 36 37 39 40 40 40 LCS_GDT R 5 R 5 15 19 41 8 13 15 18 19 21 22 25 28 31 34 34 35 36 37 38 39 40 40 40 LCS_GDT K 6 K 6 15 19 41 8 13 15 18 19 22 24 27 29 31 34 36 36 36 37 38 39 40 40 40 LCS_GDT K 7 K 7 15 19 41 8 13 15 18 19 21 22 25 29 31 34 36 36 36 37 38 39 40 40 40 LCS_GDT C 8 C 8 15 19 41 8 13 15 18 19 21 22 27 29 31 34 36 36 36 37 38 39 40 40 40 LCS_GDT T 9 T 9 15 19 41 8 13 15 18 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT E 10 E 10 15 19 41 6 13 15 18 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT M 11 M 11 15 19 41 6 13 15 18 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT K 12 K 12 15 19 41 6 13 15 18 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT K 13 K 13 15 19 41 6 13 15 18 19 21 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT K 14 K 14 15 19 41 5 13 15 18 19 21 23 26 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT F 15 F 15 15 19 41 6 13 15 18 19 21 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT K 16 K 16 15 19 41 3 7 14 18 19 21 23 26 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT N 17 N 17 15 19 41 6 11 15 18 19 21 23 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT C 18 C 18 14 19 41 6 11 15 18 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT E 19 E 19 14 19 41 6 10 15 18 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT V 20 V 20 5 19 41 4 5 11 16 18 20 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT R 21 R 21 5 16 41 4 10 13 16 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT C 22 C 22 5 9 41 4 5 6 13 16 20 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT D 23 D 23 5 9 41 3 5 12 15 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT E 24 E 24 5 9 41 3 4 6 10 16 20 24 26 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT S 25 S 25 4 9 41 3 4 5 6 10 15 18 22 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT N 26 N 26 4 9 41 3 4 5 9 11 15 21 25 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT H 27 H 27 4 14 41 3 4 5 8 11 15 21 25 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT C 28 C 28 11 14 41 6 10 13 16 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT V 29 V 29 11 14 41 6 10 13 16 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT E 30 E 30 11 14 41 6 10 13 16 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT V 31 V 31 11 14 41 6 10 13 16 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT R 32 R 32 11 14 41 6 10 13 16 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT C 33 C 33 11 14 41 6 10 14 17 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT S 34 S 34 11 14 41 6 10 13 16 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT D 35 D 35 11 14 41 4 10 13 16 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT T 36 T 36 11 14 41 4 6 13 16 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT K 37 K 37 11 14 41 3 10 13 16 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT Y 38 Y 38 11 14 41 3 8 12 16 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT T 39 T 39 10 14 41 