####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS085_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS085_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 12 - 38 5.00 13.13 LONGEST_CONTINUOUS_SEGMENT: 27 15 - 41 4.93 13.88 LCS_AVERAGE: 63.30 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 1 - 19 1.98 11.04 LCS_AVERAGE: 33.91 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.82 11.12 LCS_AVERAGE: 20.40 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 19 22 3 3 4 12 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 30 LCS_GDT Q 2 Q 2 15 19 22 7 13 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 30 LCS_GDT E 3 E 3 15 19 22 10 14 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 30 LCS_GDT T 4 T 4 15 19 22 10 14 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 30 LCS_GDT R 5 R 5 15 19 22 10 14 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 30 LCS_GDT K 6 K 6 15 19 24 10 14 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 30 LCS_GDT K 7 K 7 15 19 24 10 14 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 30 LCS_GDT C 8 C 8 15 19 24 10 14 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT T 9 T 9 15 19 24 10 14 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT E 10 E 10 15 19 24 10 14 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT M 11 M 11 15 19 24 10 14 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT K 12 K 12 15 19 27 10 14 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT K 13 K 13 15 19 27 9 14 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT K 14 K 14 15 19 27 9 14 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT F 15 F 15 15 19 27 9 14 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT K 16 K 16 15 19 27 3 8 14 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT N 17 N 17 3 19 27 3 3 4 6 9 19 21 22 23 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT C 18 C 18 5 19 27 3 4 7 15 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT E 19 E 19 5 19 27 3 5 7 10 14 19 21 22 23 24 25 26 26 27 27 28 29 29 29 30 LCS_GDT V 20 V 20 5 12 27 3 5 7 9 13 13 17 19 21 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT R 21 R 21 5 12 27 3 5 7 9 13 13 17 19 21 21 23 24 25 26 26 28 28 28 29 32 LCS_GDT C 22 C 22 5 12 27 3 5 6 9 13 13 17 19 21 21 23 24 25 26 26 28 28 28 29 32 LCS_GDT D 23 D 23 4 12 27 3 4 7 9 13 13 17 19 21 21 23 24 25 26 26 28 28 28 29 32 LCS_GDT E 24 E 24 4 12 27 3 4 7 9 13 13 17 19 21 21 23 24 25 26 26 28 28 28 29 32 LCS_GDT S 25 S 25 4 12 27 3 4 7 9 13 13 17 19 21 21 23 24 25 26 26 28 28 28 29 32 LCS_GDT N 26 N 26 4 12 27 1 4 7 9 11 13 17 19 21 21 23 24 25 26 26 28 28 28 29 32 LCS_GDT H 27 H 27 4 12 27 3 3 7 9 13 13 17 19 21 21 23 24 25 26 26 28 28 28 29 32 LCS_GDT C 28 C 28 4 12 27 3 3 7 9 13 13 15 16 20 21 23 24 25 26 26 28 28 28 29 32 LCS_GDT V 29 V 29 5 12 27 3 5 7 9 13 13 15 19 21 23 24 26 26 27 27 28 29 29 29 32 LCS_GDT E 30 E 30 5 9 27 3 4 7 12 14 19 21 22 23 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT V 31 V 31 5 9 27 3 14 