####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS149_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS149_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 2.02 2.02 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 2 - 41 1.95 2.02 LCS_AVERAGE: 96.07 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 18 - 41 0.97 2.66 LCS_AVERAGE: 45.21 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 15 41 3 3 3 7 13 23 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 13 40 41 8 16 23 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 13 40 41 9 16 24 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 13 40 41 9 16 24 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 13 40 41 9 16 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 13 40 41 9 16 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 13 40 41 9 16 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 13 40 41 9 16 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 13 40 41 9 17 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 13 40 41 9 13 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 13 40 41 7 12 23 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 13 40 41 9 13 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 13 40 41 4 5 23 30 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 13 40 41 4 13 23 27 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 3 40 41 3 3 3 4 6 15 24 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 3 40 41 3 3 4 5 9 15 15 24 34 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 6 40 41 4 16 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 24 40 41 8 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 24 40 41 3 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 24 40 41 8 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 24 40 41 3 12 22 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 24 40 41 3 13 23 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 24 40 41 6 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 24 40 41 4 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 24 40 41 6 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 24 40 41 7 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 24 40 41 7 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 24 40 41 7 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 24 40 41 8 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 24 40 41 8 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 24 40 41 8 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 24 40 41 8 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 24 40 41 8 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 24 40 41 4 18 23 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 24 40 41 4 7 20 27 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 24 40 41 7 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 24 40 41 4 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 24 40 41 8 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 