####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS047_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS047_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 1 - 39 4.56 6.27 LCS_AVERAGE: 91.91 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 33 3 - 35 1.87 6.88 LONGEST_CONTINUOUS_SEGMENT: 33 4 - 36 1.97 6.81 LCS_AVERAGE: 69.19 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 6 - 24 0.92 6.79 LCS_AVERAGE: 29.33 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 6 39 3 3 4 5 5 7 7 9 10 13 16 19 24 26 31 33 36 37 37 37 LCS_GDT Q 2 Q 2 3 6 39 3 3 4 5 5 8 12 16 25 28 28 31 34 35 35 36 36 37 37 37 LCS_GDT E 3 E 3 3 33 39 3 6 17 22 26 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT T 4 T 4 4 33 39 3 3 4 5 12 26 29 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT R 5 R 5 16 33 39 3 4 7 20 25 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT K 6 K 6 19 33 39 4 20 24 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT K 7 K 7 19 33 39 11 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT C 8 C 8 19 33 39 6 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT T 9 T 9 19 33 39 11 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT E 10 E 10 19 33 39 11 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT M 11 M 11 19 33 39 11 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT K 12 K 12 19 33 39 6 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT K 13 K 13 19 33 39 6 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT K 14 K 14 19 33 39 11 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT F 15 F 15 19 33 39 11 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT K 16 K 16 19 33 39 11 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT N 17 N 17 19 33 39 8 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT C 18 C 18 19 33 39 4 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT E 19 E 19 19 33 39 10 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT V 20 V 20 19 33 39 9 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT R 21 R 21 19 33 39 4 9 24 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT C 22 C 22 19 33 39 11 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT D 23 D 23 19 33 39 10 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT E 24 E 24 19 33 39 3 8 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT S 25 S 25 9 33 39 3 8 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT N 26 N 26 9 33 39 3 10 16 27 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT H 27 H 27 9 33 39 3 17 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT C 28 C 28 9 33 39 4 11 24 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT V 29 V 29 9 33 39 11 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT E 30 E 30 7 33 39 11 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT V 31 V 31 7 33 39 11 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT R 32 R 32 7 33 39 11 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT C 33 C 33 7 33 39 5 19 