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT R 32 R 32 5 9 27 3 4 7 9 11 19 21 21 22 24 25 25 26 27 27 28 29 29 29 32 LCS_GDT C 33 C 33 5 9 27 3 4 6 9 11 13 17 19 21 21 23 24 25 26 26 28 28 28 29 32 LCS_GDT S 34 S 34 5 9 27 3 4 7 9 10 13 17 19 21 21 23 24 25 26 26 28 28 28 29 32 LCS_GDT D 35 D 35 4 7 27 3 4 7 9 11 13 17 19 21 21 23 24 25 26 26 28 28 28 29 32 LCS_GDT T 36 T 36 4 7 27 3 3 7 9 9 13 17 19 21 21 23 24 25 26 26 28 28 28 29 32 LCS_GDT K 37 K 37 5 6 27 3 4 5 7 9 12 16 19 21 21 23 24 25 26 27 28 29 29 29 32 LCS_GDT Y 38 Y 38 5 6 27 3 3 5 6 9 12 17 19 21 21 24 25 25 26 27 28 29 29 29 32 LCS_GDT T 39 T 39 5 6 27 3 8 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT L 40 L 40 5 6 27 3 4 6 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 32 LCS_GDT C 41 C 41 5 6 27 3 4 5 6 13 14 19 21 23 24 25 26 26 27 27 28 29 29 29 30 LCS_AVERAGE LCS_A: 39.20 ( 20.40 33.91 63.30 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 14 15 17 19 20 21 22 23 24 25 26 26 27 27 28 29 29 29 32 GDT PERCENT_AT 24.39 34.15 36.59 41.46 46.34 48.78 51.22 53.66 56.10 58.54 60.98 63.41 63.41 65.85 65.85 68.29 70.73 70.73 70.73 78.05 GDT RMS_LOCAL 0.32 0.58 0.64 1.04 1.34 1.51 1.80 1.98 2.17 2.39 2.68 3.04 2.94 3.24 3.22 3.53 3.88 3.88 3.88 6.35 GDT RMS_ALL_AT 11.22 11.12 11.17 11.20 11.20 11.22 11.10 11.08 11.07 11.14 10.97 10.79 10.93 10.83 11.08 10.96 11.10 11.10 11.10 11.81 # Checking swapping # possible swapping detected: D 23 D 23 # possible swapping detected: D 35 D 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 2.404 0 0.221 0.614 4.239 23.182 22.727 4.209 LGA Q 2 Q 2 1.875 0 0.245 1.000 3.254 58.182 42.424 2.555 LGA E 3 E 3 1.414 0 0.072 1.154 6.988 61.818 35.556 4.521 LGA T 4 T 4 1.406 0 0.051 1.084 3.930 65.455 51.688 3.930 LGA R 5 R 5 0.928 0 0.027 1.366 6.282 77.727 49.256 6.282 LGA K 6 K 6 0.439 0 0.025 0.656 4.102 95.455 61.010 3.913 LGA K 7 K 7 0.851 0 0.050 0.666 3.176 81.818 51.717 3.089 LGA C 8 C 8 1.190 0 0.065 0.752 4.416 69.545 55.758 4.416 LGA T 9 T 9 0.891 0 0.057 0.143 0.965 81.818 81.818 0.904 LGA E 10 E 10 0.409 0 0.018 0.647 2.871 95.455 64.848 2.694 LGA M 11 M 11 0.312 0 0.078 0.914 2.794 90.909 79.545 2.794 LGA K 12 K 12 1.586 0 0.092 0.131 2.766 54.545 47.071 2.766 LGA K 13 K 13 2.053 0 0.080 0.573 3.498 44.545 35.354 2.308 LGA K 14 K 14 1.253 0 0.114 0.636 3.895 73.636 51.111 2.214 LGA F 15 F 15 0.413 0 0.273 0.207 0.848 90.909 91.736 0.685 LGA K 16 K 16 0.983 0 0.124 1.281 7.009 58.182 33.939 7.009 LGA N 17 N 17 4.974 0 0.125 1.002 10.002 7.273 3.636 9.991 LGA C 18 C 18 3.528 0 0.433 1.142 6.724 37.273 24.848 6.724 LGA E 19 E 19 3.978 0 0.242 0.820 12.581 11.364 5.051 11.398 LGA V 20 V 20 6.402 0 0.081 0.176 10.911 0.000 0.000 8.863 LGA R 21 R 21 12.399 0 0.169 1.172 21.864 0.000 0.000 20.357 LGA C 22 C 22 16.397 0 0.079 0.906 18.740 0.000 0.000 18.381 LGA D 23 D 23 21.871 0 0.131 1.114 23.311 0.000 0.000 22.368 LGA E 24 E 24 26.921 0 0.441 1.135 32.400 0.000 0.000 31.376 LGA S 25 S 25 28.171 0 0.256 0.253 30.104 0.000 0.000 30.104 LGA