24 40 41 4 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 24 40 41 7 18 26 32 36 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 24 40 41 7 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 80.43 ( 45.21 96.07 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 18 26 32 37 38 38 40 40 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 21.95 43.90 63.41 78.05 90.24 92.68 92.68 97.56 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.31 0.67 1.03 1.27 1.54 1.55 1.55 1.79 1.79 2.02 2.02 2.02 2.02 2.02 2.02 2.02 2.02 2.02 2.02 2.02 GDT RMS_ALL_AT 2.88 2.66 2.17 2.07 2.06 2.06 2.06 2.03 2.03 2.02 2.02 2.02 2.02 2.02 2.02 2.02 2.02 2.02 2.02 2.02 # Checking swapping # possible swapping detected: F 15 F 15 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 3.779 0 0.487 0.575 4.576 10.000 8.788 4.576 LGA Q 2 Q 2 2.018 0 0.254 0.860 7.573 47.727 23.232 7.297 LGA E 3 E 3 1.635 0 0.088 1.118 6.091 58.182 40.404 3.399 LGA T 4 T 4 1.586 0 0.038 1.039 4.084 58.182 46.753 2.265 LGA R 5 R 5 1.102 0 0.055 0.914 4.726 73.636 56.364 4.726 LGA K 6 K 6 0.729 0 0.038 1.265 3.314 81.818 58.990 1.675 LGA K 7 K 7 1.228 0 0.052 0.291 4.342 65.455 43.838 4.342 LGA C 8 C 8 0.752 0 0.040 0.683 2.058 86.364 77.576 2.058 LGA T 9 T 9 0.584 0 0.049 0.103 0.987 86.364 84.416 0.582 LGA E 10 E 10 1.208 0 0.050 0.318 2.334 65.909 57.778 2.334 LGA M 11 M 11 1.858 0 0.308 1.028 2.662 61.818 47.273 2.352 LGA K 12 K 12 1.106 0 0.101 0.981 7.155 61.818 33.737 7.155 LGA K 13 K 13 2.661 0 0.580 0.900 9.557 52.727 24.646 8.811 LGA K 14 K 14 2.691 0 0.638 0.943 9.470 27.727 13.535 9.470 LGA F 15 F 15 4.566 0 0.500 1.351 10.849 5.000 1.818 10.718 LGA K 16 K 16 6.430 0 0.710 1.422 12.731 0.909 0.404 12.731 LGA N 17 N 17 1.373 0 0.647 0.613 3.979 46.818 39.091 2.319 LGA C 18 C 18 0.776 0 0.084 0.825 3.170 86.364 74.242 3.170 LGA E 19 E 19 1.636 0 0.268 0.733 2.857 61.818 46.263 2.528 LGA V 20 V 20 1.339 0 0.086 1.190 3.870 54.545 51.688 0.971 LGA R 21 R 21 2.219 0 0.151 1.406 10.855 55.455 22.810 10.855 LGA C 22 C 22 2.297 0 0.062 0.898 5.282 44.545 31.515 5.282 LGA D 23 D 23 1.600 0 0.208 1.162 3.471 39.545 36.364 2.198 LGA E 24 E 24 1.744 0 0.061 1.123 4.012 50.909 39.596 3.174 LGA S 25 S 25 1.652 0 0.149 0.684 2.603 50.909 46.970 2.603 LGA N 26 N 26 1.725 0 0.583 0.823 6.043 42.727 26.364 6.042 LGA H 27 H 27 1.633 0 0.370 0.732 3.035 45.000 44.545 2.064 LGA C 28 C 28 1.055 0 0.139 0.157 1.775 69.545 65.758 1.775 LGA V 29 V 29 0.965 0 0.080 0.091 1.768 77.727 68.312 1.591 LGA E 30 E 30 1.028 0 0.062 0.677 5.213 77.727 45.657 3.192 LGA V 31 V 31 1.041 0 0.025 1.123 3.124 69.545 61.299 3.124 LGA R 32 R 32 1.140 0 0.196 0.911 2.334 61.818 61.818 1.893 LGA C 33 C 33 1.217 0 0.481 0.830 2.901 55.909 56.667 1.185 LGA S 34 S 34 2.185 0 0.550 0.789 5.761 26.818 32.727 1.640 LGA D 35 D 35 2.748 0 0.249 1.005 4.027 27.727 28.182 2.970 LGA T 36 T 36 0.893 0 0.184 0.961 3.678 82.273 67.273 3.678 LGA K 37 K 37 0.792 0 0.054 0.799 2.478 74.091 59.798 1.856 LGA Y 38 Y 