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT S 34 S 34 3 33 39 3 3 9 21 27 29 30 32 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT D 35 D 35 4 33 39 6 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT T 36 T 36 4 33 39 3 4 4 12 18 25 32 33 33 34 34 34 34 35 35 36 36 37 37 37 LCS_GDT K 37 K 37 4 6 39 3 4 4 6 6 7 7 8 10 11 13 21 34 35 35 36 36 37 37 37 LCS_GDT Y 38 Y 38 4 6 39 3 4 4 6 6 7 7 8 10 11 12 15 18 25 30 35 36 37 37 37 LCS_GDT T 39 T 39 4 6 39 3 4 4 6 6 7 7 8 10 11 11 11 15 18 18 19 20 22 32 37 LCS_GDT L 40 L 40 4 6 12 3 4 4 6 6 7 7 8 10 10 10 11 11 12 16 17 17 19 21 23 LCS_GDT C 41 C 41 3 5 12 3 3 3 5 5 6 7 8 10 11 11 13 15 18 18 19 20 22 23 26 LCS_AVERAGE LCS_A: 63.47 ( 29.33 69.19 91.91 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 20 25 28 29 31 32 33 33 34 34 34 34 35 35 36 36 37 37 37 GDT PERCENT_AT 26.83 48.78 60.98 68.29 70.73 75.61 78.05 80.49 80.49 82.93 82.93 82.93 82.93 85.37 85.37 87.80 87.80 90.24 90.24 90.24 GDT RMS_LOCAL 0.34 0.56 0.95 1.05 1.16 1.52 1.74 1.89 1.87 2.07 2.07 2.07 2.07 2.51 2.51 2.94 2.94 3.50 3.50 3.50 GDT RMS_ALL_AT 6.90 6.85 6.89 6.83 6.87 6.73 6.62 6.64 6.88 6.75 6.75 6.75 6.75 6.64 6.64 6.55 6.55 6.54 6.54 6.54 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: F 15 F 15 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 13.358 0 0.135 0.466 16.366 0.000 0.000 16.366 LGA Q 2 Q 2 9.843 0 0.495 0.746 15.451 0.000 0.000 15.451 LGA E 3 E 3 3.608 0 0.572 1.235 10.385 14.091 6.869 10.385 LGA T 4 T 4 4.429 0 0.430 1.313 8.871 8.182 4.675 8.871 LGA R 5 R 5 3.276 0 0.546 1.540 4.699 17.273 31.901 4.699 LGA K 6 K 6 0.949 0 0.178 1.010 6.173 74.091 47.677 5.941 LGA K 7 K 7 0.713 0 0.109 0.710 1.653 78.182 74.949 1.139 LGA C 8 C 8 1.138 0 0.024 0.033 1.439 65.455 65.455 1.439 LGA T 9 T 9 1.000 0 0.049 1.008 3.359 69.545 63.377 0.928 LGA E 10 E 10 1.045 0 0.095 0.594 3.995 69.545 44.646 3.466 LGA M 11 M 11 0.878 0 0.093 0.921 4.398 81.818 62.273 4.398 LGA K 12 K 12 0.982 0 0.042 0.875 3.824 77.727 54.545 3.824 LGA K 13 K 13 1.192 0 0.038 1.048 1.766 73.636 65.859 1.466 LGA K 14 K 14 1.091 0 0.127 0.727 2.824 69.545 66.667 2.824 LGA F 15 F 15 0.787 0 0.263 0.269 1.823 82.273 67.603 1.823 LGA K 16 K 16 0.630 0 0.083 1.353 5.301 81.818 52.323 4.179 LGA N 17 N 17 0.969 0 0.323 0.950 3.654 74.091 51.818 3.095 LGA C 18 C 18 0.936 0 0.074 0.130 1.597 82.273 74.242 1.597 LGA E 19 E 19 0.341 0 0.054 0.691 3.652 95.455 59.798 3.652 LGA V 20 V 20 0.728 0 0.034 0.066 1.436 78.182 80.000 1.274 LGA R 21 R 21 2.085 0 0.180 1.256 4.281 47.727 33.884 4.281 LGA C 22 C 22 1.648 0 0.164 0.227 2.176 62.273 56.364 2.176 LGA D 23 D 23 1.964 0 0.320 1.224 4.034 41.818 35.909 2.152 LGA E 24 E 24 2.347 0 0.095 0.708 2.934 35.455 36.364 2.934 LGA S 25 S 25 1.572 0 0.601 0.876 3.228 42.727 53.030 0.777 LGA N 26 N 26 2.356 0 0.207 1.294 6.261 51.818 29.318 6.261 LGA H 27 H 27 1.306 0 0.046 0.481 3.298 61.818 44.909 3.298 LGA C 28 C 28 1.856 0 0.130 0.871 4.823 61.818 46.061 4.823 LGA V 29 V 29 0.748 0 0.032 