####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS497_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS497_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 2 - 22 4.84 13.04 LONGEST_CONTINUOUS_SEGMENT: 21 3 - 23 4.92 11.65 LCS_AVERAGE: 42.67 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 1.29 12.26 LONGEST_CONTINUOUS_SEGMENT: 8 29 - 36 1.89 17.13 LCS_AVERAGE: 14.88 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 20 - 26 0.82 11.48 LCS_AVERAGE: 10.38 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 21 3 3 4 4 6 9 12 16 18 22 26 27 30 33 33 35 37 37 38 38 LCS_GDT V 3 V 3 4 6 21 3 3 4 7 10 12 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT Q 4 Q 4 4 6 21 3 4 4 7 7 10 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT G 5 G 5 4 6 21 3 4 4 5 7 8 11 14 15 19 23 27 31 32 34 35 37 39 40 40 LCS_GDT P 6 P 6 4 6 21 3 4 5 6 7 8 10 11 11 12 15 22 24 29 32 35 37 39 39 40 LCS_GDT W 7 W 7 4 6 21 3 4 5 6 6 8 10 11 15 17 20 23 26 30 34 35 37 39 40 40 LCS_GDT V 8 V 8 4 6 21 3 3 5 6 7 8 11 14 16 19 25 29 31 33 34 35 37 39 40 40 LCS_GDT G 9 G 9 4 6 21 3 3 4 6 7 8 11 14 16 23 27 29 31 33 34 35 37 39 40 40 LCS_GDT S 10 S 10 4 6 21 4 4 4 5 7 8 12 14 17 21 26 29 31 33 34 35 37 39 40 40 LCS_GDT S 11 S 11 4 6 21 4 4 5 5 5 6 11 14 17 21 26 29 30 33 34 35 37 37 40 40 LCS_GDT Y 12 Y 12 4 6 21 4 4 4 5 6 8 10 14 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT V 13 V 13 4 6 21 4 4 4 5 6 9 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT A 14 A 14 4 4 21 3 4 4 7 7 9 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT E 15 E 15 4 5 21 3 4 4 6 10 12 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT T 16 T 16 4 5 21 3 4 4 6 10 12 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT G 17 G 17 4 5 21 3 4 4 7 10 12 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT Q 18 Q 18 4 5 21 3 4 5 7 10 12 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT N 19 N 19 4 5 21 3 3 5 6 7 10 12 16 19 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT W 20 W 20 7 8 21 6 6 7 8 8 10 12 14 17 22 26 29 31 33 34 35 37 38 40 40 LCS_GDT A 21 A 21 7 8 21 6 6 7 8 8 10 12 14 17 22 26 29 31 33 34 35 37 39 40 40 LCS_GDT S 22 S 22 7 8 21 6 6 7 8 10 12 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT L 23 L 23 7 8 21 6 6 7 8 10 12 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT A 24 A 24 7 8 19 6 6 7 8 8 10 11 13 19 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT A 25 A 25 7 8 19 6 6 7 8 8 11 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT N 26 N 26 7 8 19 3 4 7 8 