N 26 N 26 22.011 0 0.324 1.101 24.179 0.000 0.000 22.375 LGA H 27 H 27 19.593 0 0.585 0.804 24.110 0.000 0.000 24.110 LGA C 28 C 28 13.158 0 0.237 0.647 15.364 0.000 0.000 14.517 LGA V 29 V 29 8.300 0 0.187 1.129 10.176 0.000 0.000 7.010 LGA E 30 E 30 4.103 0 0.240 0.724 5.786 10.909 10.707 3.708 LGA V 31 V 31 2.098 0 0.593 1.379 5.778 31.364 37.922 2.493 LGA R 32 R 32 5.879 0 0.162 1.094 9.123 0.455 1.818 5.145 LGA C 33 C 33 12.513 0 0.422 0.449 15.668 0.000 0.000 11.241 LGA S 34 S 34 16.788 0 0.133 0.728 19.047 0.000 0.000 17.415 LGA D 35 D 35 19.602 0 0.069 0.905 25.389 0.000 0.000 22.762 LGA T 36 T 36 17.142 0 0.624 0.662 21.426 0.000 0.000 21.426 LGA K 37 K 37 10.045 0 0.499 1.465 12.697 0.000 0.000 12.305 LGA Y 38 Y 38 7.550 0 0.169 0.966 15.432 0.000 0.000 15.432 LGA T 39 T 39 2.029 0 0.126 1.014 3.919 29.545 38.182 1.110 LGA L 40 L 40 2.328 0 0.143 1.020 4.306 33.636 29.091 4.306 LGA C 41 C 41 6.641 0 0.384 1.207 9.615 0.455 0.260 7.928 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 9.629 9.474 10.412 31.353 24.563 12.727 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 22 1.98 49.390 46.688 1.059 LGA_LOCAL RMSD: 1.977 Number of atoms: 22 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.081 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 9.629 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.547304 * X + 0.622949 * Y + 0.558921 * Z + 8.244504 Y_new = 0.659048 * X + -0.732412 * Y + 0.170965 * Z + 6.165530 Z_new = 0.515863 * X + 0.274786 * Y + -0.811405 * Z + 6.384945 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.877764 -0.542014 2.815061 [DEG: 50.2922 -31.0551 161.2911 ] ZXZ: 1.867642 2.517349 1.081353 [DEG: 107.0080 144.2335 61.9570 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS085_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS085_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 22 1.98 46.688 9.63 REMARK ---------------------------------------------------------- MOLECULE T0955TS085_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 N SER 1 -2.013 -12.547 -0.981 1.00 0.00 ATOM 5 CA SER 1 -1.541 -13.352 0.142 1.00 0.00 ATOM 7 CB SER 1 -0.491 -14.360 -0.328 1.00 0.00 ATOM 10 OG SER 1 0.679 -13.680 -0.753 1.00 0.00 ATOM 12 C SER 1 -0.957 -12.470 1.241 1.00 0.00 ATOM 13 O SER 1 -1.136 -11.254 1.215 1.00 0.00 ATOM 15 N GLN 2 -0.295 -13.178 2.116 1.00 0.00 ATOM 17 CA GLN 2 0.394 -12.499 3.103 1.00 0.00 ATOM 19 CB GLN 2 0.966 -13.531 4.078 1.00 0.00 ATOM 22 CG GLN 2 1.737 -12.862 5.217 1.00 0.00 ATOM 25 CD GLN 2 0.817 -11.993 6.066 1.00 0.00 ATOM 26 OE1 GLN 2 -0.231 -12.436 6.514 1.00 0.00 ATOM 27 NE2 GLN 2 1.186 -10.752 6.300 1.00 0.00 ATOM 30 C GLN 2 1.443 -11.626 2.634 1.00 0.00 ATOM 31 O GLN 2 1.613 -10.529 3.160 1.00 0.00 ATOM 32 N GLU 3 2.240 -12.073 1.567 1.00 0.00 ATOM 34 CA GLU 3 3.244 -11.241 1.078 1.00 0.00 ATOM 36 CB GLU 3 4.025 -12.028 0.022 1.00 0.00 ATOM 39 CG GLU 3 5.208 -11.221 -0.515 1.00 0.00 ATOM 42 CD GLU 3 5.985 -12.019 -1.557 1.00 0.00 ATOM 43 OE1 GLU 3 6.965 -11.488 -2.085 1.00 0.00 