####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS498_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS498_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 18 - 39 4.95 15.11 LCS_AVERAGE: 43.08 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 21 - 29 1.95 17.69 LCS_AVERAGE: 15.70 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 20 - 26 0.62 19.92 LCS_AVERAGE: 10.18 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 11 3 3 4 4 5 6 7 9 10 11 12 12 15 18 21 21 21 25 27 29 LCS_GDT V 3 V 3 4 6 11 3 3 4 5 5 6 7 8 10 10 10 10 14 15 17 18 19 22 26 29 LCS_GDT Q 4 Q 4 4 6 11 3 3 4 5 5 6 7 9 10 11 12 12 15 20 21 24 26 28 28 31 LCS_GDT G 5 G 5 4 6 13 3 3 4 5 5 6 7 9 11 14 16 18 22 22 24 25 26 29 29 31 LCS_GDT P 6 P 6 4 6 17 3 3 5 5 5 8 10 11 13 15 19 21 23 23 24 25 26 29 29 31 LCS_GDT W 7 W 7 4 6 17 3 3 5 5 6 8 10 11 15 17 20 21 23 23 24 26 26 29 29 31 LCS_GDT V 8 V 8 4 5 17 3 3 5 5 5 8 12 15 17 19 20 21 23 23 24 26 26 29 29 32 LCS_GDT G 9 G 9 4 5 17 3 4 5 7 8 10 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT S 10 S 10 4 5 17 3 4 5 5 5 7 9 11 11 16 18 21 23 23 24 26 26 29 30 32 LCS_GDT S 11 S 11 4 5 17 3 4 5 7 8 10 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT Y 12 Y 12 4 6 17 3 4 4 4 5 7 9 10 15 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT V 13 V 13 5 6 17 4 4 5 7 8 10 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT A 14 A 14 5 6 17 4 4 5 5 6 7 10 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT E 15 E 15 5 6 17 4 4 5 5 6 7 9 10 11 13 16 16 21 23 24 26 26 29 29 32 LCS_GDT T 16 T 16 5 6 17 4 4 5 5 6 7 9 12 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT G 17 G 17 5 6 21 3 3 5 7 8 10 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT Q 18 Q 18 4 6 22 3 4 4 6 8 10 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT N 19 N 19 4 5 22 3 4 4 6 6 10 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT W 20 W 20 7 8 22 5 7 7 7 9 12 15 15 17 19 20 21 23 23 24 26 26 29 29 32 LCS_GDT A 21 A 21 7 9 22 5 7 7 7 9 11 15 15 17 19 20 21 23 23 24 26 26 29 29 31 LCS_GDT S 22 S 22 7 9 22 5 7 7 7 9 12 15 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT L 23 L 23 7 9 22 5 7 7 7 9 12 15 15 17 18 19 20 21 23 24 26 26 29 30 32 LCS_GDT A 24 A 24 7 9 22 5 7 7 7 9 12 15 15 17 18 19 20 20 20 22 26 26 29 30 32 LCS_GDT A 25 A 25 7 9 22 5 7 7 7 9 10 15 15 17 18 19 20 20 20 22 26 26 29 30 32 LCS_GDT N 26 N 26 7 9 22 5 7 7 7 9 12 15 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT E 27 E 27 4 9 22 3 4 4 7 9 12 15 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT L 28 L 28 4 9 22 3 4 4 7 9 12 15 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT R 29 R 29 4 9 22 3 4 4 7 9 12 15 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT V 30 V 30 4 7 22 3 4 4 5 6 9 13 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT T 31 T 31 4 7 22 3 4 4 6 8 12 15 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT E 32 E 32 4 7 22 3 4 4 7 9 12 15 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT R 33 R 33 3 7 22 3 3 4 5 7 9 13 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT P 34 P 34 3 7 22 3 3 4 6 8 12 15 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT F 35 F 35 4 7 22 1 4 4 6 8 12 15 15 17 18 20 21 21 23 24 26 26 29 30 32 LCS_GDT W 36 W 36 4 7 22 