8 10 11 13 15 18 22 28 31 32 34 35 37 39 40 40 LCS_GDT E 27 E 27 4 8 18 3 4 4 6 8 10 10 11 11 13 18 22 24 25 28 33 37 39 40 40 LCS_GDT L 28 L 28 3 5 18 3 4 5 6 6 7 7 10 11 12 14 16 23 25 27 28 30 32 38 40 LCS_GDT R 29 R 29 3 8 18 3 4 4 5 8 8 8 10 11 12 14 19 23 25 26 28 35 39 39 40 LCS_GDT V 30 V 30 4 8 18 3 4 4 6 8 8 8 10 15 17 21 22 26 32 34 35 37 39 40 40 LCS_GDT T 31 T 31 4 8 18 3 3 4 6 8 8 9 14 19 24 27 29 31 32 34 35 37 39 40 40 LCS_GDT E 32 E 32 4 8 18 3 3 4 6 8 8 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT R 33 R 33 4 8 18 3 3 4 7 10 12 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT P 34 P 34 3 8 18 1 3 4 7 10 12 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT F 35 F 35 3 8 15 3 3 4 6 10 12 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT W 36 W 36 6 8 15 4 4 6 7 10 12 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT I 37 I 37 6 7 15 4 4 6 6 6 7 9 14 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT S 38 S 38 6 7 15 4 4 6 6 6 7 11 14 19 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT S 39 S 39 6 7 15 4 4 6 6 6 12 14 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT F 40 F 40 6 7 15 4 4 6 6 6 7 12 16 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT I 41 I 41 6 7 15 4 5 7 8 8 10 12 18 21 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT G 42 G 42 3 7 15 3 4 4 4 5 9 11 13 19 25 27 29 31 33 34 35 37 39 40 40 LCS_GDT R 43 R 43 3 4 15 3 4 4 4 5 7 11 13 17 24 27 29 31 33 34 35 37 39 40 40 LCS_GDT S 44 S 44 3 4 15 3 3 3 4 4 6 8 13 16 19 25 28 31 32 34 35 37 39 40 40 LCS_GDT K 45 K 45 3 4 13 3 3 3 4 4 9 11 13 13 16 20 22 24 25 28 31 34 38 40 40 LCS_AVERAGE LCS_A: 22.64 ( 10.38 14.88 42.67 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 6 7 8 10 12 14 18 21 25 27 29 31 33 34 35 37 39 40 40 GDT PERCENT_AT 13.64 13.64 15.91 18.18 22.73 27.27 31.82 40.91 47.73 56.82 61.36 65.91 70.45 75.00 77.27 79.55 84.09 88.64 90.91 90.91 GDT RMS_LOCAL 0.31 0.31 0.82 1.05 1.80 2.01 2.41 3.06 3.31 3.72 3.94 4.17 4.41 4.65 4.79 4.93 5.45 5.89 5.90 5.91 GDT RMS_ALL_AT 10.94 10.94 11.48 10.80 8.59 8.43 8.20 7.48 7.50 7.33 7.14 7.08 7.38 7.60 7.18 7.09 6.76 6.77 6.78 6.77 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 8.168 0 0.063 0.076 9.681 0.455 0.364 - LGA V 3 V 3 2.185 0 0.049 1.079 6.309 34.091 20.519 6.309 LGA Q 4 Q 4 2.895 0 0.633 0.873 9.809 19.545 8.889 9.472 LGA G 5 G 5 9.926 0 0.342 0.342 11.629 0.000 0.000 - LGA P 6 P 6 14.424 0 0.669 0.641 18.108 0.000 0.000 18.108 LGA W 7 W 7 12.037 0 0.325 0.452 18.035 0.000 0.000 17.242 LGA V 8 V 