3 8 12 16 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT L 40 L 40 6 14 41 3 6 12 16 18 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 LCS_GDT C 41 C 41 6 14 41 3 6 10 16 18 19 24 27 29 31 34 36 36 36 37 38 39 40 40 40 LCS_AVERAGE LCS_A: 55.19 ( 26.83 38.73 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 13 15 18 19 22 24 27 29 32 34 36 36 36 37 38 39 40 40 40 GDT PERCENT_AT 19.51 31.71 36.59 43.90 46.34 53.66 58.54 65.85 70.73 78.05 82.93 87.80 87.80 87.80 90.24 92.68 95.12 97.56 97.56 97.56 GDT RMS_LOCAL 0.37 0.67 0.88 1.14 1.25 1.84 2.05 2.43 2.68 3.17 3.42 3.60 3.60 3.60 3.87 4.06 4.29 4.51 4.51 4.51 GDT RMS_ALL_AT 11.45 10.44 9.87 9.16 9.00 5.20 5.20 5.24 5.04 5.99 5.53 5.43 5.43 5.43 5.24 5.13 5.03 4.95 4.95 4.95 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 15.647 0 0.069 0.130 17.199 0.000 0.000 17.199 LGA Q 2 Q 2 10.850 0 0.648 1.341 12.810 0.000 0.000 9.698 LGA E 3 E 3 9.124 0 0.030 1.421 11.224 0.000 0.000 10.874 LGA T 4 T 4 10.335 0 0.054 1.061 13.570 0.000 0.000 13.570 LGA R 5 R 5 8.230 0 0.028 1.011 16.928 0.000 0.000 16.928 LGA K 6 K 6 3.873 0 0.056 1.242 8.165 15.000 8.081 7.917 LGA K 7 K 7 5.585 0 0.035 0.659 13.201 0.455 0.202 13.201 LGA C 8 C 8 5.417 0 0.091 0.746 6.629 4.091 2.727 6.511 LGA T 9 T 9 2.891 0 0.047 0.122 4.766 35.000 24.416 4.766 LGA E 10 E 10 1.645 0 0.042 0.630 6.519 48.636 25.253 6.519 LGA M 11 M 11 2.717 0 0.016 1.076 10.120 41.818 21.591 10.120 LGA K 12 K 12 1.910 0 0.023 0.660 6.188 45.455 23.030 6.188 LGA K 13 K 13 3.514 0 0.039 1.033 9.412 13.636 7.273 9.412 LGA K 14 K 14 4.840 0 0.014 0.874 5.786 3.636 2.222 5.435 LGA F 15 F 15 3.005 0 0.184 0.156 6.803 28.636 15.372 6.803 LGA K 16 K 16 5.300 0 0.077 1.269 13.030 1.818 0.808 13.030 LGA N 17 N 17 4.149 0 0.210 0.243 6.189 10.909 5.682 5.523 LGA C 18 C 18 1.282 0 0.024 0.032 3.065 62.727 53.333 3.065 LGA E 19 E 19 2.056 0 0.495 0.874 8.990 36.818 17.576 8.990 LGA V 20 V 20 3.525 0 0.090 0.119 7.870 26.364 15.065 7.660 LGA R 21 R 21 0.617 0 0.048 1.119 11.891 54.091 22.314 11.891 LGA C 22 C 22 4.495 0 0.043 0.148 9.201 15.000 10.000 9.201 LGA D 23 D 23 2.185 0 0.218 1.294 6.385 15.455 17.727 4.322 LGA E 24 E 24 6.150 0 0.257 0.534 7.911 0.455 0.202 7.911 LGA S 25 S 25 8.261 0 0.184 0.657 10.314 0.000 0.000 10.314 LGA N 26 N 26 7.538 0 0.094 1.200 8.851 0.000 0.000 8.851 LGA H 27 H 27 6.716 0 0.652 1.284 15.443 4.091 1.636 15.245 LGA C 28 C 28 1.038 0 0.618 0.587 3.805 52.273 38.485 3.805 LGA V 29 V 29 0.368 0 0.039 0.061 1.078 100.000 89.870 1.078 LGA E 30 E 30 0.814 0 0.028 0.186 2.744 81.818 59.596 2.655 LGA V 31 V 31 0.569 0 0.051 1.161 2.331 86.364 74.545 2.293 LGA R 32 R 32 0.917 0 0.179 1.261 5.649 69.545 46.446 1.600 LGA C 33 C 33 1.500 0 0.088 0.103 1.982 54.545 55.758 1.492 LGA S 34 S 34 1.158 0 0.087 0.636 2.139 65.455 60.909 2.139 LGA D 35 D 35 1.711 0 0.068 1.007 5.552 51.364 32.727 5.552 LGA T 36 T 36 1.809 0 0.192 1.043 4.520 58.182 48.312 1.270 LGA K 37 K 37 0.766 0 0.091 1.478 3.897 63.182 50.909 3.897 LGA Y 38 Y 38 