0.985 3.048 77.727 61.818 2.400 LGA E 30 E 30 0.989 0 0.314 0.610 2.958 66.818 50.303 2.866 LGA V 31 V 31 0.809 0 0.089 1.161 2.943 73.636 63.117 2.215 LGA R 32 R 32 1.376 0 0.048 0.714 2.666 59.091 52.066 2.666 LGA C 33 C 33 2.270 0 0.286 0.795 5.517 23.636 30.606 1.828 LGA S 34 S 34 5.683 0 0.398 0.403 9.143 4.091 2.727 9.143 LGA D 35 D 35 0.613 0 0.538 0.887 2.720 65.909 61.136 2.720 LGA T 36 T 36 4.697 0 0.652 1.365 9.265 5.000 2.857 8.816 LGA K 37 K 37 8.611 0 0.228 1.405 12.458 0.000 0.000 12.458 LGA Y 38 Y 38 12.838 0 0.196 1.459 16.798 0.000 0.000 16.798 LGA T 39 T 39 15.408 0 0.487 0.444 17.526 0.000 0.000 11.461 LGA L 40 L 40 21.904 0 0.280 1.116 27.415 0.000 0.000 25.080 LGA C 41 C 41 20.593 0 0.070 0.143 21.337 0.000 0.000 20.426 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 6.111 6.080 6.715 48.160 39.882 23.503 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 33 1.89 71.341 72.720 1.662 LGA_LOCAL RMSD: 1.885 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.635 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 6.111 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.380578 * X + 0.036411 * Y + -0.924032 * Z + -0.103813 Y_new = 0.270002 * X + -0.951310 * Y + -0.148690 * Z + 0.815737 Z_new = -0.884454 * X + -0.306079 * Y + 0.352216 * Z + 1.591981 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.524550 1.085323 -0.715427 [DEG: 144.6461 62.1844 -40.9909 ] ZXZ: -1.411249 1.210858 -1.903962 [DEG: -80.8586 69.3771 -109.0890 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS047_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS047_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 33 1.89 72.720 6.11 REMARK ---------------------------------------------------------- MOLECULE T0955TS047_1 PFRMAT TS TARGET T0955 MODEL 1 REFINED PARENT 5KVN_A ATOM 1 N SER 1 12.843 -9.571 -0.492 1.00 0.00 ATOM 2 CA SER 1 11.592 -9.078 0.070 1.00 0.00 ATOM 3 C SER 1 10.405 -9.788 -0.653 1.00 0.00 ATOM 4 O SER 1 10.071 -9.432 -1.801 1.00 0.00 ATOM 5 CB SER 1 11.514 -7.536 -0.073 1.00 0.00 ATOM 6 OG SER 1 11.255 -6.840 1.153 1.00 0.00 ATOM 7 N GLN 2 9.906 -10.875 -0.054 1.00 0.00 ATOM 8 CA GLN 2 8.751 -11.545 -0.651 1.00 0.00 ATOM 9 C GLN 2 7.521 -10.856 -0.110 1.00 0.00 ATOM 10 O GLN 2 7.088 -11.076 1.051 1.00 0.00 ATOM 11 CB GLN 2 8.707 -13.019 -0.350 1.00 0.00 ATOM 12 CG GLN 2 9.815 -13.790 -0.973 1.00 0.00 ATOM 13 CD GLN 2 9.822 -15.291 -0.659 1.00 0.00 ATOM 14 OE1 GLN 2 10.590 -16.027 -1.267 1.00 0.00 ATOM 15 NE2 GLN 2 9.026 -15.920 0.192 1.00 0.00 ATOM 16 N GLU 3 6.921 -10.018 -0.957 1.00 0.00 ATOM 17 CA GLU 3 5.747 -9.371 -0.498 1.00 0.00 ATOM 18 C GLU 3 4.503 -9.850 -1.259 1.00 0.00 ATOM 19 O GLU 3 4.236 -9.484 -2.407 1.00 0.00 ATOM 20 CB GLU 3 6.036 -7.849 -0.570 1.00 0.00 ATOM 21 CG GLU 3 6.344 -7.219 0.758 1.00 0.00 ATOM 22 CD GLU 3 7.413 -7.879 1.626 1.00 0.00 ATOM 23 OE1 GLU 3 7.057 -8.809 2.344 1.00 0.00 ATOM 24 OE2 GLU 3 8.576 -7.460 1.606 1.00 0.00 ATOM 25 N THR 4 3.877 -10.820 -0.646 1.00 0.00 ATOM 26 CA