8 7.521 0 0.661 0.772 8.970 1.364 0.779 5.314 LGA G 9 G 9 6.845 0 0.453 0.453 7.767 0.000 0.000 - LGA S 10 S 10 9.033 0 0.458 0.716 12.602 0.000 0.000 12.602 LGA S 11 S 11 8.949 0 0.036 0.666 10.400 0.000 0.000 10.400 LGA Y 12 Y 12 4.855 0 0.032 1.523 11.485 0.909 1.212 11.485 LGA V 13 V 13 3.399 0 0.571 0.913 5.053 10.000 21.558 4.515 LGA A 14 A 14 3.595 0 0.590 0.575 5.647 15.455 12.364 - LGA E 15 E 15 3.702 0 0.010 1.407 8.221 18.636 8.283 8.221 LGA T 16 T 16 3.188 0 0.144 0.272 6.194 30.909 18.182 4.638 LGA G 17 G 17 2.154 0 0.512 0.512 4.712 35.909 35.909 - LGA Q 18 Q 18 1.091 0 0.605 1.162 8.352 50.909 25.859 5.741 LGA N 19 N 19 5.798 0 0.047 0.197 8.074 2.727 1.591 4.917 LGA W 20 W 20 8.330 0 0.612 1.112 15.111 0.000 0.000 15.111 LGA A 21 A 21 6.506 0 0.034 0.037 7.674 5.909 4.727 - LGA S 22 S 22 2.940 0 0.023 0.658 4.290 40.909 31.212 3.138 LGA L 23 L 23 2.794 0 0.016 0.853 7.564 17.727 12.727 7.564 LGA A 24 A 24 6.037 0 0.054 0.059 6.890 0.455 0.364 - LGA A 25 A 25 2.918 0 0.117 0.120 6.443 11.364 16.727 - LGA N 26 N 26 8.143 0 0.127 0.780 12.227 0.000 0.000 7.405 LGA E 27 E 27 12.944 0 0.096 1.395 17.880 0.000 0.000 17.880 LGA L 28 L 28 15.678 0 0.329 0.754 17.670 0.000 0.000 14.167 LGA R 29 R 29 15.367 0 0.288 1.356 25.692 0.000 0.000 25.417 LGA V 30 V 30 10.358 0 0.122 0.732 11.688 0.000 0.000 10.960 LGA T 31 T 31 6.412 0 0.637 0.507 8.845 0.909 0.519 8.845 LGA E 32 E 32 3.771 0 0.126 1.021 7.665 25.455 11.313 6.378 LGA R 33 R 33 3.057 0 0.111 1.387 11.230 20.000 7.273 11.230 LGA P 34 P 34 2.383 0 0.092 0.101 4.326 25.455 20.779 3.785 LGA F 35 F 35 2.998 0 0.609 0.669 7.281 33.636 12.893 7.281 LGA W 36 W 36 1.830 0 0.609 1.154 7.295 48.182 19.481 5.652 LGA I 37 I 37 5.125 0 0.121 1.264 11.205 5.000 2.500 11.205 LGA S 38 S 38 5.671 0 0.077 0.088 7.853 4.545 3.030 7.381 LGA S 39 S 39 3.478 0 0.143 0.709 5.403 20.909 13.939 5.184 LGA F 40 F 40 4.635 0 0.090 1.589 13.442 10.455 3.802 13.442 LGA I 41 I 41 4.701 0 0.595 0.529 9.454 15.455 7.727 9.454 LGA G 42 G 42 5.427 0 0.396 0.396 6.101 0.000 0.000 - LGA R 43 R 43 6.493 0 0.693 1.274 9.013 0.000 0.331 7.892 LGA S 44 S 44 9.287 0 0.092 0.597 10.528 0.000 0.000 9.522 LGA K 45 K 45 14.142 0 0.641 0.754 19.546 0.000 0.000 19.546 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 6.702 6.594 8.429 11.529 7.383 0.987 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 18 3.06 38.068 33.434 0.570 LGA_LOCAL RMSD: 3.056 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.475 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 6.702 