38 0.508 0 0.054 1.221 9.503 81.818 36.970 9.503 LGA T 39 T 39 0.916 0 0.213 1.010 3.327 81.818 64.156 2.380 LGA L 40 L 40 1.921 0 0.146 0.905 4.819 47.727 31.591 4.819 LGA C 41 C 41 1.527 1 0.464 0.788 3.758 47.727 36.104 3.758 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 2.017 2.052 3.516 56.208 43.788 25.499 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 40 1.79 79.878 88.567 2.118 LGA_LOCAL RMSD: 1.789 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.032 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 2.017 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.462347 * X + -0.644120 * Y + -0.609380 * Z + 80.597542 Y_new = -0.856484 * X + 0.502291 * Y + 0.118903 * Z + 48.474232 Z_new = 0.229498 * X + 0.576900 * Y + -0.783912 * Z + -34.603451 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.065790 -0.231562 2.507161 [DEG: -118.3610 -13.2675 143.6497 ] ZXZ: -1.763497 2.471738 0.378620 [DEG: -101.0409 141.6201 21.6933 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS149_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS149_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 40 1.79 88.567 2.02 REMARK ---------------------------------------------------------- MOLECULE T0955TS149_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT 5njl_a ATOM 1 N SER 1 0.404 -11.436 -2.433 1.00 3.74 N ATOM 2 CA SER 1 -0.657 -11.604 -1.413 1.00 3.74 C ATOM 3 C SER 1 -0.104 -11.285 -0.070 1.00 3.74 C ATOM 4 O SER 1 -0.292 -10.192 0.459 1.00 3.74 O ATOM 5 CB SER 1 -1.142 -13.062 -1.387 1.00 3.74 C ATOM 6 OG SER 1 -1.723 -13.394 -2.638 1.00 3.74 O ATOM 7 N GLN 2 0.597 -12.269 0.514 1.00 3.90 N ATOM 8 CA GLN 2 1.226 -12.094 1.783 1.00 3.90 C ATOM 9 C GLN 2 2.262 -11.037 1.603 1.00 3.90 C ATOM 10 O GLN 2 2.445 -10.171 2.458 1.00 3.90 O ATOM 11 CB GLN 2 1.862 -13.413 2.270 1.00 3.90 C ATOM 12 CG GLN 2 2.900 -14.009 1.313 1.00 3.90 C ATOM 13 CD GLN 2 3.042 -15.493 1.652 1.00 3.90 C ATOM 14 OE1 GLN 2 3.122 -15.877 2.818 1.00 3.90 O ATOM 15 NE2 GLN 2 3.043 -16.359 0.604 1.00 3.90 N ATOM 16 N GLU 3 2.964 -11.085 0.458 1.00 3.33 N ATOM 17 CA GLU 3 3.974 -10.117 0.160 1.00 3.33 C ATOM 18 C GLU 3 3.355 -8.768 -0.037 1.00 3.33 C ATOM 19 O GLU 3 3.834 -7.776 0.509 1.00 3.33 O ATOM 20 CB GLU 3 4.750 -10.476 -1.118 1.00 3.33 C ATOM 21 CG GLU 3 3.846 -10.725 -2.328 1.00 3.33 C ATOM 22 CD GLU 3 4.708 -11.256 -3.464 1.00 3.33 C ATOM 23 OE1 GLU 3 5.797 -10.670 -3.704 1.00 3.33 O ATOM 24 OE2 GLU 3 4.292 -12.260 -4.102 1.00 3.33 O ATOM 25 N THR 4 2.259 -8.703 -0.821 1.00 3.10 N ATOM 26 CA THR 4 1.622 -7.452 -1.131 1.00 3.10 C ATOM 27 C THR 4 1.046 -6.869 0.114 1.00 3.10 C ATOM 28 O THR 4 1.138 -5.665 0.353 1.00 3.10 O ATOM 29 CB THR 4 0.506 -7.587 -2.134 1.00 3.10 C ATOM 30 OG1 THR 4 -0.526 -8.425 -1.631 1.00 3.10 O ATOM 31 CG2 THR 4 1.091 -8.167 -3.436 1.00 3.10 C ATOM 32 N ARG 5 0.438 -7.725 0.951 1.00 2.02 N ATOM 33 CA ARG 5 -0.199 -7.250 2.138 1.00 2.02 C ATOM 34 C ARG 5 0.838 -6.629 3.014 1.00 2.02 C ATOM 35 O ARG 5 0.605 -5.589 3.625 1.00 2.02 