ATOM 44 OE2 GLU 3 5.592 -13.162 -1.819 1.00 0.00 ATOM 45 C GLU 3 2.792 -9.921 0.511 1.00 0.00 ATOM 46 O GLU 3 3.419 -8.894 0.763 1.00 0.00 ATOM 47 N THR 4 1.646 -9.950 -0.288 1.00 0.00 ATOM 49 CA THR 4 1.095 -8.686 -0.783 1.00 0.00 ATOM 51 CB THR 4 -0.096 -8.976 -1.718 1.00 0.00 ATOM 53 CG2 THR 4 -0.711 -7.684 -2.251 1.00 0.00 ATOM 57 OG1 THR 4 0.356 -9.754 -2.819 1.00 0.00 ATOM 59 C THR 4 0.684 -7.800 0.255 1.00 0.00 ATOM 60 O THR 4 0.942 -6.600 0.178 1.00 0.00 ATOM 61 N ARG 5 0.028 -8.434 1.260 1.00 0.00 ATOM 63 CA ARG 5 -0.421 -7.591 2.374 1.00 0.00 ATOM 65 CB ARG 5 -1.297 -8.423 3.315 1.00 0.00 ATOM 68 CG ARG 5 -2.647 -8.757 2.679 1.00 0.00 ATOM 71 CD ARG 5 -3.451 -7.485 2.415 1.00 0.00 ATOM 74 NE ARG 5 -4.745 -7.831 1.791 1.00 0.00 ATOM 76 CZ ARG 5 -5.631 -6.913 1.449 1.00 0.00 ATOM 77 NH1 ARG 5 -6.774 -7.265 0.893 1.00 0.00 ATOM 80 NH2 ARG 5 -5.372 -5.640 1.663 1.00 0.00 ATOM 83 C ARG 5 0.723 -6.970 3.145 1.00 0.00 ATOM 84 O ARG 5 0.638 -5.811 3.548 1.00 0.00 ATOM 85 N LYS 6 1.833 -7.793 3.342 1.00 0.00 ATOM 87 CA LYS 6 2.999 -7.294 4.037 1.00 0.00 ATOM 89 CB LYS 6 4.040 -8.402 4.225 1.00 0.00 ATOM 92 CG LYS 6 5.264 -7.899 4.992 1.00 0.00 ATOM 95 CD LYS 6 6.285 -9.022 5.179 1.00 0.00 ATOM 98 CE LYS 6 7.513 -8.515 5.933 1.00 0.00 ATOM 101 NZ LYS 6 8.499 -9.616 6.096 1.00 0.00 ATOM 105 C LYS 6 3.604 -6.129 3.261 1.00 0.00 ATOM 106 O LYS 6 3.983 -5.123 3.855 1.00 0.00 ATOM 107 N LYS 7 3.698 -6.247 1.915 1.00 0.00 ATOM 109 CA LYS 7 4.225 -5.184 1.081 1.00 0.00 ATOM 111 CB LYS 7 4.324 -5.671 -0.368 1.00 0.00 ATOM 114 CG LYS 7 5.417 -6.727 -0.533 1.00 0.00 ATOM 117 CD LYS 7 5.484 -7.214 -1.981 1.00 0.00 ATOM 120 CE LYS 7 6.586 -8.259 -2.147 1.00 0.00 ATOM 123 NZ LYS 7 6.628 -8.731 -3.557 1.00 0.00 ATOM 127 C LYS 7 3.390 -3.922 1.152 1.00 0.00 ATOM 128 O LYS 7 3.937 -2.825 1.241 1.00 0.00 ATOM 129 N CYS 8 2.018 -4.062 1.118 1.00 0.00 ATOM 131 CA CYS 8 1.119 -2.934 1.243 1.00 0.00 ATOM 133 CB CYS 8 -0.330 -3.357 0.995 1.00 0.00 ATOM 136 SG CYS 8 -0.624 -3.784 -0.739 1.00 0.00 ATOM 138 C CYS 8 1.244 -2.362 2.553 1.00 0.00 ATOM 139 O CYS 8 1.197 -1.143 2.699 1.00 0.00 ATOM 140 N THR 9 1.426 -3.190 3.647 1.00 0.00 ATOM 142 CA THR 9 1.692 -2.623 4.980 1.00 0.00 ATOM 144 CB THR 9 1.736 -3.785 5.991 1.00 0.00 ATOM 146 CG2 THR 9 2.021 -3.280 7.404 1.00 0.00 ATOM 150 OG1 THR 9 0.482 -4.452 5.989 1.00 0.00 ATOM 152 C THR 9 2.874 -1.832 5.103 1.00 0.00 ATOM 153 O THR 9 2.843 -0.768 5.718 1.00 0.00 ATOM 154 N GLU 10 3.928 -2.342 4.515 1.00 0.00 ATOM 156 CA GLU 10 5.231 -1.575 4.527 1.00 0.00 ATOM 158 CB GLU 10 6.362 -2.387 3.888 1.00 0.00 ATOM 161 CG GLU 10 6.705 -3.622 4.720 1.00 0.00 ATOM 164 CD GLU 10 7.789 -4.454 4.043 1.00 0.00 ATOM 165 OE1 GLU 10 8.173 -5.481 4.610 1.00 0.00 ATOM 166 OE2 GLU 10 8.227 -4.056 2.957 1.00 0.00 ATOM 167 C GLU 10 5.041 -0.230 3.764 1.00 0.00 ATOM 168 O GLU 10 5.516 0.809 4.218 1.00 0.00 ATOM 169 N MET 11 4.319 -0.295 2.592 1.00 0.00 ATOM 171 CA MET 11 4.053 0.872 1.903 1.00 0.00 ATOM 173 CB MET 11 3.424 0.504 0.557 1.00 0.00 ATOM 176 CG MET 11 4.401 -0.272 -0.324 1.00 0.00 ATOM 179 SD MET 11 5.831 0.737 -0.777 1.00 0.00 ATOM 180 CE MET 11 5.081 1.697 -2.107 1.00 0.00 ATOM 184 C MET 11 3.194 1.813 2.614 1.00 0.00 ATOM 185 O MET 11 3.429 3.019 2.567 1.00 0.00 ATOM 186 N LYS 12 2.112 1.261 3.343 1.00 0.00 ATOM 188 CA LYS 12 1.310 2.145 4.117 1.00 0.00 ATOM 190 CB LYS 12 0.124 1.429 4.771 1.00 0.00 ATOM 193 CG LYS 12 -0.889 0.953 3.729 1.00 0.00 ATOM 196 CD LYS 12 -2.094 0.297 4.405 1.00 0.00 ATOM 199 CE LYS 12 -2.800 1.289 5.328 1.00 0.00 ATOM 202 NZ LYS 12 -3.961 0.630 5.986 1.00 0.00 ATOM 206 C LYS 12 2.175 2.734 5.147 1.00 0.00 ATOM 207 O LYS 12 2.104 3.935 5.397 1.00 0.00 ATOM 208 N LYS 13 3.023 2.029 5.804 1.00 0.00 ATOM 210 CA LYS 13 3.753 2.613 6.828 1.00 0.00 ATOM 212 CB LYS 13 4.464 1.456 7.537 1.00 0.00 ATOM 215 CG LYS 13 3.481 0.593 8.328 1.00 0.00 ATOM 218 CD LYS 13 4.209 -0.562 9.018 1.00 0.00 ATOM 221 CE LYS 13 3.228 -1.417 9.818 1.00 0.00 ATOM 224 NZ LYS 13 3.954 -2.526 10.492 1.00 0.00 ATOM 228 C LYS 13 4.690 3.657 6.522 1.00 0.00 ATOM 229 O LYS 13 4.750 4.659 7.232 1.00 0.00 ATOM 230 N LYS 14 5.425 3.349 5.391 1.00 0.00 ATOM 232 CA LYS 14 6.427 4.140 4.851 1.00 0.00 ATOM 234 CB LYS 14 7.452 3.195 4.216 1.00 0.00 ATOM 237 CG LYS 14 8.148 2.332 5.268 1.00 0.00 ATOM 240 CD LYS 14 9.156 1.387 4.614 1.00 0.00 ATOM 243 CE LYS 14 9.861 0.535 5.668 1.00 0.00 ATOM 246 NZ LYS 14 10.846 -0.369 5.016 1.00 0.00 ATOM 250 C LYS 14 6.027 5.143 3.903 1.00 0.00 ATOM 251 O LYS 14 6.794 6.059 3.613 1.00 0.00 ATOM 252 N PHE 15 4.761 5.062 3.330 1.00 0.00 ATOM 254 CA PHE 15 4.125 6.221 2.928 1.00 0.00 ATOM 256 CB PHE 15 3.666 6.089 1.473 1.00 0.00 ATOM 259 CG PHE 15 4.824 5.833 0.534 1.00 0.00 ATOM 260 CD1 PHE 15 4.817 4.721 -0.305 1.00 0.00 ATOM 262 CE1 PHE 15 5.885 4.487 -1.171 1.00 0.00 ATOM 264 CZ PHE 15 6.962 5.364 -1.199 1.00 0.00 ATOM 266 CE2 PHE 15 6.975 6.475 -0.363 1.00 0.00 ATOM 268 CD2 PHE 15 5.906 6.709 0.501 1.00 0.00 ATOM 270 C PHE 15 2.879 6.563 3.862 1.00 0.00 ATOM 271 O PHE 15 1.867 5.867 3.819 1.00 0.00 ATOM 272 N LYS 16 3.034 7.625 4.648 1.00 0.00 ATOM 274 CA LYS 16 3.175 7.744 6.164 1.00 0.00 ATOM 276 CB LYS 16 3.494 9.216 6.441 1.00 0.00 ATOM 279 CG LYS 16 4.843 9.621 5.846 1.00 0.00 ATOM 282 CD LYS 16 5.113 11.108 6.080 1.00 0.00 ATOM 285 CE LYS 16 6.467 11.508 5.497 1.00 0.00 ATOM 288 NZ LYS 16 6.719 12.953 5.743 1.00 0.00 ATOM 292 C LYS 16 2.092 7.305 7.002 1.00 0.00 ATOM 293 O LYS 16 2.325 6.669 8.028 1.00 0.00 ATOM 294 N ASN 17 0.756 7.598 6.645 1.00 0.00 ATOM 296 CA ASN 17 -0.120 6.453 6.829 1.00 0.00 ATOM 298 CB ASN 17 -1.263 6.971 7.706 1.00 0.00 ATOM 301 CG ASN 17 -2.210 5.843 8.104 1.00 0.00 ATOM 302 OD1 ASN 17 -2.188 4.769 7.521 1.00 0.00 ATOM 303 ND2 ASN 17 -3.046 6.069 9.095 1.00 0.00 ATOM 306 C ASN 17 -0.643 5.733 5.715 1.00 0.00 ATOM 307 O ASN 17 -0.572 4.506 5.687 1.00 0.00 ATOM 308 N CYS 18 -1.173 6.364 4.759 1.00 0.00 ATOM 310 CA CYS 18 -1.086 6.175 3.391 1.00 0.00 ATOM 312 CB CYS 18 -2.252 5.253 3.029 1.00 0.00 ATOM 315 SG CYS 18 -2.310 4.900 1.255 1.00 0.00 ATOM 317 C CYS 18 -1.074 7.307 2.524 1.00 0.00 ATOM 318 O CYS 18 -1.946 7.439 1.668 1.00 0.00 ATOM 319 N GLU 19 -0.014 8.149 2.775 1.00 0.00 ATOM 321 CA GLU 19 0.206 9.076 1.705 1.00 0.00 ATOM 323 CB GLU 19 1.350 10.000 2.137 1.00 0.00 ATOM 326 CG GLU 19 0.943 10.878 3.321 1.00 0.00 ATOM 329 CD GLU 19 2.108 11.748 3.780 1.00 0.00 ATOM 330 OE1 GLU 19 3.178 11.655 3.173 1.00 0.00 ATOM 331 OE2 GLU 19 1.920 12.504 4.740 1.00 0.00 ATOM 332 C GLU 19 0.480 8.527 0.417 1.00 0.00 ATOM 333 O GLU 19 1.216 7.548 0.309 1.00 0.00 ATOM 334 N VAL 20 -0.093 9.140 -0.574 1.00 0.00 ATOM 336 CA VAL 20 0.386 8.707 -1.796 1.00 0.00 ATOM 338 CB VAL 20 -0.822 8.596 -2.753 1.00 0.00 ATOM 340 CG1 VAL 20 -0.355 8.253 -4.167 1.00 0.00 ATOM 344 CG2 VAL 20 -1.776 7.502 -2.279 1.00 0.00 ATOM 348 C VAL 20 1.419 9.480 -2.400 1.00 0.00 ATOM 349 O VAL 20 1.158 10.569 -2.907 1.00 0.00 ATOM 350 N ARG 21 2.672 8.811 -2.316 1.00 0.00 ATOM 352 CA ARG 21 3.818 9.396 -2.837 1.00 0.00 ATOM 354 CB ARG 21 5.120 9.067 -2.103 1.00 0.00 ATOM 357 CG ARG 21 6.316 9.785 -2.728 1.00 0.00 ATOM 360 CD ARG 21 7.620 9.339 -2.068 1.00 0.00 ATOM 363 NE ARG 21 8.763 10.036 -2.695 1.00 0.00 ATOM 365 CZ ARG 21 9.310 9.621 -3.823 1.00 0.00 ATOM 366 NH1 ARG 21 10.328 10.272 -4.350 1.00 0.00 ATOM 369 NH2 ARG 21 8.837 8.550 -4.424 1.00 0.00 ATOM 372 C ARG 21 3.836 8.822 -4.147 1.00 0.00 ATOM 373 O ARG 21 4.394 7.745 -4.341 1.00 0.00 ATOM 374 N CYS 22 3.284 9.433 -5.094 1.00 0.00 ATOM 376 CA CYS 22 3.589 9.479 -6.479 1.00 0.00 ATOM 378 CB CYS 22 2.459 8.885 -7.320 1.00 0.00 ATOM 381 SG CYS 22 2.759 9.081 -9.095 1.00 0.00 ATOM 383 C CYS 22 3.815 10.839 -6.856 1.00 0.00 ATOM 384 O CYS 22 3.047 11.720 -6.476 1.00 0.00 ATOM 385 N ASP 23 4.879 11.014 -7.621 1.00 0.00 ATOM 387 CA ASP 23 5.420 12.244 -8.123 1.00 0.00 ATOM 389 CB ASP 23 6.546 12.860 -7.288 1.00 0.00 ATOM 392 CG ASP 23 7.744 11.918 -7.191 1.00 0.00 ATOM 393 OD1 ASP 23 8.355 11.645 -8.229 1.00 0.00 ATOM 394 OD2 ASP 23 7.872 11.540 -5.725 1.00 0.00 ATOM 395 C ASP 23 5.929 11.814 -9.404 1.00 0.00 ATOM 396 O ASP 23 5.800 10.644 -9.757 1.00 0.00 ATOM 397 N GLU 24 6.514 12.680 -10.144 1.00 0.00 ATOM 399 CA GLU 24 6.724 12.620 -11.511 1.00 0.00 ATOM 401 CB GLU 24 5.966 13.681 -12.315 1.00 0.00 ATOM 404 CG GLU 24 4.456 13.445 -12.269 1.00 0.00 ATOM 407 CD GLU 24 3.709 14.540 -13.021 1.00 0.00 ATOM 408 OE1 GLU 24 4.371 15.433 -13.558 1.00 0.00 ATOM 409 OE2 GLU 24 2.474 14.478 -13.055 1.00 0.00 ATOM 410 C GLU 24 8.247 12.842 -11.644 1.00 0.00 ATOM 411 O GLU 24 8.677 13.793 -12.292 1.00 0.00 ATOM 412 N SER 25 8.936 11.891 -10.992 1.00 0.00 ATOM 414 CA SER 25 10.014 11.041 -11.422 1.00 0.00 ATOM 416 CB SER 25 10.781 10.386 -10.271 1.00 0.00 ATOM 419 OG SER 25 11.434 11.379 -9.495 1.00 0.00 ATOM 421 C SER 25 9.297 9.907 -12.318 1.00 0.00 ATOM 422 O SER 25 9.949 8.961 -12.753 1.00 0.00 ATOM 423 N ASN 26 7.941 10.165 -12.505 1.00 0.00 ATOM 425 CA ASN 26 6.987 9.300 -13.016 1.00 0.00 ATOM 427 CB ASN 26 7.273 8.997 -14.490 1.00 0.00 ATOM 430 CG ASN 26 7.145 10.252 -15.346 1.00 0.00 ATOM 431 OD1 ASN 26 6.508 11.220 -14.956 1.00 0.00 ATOM 432 ND2 ASN 26 7.744 10.255 -16.519 1.00 0.00 ATOM 435 C ASN 26 6.935 8.056 -12.247 1.00 0.00 ATOM 436 O ASN 26 6.860 6.976 -12.826 1.00 0.00 ATOM 437 N HIS 27 6.972 8.271 -10.903 1.00 0.00 ATOM 439 CA HIS 27 7.609 7.541 -9.919 1.00 0.00 ATOM 441 CB HIS 27 8.804 8.230 -9.252 1.00 0.00 ATOM 444 CG HIS 27 9.675 7.286 -8.474 1.00 0.00 ATOM 445 ND1 HIS 27 9.656 7.201 -7.099 1.00 0.00 ATOM 446 CE1 HIS 27 10.531 6.282 -6.712 1.00 0.00 ATOM 448 NE2 HIS 27 11.117 5.769 -7.786 1.00 0.00 ATOM 450 CD2 HIS 27 10.596 6.381 -8.897 1.00 0.00 ATOM 452 C HIS 27 6.552 7.376 -8.979 1.00 0.00 ATOM 453 O HIS 27 5.797 8.314 -8.730 1.00 0.00 ATOM 454 N CYS 28 6.521 6.131 -8.444 1.00 0.00 ATOM 456 CA CYS 28 6.045 5.766 -7.169 1.00 0.00 ATOM 458 CB CYS 28 6.530 6.695 -6.055 1.00 0.00 ATOM 461 SG CYS 28 6.562 5.866 -4.447 1.00 0.00 ATOM 463 C CYS 28 4.424 5.833 -7.282 1.00 0.00 ATOM 464 O CYS 28 3.892 6.086 -8.360 1.00 0.00 ATOM 465 N VAL 29 3.763 5.625 -6.231 1.00 0.00 ATOM 467 CA VAL 29 2.694 4.733 -5.989 1.00 0.00 ATOM 469 CB VAL 29 2.736 4.275 -4.514 1.00 0.00 ATOM 471 CG1 VAL 29 4.063 3.586 -4.204 1.00 0.00 ATOM 475 CG2 VAL 29 2.584 5.475 -3.580 1.00 0.00 ATOM 479 C VAL 29 1.369 5.294 -6.308 1.00 0.00 ATOM 480 O VAL 29 1.220 6.511 -6.394 1.00 0.00 ATOM 481 N GLU 30 0.334 4.560 -6.499 1.00 0.00 ATOM 483 CA GLU 30 -0.941 5.060 -5.891 1.00 0.00 ATOM 485 CB GLU 30 -1.896 5.619 -6.950 1.00 0.00 ATOM 488 CG GLU 30 -3.178 6.161 -6.317 1.00 0.00 ATOM 491 CD GLU 30 -4.094 6.771 -7.373 1.00 0.00 ATOM 492 OE1 GLU 30 -3.720 6.749 -8.549 1.00 0.00 ATOM 493 OE2 GLU 30 -5.166 7.258 -6.997 1.00 0.00 ATOM 494 C GLU 30 -1.559 3.980 -5.198 1.00 0.00 ATOM 495 O GLU 30 -2.367 3.258 -5.777 1.00 0.00 ATOM 496 N VAL 31 -1.301 3.744 -3.994 1.00 0.00 ATOM 498 CA VAL 31 -0.820 2.597 -3.381 1.00 0.00 ATOM 500 CB VAL 31 0.255 2.897 -2.313 1.00 0.00 ATOM 502 CG1 VAL 31 -0.341 3.719 -1.171 1.00 0.00 ATOM 506 CG2 VAL 31 0.809 1.595 -1.736 1.00 0.00 ATOM 510 C VAL 31 -2.047 1.865 -2.723 1.00 0.00 ATOM 511 O VAL 31 -1.865 0.900 -1.984 1.00 0.00 ATOM 512 N ARG 32 -3.386 2.285 -2.964 1.00 0.00 ATOM 514 CA ARG 32 -4.122 2.519 -1.818 1.00 0.00 ATOM 516 CB ARG 32 -4.785 3.896 -1.920 1.00 0.00 ATOM 519 CG ARG 32 -5.646 4.198 -0.693 1.00 0.00 ATOM 522 CD ARG 32 -6.060 5.668 -0.672 1.00 0.00 ATOM 525 NE ARG 32 -4.867 6.520 -0.495 1.00 0.00 ATOM 527 CZ ARG 32 -4.943 7.838 -0.432 1.00 0.00 ATOM 528 NH1 ARG 32 -3.853 8.562 -0.273 1.00 0.00 ATOM 531 NH2 ARG 32 -6.114 8.430 -0.529 1.00 0.00 ATOM 534 C ARG 32 -5.226 1.397 -1.541 1.00 0.00 ATOM 535 O ARG 32 -6.021 1.084 -2.424 1.00 0.00 ATOM 536 N CYS 33 -5.156 0.885 -0.254 1.00 0.00 ATOM 538 CA CYS 33 -4.921 -0.571 -0.049 1.00 0.00 ATOM 540 CB CYS 33 -3.997 -0.788 1.151 1.00 0.00 ATOM 543 SG CYS 33 -2.329 -0.158 0.843 1.00 0.00 ATOM 545 C CYS 33 -6.173 -1.289 0.153 1.00 0.00 ATOM 546 O CYS 33 -6.160 -2.447 0.563 1.00 0.00 ATOM 547 N SER 34 -7.302 -0.492 -0.186 1.00 0.00 ATOM 549 CA SER 34 -8.535 -1.056 0.081 1.00 0.00 ATOM 551 CB SER 34 -9.640 -0.059 -0.271 