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.971192 * X + 0.017672 * Y + 0.237642 * Z + 18.666811 Y_new = 0.189967 * X + -0.659491 * Y + -0.727313 * Z + 45.982311 Z_new = 0.143870 * X + 0.751504 * Y + -0.643850 * Z + 7.644105 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.193163 -0.144371 2.279195 [DEG: 11.0674 -8.2718 130.5883 ] ZXZ: 0.315805 2.270315 0.189154 [DEG: 18.0943 130.0795 10.8377 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS497_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS497_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 18 3.06 33.434 6.70 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS497_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 12 N ALA 2 7.186 31.390 6.494 1.00 5.54 N ATOM 14 CA ALA 2 8.070 32.568 6.554 1.00 5.54 C ATOM 15 CB ALA 2 7.787 33.490 5.382 1.00 5.54 C ATOM 16 C ALA 2 7.957 33.346 7.874 1.00 5.54 C ATOM 17 O ALA 2 6.865 33.441 8.447 1.00 5.54 O ATOM 18 N VAL 3 9.094 33.890 8.334 1.00 5.52 N ATOM 20 CA VAL 3 9.203 34.676 9.580 1.00 5.52 C ATOM 21 CB VAL 3 10.214 33.988 10.612 1.00 5.52 C ATOM 22 CG1 VAL 3 11.657 33.926 10.065 1.00 5.52 C ATOM 23 CG2 VAL 3 10.154 34.649 12.000 1.00 5.52 C ATOM 24 C VAL 3 9.569 36.153 9.279 1.00 5.52 C ATOM 25 O VAL 3 10.317 36.427 8.332 1.00 5.52 O ATOM 26 N GLN 4 9.024 37.073 10.089 1.00 4.77 N ATOM 28 CA GLN 4 9.259 38.526 9.976 1.00 4.77 C ATOM 29 CB GLN 4 7.982 39.264 9.538 1.00 4.77 C ATOM 30 CG GLN 4 7.575 39.008 8.093 1.00 4.77 C ATOM 31 CD GLN 4 6.220 39.594 7.757 1.00 4.77 C ATOM 32 OE1 GLN 4 6.115 40.740 7.320 1.00 4.77 O ATOM 33 NE2 GLN 4 5.169 38.805 7.958 1.00 4.77 N ATOM 36 C GLN 4 9.745 39.084 11.317 1.00 4.77 C ATOM 37 O GLN 4 10.634 39.941 11.347 1.00 4.77 O ATOM 38 N GLY 5 9.152 38.591 12.412 1.00 4.59 N ATOM 40 CA GLY 5 9.507 39.024 13.761 1.00 4.59 C ATOM 41 C GLY 5 8.559 40.077 14.339 1.00 4.59 C ATOM 42 O GLY 5 8.849 41.262 14.141 1.00 4.59 O ATOM 43 N PRO 6 7.430 39.721 15.031 1.00 7.29 N ATOM 44 CD PRO 6 6.715 40.836 15.689 1.00 7.29 C ATOM 45 CA PRO 6 6.789 38.444 15.425 1.00 7.29 C ATOM 46 CB PRO 6 5.561 38.913 16.214 1.00 7.29 C ATOM 47 CG PRO 6 6.040 40.152 16.857 1.00 7.29 C ATOM 48 C PRO 6 6.372 37.506 14.271 1.00 7.29 C ATOM 49 O PRO 6 6.504 37.872 13.098 1.00 7.29 O ATOM 50 N TRP 7 5.879 36.311 14.630 1.00 7.78 N ATOM 52 CA TRP 7 5.420 35.272 13.689 1.00 7.78 C ATOM 53 CB TRP 7 5.648 33.869 14.301 1.00 7.78 C ATOM 54 CG TRP 7 7.100 33.513 14.703 1.00 7.78 C ATOM 55 CD2 TRP 7 7.992 32.595 14.035 1.00 7.78 C ATOM 56 CE2 TRP 7 9.196 32.555 14.795 1.00 7.78 C ATOM 57 