3 4 4 7 9 12 15 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT I 37 I 37 4 7 22 3 4 6 6 7 7 10 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT S 38 S 38 4 7 22 3 4 4 6 7 8 10 11 15 18 20 21 23 23 24 26 26 28 30 32 LCS_GDT S 39 S 39 3 7 22 1 3 4 5 7 8 10 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT F 40 F 40 3 7 16 3 3 4 6 7 9 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT I 41 I 41 4 7 16 4 4 6 7 8 10 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT G 42 G 42 4 7 16 4 4 6 6 8 10 12 15 17 19 20 21 23 23 24 26 26 29 29 31 LCS_GDT R 43 R 43 4 7 16 4 4 6 6 6 7 8 11 11 14 16 18 22 22 23 25 26 29 29 31 LCS_GDT S 44 S 44 4 7 16 4 4 6 6 6 7 8 11 11 14 14 16 18 20 21 24 26 28 28 30 LCS_GDT K 45 K 45 3 7 16 3 3 6 6 7 7 9 10 10 12 13 14 15 20 21 21 23 25 26 29 LCS_AVERAGE LCS_A: 22.99 ( 10.18 15.70 43.08 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 7 7 7 9 12 15 15 17 19 20 21 23 23 24 26 26 29 30 32 GDT PERCENT_AT 11.36 15.91 15.91 15.91 20.45 27.27 34.09 34.09 38.64 43.18 45.45 47.73 52.27 52.27 54.55 59.09 59.09 65.91 68.18 72.73 GDT RMS_LOCAL 0.35 0.62 0.62 0.62 1.85 2.39 2.63 2.63 2.94 3.72 3.89 4.05 4.44 4.39 4.69 5.16 5.10 6.14 7.44 7.58 GDT RMS_ALL_AT 19.81 19.92 19.92 19.92 15.91 16.83 16.83 16.83 16.77 12.11 11.86 11.88 12.57 12.57 12.01 11.99 12.37 11.40 12.16 12.08 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 27.626 0 0.176 0.215 30.069 0.000 0.000 - LGA V 3 V 3 23.475 0 0.086 1.149 24.347 0.000 0.000 22.157 LGA Q 4 Q 4 22.023 0 0.273 0.630 28.101 0.000 0.000 28.101 LGA G 5 G 5 19.667 0 0.109 0.109 21.113 0.000 0.000 - LGA P 6 P 6 18.817 0 0.698 0.628 21.258 0.000 0.000 20.409 LGA W 7 W 7 19.973 0 0.267 1.157 25.979 0.000 0.000 22.879 LGA V 8 V 8 18.193 0 0.614 0.992 19.352 0.000 0.000 15.219 LGA G 9 G 9 19.582 0 0.551 0.551 21.806 0.000 0.000 - LGA S 10 S 10 24.309 0 0.038 0.212 26.638 0.000 0.000 25.038 LGA S 11 S 11 25.306 0 0.618 0.870 26.930 0.000 0.000 26.930 LGA Y 12 Y 12 21.590 0 0.444 1.297 23.028 0.000 0.000 20.994 LGA V 13 V 13 19.621 0 0.347 0.955 20.210 0.000 0.000 18.564 LGA A 14 A 14 21.117 0 0.195 0.200 22.964 0.000 0.000 - LGA E 15 E 15 22.710 0 0.103 1.366 29.591 0.000 0.000 29.042 LGA T 16 T 16 19.160 0 0.280 0.948 21.043 0.000 0.000 18.692 LGA G 17 G 17 18.038 0 0.439 0.439 18.545 0.000 0.000 - LGA Q 18 Q 18 12.403 0 0.682 1.324 17.737 0.000 0.000 16.782 LGA N 19 N 19 7.961 0 0.249 0.339 13.478 0.000 0.000 13.478 LGA W 20 W 20 2.309 0 0.584 1.206 8.625 27.273 18.052 8.625 LGA A 21 A 21 3.329 0 0.052 0.057 4.098 21.364 18.182 - LGA S 22 S 22 2.911 0 0.050 0.676 4.675 32.727 25.152 4.675 LGA L 23 L 23 0.896 0 0.099 1.229 2.984 69.545 60.909 2.984 LGA A 24 A 24 2.514 0 0.088 0.088 3.455 34.545 31.273 - LGA A 25 A 25 3.211 0 0.324 0.316 3.927 27.727 24.364 - LGA N 26 N 26 2.082 0 0.217 1.183 6.674 53.182 31.364 6.674 LGA E 27 E 27 2.121 0 0.145 0.790 6.920 38.636 19.394 6.887 LGA L 28 L 28 2.361 0 0.383 0.466 4.875 34.545 30.909 1.794 LGA R 29 R 29 1.920 0 0.442 1.657 7.398 41.364 23.636 6.404 LGA V 30 V 30 4.758 0 0.187 1.201 9.203 4.545 2.597 8.639 LGA T 31 T 31 3.123 0 0.749 0.587 3.902 33.636 34.026 1.348 LGA E 32 E 32 2.960 0 0.337 0.852 9.891 12.273 5.455 9.570 LGA R 33 R 33 5.006 0 0.163 1.522 15.661 8.636 3.140 15.661 LGA P 34 P 34 3.340 