2.490 0 0.075 1.391 5.765 52.273 26.364 5.765 LGA T 39 T 39 2.948 0 0.182 1.084 6.498 14.091 8.831 6.498 LGA L 40 L 40 3.377 0 0.196 0.939 6.202 31.364 17.273 5.053 LGA C 41 C 41 5.220 1 0.488 0.586 7.614 0.455 0.260 7.614 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 4.899 4.757 6.089 30.366 21.580 9.712 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 27 2.43 58.537 55.478 1.068 LGA_LOCAL RMSD: 2.427 Number of atoms: 27 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.242 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 4.899 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.266923 * X + 0.633321 * Y + -0.726400 * Z + 0.421327 Y_new = 0.582756 * X + -0.494256 * Y + -0.645063 * Z + -1.241325 Z_new = -0.767560 * X + -0.595496 * Y + -0.237143 * Z + 2.703305 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.000312 0.875025 -1.949774 [DEG: 114.6095 50.1353 -111.7138 ] ZXZ: -0.844635 1.810220 -2.230625 [DEG: -48.3940 103.7180 -127.8054 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS157_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS157_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 27 2.43 55.478 4.90 REMARK ---------------------------------------------------------- MOLECULE T0955TS157_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 N SER 1 4.147 -13.520 15.485 1.00 0.00 N ATOM 2 CA SER 1 3.760 -12.676 14.373 1.00 0.00 C ATOM 3 C SER 1 2.452 -13.047 13.690 1.00 0.00 C ATOM 4 O SER 1 2.073 -14.216 13.660 1.00 0.00 O ATOM 5 CB SER 1 4.855 -12.664 13.303 1.00 0.00 C ATOM 6 OG SER 1 6.051 -12.094 13.804 1.00 0.00 O ATOM 7 N GLN 2 1.768 -12.040 13.142 1.00 0.85 N ATOM 8 CA GLN 2 0.499 -12.245 12.472 1.00 0.85 C ATOM 9 C GLN 2 0.585 -11.802 11.018 1.00 0.85 C ATOM 10 O GLN 2 1.338 -10.890 10.687 1.00 0.85 O ATOM 11 CB GLN 2 -0.617 -11.488 13.194 1.00 0.85 C ATOM 12 CD GLN 2 -2.010 -11.221 15.284 1.00 0.85 C ATOM 13 CG GLN 2 -0.874 -11.967 14.614 1.00 0.85 C ATOM 14 OE1 GLN 2 -2.104 -9.997 15.189 1.00 0.85 O ATOM 15 NE2 GLN 2 -2.881 -11.958 15.964 1.00 0.85 N ATOM 16 N GLU 3 -0.190 -12.450 10.144 1.00 0.12 N ATOM 17 CA GLU 3 -0.198 -12.101 8.738 1.00 0.12 C ATOM 18 C GLU 3 -0.762 -10.717 8.454 1.00 0.12 C ATOM 19 O GLU 3 -0.361 -10.064 7.493 1.00 0.12 O ATOM 20 CB GLU 3 -0.997 -13.129 7.935 1.00 0.12 C ATOM 21 CD GLU 3 0.993 -14.479 7.162 1.00 0.12 C ATOM 22 CG GLU 3 -0.349 -14.503 7.866 1.00 0.12 C ATOM 23 OE1 GLU 3 1.076 -13.896 6.060 1.00 0.12 O ATOM 24 OE2 GLU 3 1.963 -15.043 7.712 1.00 0.12 O ATOM 25 N THR 4 -1.698 -10.255 9.287 1.00 0.09 N ATOM 26 CA THR 4 -2.223 -8.916 9.112 1.00 0.09 C ATOM 27 C THR 4 -1.162 -7.869 9.418 1.00 0.09 C ATOM 28 O THR 4 -1.124 -6.816 8.785 1.00 0.09 O ATOM 29 CB THR 4 -3.455 -8.672 10.004 1.00 0.09 C ATOM 30 OG1 THR 4 -3.095 -8.845 11.379 1.00 0.09 O ATOM 31 CG2 THR 4 -4.564 -9.656 9.663 1.00 0.09 C ATOM 32 N ARG 5 -0.297 -8.159 10.393 1.00 0.04 N ATOM 33 CA ARG 5 0.766 -7.245 10.759 1.00 0.04 C ATOM 34 C ARG 5 1.691 -6.977 9.582 1.00 0.04 C ATOM 35 O ARG 5 2.126 -5.846 