CE3 TRP 7 7.894 31.798 12.871 1.00 7.78 C ATOM 58 CD1 TRP 7 7.791 33.972 15.806 1.00 7.78 C ATOM 59 NE1 TRP 7 9.038 33.402 15.860 1.00 7.78 N ATOM 61 CZ2 TRP 7 10.301 31.748 14.431 1.00 7.78 C ATOM 62 CZ3 TRP 7 8.999 30.990 12.505 1.00 7.78 C ATOM 63 CH2 TRP 7 10.186 30.977 13.289 1.00 7.78 C ATOM 64 C TRP 7 3.924 35.457 13.368 1.00 7.78 C ATOM 65 O TRP 7 3.104 35.566 14.289 1.00 7.78 O ATOM 66 N VAL 8 3.587 35.513 12.070 1.00 6.44 N ATOM 68 CA VAL 8 2.199 35.686 11.589 1.00 6.44 C ATOM 69 CB VAL 8 2.047 36.883 10.575 1.00 6.44 C ATOM 70 CG1 VAL 8 0.575 37.284 10.446 1.00 6.44 C ATOM 71 CG2 VAL 8 2.882 38.078 11.023 1.00 6.44 C ATOM 72 C VAL 8 1.733 34.367 10.946 1.00 6.44 C ATOM 73 O VAL 8 2.530 33.672 10.318 1.00 6.44 O ATOM 74 N GLY 9 0.455 34.027 11.149 1.00 4.86 N ATOM 76 CA GLY 9 -0.110 32.793 10.618 1.00 4.86 C ATOM 77 C GLY 9 -1.212 32.957 9.585 1.00 4.86 C ATOM 78 O GLY 9 -2.100 32.103 9.501 1.00 4.86 O ATOM 79 N SER 10 -1.145 34.041 8.801 1.00 4.89 N ATOM 81 CA SER 10 -2.119 34.349 7.739 1.00 4.89 C ATOM 82 CB SER 10 -2.534 35.830 7.816 1.00 4.89 C ATOM 83 OG SER 10 -3.573 36.130 6.898 1.00 4.89 O ATOM 85 C SER 10 -1.505 33.968 6.367 1.00 4.89 C ATOM 86 O SER 10 -1.228 32.783 6.145 1.00 4.89 O ATOM 87 N SER 11 -1.300 34.943 5.464 1.00 7.53 N ATOM 89 CA SER 11 -0.700 34.723 4.131 1.00 7.53 C ATOM 90 OG SER 11 -0.381 37.133 3.887 1.00 7.53 O ATOM 92 C SER 11 0.793 34.354 4.241 1.00 7.53 C ATOM 93 O SER 11 1.286 33.504 3.492 1.00 7.53 O ATOM 94 CB SER 11 -0.874 35.964 3.250 1.00 7.53 C ATOM 95 N TYR 12 1.479 35.016 5.184 1.00 9.27 N ATOM 97 CA TYR 12 2.907 34.826 5.499 1.00 9.27 C ATOM 98 CB TYR 12 3.428 35.994 6.377 1.00 9.27 C ATOM 99 CG TYR 12 3.691 37.312 5.640 1.00 9.27 C ATOM 100 CD1 TYR 12 2.678 38.295 5.509 1.00 9.27 C ATOM 101 CE1 TYR 12 2.926 39.529 4.846 1.00 9.27 C ATOM 102 CD2 TYR 12 4.964 37.601 5.087 1.00 9.27 C ATOM 103 CE2 TYR 12 5.220 38.833 4.423 1.00 9.27 C ATOM 104 CZ TYR 12 4.196 39.786 4.309 1.00 9.27 C ATOM 105 OH TYR 12 4.437 40.980 3.667 1.00 9.27 O ATOM 107 C TYR 12 3.217 33.468 6.152 1.00 9.27 C ATOM 108 O TYR 12 4.280 32.888 5.901 1.00 9.27 O ATOM 109 N VAL 13 2.270 32.980 6.976 1.00 6.63 N ATOM 111 CA VAL 13 2.297 31.702 7.748 1.00 6.63 C ATOM 112 CB VAL 13 1.857 30.426 6.875 1.00 6.63 C ATOM 113 CG1 VAL 13 2.906 30.045 5.813 1.00 6.63 C ATOM 114 CG2 VAL 13 1.482 29.233 7.757 1.00 6.63 C ATOM 115 C VAL 13 3.548 31.475 8.644 1.00 6.63 C ATOM 116 O VAL 13 4.681 31.731 8.218 1.00 6.63 O ATOM 117 N ALA 14 3.303 31.009 9.876 1.00 5.95 N ATOM 119 CA ALA 14 4.341 30.771 