O ATOM 36 CB ARG 5 -0.896 -8.368 2.939 1.00 2.02 C ATOM 37 CG ARG 5 -2.121 -8.953 2.223 1.00 2.02 C ATOM 38 CD ARG 5 -3.039 -9.807 3.103 1.00 2.02 C ATOM 39 NE ARG 5 -2.422 -11.151 3.272 1.00 2.02 N ATOM 40 CZ ARG 5 -3.174 -12.181 3.754 1.00 2.02 C ATOM 41 NH1 ARG 5 -4.468 -11.964 4.132 1.00 2.02 N ATOM 42 NH2 ARG 5 -2.632 -13.429 3.864 1.00 2.02 N ATOM 43 N LYS 6 2.025 -7.253 3.105 1.00 1.92 N ATOM 44 CA LYS 6 3.032 -6.726 3.978 1.00 1.92 C ATOM 45 C LYS 6 3.464 -5.383 3.498 1.00 1.92 C ATOM 46 O LYS 6 3.653 -4.465 4.286 1.00 1.92 O ATOM 47 CB LYS 6 4.298 -7.591 4.062 1.00 1.92 C ATOM 48 CG LYS 6 4.079 -8.930 4.761 1.00 1.92 C ATOM 49 CD LYS 6 5.255 -9.892 4.603 1.00 1.92 C ATOM 50 CE LYS 6 5.653 -10.139 3.148 1.00 1.92 C ATOM 51 NZ LYS 6 6.598 -9.094 2.698 1.00 1.92 N ATOM 52 N LYS 7 3.619 -5.223 2.173 1.00 1.67 N ATOM 53 CA LYS 7 4.138 -3.982 1.681 1.00 1.67 C ATOM 54 C LYS 7 3.230 -2.855 2.055 1.00 1.67 C ATOM 55 O LYS 7 3.710 -1.792 2.446 1.00 1.67 O ATOM 56 CB LYS 7 4.341 -3.944 0.154 1.00 1.67 C ATOM 57 CG LYS 7 4.931 -2.616 -0.337 1.00 1.67 C ATOM 58 CD LYS 7 5.568 -2.692 -1.730 1.00 1.67 C ATOM 59 CE LYS 7 7.091 -2.863 -1.693 1.00 1.67 C ATOM 60 NZ LYS 7 7.653 -2.888 -3.063 1.00 1.67 N ATOM 61 N CYS 8 1.897 -3.034 1.963 1.00 1.55 N ATOM 62 CA CYS 8 1.042 -1.922 2.270 1.00 1.55 C ATOM 63 C CYS 8 1.216 -1.552 3.712 1.00 1.55 C ATOM 64 O CYS 8 1.276 -0.373 4.056 1.00 1.55 O ATOM 65 CB CYS 8 -0.455 -2.173 1.980 1.00 1.55 C ATOM 66 SG CYS 8 -1.208 -3.456 3.022 1.00 1.55 S ATOM 67 N THR 9 1.317 -2.558 4.600 1.00 1.73 N ATOM 68 CA THR 9 1.489 -2.304 6.003 1.00 1.73 C ATOM 69 C THR 9 2.808 -1.625 6.174 1.00 1.73 C ATOM 70 O THR 9 2.958 -0.675 6.939 1.00 1.73 O ATOM 71 CB THR 9 1.559 -3.568 6.809 1.00 1.73 C ATOM 72 OG1 THR 9 0.374 -4.332 6.637 1.00 1.73 O ATOM 73 CG2 THR 9 1.761 -3.194 8.288 1.00 1.73 C ATOM 74 N GLU 10 3.804 -2.112 5.415 1.00 1.87 N ATOM 75 CA GLU 10 5.169 -1.689 5.475 1.00 1.87 C ATOM 76 C GLU 10 5.259 -0.235 5.151 1.00 1.87 C ATOM 77 O GLU 10 5.904 0.527 5.870 1.00 1.87 O ATOM 78 CB GLU 10 6.029 -2.458 4.451 1.00 1.87 C ATOM 79 CG GLU 10 7.529 -2.189 4.551 1.00 1.87 C ATOM 80 CD GLU 10 8.200 -3.061 3.501 1.00 1.87 C ATOM 81 OE1 GLU 10 7.753 -4.226 3.322 1.00 1.87 O ATOM 82 OE2 GLU 10 9.175 -2.580 2.869 1.00 1.87 O ATOM 83 N MET 11 4.596 0.207 4.067 1.00 1.93 N ATOM 84 CA MET 11 4.727 1.603 3.805 1.00 1.93 C ATOM 85 C MET 11 3.552 2.274 4.416 1.00 1.93 C ATOM 86 O MET 11 3.054 3.277 3.907 1.00 1.93 O ATOM 87 CB MET 11 4.769 1.971 2.312 1.00 1.93 C ATOM 88 CG MET 11 3.458 1.738 1.564 1.00 1.93 C ATOM 89 SD MET 11 3.408 2.519 -0.076 1.00 1.93 S ATOM 90 CE MET 11 4.812 1.591 -0.762 1.00 1.93 C ATOM 91 N LYS 12 3.101 1.747 5.564 1.00 2.32 N ATOM 92 CA LYS 12 2.029 2.381 6.257 1.00 2.32 C ATOM 93 C LYS 12 2.598 3.697 6.641 1.00 2.32 C ATOM 94 O LYS 12 1.943 4.737 6.572 1.00 2.32 O ATOM 95 CB LYS 12 1.629 1.644 7.555 1.00 2.32 C ATOM 96 CG LYS 12 2.732 1.635 8.623 1.00 2.32 C ATOM 97 CD LYS 12 2.262 1.256 10.030 1.00 2.32 C ATOM 98 CE