THR 4 2.588 -11.368 -1.015 1.00 0.00 ATOM 27 C THR 4 1.658 -10.364 -0.381 1.00 0.00 ATOM 28 O THR 4 1.744 -9.207 -0.806 1.00 0.00 ATOM 29 CB THR 4 2.243 -12.827 -0.585 1.00 0.00 ATOM 30 OG1 THR 4 3.264 -13.750 -0.662 1.00 0.00 ATOM 31 CG2 THR 4 1.035 -13.290 -1.514 1.00 0.00 ATOM 32 N ARG 5 0.568 -10.703 0.272 1.00 0.00 ATOM 33 CA ARG 5 -0.176 -9.632 0.909 1.00 0.00 ATOM 34 C ARG 5 0.446 -9.228 2.296 1.00 0.00 ATOM 35 O ARG 5 0.071 -9.731 3.359 1.00 0.00 ATOM 36 CB ARG 5 -1.608 -10.127 1.056 1.00 0.00 ATOM 37 CG ARG 5 -2.418 -9.367 2.143 1.00 0.00 ATOM 38 CD ARG 5 -3.687 -10.018 2.561 1.00 0.00 ATOM 39 NE ARG 5 -4.378 -9.121 3.499 1.00 0.00 ATOM 40 CZ ARG 5 -4.354 -9.334 4.814 1.00 0.00 ATOM 41 NH1 ARG 5 -3.683 -10.399 5.261 1.00 0.00 ATOM 42 NH2 ARG 5 -4.960 -8.535 5.683 1.00 0.00 ATOM 43 N LYS 6 1.660 -8.633 2.194 1.00 0.00 ATOM 44 CA LYS 6 2.462 -8.044 3.302 1.00 0.00 ATOM 45 C LYS 6 2.937 -6.578 3.028 1.00 0.00 ATOM 46 O LYS 6 3.348 -5.935 3.994 1.00 0.00 ATOM 47 CB LYS 6 3.689 -8.964 3.508 1.00 0.00 ATOM 48 CG LYS 6 3.562 -9.884 4.716 1.00 0.00 ATOM 49 CD LYS 6 4.908 -10.318 5.266 1.00 0.00 ATOM 50 CE LYS 6 4.899 -11.736 5.814 1.00 0.00 ATOM 51 NZ LYS 6 6.097 -12.051 6.604 1.00 0.00 ATOM 52 N LYS 7 2.514 -6.020 1.902 1.00 0.00 ATOM 53 CA LYS 7 2.844 -4.734 1.428 1.00 0.00 ATOM 54 C LYS 7 1.846 -3.664 1.973 1.00 0.00 ATOM 55 O LYS 7 2.170 -2.521 1.837 1.00 0.00 ATOM 56 CB LYS 7 2.798 -4.734 -0.122 1.00 0.00 ATOM 57 CG LYS 7 3.884 -5.608 -0.759 1.00 0.00 ATOM 58 CD LYS 7 4.080 -5.365 -2.253 1.00 0.00 ATOM 59 CE LYS 7 5.533 -5.464 -2.700 1.00 0.00 ATOM 60 NZ LYS 7 5.713 -5.216 -4.137 1.00 0.00 ATOM 61 N CYS 8 0.546 -3.984 2.165 1.00 0.00 ATOM 62 CA CYS 8 -0.337 -2.971 2.708 1.00 0.00 ATOM 63 C CYS 8 0.284 -2.280 3.958 1.00 0.00 ATOM 64 O CYS 8 0.282 -1.047 4.010 1.00 0.00 ATOM 65 CB CYS 8 -1.679 -3.566 3.122 1.00 0.00 ATOM 66 SG CYS 8 -2.862 -2.310 3.677 1.00 0.00 ATOM 67 N THR 9 0.591 -3.068 5.002 1.00 0.00 ATOM 68 CA THR 9 1.148 -2.652 6.264 1.00 0.00 ATOM 69 C THR 9 2.561 -2.017 6.082 1.00 0.00 ATOM 70 O THR 9 2.890 -1.065 6.809 1.00 0.00 ATOM 71 CB THR 9 0.965 -3.880 7.227 1.00 0.00 ATOM 72 OG1 THR 9 1.598 -5.090 6.800 1.00 0.00 ATOM 73 CG2 THR 9 -0.567 -4.166 7.460 1.00 0.00 ATOM 74 N GLU 10 3.433 -2.658 5.256 1.00 0.00 ATOM 75 CA GLU 10 4.733 -2.146 4.905 1.00 0.00 ATOM 76 C GLU 10 4.615 -0.805 4.115 1.00 0.00 ATOM 77 O GLU 10 5.585 -0.042 4.210 1.00 0.00 ATOM 78 CB GLU 10 5.485 -3.175 4.110 1.00 0.00 ATOM 79 CG GLU 10 6.078 -4.327 4.829 1.00 0.00 ATOM 80 CD GLU 10 6.498 -5.459 3.929 1.00 0.00 ATOM 81 OE1 GLU 10 7.214 -5.026 2.901 1.00 0.00 ATOM 82 OE2 GLU 10 6.163 -6.631 4.155 1.00 0.00 ATOM 83 N MET 11 3.710 -0.691 3.108 1.00 0.00 ATOM 84 CA MET 11 3.522 0.548 2.359 1.00 0.00 ATOM 85 C MET 11 2.994 1.673 3.266 1.00 0.00 ATOM 86 O MET 11 3.543 2.781 3.159 1.00 0.00 ATOM 87 CB MET 11 2.692 0.459 1.052 1.00 0.00 ATOM 88 CG MET 11 3.157 -0.632 0.146 1.00 0.00 ATOM 89 SD MET 11 2.242 -0.599 -1.370 1.00 0.00 ATOM 90 CE MET 11 3.167 -1.853 -2.271 1.00 0.00 ATOM 91 N LYS 12 1.915 1.504 4.011 1.00 0.00 ATOM 92 CA LYS 12 1.442 2.525 4.947 1.00 0.00 ATOM 93 C LYS 12 2.617 3.038 5.855 1.00 0.00 ATOM 94 O LYS 12 2.530 4.162 6.334 1.00 0.00 ATOM 95 CB LYS 12 0.259 1.976 5.777 1.00 0.00 ATOM 96 CG LYS 12 -0.379 3.107 6.593 1.00 0.00 ATOM 97 CD LYS 12 -1.627 2.619 7.324 1.00 0.00 ATOM 98 CE LYS 12 -2.529 3.716 7.873 1.00 0.00 ATOM 99 NZ LYS 12 -3.787 3.903 7.075 1.00 0.00 ATOM 100 N LYS 13 3.451 2.137 6.417 1.00 0.00 ATOM 101 CA LYS 13 4.624 2.432 7.227 1.00 0.00 ATOM 102 C LYS 13 5.732 3.186 6.425 1.00 0.00 ATOM 103 O LYS 13 6.210 4.190 6.949 1.00 0.00 ATOM 104 CB LYS 13 5.114 1.111 7.873 1.00 0.00 ATOM 105 CG LYS 13 6.358 1.126 8.719 1.00 0.00 ATOM 106 CD LYS 13 6.461 -0.266 9.390 1.00 0.00 ATOM 107 CE LYS 13 6.770 -1.342 8.351 1.00 0.00 ATOM 108 NZ LYS 13 6.027 -2.595 8.707 1.00 0.00 ATOM 109 N LYS 14 6.233 2.674 5.295 1.00 0.00 ATOM 110 CA LYS 14 7.243 3.447 4.524 1.00 0.00 ATOM 111 C LYS 14 6.652 4.894 4.361 1.00 0.00 ATOM 112 O LYS 14 7.360 5.821 4.749 1.00 0.00 ATOM 113 CB LYS 14 7.562 2.872 3.167 1.00 0.00 ATOM 114 CG LYS 14 8.182 1.527 3.164 1.00 0.00 ATOM 115 CD LYS 14 8.588 1.351 1.701 1.00 0.00 ATOM 116 CE LYS 14 9.323 0.036 1.411 1.00 0.00 ATOM 117 NZ LYS 14 9.948 0.004 0.091 1.00 0.00 ATOM 118 N PHE 15 5.503 5.109 3.728 1.00 0.00 ATOM 119 CA PHE 15 4.881 6.439 3.623 1.00 0.00 ATOM 120 C PHE 15 3.628 6.409 4.550 1.00 0.00 ATOM 121 O PHE 15 2.587 5.844 4.190 1.00 0.00 ATOM 122 CB PHE 15 4.554 6.740 2.163 1.00 0.00 ATOM 123 CG PHE 15 5.664 6.679 1.160 1.00 0.00 ATOM 124 CD1 PHE 15 6.480 7.774 0.934 1.00 0.00 ATOM 125 CD2 PHE 15 5.818 5.520 0.407 1.00 0.00 ATOM 126 CE1 PHE 15 7.439 7.700 -0.060 1.00 0.00 ATOM 127 CE2 PHE 15 6.776 5.451 -0.582 1.00 0.00 ATOM 128 CZ PHE 15 7.585 6.547 -0.816 1.00 0.00 ATOM 129 N LYS 16 3.764 6.990 5.752 1.00 0.00 ATOM 130 CA LYS 16 2.698 7.074 6.765 1.00 0.00 ATOM 131 C LYS 16 1.807 8.305 6.486 1.00 0.00 ATOM 132 O LYS 16 0.603 8.194 6.768 1.00 0.00 ATOM 133 CB LYS 16 3.246 7.140 8.192 1.00 0.00 ATOM 134 CG LYS 16 4.452 6.296 8.480 1.00 0.00 ATOM 135 CD LYS 16 4.425 5.831 9.943 1.00 0.00 ATOM 136 CE LYS 16 5.744 5.226 10.388 1.00 0.00 ATOM 137 NZ LYS 16 6.630 6.263 10.994 1.00 0.00 ATOM 138 N ASN 17 2.371 9.502 6.228 1.00 0.00 ATOM 139 CA ASN 17 1.520 10.614 5.874 1.00 0.00 ATOM 140 C ASN 17 1.268 10.559 4.354 1.00 0.00 ATOM 141 O ASN 17 1.178 11.655 3.784 1.00 0.00 ATOM 142 CB ASN 17 2.214 11.891 6.323 1.00 0.00 ATOM 143 CG ASN 17 2.085 12.221 7.777 1.00 0.00 ATOM 144 OD1 ASN 17 2.050 11.266 8.574 1.00 0.00 ATOM 145 ND2 ASN 17 2.074 13.466 8.260 1.00 0.00 ATOM 146 N CYS 18 0.430 9.606 4.010 1.00 0.00 ATOM 147 CA CYS 18 0.018 9.252 2.663 1.00 0.00 ATOM 148 C CYS 18 -1.110 8.198 2.739 1.00 0.00 ATOM 149 O CYS 18 -1.026 7.261 3.532 1.00 0.00 ATOM 150 CB CYS 18 1.182 8.616 1.882 1.00 0.00 ATOM 151 SG CYS 18 2.570 9.751 1.778 1.00 0.00 ATOM 152 N GLU 19 -1.903 8.101 1.658 1.00 0.00 ATOM 153 CA GLU 19 -2.958 7.128 1.609 1.00 0.00 ATOM 154 C GLU 19 -2.554 