0 0.239 0.463 3.867 16.364 16.364 3.867 LGA F 35 F 35 2.594 0 0.593 1.179 10.805 30.909 12.231 10.496 LGA W 36 W 36 2.582 0 0.269 0.235 12.356 25.909 7.403 12.186 LGA I 37 I 37 6.499 0 0.188 1.624 10.442 2.727 1.364 8.855 LGA S 38 S 38 10.428 0 0.207 0.215 14.795 0.000 0.000 10.348 LGA S 39 S 39 15.181 0 0.283 0.417 18.629 0.000 0.000 13.632 LGA F 40 F 40 18.353 0 0.476 1.476 20.414 0.000 0.000 13.953 LGA I 41 I 41 20.194 0 0.555 1.081 22.073 0.000 0.000 20.006 LGA G 42 G 42 26.315 0 0.195 0.195 27.696 0.000 0.000 - LGA R 43 R 43 25.771 0 0.166 1.360 28.483 0.000 0.000 19.139 LGA S 44 S 44 31.722 0 0.162 0.633 35.798 0.000 0.000 35.798 LGA K 45 K 45 34.851 0 0.679 0.866 38.836 0.000 0.000 38.836 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.183 10.081 11.485 11.725 8.314 4.468 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.63 31.250 28.337 0.550 LGA_LOCAL RMSD: 2.626 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.829 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.183 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.008473 * X + 0.430032 * Y + 0.902774 * Z + -10.413462 Y_new = -0.601976 * X + -0.723082 * Y + 0.338787 * Z + 61.849850 Z_new = 0.798469 * X + -0.540578 * Y + 0.264995 * Z + -14.422623 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.584870 -0.924748 -1.115013 [DEG: -90.8064 -52.9842 -63.8856 ] ZXZ: 1.929807 1.302597 2.165931 [DEG: 110.5698 74.6333 124.0987 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS498_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS498_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.63 28.337 10.18 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS498_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 12 N ALA 2 -12.665 52.195 19.358 1.00 13.66 N ATOM 14 CA ALA 2 -11.513 52.117 18.454 1.00 13.66 C ATOM 15 CB ALA 2 -11.454 53.343 17.539 1.00 13.66 C ATOM 16 C ALA 2 -10.194 51.946 19.232 1.00 13.66 C ATOM 17 O ALA 2 -9.782 52.831 19.996 1.00 13.66 O ATOM 18 N VAL 3 -9.582 50.768 19.046 1.00 13.50 N ATOM 20 CA VAL 3 -8.303 50.340 19.654 1.00 13.50 C ATOM 21 CB VAL 3 -8.509 49.147 20.715 1.00 13.50 C ATOM 22 CG1 VAL 3 -9.375 47.996 20.148 1.00 13.50 C ATOM 23 CG2 VAL 3 -7.171 48.640 21.281 1.00 13.50 C ATOM 24 C VAL 3 -7.371 49.964 18.464 1.00 13.50 C ATOM 25 O VAL 3 -7.870 49.477 17.441 1.00 13.50 O ATOM 26 N GLN 4 -6.053 50.199 18.596 1.00 11.86 N ATOM 28 CA GLN 4 -5.079 49.928 17.513 1.00 11.86 C ATOM 29 CB GLN 4 -4.364 51.226 17.110 1.00 11.86 C ATOM 30 CG GLN 4 -5.249 52.222 16.373 1.00 11.86 C ATOM 31 CD GLN 4 -4.521 53.509 16.031 1.00 11.86 C ATOM 32 OE1 GLN 4 -4.555 54.475 16.791 1.00 11.86 O ATOM 33 NE2 GLN 4 -3.855 53.526 14.880 1.00 11.86 N ATOM 36 C GLN 4 -4.063 48.764 17.565 1.00 11.86 C ATOM 37 O GLN 4 -3.056 48.824 18.285 1.00 11.86 O ATOM 38 N GLY 5 -4.408 47.681 16.855 1.00 11.09 N ATOM 40 CA GLY 5 -3.589 46.473 16.739 1.00 11.09 C ATOM 41 C GLY 5 -3.952 45.665 15.507 1.00 11.09 C ATOM 42 O GLY 5 -4.609 46.221 14.653 1.00 11.09 O ATOM 43 N PRO 6 -3.486 44.397 15.327 1.00 11.04 N ATOM 44 CD PRO 6 -2.455 43.659 16.088 1.00 11.04 C ATOM 45 CA PRO 6 -3.860 43.620 14.133 1.00 11.04 C ATOM 46 CB PRO 6 -3.100 42.314 14.327 1.00 11.04 C ATOM 47 CG PRO 6 -1.902 42.735 15.039 1.00 11.04 C ATOM 48 C PRO 6 -5.366 43.339 