9.374 1.00 0.04 O ATOM 36 CB ARG 5 1.566 -7.799 11.940 1.00 0.04 C ATOM 37 CD ARG 5 1.640 -8.412 14.373 1.00 0.04 C ATOM 38 NE ARG 5 0.934 -8.399 15.652 1.00 0.04 N ATOM 39 CG ARG 5 0.814 -7.786 13.260 1.00 0.04 C ATOM 40 CZ ARG 5 1.355 -9.032 16.743 1.00 0.04 C ATOM 41 NH1 ARG 5 0.647 -8.964 17.862 1.00 0.04 N ATOM 42 NH2 ARG 5 2.480 -9.731 16.712 1.00 0.04 N ATOM 43 N LYS 6 1.998 -8.018 8.804 1.00 0.03 N ATOM 44 CA LYS 6 2.914 -7.880 7.690 1.00 0.03 C ATOM 45 C LYS 6 2.320 -6.957 6.636 1.00 0.03 C ATOM 46 O LYS 6 3.041 -6.189 6.003 1.00 0.03 O ATOM 47 CB LYS 6 3.236 -9.249 7.089 1.00 0.03 C ATOM 48 CD LYS 6 4.363 -11.479 7.327 1.00 0.03 C ATOM 49 CE LYS 6 5.223 -12.362 8.217 1.00 0.03 C ATOM 50 CG LYS 6 4.093 -10.133 7.980 1.00 0.03 C ATOM 51 NZ LYS 6 5.460 -13.700 7.608 1.00 0.03 N ATOM 52 N LYS 7 1.001 -7.034 6.448 1.00 0.03 N ATOM 53 CA LYS 7 0.313 -6.211 5.474 1.00 0.03 C ATOM 54 C LYS 7 0.361 -4.737 5.849 1.00 0.03 C ATOM 55 O LYS 7 0.542 -3.879 4.988 1.00 0.03 O ATOM 56 CB LYS 7 -1.141 -6.660 5.325 1.00 0.03 C ATOM 57 CD LYS 7 -2.773 -8.398 4.538 1.00 0.03 C ATOM 58 CE LYS 7 -2.938 -9.744 3.852 1.00 0.03 C ATOM 59 CG LYS 7 -1.307 -8.008 4.642 1.00 0.03 C ATOM 60 NZ LYS 7 -4.367 -10.159 3.781 1.00 0.03 N ATOM 61 N CYS 8 0.197 -4.440 7.141 1.00 0.02 N ATOM 62 CA CYS 8 0.198 -3.066 7.602 1.00 0.02 C ATOM 63 C CYS 8 1.591 -2.454 7.601 1.00 0.02 C ATOM 64 O CYS 8 1.746 -1.256 7.374 1.00 0.02 O ATOM 65 CB CYS 8 -0.397 -2.973 9.009 1.00 0.02 C ATOM 66 SG CYS 8 -2.171 -3.311 9.095 1.00 0.02 S ATOM 67 N THR 9 2.615 -3.272 7.855 1.00 0.02 N ATOM 68 CA THR 9 3.992 -2.821 7.872 1.00 0.02 C ATOM 69 C THR 9 4.504 -2.516 6.472 1.00 0.02 C ATOM 70 O THR 9 5.279 -1.581 6.281 1.00 0.02 O ATOM 71 CB THR 9 4.918 -3.862 8.529 1.00 0.02 C ATOM 72 OG1 THR 9 4.516 -4.073 9.888 1.00 0.02 O ATOM 73 CG2 THR 9 6.359 -3.374 8.517 1.00 0.02 C ATOM 74 N GLU 10 4.076 -3.301 5.480 1.00 0.02 N ATOM 75 CA GLU 10 4.492 -3.049 4.115 1.00 0.02 C ATOM 76 C GLU 10 3.956 -1.722 3.596 1.00 0.02 C ATOM 77 O GLU 10 4.636 -1.026 2.845 1.00 0.02 O ATOM 78 CB GLU 10 4.036 -4.185 3.198 1.00 0.02 C ATOM 79 CD GLU 10 4.233 -6.619 2.553 1.00 0.02 C ATOM 80 CG GLU 10 4.754 -5.503 3.437 1.00 0.02 C ATOM 81 OE1 GLU 10 3.191 -6.417 1.893 1.00 0.02 O ATOM 82 OE2 GLU 10 4.867 -7.695 2.519 1.00 0.02 O ATOM 83 N MET 11 2.735 -1.351 3.985 1.00 0.05 N ATOM 84 CA MET 11 2.169 -0.106 3.504 1.00 0.05 C ATOM 85 C MET 11 2.894 1.099 4.087 1.00 0.05 C ATOM 86 O MET 11 2.983 2.144 3.444 1.00 0.05 O ATOM 87 CB MET 11 0.679 -0.029 3.842 1.00 0.05 C ATOM 88 SD MET 11 -1.375 0.101 5.695 1.00 0.05 S ATOM 89 CE MET 11 -1.962 1.543 4.813 1.00 0.05 C ATOM 90 CG MET 11 0.387 0.164 5.321 1.00 0.05 C ATOM 91 N LYS 12 3.416 0.964 5.307 1.00 0.03 N ATOM 92 CA LYS 12 4.092 2.074 5.950 1.00 0.03 C ATOM 93 C LYS 12 5.399 2.412 5.245 1.00 0.03 C ATOM 94 O LYS 12 5.775 3.578 5.154 1.00 0.03 O ATOM 95 CB LYS 12 4.361 1.757 7.422 1.00 0.03 C ATOM 96 CD LYS 12 3.450 1.390 9.732 1.00 0.03 C ATOM 97 CE LYS 12 2.200 1.356 10.597 