5.987 0.676 1.00 0.00 ATOM 155 O GLU 19 -2.757 6.070 -0.546 1.00 0.00 ATOM 156 CB GLU 19 -4.275 7.768 1.145 1.00 0.00 ATOM 157 CG GLU 19 -4.781 8.843 2.047 1.00 0.00 ATOM 158 CD GLU 19 -6.194 9.384 1.764 1.00 0.00 ATOM 159 OE1 GLU 19 -6.981 8.747 1.042 1.00 0.00 ATOM 160 OE2 GLU 19 -6.507 10.468 2.275 1.00 0.00 ATOM 161 N VAL 20 -2.100 4.881 1.311 1.00 0.00 ATOM 162 CA VAL 20 -1.718 3.692 0.573 1.00 0.00 ATOM 163 C VAL 20 -2.991 2.874 0.373 1.00 0.00 ATOM 164 O VAL 20 -3.579 2.391 1.360 1.00 0.00 ATOM 165 CB VAL 20 -0.559 2.881 1.231 1.00 0.00 ATOM 166 CG1 VAL 20 -0.137 1.627 0.422 1.00 0.00 ATOM 167 CG2 VAL 20 0.667 3.769 1.570 1.00 0.00 ATOM 168 N ARG 21 -3.507 2.959 -0.846 1.00 0.00 ATOM 169 CA ARG 21 -4.716 2.144 -1.149 1.00 0.00 ATOM 170 C ARG 21 -4.407 0.641 -1.210 1.00 0.00 ATOM 171 O ARG 21 -4.014 0.077 -2.217 1.00 0.00 ATOM 172 CB ARG 21 -5.416 2.582 -2.427 1.00 0.00 ATOM 173 CG ARG 21 -5.916 3.992 -2.489 1.00 0.00 ATOM 174 CD ARG 21 -7.182 3.941 -3.314 1.00 0.00 ATOM 175 NE ARG 21 -6.947 3.108 -4.471 1.00 0.00 ATOM 176 CZ ARG 21 -7.665 2.106 -4.973 1.00 0.00 ATOM 177 NH1 ARG 21 -8.834 1.678 -4.493 1.00 0.00 ATOM 178 NH2 ARG 21 -7.072 1.515 -6.032 1.00 0.00 ATOM 179 N CYS 22 -4.911 -0.042 -0.171 1.00 0.00 ATOM 180 CA CYS 22 -4.773 -1.496 -0.028 1.00 0.00 ATOM 181 C CYS 22 -6.033 -2.228 -0.500 1.00 0.00 ATOM 182 O CYS 22 -7.090 -2.108 0.150 1.00 0.00 ATOM 183 CB CYS 22 -4.551 -1.805 1.450 1.00 0.00 ATOM 184 SG CYS 22 -3.135 -1.006 2.183 1.00 0.00 ATOM 185 N ASP 23 -5.950 -2.904 -1.644 1.00 0.00 ATOM 186 CA ASP 23 -7.071 -3.700 -2.150 1.00 0.00 ATOM 187 C ASP 23 -6.659 -5.164 -1.941 1.00 0.00 ATOM 188 O ASP 23 -5.900 -5.736 -2.770 1.00 0.00 ATOM 189 CB ASP 23 -7.418 -3.299 -3.581 1.00 0.00 ATOM 190 CG ASP 23 -8.427 -4.255 -4.173 1.00 0.00 ATOM 191 OD1 ASP 23 -9.573 -4.247 -3.697 1.00 0.00 ATOM 192 OD2 ASP 23 -8.061 -5.007 -5.087 1.00 0.00 ATOM 193 N GLU 24 -7.152 -5.836 -0.928 1.00 0.00 ATOM 194 CA GLU 24 -6.842 -7.210 -0.568 1.00 0.00 ATOM 195 C GLU 24 -6.922 -8.145 -1.783 1.00 0.00 ATOM 196 O GLU 24 -5.995 -8.950 -1.909 1.00 0.00 ATOM 197 CB GLU 24 -7.832 -7.631 0.540 1.00 0.00 ATOM 198 CG GLU 24 -7.159 -8.727 1.421 1.00 0.00 ATOM 199 CD GLU 24 -8.151 -9.649 2.127 1.00 0.00 ATOM 200 OE1 GLU 24 -7.888 -10.906 2.251 1.00 0.00 ATOM 201 OE2 GLU 24 -9.242 -9.162 2.607 1.00 0.00 ATOM 202 N SER 25 -8.068 -8.265 -2.455 1.00 0.00 ATOM 203 CA SER 25 -8.211 -9.086 -3.650 1.00 0.00 ATOM 204 C SER 25 -7.162 -8.640 -4.680 1.00 0.00 ATOM 205 O SER 25 -7.216 -7.518 -5.220 1.00 0.00 ATOM 206 CB SER 25 -9.643 -8.949 -4.190 1.00 0.00 ATOM 207 OG SER 25 -10.334 -7.707 -4.270 1.00 0.00 ATOM 208 N ASN 26 -6.395 -9.676 -5.134 1.00 0.00 ATOM 209 CA ASN 26 -5.347 -9.581 -6.147 1.00 0.00 ATOM 210 C ASN 26 -4.156 -8.606 -5.764 1.00 0.00 ATOM 211 O ASN 26 -3.441 -8.167 -6.671 1.00 0.00 ATOM 212 CB ASN 26 -5.937 -9.175 -7.498 1.00 0.00 ATOM 213 CG ASN 26 -5.260 -9.916 -8.681 1.00 0.00 ATOM 214 OD1 ASN 26 -4.626 -11.003 -8.570 1.00 0.00 ATOM 215 ND2 ASN 26 -5.437 -9.334 -9.865 1.00 0.00 ATOM 216 N HIS 27 -3.855 -8.371 -4.464 1.00 0.00 ATOM 217 CA HIS 27 -2.695 -7.555 -4.041 1.00 0.00 ATOM 218 C HIS 27 -2.608 -6.157 -4.719 1.00 0.00 ATOM 219 O HIS 27 -1.478 -5.722 -5.032 1.00 0.00 ATOM 220 CB HIS 27 -1.466 -8.324 -4.385 1.00 0.00 ATOM 221 CG HIS 27 -1.274 -9.689 -3.908 1.00 0.00 ATOM 222 ND1 HIS 27 -1.476 -10.179 -2.652 1.00 0.00 ATOM 223 CD2 HIS 27 -1.008 -10.730 -4.735 1.00 0.00 ATOM 224 CE1 HIS 27 -1.352 -11.480 -2.710 1.00 0.00 ATOM 225 NE2 HIS 27 -1.021 -11.831 -3.942 1.00 0.00 ATOM 226 N CYS 28 -3.656 -5.365 -4.814 1.00 0.00 ATOM 227 CA CYS 28 -3.578 -4.073 -5.509 1.00 0.00 ATOM 228 C CYS 28 -3.179 -2.988 -4.476 1.00 0.00 ATOM 229 O CYS 28 -4.033 -2.461 -3.733 1.00 0.00 ATOM 230 CB CYS 28 -4.970 -3.813 -5.984 1.00 0.00 ATOM 231 SG CYS 28 -5.030 -2.205 -6.750 1.00 0.00 ATOM 232 N VAL 29 -1.968 -2.482 -4.581 1.00 0.00 ATOM 233 CA VAL 29 -1.426 -1.493 -3.694 1.00 0.00 ATOM 234 C VAL 29 -1.135 -0.166 -4.434 1.00 0.00 ATOM 235 O VAL 29 -0.220 -0.110 -5.263 1.00 0.00 ATOM 236 CB VAL 29 -0.174 -2.115 -3.100 1.00 0.00 ATOM 237 CG1 VAL 29 -0.460 -3.094 -1.982 1.00 0.00 ATOM 238 CG2 VAL 29 0.787 -2.725 -4.107 1.00 0.00 ATOM 239 N GLU 30 -1.843 0.899 -4.072 1.00 0.00 ATOM 240 CA GLU 30 -1.700 2.235 -4.666 1.00 0.00 ATOM 241 C GLU 30 -1.597 3.341 -3.574 1.00 0.00 ATOM 242 O GLU 30 -2.627 4.017 -3.343 1.00 0.00 ATOM 243 CB GLU 30 -2.845 2.548 -5.630 1.00 0.00 ATOM 244 CG GLU 30 -2.992 1.624 -6.843 1.00 0.00 ATOM 245 CD GLU 30 -4.201 1.843 -7.712 1.00 0.00 ATOM 246 OE1 GLU 30 -4.581 1.097 -8.608 1.00 0.00 ATOM 247 OE2 GLU 30 -4.810 2.909 -7.434 1.00 0.00 ATOM 248 N VAL 31 -0.409 3.950 -3.508 1.00 0.00 ATOM 249 CA VAL 31 -0.074 5.001 -2.541 1.00 0.00 ATOM 250 C VAL 31 -0.196 6.432 -3.121 1.00 0.00 ATOM 251 O VAL 31 0.424 6.720 -4.168 1.00 0.00 ATOM 252 CB VAL 31 1.398 4.810 -2.027 1.00 0.00 ATOM 253 CG1 VAL 31 2.538 4.861 -3.059 1.00 0.00 ATOM 254 CG2 VAL 31 1.723 5.842 -0.918 1.00 0.00 ATOM 255 N ARG 32 -1.021 7.322 -2.532 1.00 0.00 ATOM 256 CA ARG 32 -1.156 8.661 -2.992 1.00 0.00 ATOM 257 C ARG 32 -0.352 9.742 -2.229 1.00 0.00 ATOM 258 O ARG 32 -0.780 10.207 -1.140 1.00 0.00 ATOM 259 CB ARG 32 -2.610 9.126 -3.120 1.00 0.00 ATOM 260 CG ARG 32 -3.362 8.455 -4.247 1.00 0.00 ATOM 261 CD ARG 32 -4.758 9.094 -4.292 1.00 0.00 ATOM 262 NE ARG 32 -5.431 8.316 -5.330 1.00 0.00 ATOM 263 CZ ARG 32 -6.250 7.277 -5.142 1.00 0.00 ATOM 264 NH1 ARG 32 -6.766 6.951 -3.954 1.00 0.00 ATOM 265 NH2 ARG 32 -6.465 6.545 -6.242 1.00 0.00 ATOM 266 N CYS 33 0.870 9.991 -2.699 1.00 0.00 ATOM 267 CA CYS 33 1.790 11.091 -2.263 1.00 0.00 ATOM 268 C CYS 33 2.464 11.816 -3.469 1.00 0.00 ATOM 269 O CYS 33 2.949 12.933 -3.253 1.00 0.00 ATOM 270 CB CYS 33 2.915 10.414 -1.479 1.00 0.00 ATOM 271 SG CYS 33 3.753 9.000 -2.249 1.00 0.00 ATOM 272 N SER 34 2.059 11.490 -4.683 1.00 0.00 ATOM 273 CA SER 34 2.623 11.985 -5.884 1.00 0.00 ATOM 274 C SER 34 1.687 12.883 -6.714 1.00 0.00 ATOM 275 O SER 34 2.094 13.171 -7.854 1.00 0.00 ATOM 276 CB SER 34 2.867 