14.097 1.00 11.04 C ATOM 49 O PRO 6 -6.025 43.382 15.138 1.00 11.04 O ATOM 50 N TRP 7 -5.861 42.926 12.932 1.00 9.77 N ATOM 52 CA TRP 7 -7.278 42.661 12.720 1.00 9.77 C ATOM 53 CB TRP 7 -7.564 42.705 11.212 1.00 9.77 C ATOM 54 CG TRP 7 -8.979 42.389 10.789 1.00 9.77 C ATOM 55 CD2 TRP 7 -9.488 41.123 10.308 1.00 9.77 C ATOM 56 CE2 TRP 7 -10.860 41.321 9.987 1.00 9.77 C ATOM 57 CE3 TRP 7 -8.920 39.842 10.119 1.00 9.77 C ATOM 58 CD1 TRP 7 -10.042 43.266 10.733 1.00 9.77 C ATOM 59 NE1 TRP 7 -11.162 42.629 10.256 1.00 9.77 N ATOM 61 CZ2 TRP 7 -11.679 40.284 9.484 1.00 9.77 C ATOM 62 CZ3 TRP 7 -9.740 38.802 9.615 1.00 9.77 C ATOM 63 CH2 TRP 7 -11.107 39.038 9.305 1.00 9.77 C ATOM 64 C TRP 7 -7.728 41.324 13.310 1.00 9.77 C ATOM 65 O TRP 7 -7.253 40.258 12.896 1.00 9.77 O ATOM 66 N VAL 8 -8.578 41.409 14.344 1.00 10.04 N ATOM 68 CA VAL 8 -9.121 40.214 15.001 1.00 10.04 C ATOM 69 CB VAL 8 -8.365 39.775 16.303 1.00 10.04 C ATOM 70 CG1 VAL 8 -7.852 38.365 16.101 1.00 10.04 C ATOM 71 CG2 VAL 8 -7.179 40.699 16.612 1.00 10.04 C ATOM 72 C VAL 8 -10.622 40.180 15.215 1.00 10.04 C ATOM 73 O VAL 8 -11.253 41.159 15.623 1.00 10.04 O ATOM 74 N GLY 9 -11.160 39.018 14.855 1.00 10.58 N ATOM 76 CA GLY 9 -12.568 38.664 14.927 1.00 10.58 C ATOM 77 C GLY 9 -13.657 39.650 14.568 1.00 10.58 C ATOM 78 O GLY 9 -14.201 40.301 15.469 1.00 10.58 O ATOM 79 N SER 10 -14.010 39.729 13.277 1.00 10.25 N ATOM 81 CA SER 10 -15.082 40.650 12.879 1.00 10.25 C ATOM 82 CB SER 10 -14.610 41.498 11.697 1.00 10.25 C ATOM 83 OG SER 10 -14.598 40.726 10.504 1.00 10.25 O ATOM 85 C SER 10 -16.345 39.928 12.425 1.00 10.25 C ATOM 86 O SER 10 -17.465 40.414 12.622 1.00 10.25 O ATOM 87 N SER 11 -16.117 38.756 11.833 1.00 11.88 N ATOM 89 CA SER 11 -17.127 37.827 11.339 1.00 11.88 C ATOM 90 OG SER 11 -17.824 39.073 9.398 1.00 11.88 O ATOM 92 C SER 11 -16.620 36.522 11.914 1.00 11.88 C ATOM 93 O SER 11 -15.685 35.925 11.364 1.00 11.88 O ATOM 94 CB SER 11 -17.229 37.854 9.810 1.00 11.88 C ATOM 95 N TYR 12 -17.236 36.089 13.014 1.00 11.94 N ATOM 97 CA TYR 12 -16.840 34.902 13.781 1.00 11.94 C ATOM 98 CB TYR 12 -17.689 34.793 15.064 1.00 11.94 C ATOM 99 CG TYR 12 -17.748 36.028 15.966 1.00 11.94 C ATOM 100 CD1 TYR 12 -18.758 37.008 15.801 1.00 11.94 C ATOM 101 CE1 TYR 12 -18.838 38.139 16.661 1.00 11.94 C ATOM 102 CD2 TYR 12 -16.816 36.210 17.019 1.00 11.94 C ATOM 103 CE2 TYR 12 -16.888 37.338 17.883 1.00 11.94 C ATOM 104 CZ TYR 12 -17.900 38.293 17.695 1.00 11.94 C ATOM 105 OH TYR 12 -17.971 39.385 18.530 1.00 11.94 O ATOM 107 C TYR 12 -16.906 33.605 12.970 1.00 11.94 C ATOM 108 O TYR 12 -17.641 32.654 13.283 1.00 11.94 O ATOM 109 N VAL 13 -16.109 33.632 11.893 1.00 11.69 N ATOM 111 CA VAL 13 -15.914 32.539 10.943 1.00 11.69 C ATOM 112 CB VAL 13 -15.608 33.110 9.488 1.00 11.69 C ATOM 113 CG1 VAL 13 -14.255 33.820 9.422 1.00 11.69 C ATOM 114 CG2 VAL 13 -15.734 32.016 8.418 1.00 11.69 C ATOM 115 C VAL 13 -14.770 31.695 11.575 1.00 11.69 C ATOM 116 O VAL 13 -14.036 30.967 10.880 1.00 11.69 O ATOM 117 N ALA 14 -14.787 31.678 12.922 1.00 12.64 N ATOM 119 CA ALA 14 -13.822 30.971 13.773 1.00 12.64 C ATOM 120 CB ALA 14 -14.002 31.377 15.218 1.00 12.64 C ATOM 121 C ALA 14 -14.058 29.482 13.650 1.00 12.64 C ATOM 122 O ALA 14 -13.340 28.654 14.235 1.00 12.64 O ATOM 123 N GLU 15 -15.054 