1.00 0.03 C ATOM 98 CG LYS 12 3.111 1.721 8.288 1.00 0.03 C ATOM 99 NZ LYS 12 2.511 0.991 12.007 1.00 0.03 N ATOM 100 N LYS 13 6.086 1.382 4.747 1.00 0.02 N ATOM 101 CA LYS 13 7.345 1.568 4.055 1.00 0.02 C ATOM 102 C LYS 13 7.178 2.003 2.606 1.00 0.02 C ATOM 103 O LYS 13 7.914 2.860 2.123 1.00 0.02 O ATOM 104 CB LYS 13 8.172 0.282 4.093 1.00 0.02 C ATOM 105 CD LYS 13 10.352 -0.868 3.616 1.00 0.02 C ATOM 106 CE LYS 13 11.719 -0.745 2.963 1.00 0.02 C ATOM 107 CG LYS 13 9.539 0.405 3.440 1.00 0.02 C ATOM 108 NZ LYS 13 12.526 -1.985 3.128 1.00 0.02 N ATOM 109 N LYS 14 6.205 1.407 1.913 1.00 0.05 N ATOM 110 CA LYS 14 6.062 1.580 0.482 1.00 0.05 C ATOM 111 C LYS 14 5.504 2.947 0.112 1.00 0.05 C ATOM 112 O LYS 14 5.860 3.507 -0.922 1.00 0.05 O ATOM 113 CB LYS 14 5.161 0.491 -0.103 1.00 0.05 C ATOM 114 CD LYS 14 7.014 -1.010 -0.886 1.00 0.05 C ATOM 115 CE LYS 14 7.545 -2.434 -0.915 1.00 0.05 C ATOM 116 CG LYS 14 5.757 -0.907 -0.039 1.00 0.05 C ATOM 117 NZ LYS 14 8.785 -2.549 -1.732 1.00 0.05 N ATOM 118 N PHE 15 4.625 3.496 0.953 1.00 0.83 N ATOM 119 CA PHE 15 3.940 4.744 0.684 1.00 0.83 C ATOM 120 C PHE 15 4.310 5.732 1.780 1.00 0.83 C ATOM 121 O PHE 15 3.602 5.850 2.778 1.00 0.83 O ATOM 122 CB PHE 15 2.428 4.520 0.610 1.00 0.83 C ATOM 123 CG PHE 15 2.006 3.590 -0.491 1.00 0.83 C ATOM 124 CZ PHE 15 1.227 1.872 -2.531 1.00 0.83 C ATOM 125 CD1 PHE 15 1.440 2.361 -0.199 1.00 0.83 C ATOM 126 CE1 PHE 15 1.052 1.504 -1.211 1.00 0.83 C ATOM 127 CD2 PHE 15 2.175 3.942 -1.818 1.00 0.83 C ATOM 128 CE2 PHE 15 1.787 3.086 -2.831 1.00 0.83 C ATOM 129 N LYS 16 5.433 6.409 1.530 1.00 0.30 N ATOM 130 CA LYS 16 6.019 7.339 2.474 1.00 0.30 C ATOM 131 C LYS 16 5.099 8.549 2.551 1.00 0.30 C ATOM 132 O LYS 16 5.025 9.211 3.583 1.00 0.30 O ATOM 133 CB LYS 16 7.436 7.721 2.041 1.00 0.30 C ATOM 134 CD LYS 16 9.832 7.043 1.723 1.00 0.30 C ATOM 135 CE LYS 16 10.849 5.922 1.867 1.00 0.30 C ATOM 136 CG LYS 16 8.448 6.594 2.164 1.00 0.30 C ATOM 137 NZ LYS 16 12.198 6.332 1.392 1.00 0.30 N ATOM 138 N ASN 17 4.383 8.861 1.468 1.00 0.13 N ATOM 139 CA ASN 17 3.554 10.047 1.415 1.00 0.13 C ATOM 140 C ASN 17 2.082 9.811 1.108 1.00 0.13 C ATOM 141 O ASN 17 1.348 10.751 0.809 1.00 0.13 O ATOM 142 CB ASN 17 4.101 11.038 0.385 1.00 0.13 C ATOM 143 CG ASN 17 5.435 11.629 0.796 1.00 0.13 C ATOM 144 OD1 ASN 17 5.498 12.494 1.669 1.00 0.13 O ATOM 145 ND2 ASN 17 6.507 11.163 0.167 1.00 0.13 N ATOM 146 N CYS 18 1.670 8.544 1.187 1.00 0.07 N ATOM 147 CA CYS 18 0.308 8.150 0.892 1.00 0.07 C ATOM 148 C CYS 18 -0.351 7.553 2.126 1.00 0.07 C ATOM 149 O CYS 18 0.327 6.991 2.984 1.00 0.07 O ATOM 150 CB CYS 18 0.279 7.152 -0.267 1.00 0.07 C ATOM 151 SG CYS 18 0.956 7.787 -1.818 1.00 0.07 S ATOM 152 N GLU 19 -1.677 7.685 2.196 1.00 0.83 N ATOM 153 CA GLU 19 -2.423 7.089 3.287 1.00 0.83 C ATOM 154 C GLU 19 -3.515 6.103 2.897 1.00 0.83 C ATOM 155 O GLU 19 -4.020 5.366 3.742 1.00 0.83 O ATOM 156 CB GLU 19 -3.077 8.174 4.144 1.00 0.83 C ATOM 157 CD GLU 19 -2.772 10.155 5.682 1.00 0.83 C ATOM 158 CG GLU 19 -2.089 9.094 