LYS 12 2.838 -0.065 10.543 1.00 2.32 C ATOM 99 NZ LYS 12 4.301 0.064 10.729 1.00 2.32 N ATOM 100 N LYS 13 3.880 3.665 7.038 1.00 3.16 N ATOM 101 CA LYS 13 4.517 4.867 7.450 1.00 3.16 C ATOM 102 C LYS 13 5.424 5.248 6.329 1.00 3.16 C ATOM 103 O LYS 13 6.560 4.783 6.243 1.00 3.16 O ATOM 104 CB LYS 13 5.347 4.643 8.720 1.00 3.16 C ATOM 105 CG LYS 13 5.546 5.881 9.587 1.00 3.16 C ATOM 106 CD LYS 13 5.925 5.471 11.008 1.00 3.16 C ATOM 107 CE LYS 13 5.934 6.604 12.029 1.00 3.16 C ATOM 108 NZ LYS 13 6.221 6.049 13.370 1.00 3.16 N ATOM 109 N LYS 14 4.928 6.122 5.433 1.00 3.16 N ATOM 110 CA LYS 14 5.709 6.533 4.306 1.00 3.16 C ATOM 111 C LYS 14 6.046 7.977 4.492 1.00 3.16 C ATOM 112 O LYS 14 5.540 8.633 5.401 1.00 3.16 O ATOM 113 CB LYS 14 4.982 6.407 2.958 1.00 3.16 C ATOM 114 CG LYS 14 5.921 6.637 1.774 1.00 3.16 C ATOM 115 CD LYS 14 5.315 6.314 0.410 1.00 3.16 C ATOM 116 CE LYS 14 6.266 6.607 -0.753 1.00 3.16 C ATOM 117 NZ LYS 14 5.557 6.453 -2.044 1.00 3.16 N ATOM 118 N PHE 15 6.949 8.498 3.634 1.00 3.38 N ATOM 119 CA PHE 15 7.423 9.848 3.749 1.00 3.38 C ATOM 120 C PHE 15 6.327 10.847 3.543 1.00 3.38 C ATOM 121 O PHE 15 6.103 11.699 4.401 1.00 3.38 O ATOM 122 CB PHE 15 8.513 10.184 2.726 1.00 3.38 C ATOM 123 CG PHE 15 8.952 11.576 3.013 1.00 3.38 C ATOM 124 CD1 PHE 15 9.859 11.815 4.019 1.00 3.38 C ATOM 125 CD2 PHE 15 8.470 12.640 2.283 1.00 3.38 C ATOM 126 CE1 PHE 15 10.281 13.093 4.301 1.00 3.38 C ATOM 127 CE2 PHE 15 8.889 13.921 2.563 1.00 3.38 C ATOM 128 CZ PHE 15 9.798 14.150 3.569 1.00 3.38 C ATOM 129 N LYS 16 5.595 10.784 2.411 1.00 2.00 N ATOM 130 CA LYS 16 4.558 11.762 2.277 1.00 2.00 C ATOM 131 C LYS 16 3.322 11.100 2.755 1.00 2.00 C ATOM 132 O LYS 16 3.246 9.872 2.817 1.00 2.00 O ATOM 133 CB LYS 16 4.290 12.292 0.856 1.00 2.00 C ATOM 134 CG LYS 16 3.322 13.481 0.863 1.00 2.00 C ATOM 135 CD LYS 16 3.242 14.212 -0.476 1.00 2.00 C ATOM 136 CE LYS 16 4.609 14.600 -1.043 1.00 2.00 C ATOM 137 NZ LYS 16 5.311 15.515 -0.120 1.00 2.00 N ATOM 138 N ASN 17 2.318 11.897 3.150 1.00 1.57 N ATOM 139 CA ASN 17 1.152 11.262 3.673 1.00 1.57 C ATOM 140 C ASN 17 0.452 10.595 2.543 1.00 1.57 C ATOM 141 O ASN 17 0.172 11.204 1.512 1.00 1.57 O ATOM 142 CB ASN 17 0.189 12.230 4.378 1.00 1.57 C ATOM 143 CG ASN 17 0.816 12.622 5.717 1.00 1.57 C ATOM 144 OD1 ASN 17 1.112 11.774 6.556 1.00 1.57 O ATOM 145 ND2 ASN 17 1.025 13.948 5.934 1.00 1.57 N ATOM 146 N CYS 18 0.164 9.294 2.714 1.00 1.46 N ATOM 147 CA CYS 18 -0.511 8.557 1.693 1.00 1.46 C ATOM 148 C CYS 18 -1.226 7.425 2.359 1.00 1.46 C ATOM 149 O CYS 18 -1.024 7.152 3.541 1.00 1.46 O ATOM 150 CB CYS 18 0.434 7.959 0.632 1.00 1.46 C ATOM 151 SG CYS 18 1.592 6.756 1.350 1.00 1.46 S ATOM 152 N GLU 19 -2.116 6.755 1.604 1.00 1.09 N ATOM 153 CA GLU 19 -2.854 5.632 2.099 1.00 1.09 C ATOM 154 C GLU 19 -2.449 4.470 1.254 1.00 1.09 C ATOM 155 O GLU 19 -2.356 4.583 0.035 1.00 1.09 O ATOM 156 CB GLU 19 -4.369 5.813 1.928 1.00 1.09 C ATOM 157 CG GLU 19 -4.902 6.990 2.739 1.00 1.09 C ATOM 158 CD GLU 19 -6.277 7.329 2.205 1.00 1.09 