29.168 12.825 1.00 14.43 N ATOM 125 CA GLU 15 -15.456 27.809 12.562 1.00 14.43 C ATOM 126 CB GLU 15 -16.984 27.759 12.406 1.00 14.43 C ATOM 127 CG GLU 15 -17.763 28.626 13.401 1.00 14.43 C ATOM 128 CD GLU 15 -19.265 28.538 13.203 1.00 14.43 C ATOM 129 OE1 GLU 15 -19.900 27.661 13.825 1.00 14.43 O ATOM 130 OE2 GLU 15 -19.811 29.350 12.425 1.00 14.43 O ATOM 131 C GLU 15 -14.787 27.284 11.294 1.00 14.43 C ATOM 132 O GLU 15 -14.111 26.249 11.349 1.00 14.43 O ATOM 133 N THR 16 -14.950 28.004 10.169 1.00 14.65 N ATOM 135 CA THR 16 -14.402 27.524 8.895 1.00 14.65 C ATOM 136 CB THR 16 -15.652 27.060 8.041 1.00 14.65 C ATOM 137 OG1 THR 16 -15.247 26.610 6.740 1.00 14.65 O ATOM 139 CG2 THR 16 -16.693 28.221 7.911 1.00 14.65 C ATOM 140 C THR 16 -13.389 28.081 7.859 1.00 14.65 C ATOM 141 O THR 16 -12.234 27.642 7.787 1.00 14.65 O ATOM 142 N GLY 17 -13.889 29.036 7.065 1.00 13.92 N ATOM 144 CA GLY 17 -13.207 29.546 5.885 1.00 13.92 C ATOM 145 C GLY 17 -11.826 29.801 5.337 1.00 13.92 C ATOM 146 O GLY 17 -11.275 28.879 4.733 1.00 13.92 O ATOM 147 N GLN 18 -11.240 30.977 5.549 1.00 13.54 N ATOM 149 CA GLN 18 -9.893 31.220 5.031 1.00 13.54 C ATOM 150 CB GLN 18 -9.968 32.233 3.873 1.00 13.54 C ATOM 151 CG GLN 18 -10.821 33.480 4.142 1.00 13.54 C ATOM 152 CD GLN 18 -10.850 34.432 2.963 1.00 13.54 C ATOM 153 OE1 GLN 18 -11.726 34.345 2.102 1.00 13.54 O ATOM 154 NE2 GLN 18 -9.890 35.350 2.918 1.00 13.54 N ATOM 157 C GLN 18 -8.840 31.667 6.004 1.00 13.54 C ATOM 158 O GLN 18 -7.649 31.703 5.675 1.00 13.54 O ATOM 159 N ASN 19 -9.270 31.942 7.230 1.00 11.47 N ATOM 161 CA ASN 19 -8.347 32.503 8.188 1.00 11.47 C ATOM 162 CB ASN 19 -8.742 33.950 8.511 1.00 11.47 C ATOM 163 CG ASN 19 -8.545 34.887 7.308 1.00 11.47 C ATOM 164 OD1 ASN 19 -9.479 35.144 6.547 1.00 11.47 O ATOM 165 ND2 ASN 19 -7.331 35.416 7.155 1.00 11.47 N ATOM 168 C ASN 19 -7.729 31.735 9.339 1.00 11.47 C ATOM 169 O ASN 19 -7.129 32.335 10.236 1.00 11.47 O ATOM 170 N TRP 20 -7.710 30.402 9.240 1.00 12.03 N ATOM 172 CA TRP 20 -7.088 29.623 10.311 1.00 12.03 C ATOM 173 CB TRP 20 -7.660 28.200 10.315 1.00 12.03 C ATOM 174 CG TRP 20 -7.539 27.459 11.653 1.00 12.03 C ATOM 175 CD2 TRP 20 -8.444 27.515 12.781 1.00 12.03 C ATOM 176 CE2 TRP 20 -7.936 26.623 13.769 1.00 12.03 C ATOM 177 CE3 TRP 20 -9.632 28.231 13.056 1.00 12.03 C ATOM 178 CD1 TRP 20 -6.557 26.558 12.007 1.00 12.03 C ATOM 179 NE1 TRP 20 -6.793 26.062 13.265 1.00 12.03 N ATOM 181 CZ2 TRP 20 -8.574 26.424 15.018 1.00 12.03 C ATOM 182 CZ3 TRP 20 -10.273 28.034 14.305 1.00 12.03 C ATOM 183 CH2 TRP 20 -9.736 27.133 15.267 1.00 12.03 C ATOM 184 C TRP 20 -5.582 29.628 10.023 1.00 12.03 C ATOM 185 O TRP 20 -4.783 29.059 10.776 1.00 12.03 O ATOM 186 N ALA 21 -5.229 30.407 8.991 1.00 11.98 N ATOM 188 CA ALA 21 -3.855 30.650 8.572 1.00 11.98 C ATOM 189 CB ALA 21 -3.847 30.928 7.108 1.00 11.98 C ATOM 190 C ALA 21 -3.437 31.904 9.319 1.00 11.98 C ATOM 191 O ALA 21 -2.262 32.114 9.603 1.00 11.98 O ATOM 192 N SER 22 -4.451 32.696 9.684 1.00 10.75 N ATOM 194 CA SER 22 -4.275 33.940 10.425 1.00 10.75 C ATOM 195 CB SER 22 -5.365 34.931 10.028 1.00 10.75 C ATOM 196 OG SER 22 -5.008 36.249 10.383 1.00 10.75 O ATOM 198 C SER 22 -4.240 33.713 11.948 1.00 10.75 C ATOM 199 O SER 22 -3.536 34.437 12.658 1.00 10.75 O ATOM 200 N LEU 23 -4.876 32.623 