4.843 1.00 0.83 C ATOM 159 OE1 GLU 19 -4.021 10.209 5.669 1.00 0.83 O ATOM 160 OE2 GLU 19 -2.061 10.932 6.353 1.00 0.83 O ATOM 161 N VAL 20 -3.861 6.105 1.608 1.00 0.15 N ATOM 162 CA VAL 20 -4.839 5.167 1.096 1.00 0.15 C ATOM 163 C VAL 20 -4.195 3.895 0.563 1.00 0.15 C ATOM 164 O VAL 20 -3.199 3.955 -0.156 1.00 0.15 O ATOM 165 CB VAL 20 -5.702 5.798 -0.012 1.00 0.15 C ATOM 166 CG1 VAL 20 -6.664 4.771 -0.589 1.00 0.15 C ATOM 167 CG2 VAL 20 -6.460 7.003 0.524 1.00 0.15 C ATOM 168 N ARG 21 -4.767 2.743 0.919 1.00 0.21 N ATOM 169 CA ARG 21 -4.270 1.467 0.447 1.00 0.21 C ATOM 170 C ARG 21 -5.389 0.807 -0.344 1.00 0.21 C ATOM 171 O ARG 21 -6.532 0.767 0.106 1.00 0.21 O ATOM 172 CB ARG 21 -3.811 0.602 1.623 1.00 0.21 C ATOM 173 CD ARG 21 -2.744 -1.524 2.423 1.00 0.21 C ATOM 174 NE ARG 21 -2.246 -2.847 2.056 1.00 0.21 N ATOM 175 CG ARG 21 -3.256 -0.754 1.218 1.00 0.21 C ATOM 176 CZ ARG 21 -1.727 -3.716 2.918 1.00 0.21 C ATOM 177 NH1 ARG 21 -1.300 -4.897 2.493 1.00 0.21 N ATOM 178 NH2 ARG 21 -1.638 -3.402 4.203 1.00 0.21 N ATOM 179 N CYS 22 -5.062 0.285 -1.529 1.00 0.66 N ATOM 180 CA CYS 22 -6.043 -0.326 -2.403 1.00 0.66 C ATOM 181 C CYS 22 -5.665 -1.787 -2.593 1.00 0.66 C ATOM 182 O CYS 22 -4.504 -2.156 -2.433 1.00 0.66 O ATOM 183 CB CYS 22 -6.110 0.418 -3.737 1.00 0.66 C ATOM 184 SG CYS 22 -6.578 2.159 -3.600 1.00 0.66 S ATOM 185 N ASP 23 -6.614 -2.661 -2.936 1.00 0.21 N ATOM 186 CA ASP 23 -6.371 -4.054 -3.253 1.00 0.21 C ATOM 187 C ASP 23 -6.605 -4.243 -4.745 1.00 0.21 C ATOM 188 O ASP 23 -7.689 -3.955 -5.248 1.00 0.21 O ATOM 189 CB ASP 23 -7.279 -4.959 -2.417 1.00 0.21 C ATOM 190 CG ASP 23 -6.995 -6.433 -2.639 1.00 0.21 C ATOM 191 OD1 ASP 23 -6.236 -6.757 -3.576 1.00 0.21 O ATOM 192 OD2 ASP 23 -7.532 -7.262 -1.875 1.00 0.21 O ATOM 193 N GLU 24 -5.582 -4.730 -5.451 1.00 0.05 N ATOM 194 CA GLU 24 -5.709 -5.151 -6.831 1.00 0.05 C ATOM 195 C GLU 24 -6.285 -4.107 -7.777 1.00 0.05 C ATOM 196 O GLU 24 -6.805 -4.445 -8.837 1.00 0.05 O ATOM 197 CB GLU 24 -6.579 -6.405 -6.931 1.00 0.05 C ATOM 198 CD GLU 24 -6.886 -8.843 -6.347 1.00 0.05 C ATOM 199 CG GLU 24 -6.029 -7.604 -6.176 1.00 0.05 C ATOM 200 OE1 GLU 24 -7.827 -8.807 -7.168 1.00 0.05 O ATOM 201 OE2 GLU 24 -6.617 -9.851 -5.661 1.00 0.05 O ATOM 202 N SER 25 -6.198 -2.826 -7.409 1.00 0.06 N ATOM 203 CA SER 25 -6.737 -1.777 -8.250 1.00 0.06 C ATOM 204 C SER 25 -5.893 -1.696 -9.514 1.00 0.06 C ATOM 205 O SER 25 -6.295 -2.188 -10.566 1.00 0.06 O ATOM 206 CB SER 25 -6.755 -0.444 -7.499 1.00 0.06 C ATOM 207 OG SER 25 -5.439 -0.002 -7.213 1.00 0.06 O ATOM 208 N ASN 26 -4.719 -1.068 -9.396 1.00 0.07 N ATOM 209 CA ASN 26 -3.742 -1.111 -10.466 1.00 0.07 C ATOM 210 C ASN 26 -2.545 -1.972 -10.086 1.00 0.07 C ATOM 211 O ASN 26 -1.991 -2.675 -10.928 1.00 0.07 O ATOM 212 CB ASN 26 -3.290 0.303 -10.835 1.00 0.07 C ATOM 213 CG ASN 26 -4.396 1.119 -11.475 1.00 0.07 C ATOM 214 OD1 ASN 26 -5.154 0.614 -12.302 1.00 0.07 O ATOM 215 ND2 ASN 26 -4.491 2.387 -11.093 1.00 0.07 N ATOM 216 N HIS 27 -2.128 -1.930 -8.819 1.00 0.12 N ATOM 