1.00 0.00 ATOM 554 OG SER 34 -9.822 -0.010 -1.678 1.00 0.00 ATOM 556 C SER 34 -8.748 -2.313 -0.643 1.00 0.00 ATOM 557 O SER 34 -9.258 -3.274 -0.072 1.00 0.00 ATOM 558 N ASP 35 -8.353 -2.362 -1.952 1.00 0.00 ATOM 560 CA ASP 35 -7.614 -3.387 -2.576 1.00 0.00 ATOM 562 CB ASP 35 -8.017 -4.758 -2.022 1.00 0.00 ATOM 565 CG ASP 35 -7.074 -5.853 -2.510 1.00 0.00 ATOM 566 OD1 ASP 35 -6.138 -5.529 -3.248 1.00 0.00 ATOM 567 OD2 ASP 35 -7.581 -7.153 -1.910 1.00 0.00 ATOM 568 C ASP 35 -7.808 -3.355 -3.987 1.00 0.00 ATOM 569 O ASP 35 -6.945 -3.804 -4.738 1.00 0.00 ATOM 570 N THR 36 -8.862 -2.858 -4.499 1.00 0.00 ATOM 572 CA THR 36 -8.883 -2.428 -5.918 1.00 0.00 ATOM 574 CB THR 36 -10.317 -2.004 -6.286 1.00 0.00 ATOM 576 CG2 THR 36 -10.403 -1.537 -7.737 1.00 0.00 ATOM 580 OG1 THR 36 -11.190 -3.112 -6.111 1.00 0.00 ATOM 582 C THR 36 -7.964 -1.366 -6.244 1.00 0.00 ATOM 583 O THR 36 -7.376 -1.368 -7.323 1.00 0.00 ATOM 584 N LYS 37 -7.842 -0.469 -5.305 1.00 0.00 ATOM 586 CA LYS 37 -7.591 0.923 -5.401 1.00 0.00 ATOM 588 CB LYS 37 -8.140 1.772 -4.250 1.00 0.00 ATOM 591 CG LYS 37 -9.670 1.791 -4.245 1.00 0.00 ATOM 594 CD LYS 37 -10.195 2.692 -3.127 1.00 0.00 ATOM 597 CE LYS 37 -11.722 2.722 -3.132 1.00 0.00 ATOM 600 NZ LYS 37 -12.216 3.610 -2.047 1.00 0.00 ATOM 604 C LYS 37 -5.983 0.947 -5.390 1.00 0.00 ATOM 605 O LYS 37 -5.383 2.003 -5.208 1.00 0.00 ATOM 606 N TYR 38 -5.345 -0.155 -5.579 1.00 0.00 ATOM 608 CA TYR 38 -4.051 -0.112 -5.088 1.00 0.00 ATOM 610 CB TYR 38 -3.720 -1.147 -4.008 1.00 0.00 ATOM 613 CG TYR 38 -3.626 -2.552 -4.570 1.00 0.00 ATOM 614 CD1 TYR 38 -3.122 -3.594 -3.791 1.00 0.00 ATOM 616 CE1 TYR 38 -3.035 -4.887 -4.309 1.00 0.00 ATOM 618 CZ TYR 38 -3.454 -5.140 -5.611 1.00 0.00 ATOM 619 OH TYR 38 -3.370 -6.412 -6.123 1.00 0.00 ATOM 621 CE2 TYR 38 -3.958 -4.109 -6.396 1.00 0.00 ATOM 623 CD2 TYR 38 -4.043 -2.816 -5.875 1.00 0.00 ATOM 625 C TYR 38 -3.301 -0.392 -6.280 1.00 0.00 ATOM 626 O TYR 38 -3.387 -1.493 -6.817 1.00 0.00 ATOM 627 N THR 39 -2.564 0.580 -6.702 1.00 0.00 ATOM 629 CA THR 39 -1.617 0.439 -7.698 1.00 0.00 ATOM 631 CB THR 39 -2.011 1.382 -8.850 1.00 0.00 ATOM 633 CG2 THR 39 -3.425 1.090 -9.348 1.00 0.00 ATOM 637 OG1 THR 39 -1.958 2.726 -8.391 1.00 0.00 ATOM 639 C THR 39 -0.189 0.680 -7.317 1.00 0.00 ATOM 640 O THR 39 0.303 1.798 -7.445 1.00 0.00 ATOM 641 N LEU 40 0.457 -0.317 -6.874 1.00 0.00 ATOM 643 CA LEU 40 1.461 -0.018 -5.788 1.00 0.00 ATOM 645 CB LEU 40 1.406 -0.942 -4.569 1.00 0.00 ATOM 648 CG LEU 40 2.490 -0.624 -3.532 1.00 0.00 ATOM 650 CD1 LEU 40 2.283 -1.468 -2.277 1.00 0.00 ATOM 654 CD2 LEU 40 3.874 -0.928 -4.105 1.00 0.00 ATOM 658 C LEU 40 2.685 -0.215 -6.497 1.00 0.00 ATOM 659 O LEU 40 2.937 -1.308 -7.001 1.00 0.00 ATOM 660 N CYS 41 3.477 0.913 -6.520 1.00 0.00 ATOM 662 CA CYS 41 4.618 0.808 -7.425 1.00 0.00 ATOM 664 CB CYS 41 4.048 1.144 -8.805 1.00 0.00 ATOM 667 SG CYS 41 3.325 2.803 -8.854 1.00 0.00 ATOM 669 C CYS 41 5.819 1.555 -7.198 1.00 0.00 ATOM 670 O CYS 41 5.894 2.309 -6.211 1.00 0.00 ATOM 671 OXT CYS 41 6.773 1.452 -7.966 1.00 0.00 TER END