12.417 1.00 11.19 N ATOM 202 CA LEU 23 -4.915 32.284 13.859 1.00 11.19 C ATOM 203 CB LEU 23 -6.105 31.354 14.197 1.00 11.19 C ATOM 204 CG LEU 23 -6.509 31.134 15.676 1.00 11.19 C ATOM 205 CD1 LEU 23 -8.015 31.313 15.827 1.00 11.19 C ATOM 206 CD2 LEU 23 -6.082 29.747 16.181 1.00 11.19 C ATOM 207 C LEU 23 -3.591 31.635 14.257 1.00 11.19 C ATOM 208 O LEU 23 -3.274 31.523 15.447 1.00 11.19 O ATOM 209 N ALA 24 -2.829 31.231 13.239 1.00 12.53 N ATOM 211 CA ALA 24 -1.522 30.607 13.414 1.00 12.53 C ATOM 212 CB ALA 24 -1.160 29.923 12.145 1.00 12.53 C ATOM 213 C ALA 24 -0.512 31.718 13.727 1.00 12.53 C ATOM 214 O ALA 24 0.548 31.475 14.309 1.00 12.53 O ATOM 215 N ALA 25 -0.922 32.942 13.383 1.00 11.90 N ATOM 217 CA ALA 25 -0.203 34.200 13.615 1.00 11.90 C ATOM 218 CB ALA 25 -0.460 35.181 12.480 1.00 11.90 C ATOM 219 C ALA 25 -0.594 34.783 14.994 1.00 11.90 C ATOM 220 O ALA 25 -0.384 35.980 15.258 1.00 11.90 O ATOM 221 N ASN 26 -1.066 33.901 15.896 1.00 13.04 N ATOM 223 CA ASN 26 -1.575 34.279 17.237 1.00 13.04 C ATOM 224 CB ASN 26 -2.325 33.088 17.883 1.00 13.04 C ATOM 225 CG ASN 26 -1.394 31.938 18.299 1.00 13.04 C ATOM 226 OD1 ASN 26 -0.902 31.899 19.428 1.00 13.04 O ATOM 227 ND2 ASN 26 -1.167 30.998 17.386 1.00 13.04 N ATOM 230 C ASN 26 -0.527 34.819 18.231 1.00 13.04 C ATOM 231 O ASN 26 -0.860 35.148 19.381 1.00 13.04 O ATOM 232 N GLU 27 0.710 34.969 17.749 1.00 13.92 N ATOM 234 CA GLU 27 1.822 35.481 18.552 1.00 13.92 C ATOM 235 CG GLU 27 3.403 34.428 16.737 1.00 13.92 C ATOM 236 CD GLU 27 4.703 33.674 16.526 1.00 13.92 C ATOM 237 OE1 GLU 27 5.753 34.329 16.359 1.00 13.92 O ATOM 238 OE2 GLU 27 4.674 32.425 16.526 1.00 13.92 O ATOM 239 C GLU 27 1.999 37.011 18.428 1.00 13.92 C ATOM 240 O GLU 27 2.911 37.594 19.026 1.00 13.92 O ATOM 241 CB GLU 27 3.120 34.717 18.218 1.00 13.92 C ATOM 242 N LEU 28 1.092 37.633 17.666 1.00 12.35 N ATOM 244 CA LEU 28 1.045 39.086 17.442 1.00 12.35 C ATOM 245 CB LEU 28 1.138 39.415 15.937 1.00 12.35 C ATOM 246 CG LEU 28 2.517 39.323 15.250 1.00 12.35 C ATOM 247 CD1 LEU 28 2.411 38.463 13.992 1.00 12.35 C ATOM 248 CD2 LEU 28 3.061 40.714 14.896 1.00 12.35 C ATOM 249 C LEU 28 -0.234 39.621 18.123 1.00 12.35 C ATOM 250 O LEU 28 -1.267 39.832 17.473 1.00 12.35 O ATOM 251 N ARG 29 -0.080 39.998 19.399 1.00 14.28 N ATOM 253 CA ARG 29 -1.162 40.444 20.310 1.00 14.28 C ATOM 254 CB ARG 29 -0.570 41.274 21.447 1.00 14.28 C ATOM 255 CG ARG 29 0.309 40.471 22.389 1.00 14.28 C ATOM 256 CD ARG 29 0.873 41.345 23.501 1.00 14.28 C ATOM 257 NE ARG 29 1.725 40.585 24.419 1.00 14.28 N ATOM 259 CZ ARG 29 2.351 41.091 25.482 1.00 14.28 C ATOM 260 NH1 ARG 29 2.241 42.378 25.799 1.00 14.28 N ATOM 263 NH2 ARG 29 3.097 40.298 26.240 1.00 14.28 N ATOM 266 C ARG 29 -2.446 41.114 19.785 1.00 14.28 C ATOM 267 O ARG 29 -2.404 42.021 18.943 1.00 14.28 O ATOM 268 N VAL 30 -3.567 40.661 20.366 1.00 15.20 N ATOM 270 CA VAL 30 -4.944 41.055 20.022 1.00 15.20 C ATOM 271 CB VAL 30 -5.949 39.844 20.307 1.00 15.20 C ATOM 272 CG1 VAL 30 -5.820 39.355 21.750 1.00 15.20 C ATOM 273 CG2 VAL 30 -7.415 40.200 20.007 1.00 15.20 C ATOM 274 C VAL 30 -5.485 42.398 20.569 1.00 15.20 C ATOM 275 O VAL 30 -5.991 42.495 21.694 1.00 15.20 O ATOM 276 N THR 31 -5.235 43.431 19.762 1.00 16.15 N ATOM 278 CA THR 31 -5.698 44.816 19.922 1.00 16.15 C ATOM 