217 CA HIS 27 -1.016 -2.736 -8.354 1.00 0.12 C ATOM 218 C HIS 27 -1.551 -3.636 -7.249 1.00 0.12 C ATOM 219 O HIS 27 -2.756 -3.691 -7.017 1.00 0.12 O ATOM 220 CB HIS 27 0.129 -1.842 -7.872 1.00 0.12 C ATOM 221 CG HIS 27 0.722 -0.987 -8.948 1.00 0.12 C ATOM 222 ND1 HIS 27 0.119 0.166 -9.400 1.00 0.12 N ATOM 223 CE1 HIS 27 0.884 0.712 -10.361 1.00 0.12 C ATOM 224 CD2 HIS 27 1.925 -1.035 -9.767 1.00 0.12 C ATOM 225 NE2 HIS 27 1.968 -0.003 -10.587 1.00 0.12 N ATOM 226 N CYS 28 -0.632 -4.334 -6.578 1.00 0.21 N ATOM 227 CA CYS 28 -1.031 -5.255 -5.534 1.00 0.21 C ATOM 228 C CYS 28 -1.512 -4.482 -4.313 1.00 0.21 C ATOM 229 O CYS 28 -2.455 -4.897 -3.644 1.00 0.21 O ATOM 230 CB CYS 28 0.129 -6.182 -5.165 1.00 0.21 C ATOM 231 SG CYS 28 0.559 -7.386 -6.443 1.00 0.21 S ATOM 232 N VAL 29 -0.854 -3.355 -4.030 1.00 0.06 N ATOM 233 CA VAL 29 -1.369 -2.331 -3.144 1.00 0.06 C ATOM 234 C VAL 29 -1.112 -1.012 -3.859 1.00 0.06 C ATOM 235 O VAL 29 0.037 -0.622 -4.054 1.00 0.06 O ATOM 236 CB VAL 29 -0.704 -2.399 -1.756 1.00 0.06 C ATOM 237 CG1 VAL 29 -1.254 -1.309 -0.849 1.00 0.06 C ATOM 238 CG2 VAL 29 -0.911 -3.771 -1.133 1.00 0.06 C ATOM 239 N GLU 30 -2.167 -0.301 -4.262 1.00 0.02 N ATOM 240 CA GLU 30 -1.903 1.004 -4.832 1.00 0.02 C ATOM 241 C GLU 30 -1.902 1.999 -3.680 1.00 0.02 C ATOM 242 O GLU 30 -2.663 1.850 -2.727 1.00 0.02 O ATOM 243 CB GLU 30 -2.951 1.347 -5.893 1.00 0.02 C ATOM 244 CD GLU 30 -3.731 2.946 -7.686 1.00 0.02 C ATOM 245 CG GLU 30 -2.699 2.661 -6.613 1.00 0.02 C ATOM 246 OE1 GLU 30 -4.918 3.120 -7.337 1.00 0.02 O ATOM 247 OE2 GLU 30 -3.354 2.996 -8.875 1.00 0.02 O ATOM 248 N VAL 31 -1.035 3.008 -3.792 1.00 0.04 N ATOM 249 CA VAL 31 -0.922 4.035 -2.776 1.00 0.04 C ATOM 250 C VAL 31 -1.393 5.356 -3.369 1.00 0.04 C ATOM 251 O VAL 31 -0.891 5.788 -4.404 1.00 0.04 O ATOM 252 CB VAL 31 0.518 4.146 -2.243 1.00 0.04 C ATOM 253 CG1 VAL 31 1.483 4.459 -3.376 1.00 0.04 C ATOM 254 CG2 VAL 31 0.603 5.206 -1.156 1.00 0.04 C ATOM 255 N ARG 32 -2.359 5.996 -2.706 1.00 0.09 N ATOM 256 CA ARG 32 -2.904 7.264 -3.149 1.00 0.09 C ATOM 257 C ARG 32 -2.679 8.312 -2.068 1.00 0.09 C ATOM 258 O ARG 32 -3.047 8.106 -0.913 1.00 0.09 O ATOM 259 CB ARG 32 -4.392 7.122 -3.477 1.00 0.09 C ATOM 260 CD ARG 32 -6.177 6.115 -4.926 1.00 0.09 C ATOM 261 NE ARG 32 -6.477 5.210 -6.033 1.00 0.09 N ATOM 262 CG ARG 32 -4.685 6.197 -4.647 1.00 0.09 C ATOM 263 CZ ARG 32 -7.704 4.938 -6.463 1.00 0.09 C ATOM 264 NH1 ARG 32 -7.881 4.103 -7.478 1.00 0.09 N ATOM 265 NH2 ARG 32 -8.753 5.502 -5.878 1.00 0.09 N ATOM 266 N CYS 33 -2.070 9.432 -2.464 1.00 0.81 N ATOM 267 CA CYS 33 -1.815 10.530 -1.554 1.00 0.81 C ATOM 268 C CYS 33 -2.733 11.723 -1.777 1.00 0.81 C ATOM 269 O CYS 33 -3.816 11.793 -1.199 1.00 0.81 O ATOM 270 CB CYS 33 -0.362 10.995 -1.669 1.00 0.81 C ATOM 271 SG CYS 33 0.857 9.787 -1.097 1.00 0.81 S ATOM 272 N SER 34 -2.289 12.658 -2.619 1.00 0.26 N ATOM 273 CA SER 34 -3.074 13.850 -2.878 1.00 0.26 C ATOM 274 C SER 34 -3.251 14.061 -4.375 1.00 0.26 C ATOM 275 O SER 34 -4.263 13.662 -4.945 1.00 