10.720 -6.761 1.00 0.00 ATOM 277 OG SER 34 3.592 9.671 -6.224 1.00 0.00 ATOM 278 N ASP 35 0.586 13.423 -6.184 1.00 0.00 ATOM 279 CA ASP 35 -0.192 14.328 -7.041 1.00 0.00 ATOM 280 C ASP 35 -0.710 13.645 -8.366 1.00 0.00 ATOM 281 O ASP 35 -0.043 13.640 -9.416 1.00 0.00 ATOM 282 CB ASP 35 0.624 15.639 -7.228 1.00 0.00 ATOM 283 CG ASP 35 0.941 16.331 -5.887 1.00 0.00 ATOM 284 OD1 ASP 35 0.309 16.151 -4.842 1.00 0.00 ATOM 285 OD2 ASP 35 1.898 17.207 -5.844 1.00 0.00 ATOM 286 N THR 36 -1.886 13.025 -8.181 1.00 0.00 ATOM 287 CA THR 36 -2.631 12.196 -9.162 1.00 0.00 ATOM 288 C THR 36 -2.618 12.687 -10.616 1.00 0.00 ATOM 289 O THR 36 -2.508 11.794 -11.486 1.00 0.00 ATOM 290 CB THR 36 -4.003 11.956 -8.557 1.00 0.00 ATOM 291 OG1 THR 36 -4.772 10.904 -9.188 1.00 0.00 ATOM 292 CG2 THR 36 -4.918 13.176 -8.369 1.00 0.00 ATOM 293 N LYS 37 -2.737 13.991 -10.961 1.00 0.00 ATOM 294 CA LYS 37 -2.745 14.399 -12.351 1.00 0.00 ATOM 295 C LYS 37 -3.876 13.665 -13.157 1.00 0.00 ATOM 296 O LYS 37 -3.541 12.726 -13.900 1.00 0.00 ATOM 297 CB LYS 37 -1.345 14.134 -12.903 1.00 0.00 ATOM 298 CG LYS 37 -0.325 15.117 -12.418 1.00 0.00 ATOM 299 CD LYS 37 1.079 14.810 -12.974 1.00 0.00 ATOM 300 CE LYS 37 2.145 15.772 -12.419 1.00 0.00 ATOM 301 NZ LYS 37 3.459 15.447 -12.989 1.00 0.00 ATOM 302 N TYR 38 -5.181 13.944 -12.885 1.00 0.00 ATOM 303 CA TYR 38 -6.312 13.285 -13.505 1.00 0.00 ATOM 304 C TYR 38 -5.972 13.138 -15.013 1.00 0.00 ATOM 305 O TYR 38 -6.029 14.121 -15.754 1.00 0.00 ATOM 306 CB TYR 38 -7.603 14.060 -13.233 1.00 0.00 ATOM 307 CG TYR 38 -8.164 13.891 -11.875 1.00 0.00 ATOM 308 CD1 TYR 38 -7.832 12.789 -11.098 1.00 0.00 ATOM 309 CD2 TYR 38 -9.108 14.774 -11.346 1.00 0.00 ATOM 310 CE1 TYR 38 -8.349 12.650 -9.788 1.00 0.00 ATOM 311 CE2 TYR 38 -9.651 14.681 -10.031 1.00 0.00 ATOM 312 CZ TYR 38 -9.220 13.592 -9.301 1.00 0.00 ATOM 313 OH TYR 38 -9.735 13.402 -8.035 1.00 0.00 ATOM 314 N THR 39 -6.130 11.897 -15.454 1.00 0.00 ATOM 315 CA THR 39 -5.796 11.406 -16.804 1.00 0.00 ATOM 316 C THR 39 -7.010 11.253 -17.762 1.00 0.00 ATOM 317 O THR 39 -6.846 10.588 -18.815 1.00 0.00 ATOM 318 CB THR 39 -4.974 10.096 -16.673 1.00 0.00 ATOM 319 OG1 THR 39 -4.111 9.988 -15.594 1.00 0.00 ATOM 320 CG2 THR 39 -4.423 9.589 -18.051 1.00 0.00 ATOM 321 N LEU 40 -8.143 11.940 -17.537 1.00 0.00 ATOM 322 CA LEU 40 -9.281 11.762 -18.454 1.00 0.00 ATOM 323 C LEU 40 -9.778 10.263 -18.395 1.00 0.00 ATOM 324 O LEU 40 -9.856 9.567 -19.429 1.00 0.00 ATOM 325 CB LEU 40 -9.003 12.296 -19.873 1.00 0.00 ATOM 326 CG LEU 40 -10.151 12.182 -20.836 1.00 0.00 ATOM 327 CD1 LEU 40 -11.273 13.044 -20.452 1.00 0.00 ATOM 328 CD2 LEU 40 -9.584 12.542 -22.218 1.00 0.00 ATOM 329 N CYS 41 -10.015 9.766 -17.150 1.00 0.00 ATOM 330 CA CYS 41 -10.520 8.456 -16.856 1.00 0.00 ATOM 331 C CYS 41 -9.429 7.422 -17.051 1.00 0.00 ATOM 332 O CYS 41 -8.982 6.778 -16.088 1.00 0.00 ATOM 333 CB CYS 41 -11.655 8.071 -17.724 1.00 0.00 ATOM 334 SG CYS 41 -13.018 9.200 -17.784 1.00 0.00 ATOM 335 OXT CYS 41 -9.000 7.298 -18.195 1.00 0.00 TER END