279 CB THR 31 -4.517 45.796 20.142 1.00 16.15 C ATOM 280 OG1 THR 31 -3.364 45.328 19.432 1.00 16.15 O ATOM 282 CG2 THR 31 -4.170 45.867 21.609 1.00 16.15 C ATOM 283 C THR 31 -6.363 44.936 18.538 1.00 16.15 C ATOM 284 O THR 31 -5.773 44.485 17.552 1.00 16.15 O ATOM 285 N GLU 32 -7.589 45.458 18.436 1.00 16.01 N ATOM 287 CA GLU 32 -8.237 45.451 17.117 1.00 16.01 C ATOM 288 CB GLU 32 -9.621 44.781 17.240 1.00 16.01 C ATOM 289 CG GLU 32 -9.600 43.283 17.502 1.00 16.01 C ATOM 290 CD GLU 32 -10.840 42.800 18.243 1.00 16.01 C ATOM 291 OE1 GLU 32 -10.730 42.515 19.454 1.00 16.01 O ATOM 292 OE2 GLU 32 -11.922 42.705 17.623 1.00 16.01 O ATOM 293 C GLU 32 -8.354 46.672 16.190 1.00 16.01 C ATOM 294 O GLU 32 -9.394 47.338 16.155 1.00 16.01 O ATOM 295 N ARG 33 -7.250 46.991 15.498 1.00 15.08 N ATOM 297 CA ARG 33 -7.218 47.994 14.418 1.00 15.08 C ATOM 298 CB ARG 33 -6.124 49.073 14.534 1.00 15.08 C ATOM 299 CG ARG 33 -4.760 48.834 13.841 1.00 15.08 C ATOM 300 CD ARG 33 -3.999 50.121 13.544 1.00 15.08 C ATOM 301 NE ARG 33 -4.634 50.926 12.494 1.00 15.08 N ATOM 303 CZ ARG 33 -4.135 52.049 11.977 1.00 15.08 C ATOM 304 NH1 ARG 33 -2.974 52.543 12.396 1.00 15.08 N ATOM 307 NH2 ARG 33 -4.808 52.686 11.029 1.00 15.08 N ATOM 310 C ARG 33 -6.943 47.055 13.238 1.00 15.08 C ATOM 311 O ARG 33 -6.319 46.020 13.439 1.00 15.08 O ATOM 312 N PRO 34 -7.424 47.345 12.023 1.00 13.44 N ATOM 313 CD PRO 34 -8.550 48.149 11.495 1.00 13.44 C ATOM 314 CA PRO 34 -7.022 46.301 11.062 1.00 13.44 C ATOM 315 CB PRO 34 -8.167 46.338 10.049 1.00 13.44 C ATOM 316 CG PRO 34 -8.572 47.770 10.052 1.00 13.44 C ATOM 317 C PRO 34 -5.604 46.293 10.398 1.00 13.44 C ATOM 318 O PRO 34 -5.294 47.216 9.634 1.00 13.44 O ATOM 319 N PHE 35 -4.741 45.311 10.736 1.00 11.02 N ATOM 321 CA PHE 35 -3.416 45.216 10.083 1.00 11.02 C ATOM 322 CB PHE 35 -2.288 45.384 11.141 1.00 11.02 C ATOM 323 CG PHE 35 -0.915 45.760 10.576 1.00 11.02 C ATOM 324 CD1 PHE 35 -0.610 47.101 10.232 1.00 11.02 C ATOM 325 CD2 PHE 35 0.098 44.782 10.431 1.00 11.02 C ATOM 326 CE1 PHE 35 0.679 47.462 9.751 1.00 11.02 C ATOM 327 CE2 PHE 35 1.392 45.128 9.951 1.00 11.02 C ATOM 328 CZ PHE 35 1.682 46.472 9.611 1.00 11.02 C ATOM 329 C PHE 35 -3.292 43.867 9.313 1.00 11.02 C ATOM 330 O PHE 35 -2.191 43.359 9.052 1.00 11.02 O ATOM 331 N TRP 36 -4.460 43.362 8.896 1.00 9.25 N ATOM 333 CA TRP 36 -4.676 42.192 8.019 1.00 9.25 C ATOM 334 CB TRP 36 -5.454 41.055 8.718 1.00 9.25 C ATOM 335 CG TRP 36 -4.654 40.257 9.755 1.00 9.25 C ATOM 336 CD2 TRP 36 -3.716 39.185 9.507 1.00 9.25 C ATOM 337 CE2 TRP 36 -3.229 38.757 10.773 1.00 9.25 C ATOM 338 CE3 TRP 36 -3.237 38.546 8.339 1.00 9.25 C ATOM 339 CD1 TRP 36 -4.689 40.416 11.121 1.00 9.25 C ATOM 340 NE1 TRP 36 -3.840 39.525 11.728 1.00 9.25 N ATOM 342 CZ2 TRP 36 -2.283 37.717 10.910 1.00 9.25 C ATOM 343 CZ3 TRP 36 -2.290 37.503 8.475 1.00 9.25 C ATOM 344 CH2 TRP 36 -1.826 37.104 9.758 1.00 9.25 C ATOM 345 C TRP 36 -5.509 42.925 6.951 1.00 9.25 C ATOM 346 O TRP 36 -6.722 42.702 6.808 1.00 9.25 O ATOM 347 N ILE 37 -4.806 43.741 6.167 1.00 8.08 N ATOM 349 CA ILE 37 -5.360 44.663 5.158 1.00 8.08 C ATOM 350 CB ILE 37 -4.213 45.611 4.633 1.00 8.08 C ATOM 351 CG2 ILE 37 -4.171 46.884 5.493 1.00 8.08 C ATOM 352 CG1 ILE 37 -2.855 44.875 4.623 1.00 8.08 C ATOM 353 CD1 ILE 37 -1.906 45.271 