C ATOM 159 OE1 GLU 19 -7.091 6.383 2.038 1.00 1.09 O ATOM 160 OE2 GLU 19 -6.534 8.537 1.956 1.00 1.09 O ATOM 161 N VAL 20 -2.157 3.319 1.883 1.00 0.86 N ATOM 162 CA VAL 20 -1.796 2.182 1.094 1.00 0.86 C ATOM 163 C VAL 20 -2.543 1.005 1.614 1.00 0.86 C ATOM 164 O VAL 20 -2.523 0.707 2.806 1.00 0.86 O ATOM 165 CB VAL 20 -0.331 1.862 1.155 1.00 0.86 C ATOM 166 CG1 VAL 20 0.079 1.809 2.632 1.00 0.86 C ATOM 167 CG2 VAL 20 -0.072 0.535 0.421 1.00 0.86 C ATOM 168 N ARG 21 -3.241 0.301 0.711 1.00 1.01 N ATOM 169 CA ARG 21 -3.928 -0.862 1.165 1.00 1.01 C ATOM 170 C ARG 21 -3.865 -1.853 0.063 1.00 1.01 C ATOM 171 O ARG 21 -3.669 -1.493 -1.097 1.00 1.01 O ATOM 172 CB ARG 21 -5.413 -0.637 1.473 1.00 1.01 C ATOM 173 CG ARG 21 -5.645 0.398 2.574 1.00 1.01 C ATOM 174 CD ARG 21 -6.842 0.076 3.466 1.00 1.01 C ATOM 175 NE ARG 21 -6.382 -0.965 4.432 1.00 1.01 N ATOM 176 CZ ARG 21 -5.848 -0.595 5.633 1.00 1.01 C ATOM 177 NH1 ARG 21 -5.838 0.724 5.994 1.00 1.01 N ATOM 178 NH2 ARG 21 -5.324 -1.533 6.475 1.00 1.01 N ATOM 179 N CYS 22 -4.003 -3.149 0.390 1.00 1.22 N ATOM 180 CA CYS 22 -3.993 -4.057 -0.711 1.00 1.22 C ATOM 181 C CYS 22 -5.408 -4.466 -0.921 1.00 1.22 C ATOM 182 O CYS 22 -6.139 -4.723 0.035 1.00 1.22 O ATOM 183 CB CYS 22 -3.172 -5.348 -0.520 1.00 1.22 C ATOM 184 SG CYS 22 -4.012 -6.584 0.516 1.00 1.22 S ATOM 185 N ASP 23 -5.843 -4.503 -2.193 1.00 1.94 N ATOM 186 CA ASP 23 -7.183 -4.937 -2.453 1.00 1.94 C ATOM 187 C ASP 23 -7.160 -6.411 -2.676 1.00 1.94 C ATOM 188 O ASP 23 -6.441 -6.933 -3.528 1.00 1.94 O ATOM 189 CB ASP 23 -7.890 -4.224 -3.622 1.00 1.94 C ATOM 190 CG ASP 23 -7.115 -4.354 -4.924 1.00 1.94 C ATOM 191 OD1 ASP 23 -5.961 -4.866 -4.905 1.00 1.94 O ATOM 192 OD2 ASP 23 -7.672 -3.914 -5.963 1.00 1.94 O ATOM 193 N GLU 24 -7.965 -7.126 -1.874 1.00 2.21 N ATOM 194 CA GLU 24 -7.981 -8.557 -1.892 1.00 2.21 C ATOM 195 C GLU 24 -8.490 -9.038 -3.217 1.00 2.21 C ATOM 196 O GLU 24 -8.011 -10.038 -3.752 1.00 2.21 O ATOM 197 CB GLU 24 -8.897 -9.149 -0.801 1.00 2.21 C ATOM 198 CG GLU 24 -10.397 -9.029 -1.097 1.00 2.21 C ATOM 199 CD GLU 24 -10.806 -10.299 -1.829 1.00 2.21 C ATOM 200 OE1 GLU 24 -9.895 -11.125 -2.098 1.00 2.21 O ATOM 201 OE2 GLU 24 -12.022 -10.476 -2.106 1.00 2.21 O ATOM 202 N SER 25 -9.485 -8.333 -3.785 1.00 2.40 N ATOM 203 CA SER 25 -10.104 -8.824 -4.980 1.00 2.40 C ATOM 204 C SER 25 -9.078 -8.999 -6.052 1.00 2.40 C ATOM 205 O SER 25 -8.737 -10.125 -6.409 1.00 2.40 O ATOM 206 CB SER 25 -11.210 -7.895 -5.509 1.00 2.40 C ATOM 207 OG SER 25 -11.875 -8.514 -6.599 1.00 2.40 O ATOM 208 N ASN 26 -8.536 -7.893 -6.589 1.00 2.23 N ATOM 209 CA ASN 26 -7.521 -8.067 -7.584 1.00 2.23 C ATOM 210 C ASN 26 -6.264 -7.719 -6.896 1.00 2.23 C ATOM 211 O ASN 26 -5.944 -6.536 -6.815 1.00 2.23 O ATOM 212 CB ASN 26 -7.640 -7.107 -8.776 1.00 2.23 C ATOM 213 CG ASN 26 -8.905 -7.476 -9.531 1.00 2.23 C ATOM 214 OD1 ASN 26 -9.769 -6.630 -9.760 1.00 2.23 O ATOM 215 ND2 ASN 26 -9.018 -8.772 -9.927 1.00 2.23 N ATOM 216 N HIS 27 -5.506 -8.746 -6.461 1.00 1.57 N ATOM 217 CA HIS 27 -4.364 -8.576 -5.613 1.00 1.57 C ATOM 218 C HIS 27 -3.482 -7.509 -6.168 1.00 1.57 C ATOM 219 O HIS 27 -2.746 -7.716 -7.129 1.00 1.57 O ATOM 220 CB HIS 27 -3.534 -9.861 -5.518 1.00 1.57 C ATOM 221 CG HIS 27 -4.433 -11.055 -5.502 1.00 1.57 C ATOM 222 ND1 HIS 27 -5.376 -11.312 -4.531 1.00 1.57 N ATOM 223 CD2 HIS 27 -4.568 -12.051 -6.421 1.00 1.57 C ATOM 224 CE1 HIS 27 -6.033 -12.433 -4.909 1.00 1.57 C ATOM 225 NE2 HIS 27 -5.580 -12.919 -6.052 1.00 1.57 N ATOM 226 N CYS 28 -3.538 -6.326 -5.533 1.00 1.49 N ATOM 227 CA CYS 28 -2.739 -5.219 -5.948 1.00 1.49 C ATOM 228 C CYS 28 -2.492 -4.385 -4.735 1.00 1.49 C ATOM 229 O CYS 28 -3.282 -4.386 -3.793 1.00 1.49 O ATOM 230 CB CYS 28 -3.432 -4.297 -6.970 1.00 1.49 C ATOM 231 SG CYS 28 -3.542 -5.028 -8.632 1.00 1.49 S ATOM 232 N VAL 29 -1.346 -3.672 -4.732 1.00 1.11 N ATOM 233 CA VAL 29 -1.078 -2.749 -3.678 1.00 1.11 C ATOM 234 C VAL 29 -1.353 -1.418 -4.279 1.00 1.11 C ATOM 235 O VAL 29 -0.709 -1.035 -5.256 1.00 1.11 O ATOM 236 CB VAL 29 0.350 -2.731 -3.221 1.00 1.11 C ATOM 237 CG1 VAL 29 0.517 -1.567 -2.228 1.00 1.11 C ATOM 238 CG2 VAL 29 0.707 -4.118 -2.656 1.00 1.11 C ATOM 239 N GLU 30 -2.325 -0.682 -3.709 1.00 1.08 N ATOM 240 CA GLU 30 -2.698 0.573 -4.288 1.00 1.08 C ATOM 241 C GLU 30 -2.234 1.636 -3.364 1.00 1.08 C ATOM 242 O GLU 30 -2.495 1.589 -2.165 1.00 1.08 O ATOM 243 CB GLU 30 -4.218 0.764 -4.388 1.00 1.08 C ATOM 244 CG GLU 30 -4.919 -0.217 -5.325 1.00 1.08 C ATOM 245 CD GLU 30 -6.414 -0.036 -5.118 1.00 1.08 C ATOM 246 OE1 GLU 30 -6.828 1.095 -4.747 1.00 1.08 O ATOM 247 OE2 GLU 30 -7.159 -1.033 -5.322 1.00 1.08 O ATOM 248 N VAL 31 -1.526 2.644 -3.902 1.00 1.02 N ATOM 249 CA VAL 31 -1.123 3.660 -2.988 1.00 1.02 C ATOM 250 C VAL 31 -1.665 4.966 -3.466 1.00 1.02 C ATOM 251 O VAL 31 -1.542 5.326 -4.636 1.00 1.02 O ATOM 252 CB VAL 31 0.364 3.787 -2.829 1.00 1.02 C ATOM 253 CG1 VAL 31 0.974 4.202 -4.177 1.00 1.02 C ATOM 254 CG2 VAL 31 0.639 4.785 -1.691 1.00 1.02 C ATOM 255 N ARG 32 -2.304 5.701 -2.538 1.00 1.44 N ATOM 256 CA ARG 32 -2.858 6.989 -2.832 1.00 1.44 C ATOM 257 C ARG 32 -2.068 7.939 -2.000 1.00 1.44 C ATOM 258 O ARG 32 -2.005 7.802 -0.782 1.00 1.44 O ATOM 259 CB ARG 32 -4.341 7.115 -2.418 1.00 1.44 C ATOM 260 CG ARG 32 -5.018 8.443 -2.774 1.00 1.44 C ATOM 261 CD ARG 32 -6.529 8.402 -2.533 1.00 1.44 C ATOM 262 NE ARG 32 -7.081 7.465 -3.548 1.00 1.44 N ATOM 263 CZ ARG 32 -7.744 7.954 -4.638 1.00 1.44 C ATOM 264 NH1 ARG 32 -8.141 9.259 -4.669 1.00 1.44 N ATOM 265 NH2 ARG 32 -8.000 7.124 -5.688 1.00 1.44 N ATOM 266 N CYS 33 -1.423 8.933 -2.632 1.00 1.54 N ATOM 267 CA CYS 33 -0.607 9.807 -1.848 1.00 1.54 C ATOM 268 C CYS 33 -0.769 11.172 -2.402 1.00 1.54 C ATOM 269 O CYS 33 -1.395 11.366 -3.447 1.00 1.54 O ATOM 270 CB CYS 33 0.888 9.445 -1.929 1.00 1.54 C ATOM 271 SG CYS 33 1.956 10.413 -0.820 1.00 1.54 S ATOM 272 N SER 34 -0.243 12.167 -1.672 1.00 1.71 N ATOM 273 CA SER 34 -0.275 13.490 -2.183 1.00 1.71 C ATOM 274 C SER 34 0.828 13.564 -3.172 1.00 1.71 C ATOM 275 O SER 34 1.937 13.087 -2.931 1.00 1.71 O