0.26 O ATOM 276 CB SER 34 -2.414 15.075 -2.242 1.00 0.26 C ATOM 277 OG SER 34 -3.187 16.241 -2.459 1.00 0.26 O ATOM 278 N ASP 35 -2.263 14.693 -5.014 1.00 0.11 N ATOM 279 CA ASP 35 -2.326 14.972 -6.435 1.00 0.11 C ATOM 280 C ASP 35 -1.739 13.872 -7.309 1.00 0.11 C ATOM 281 O ASP 35 -2.320 13.510 -8.329 1.00 0.11 O ATOM 282 CB ASP 35 -1.605 16.283 -6.756 1.00 0.11 C ATOM 283 CG ASP 35 -2.313 17.493 -6.179 1.00 0.11 C ATOM 284 OD1 ASP 35 -3.489 17.359 -5.780 1.00 0.11 O ATOM 285 OD2 ASP 35 -1.692 18.576 -6.127 1.00 0.11 O ATOM 286 N THR 36 -0.583 13.331 -6.918 1.00 0.16 N ATOM 287 CA THR 36 0.090 12.284 -7.661 1.00 0.16 C ATOM 288 C THR 36 -0.180 10.957 -6.966 1.00 0.16 C ATOM 289 O THR 36 -0.644 10.932 -5.828 1.00 0.16 O ATOM 290 CB THR 36 1.603 12.552 -7.769 1.00 0.16 C ATOM 291 OG1 THR 36 2.193 12.506 -6.464 1.00 0.16 O ATOM 292 CG2 THR 36 1.859 13.925 -8.372 1.00 0.16 C ATOM 293 N LYS 37 0.116 9.859 -7.664 1.00 0.60 N ATOM 294 CA LYS 37 -0.117 8.545 -7.099 1.00 0.60 C ATOM 295 C LYS 37 1.110 7.649 -7.149 1.00 0.60 C ATOM 296 O LYS 37 1.880 7.697 -8.106 1.00 0.60 O ATOM 297 CB LYS 37 -1.273 7.849 -7.822 1.00 0.60 C ATOM 298 CD LYS 37 -3.727 7.760 -8.337 1.00 0.60 C ATOM 299 CE LYS 37 -5.066 8.469 -8.197 1.00 0.60 C ATOM 300 CG LYS 37 -2.615 8.542 -7.657 1.00 0.60 C ATOM 301 NZ LYS 37 -6.168 7.703 -8.842 1.00 0.60 N ATOM 302 N TYR 38 1.283 6.832 -6.107 1.00 0.44 N ATOM 303 CA TYR 38 2.432 5.959 -5.969 1.00 0.44 C ATOM 304 C TYR 38 1.987 4.504 -5.951 1.00 0.44 C ATOM 305 O TYR 38 0.794 4.217 -5.884 1.00 0.44 O ATOM 306 CB TYR 38 3.213 6.299 -4.698 1.00 0.44 C ATOM 307 CG TYR 38 3.805 7.690 -4.696 1.00 0.44 C ATOM 308 OH TYR 38 5.420 11.522 -4.684 1.00 0.44 O ATOM 309 CZ TYR 38 4.887 10.253 -4.688 1.00 0.44 C ATOM 310 CD1 TYR 38 3.067 8.777 -4.244 1.00 0.44 C ATOM 311 CE1 TYR 38 3.601 10.051 -4.238 1.00 0.44 C ATOM 312 CD2 TYR 38 5.101 7.912 -5.147 1.00 0.44 C ATOM 313 CE2 TYR 38 5.650 9.180 -5.148 1.00 0.44 C ATOM 314 N THR 39 2.971 3.603 -6.013 1.00 0.23 N ATOM 315 CA THR 39 2.658 2.189 -6.053 1.00 0.23 C ATOM 316 C THR 39 3.290 1.504 -4.849 1.00 0.23 C ATOM 317 O THR 39 4.337 1.930 -4.369 1.00 0.23 O ATOM 318 CB THR 39 3.147 1.539 -7.360 1.00 0.23 C ATOM 319 OG1 THR 39 4.571 1.660 -7.454 1.00 0.23 O ATOM 320 CG2 THR 39 2.521 2.227 -8.564 1.00 0.23 C ATOM 321 N LEU 40 2.642 0.439 -4.370 1.00 0.32 N ATOM 322 CA LEU 40 3.164 -0.308 -3.243 1.00 0.32 C ATOM 323 C LEU 40 3.213 -1.791 -3.582 1.00 0.32 C ATOM 324 O LEU 40 2.463 -2.263 -4.434 1.00 0.32 O ATOM 325 CB LEU 40 2.309 -0.066 -1.997 1.00 0.32 C ATOM 326 CG LEU 40 2.726 -0.819 -0.732 1.00 0.32 C ATOM 327 CD1 LEU 40 4.088 -0.346 -0.249 1.00 0.32 C ATOM 328 CD2 LEU 40 1.686 -0.646 0.364 1.00 0.32 C ATOM 329 N CYS 41 4.106 -2.518 -2.906 1.00 0.00 N ATOM 330 CA CYS 41 4.272 -3.941 -3.127 1.00 0.00 C ATOM 331 C CYS 41 3.956 -4.615 -1.800 1.00 0.00 C ATOM 332 O CYS 41 4.085 -4.002 -0.743 1.00 0.00 O ATOM 333 CB CYS 41 5.688 -4.245 -3.621 1.00 0.00 C ATOM 334 SG CYS 41 6.119 -3.449 -5.186 1.00 0.00 S TER END