3.482 1.00 8.08 C ATOM 354 C ILE 37 -6.198 44.162 3.957 1.00 8.08 C ATOM 355 O ILE 37 -6.565 44.971 3.087 1.00 8.08 O ATOM 356 N SER 38 -6.560 42.874 3.934 1.00 8.98 N ATOM 358 CA SER 38 -7.297 42.357 2.778 1.00 8.98 C ATOM 359 CB SER 38 -6.824 40.929 2.506 1.00 8.98 C ATOM 360 OG SER 38 -7.164 40.071 3.582 1.00 8.98 O ATOM 362 C SER 38 -8.812 42.381 2.502 1.00 8.98 C ATOM 363 O SER 38 -9.191 42.949 1.472 1.00 8.98 O ATOM 364 N SER 39 -9.679 41.836 3.372 1.00 8.35 N ATOM 366 CA SER 39 -11.104 41.805 2.990 1.00 8.35 C ATOM 367 CB SER 39 -11.523 40.332 3.017 1.00 8.35 C ATOM 368 OG SER 39 -11.166 39.754 4.265 1.00 8.35 O ATOM 370 C SER 39 -12.313 42.617 3.493 1.00 8.35 C ATOM 371 O SER 39 -12.855 43.434 2.742 1.00 8.35 O ATOM 372 N PHE 40 -12.697 42.414 4.759 1.00 7.09 N ATOM 374 CA PHE 40 -13.857 43.060 5.399 1.00 7.09 C ATOM 375 CB PHE 40 -15.056 42.071 5.505 1.00 7.09 C ATOM 376 CG PHE 40 -14.694 40.661 5.975 1.00 7.09 C ATOM 377 CD1 PHE 40 -14.427 39.636 5.037 1.00 7.09 C ATOM 378 CD2 PHE 40 -14.688 40.330 7.351 1.00 7.09 C ATOM 379 CE1 PHE 40 -14.158 38.305 5.455 1.00 7.09 C ATOM 380 CE2 PHE 40 -14.422 39.001 7.784 1.00 7.09 C ATOM 381 CZ PHE 40 -14.157 37.987 6.833 1.00 7.09 C ATOM 382 C PHE 40 -13.619 43.841 6.696 1.00 7.09 C ATOM 383 O PHE 40 -14.068 43.393 7.767 1.00 7.09 O ATOM 384 N ILE 41 -13.062 45.050 6.604 1.00 5.44 N ATOM 386 CA ILE 41 -12.732 45.860 7.801 1.00 5.44 C ATOM 387 CB ILE 41 -11.784 47.049 7.415 1.00 5.44 C ATOM 388 CG2 ILE 41 -10.389 46.507 7.052 1.00 5.44 C ATOM 389 CG1 ILE 41 -12.399 47.893 6.279 1.00 5.44 C ATOM 390 CD1 ILE 41 -12.100 49.397 6.346 1.00 5.44 C ATOM 391 C ILE 41 -13.890 46.387 8.685 1.00 5.44 C ATOM 392 O ILE 41 -13.692 47.285 9.521 1.00 5.44 O ATOM 393 N GLY 42 -15.063 45.753 8.561 1.00 4.71 N ATOM 395 CA GLY 42 -16.260 46.099 9.331 1.00 4.71 C ATOM 396 C GLY 42 -16.430 47.520 9.833 1.00 4.71 C ATOM 397 O GLY 42 -16.981 47.761 10.911 1.00 4.71 O ATOM 398 N ARG 43 -15.814 48.426 9.074 1.00 4.74 N ATOM 400 CA ARG 43 -15.823 49.867 9.264 1.00 4.74 C ATOM 401 CB ARG 43 -14.443 50.498 9.104 1.00 4.74 C ATOM 402 CG ARG 43 -13.649 50.554 10.401 1.00 4.74 C ATOM 403 CD ARG 43 -12.320 51.291 10.235 1.00 4.74 C ATOM 404 NE ARG 43 -11.371 50.578 9.374 1.00 4.74 N ATOM 406 CZ ARG 43 -10.184 51.047 8.985 1.00 4.74 C ATOM 407 NH1 ARG 43 -9.413 50.306 8.202 1.00 4.74 N ATOM 410 NH2 ARG 43 -9.759 52.248 9.367 1.00 4.74 N ATOM 413 C ARG 43 -16.798 50.293 8.192 1.00 4.74 C ATOM 414 O ARG 43 -17.324 49.436 7.474 1.00 4.74 O ATOM 415 N SER 44 -17.054 51.587 8.076 1.00 4.01 N ATOM 417 CA SER 44 -18.072 52.046 7.164 1.00 4.01 C ATOM 418 CB SER 44 -18.729 53.275 7.756 1.00 4.01 C ATOM 419 OG SER 44 -20.009 53.439 7.188 1.00 4.01 O ATOM 421 C SER 44 -17.902 52.227 5.668 1.00 4.01 C ATOM 422 O SER 44 -16.802 52.289 5.105 1.00 4.01 O ATOM 423 N LYS 45 -19.096 52.394 5.104 1.00 3.97 N ATOM 425 CA LYS 45 -19.448 52.522 3.712 1.00 3.97 C ATOM 426 CG LYS 45 -21.846 52.218 4.717 1.00 3.97 C ATOM 427 CD LYS 45 -23.212 51.611 4.447 1.00 3.97 C ATOM 428 CE LYS 45 -24.170 51.876 5.598 1.00 3.97 C ATOM 429 NZ LYS 45 -25.515 51.286 5.348 1.00 3.97 N ATOM 433 C LYS 45 -19.313 53.874 2.997 1.00 3.97 C ATOM 434 O LYS 45 -19.718 53.978 1.844 1.00 3.97 O ATOM 435 CB LYS 45 -20.875 51.951 3.552 1.00 3.97 C TER END