ATOM 276 CB SER 34 -0.025 14.573 -1.123 1.00 1.71 C ATOM 277 OG SER 34 -0.117 15.868 -1.706 1.00 1.71 O ATOM 278 N ASP 35 0.510 14.161 -4.330 1.00 1.67 N ATOM 279 CA ASP 35 1.448 14.388 -5.386 1.00 1.67 C ATOM 280 C ASP 35 1.999 13.101 -5.942 1.00 1.67 C ATOM 281 O ASP 35 3.041 13.121 -6.595 1.00 1.67 O ATOM 282 CB ASP 35 2.630 15.253 -4.925 1.00 1.67 C ATOM 283 CG ASP 35 2.065 16.643 -4.693 1.00 1.67 C ATOM 284 OD1 ASP 35 1.421 17.189 -5.629 1.00 1.67 O ATOM 285 OD2 ASP 35 2.240 17.164 -3.559 1.00 1.67 O ATOM 286 N THR 36 1.347 11.941 -5.716 1.00 1.78 N ATOM 287 CA THR 36 1.807 10.718 -6.340 1.00 1.78 C ATOM 288 C THR 36 0.662 9.745 -6.449 1.00 1.78 C ATOM 289 O THR 36 -0.385 9.916 -5.824 1.00 1.78 O ATOM 290 CB THR 36 2.934 9.993 -5.631 1.00 1.78 C ATOM 291 OG1 THR 36 2.564 9.704 -4.292 1.00 1.78 O ATOM 292 CG2 THR 36 4.227 10.827 -5.669 1.00 1.78 C ATOM 293 N LYS 37 0.842 8.704 -7.301 1.00 1.73 N ATOM 294 CA LYS 37 -0.088 7.617 -7.468 1.00 1.73 C ATOM 295 C LYS 37 0.734 6.431 -7.849 1.00 1.73 C ATOM 296 O LYS 37 1.504 6.485 -8.808 1.00 1.73 O ATOM 297 CB LYS 37 -1.112 7.835 -8.607 1.00 1.73 C ATOM 298 CG LYS 37 -2.188 6.744 -8.752 1.00 1.73 C ATOM 299 CD LYS 37 -1.655 5.376 -9.191 1.00 1.73 C ATOM 300 CE LYS 37 -2.653 4.221 -9.076 1.00 1.73 C ATOM 301 NZ LYS 37 -2.944 3.662 -10.416 1.00 1.73 N ATOM 302 N TYR 38 0.618 5.318 -7.099 1.00 1.66 N ATOM 303 CA TYR 38 1.384 4.198 -7.546 1.00 1.66 C ATOM 304 C TYR 38 0.565 2.962 -7.330 1.00 1.66 C ATOM 305 O TYR 38 -0.125 2.827 -6.321 1.00 1.66 O ATOM 306 CB TYR 38 2.718 4.054 -6.793 1.00 1.66 C ATOM 307 CG TYR 38 3.629 3.148 -7.557 1.00 1.66 C ATOM 308 CD1 TYR 38 4.301 3.606 -8.669 1.00 1.66 C ATOM 309 CD2 TYR 38 3.842 1.848 -7.153 1.00 1.66 C ATOM 310 CE1 TYR 38 5.148 2.779 -9.371 1.00 1.66 C ATOM 311 CE2 TYR 38 4.686 1.014 -7.849 1.00 1.66 C ATOM 312 CZ TYR 38 5.344 1.484 -8.963 1.00 1.66 C ATOM 313 OH TYR 38 6.214 0.647 -9.689 1.00 1.66 O ATOM 314 N THR 39 0.608 2.028 -8.296 1.00 2.44 N ATOM 315 CA THR 39 -0.107 0.801 -8.120 1.00 2.44 C ATOM 316 C THR 39 0.907 -0.280 -8.260 1.00 2.44 C ATOM 317 O THR 39 1.887 -0.126 -8.987 1.00 2.44 O ATOM 318 CB THR 39 -1.184 0.569 -9.134 1.00 2.44 C ATOM 319 OG1 THR 39 -1.955 -0.567 -8.770 1.00 2.44 O ATOM 320 CG2 THR 39 -0.538 0.369 -10.516 1.00 2.44 C ATOM 321 N LEU 40 0.722 -1.394 -7.528 1.00 3.41 N ATOM 322 CA LEU 40 1.709 -2.426 -7.603 1.00 3.41 C ATOM 323 C LEU 40 1.014 -3.751 -7.656 1.00 3.41 C ATOM 324 O LEU 40 0.027 -3.973 -6.951 1.00 3.41 O ATOM 325 CB LEU 40 2.629 -2.443 -6.369 1.00 3.41 C ATOM 326 CG LEU 40 3.719 -3.525 -6.422 1.00 3.41 C ATOM 327 CD1 LEU 40 4.718 -3.232 -7.554 1.00 3.41 C ATOM 328 CD2 LEU 40 4.378 -3.720 -5.046 1.00 3.41 C ATOM 329 N CYS 41 1.496 -4.669 -8.515 1.00 3.88 N ATOM 330 CA CYS 41 0.924 -5.983 -8.529 1.00 3.88 C ATOM 331 C CYS 41 2.102 -6.931 -8.319 1.00 3.88 C ATOM 332 O CYS 41 3.249 -6.420 -8.214 1.00 3.88 O ATOM 333 CB CYS 41 0.235 -6.374 -9.850 1.00 3.88 C ATOM 334 SG CYS 41 -0.575 -8.002 -9.748 1.00 3.88 S TER 335 CYS 41 END