10.892 1.00 5.95 C ATOM 120 CB ALA 14 3.985 31.526 12.163 1.00 5.95 C ATOM 121 C ALA 14 4.632 29.305 11.233 1.00 5.95 C ATOM 122 O ALA 14 3.708 28.487 11.328 1.00 5.95 O ATOM 123 N GLU 15 5.928 28.995 11.401 1.00 7.05 N ATOM 125 CA GLU 15 6.451 27.660 11.772 1.00 7.05 C ATOM 126 CB GLU 15 7.976 27.603 11.594 1.00 7.05 C ATOM 127 CG GLU 15 8.463 27.505 10.156 1.00 7.05 C ATOM 128 CD GLU 15 9.976 27.451 10.051 1.00 7.05 C ATOM 129 OE1 GLU 15 10.605 28.526 9.945 1.00 7.05 O ATOM 130 OE2 GLU 15 10.537 26.335 10.072 1.00 7.05 O ATOM 131 C GLU 15 6.098 27.299 13.230 1.00 7.05 C ATOM 132 O GLU 15 5.812 26.135 13.535 1.00 7.05 O ATOM 133 N THR 16 6.127 28.320 14.102 1.00 8.48 N ATOM 135 CA THR 16 5.840 28.223 15.552 1.00 8.48 C ATOM 136 CB THR 16 6.276 29.521 16.297 1.00 8.48 C ATOM 137 OG1 THR 16 5.753 30.670 15.617 1.00 8.48 O ATOM 139 CG2 THR 16 7.795 29.617 16.374 1.00 8.48 C ATOM 140 C THR 16 4.379 27.898 15.924 1.00 8.48 C ATOM 141 O THR 16 4.134 27.050 16.792 1.00 8.48 O ATOM 142 N GLY 17 3.435 28.562 15.251 1.00 7.65 N ATOM 144 CA GLY 17 2.015 28.359 15.502 1.00 7.65 C ATOM 145 C GLY 17 1.176 29.137 14.509 1.00 7.65 C ATOM 146 O GLY 17 1.102 30.365 14.601 1.00 7.65 O ATOM 147 N GLN 18 0.546 28.418 13.572 1.00 6.09 N ATOM 149 CA GLN 18 -0.308 28.994 12.517 1.00 6.09 C ATOM 150 CB GLN 18 -0.633 27.910 11.471 1.00 6.09 C ATOM 151 CG GLN 18 -1.166 28.400 10.115 1.00 6.09 C ATOM 152 CD GLN 18 -1.514 27.258 9.176 1.00 6.09 C ATOM 153 OE1 GLN 18 -2.667 26.831 9.103 1.00 6.09 O ATOM 154 NE2 GLN 18 -0.518 26.759 8.452 1.00 6.09 N ATOM 157 C GLN 18 -1.610 29.603 13.084 1.00 6.09 C ATOM 158 O GLN 18 -1.948 30.743 12.752 1.00 6.09 O ATOM 159 N ASN 19 -2.292 28.850 13.960 1.00 7.13 N ATOM 161 CA ASN 19 -3.558 29.260 14.597 1.00 7.13 C ATOM 162 CB ASN 19 -4.256 28.057 15.245 1.00 7.13 C ATOM 163 CG ASN 19 -4.717 27.019 14.227 1.00 7.13 C ATOM 164 OD1 ASN 19 -3.981 26.086 13.895 1.00 7.13 O ATOM 165 ND2 ASN 19 -5.946 27.169 13.741 1.00 7.13 N ATOM 168 C ASN 19 -3.430 30.409 15.612 1.00 7.13 C ATOM 169 O ASN 19 -4.270 31.311 15.619 1.00 7.13 O ATOM 170 N TRP 20 -2.375 30.369 16.442 1.00 5.57 N ATOM 172 CA TRP 20 -2.076 31.388 17.475 1.00 5.57 C ATOM 173 CB TRP 20 -0.960 30.886 18.420 1.00 5.57 C ATOM 174 CG TRP 20 -1.308 29.649 19.284 1.00 5.57 C ATOM 175 CD2 TRP 20 -1.192 28.256 18.918 1.00 5.57 C ATOM 176 CE2 TRP 20 -1.589 27.491 20.053 1.00 5.57 C ATOM 177 CE3 TRP 20 -0.793 27.574 17.744 1.00 5.57 C ATOM 178 CD1 TRP 20 -1.756 29.658 20.585 1.00 5.57 C ATOM 179 NE1 TRP 20 -1.924 28.374 21.043 1.00 5.57 N ATOM 181 CZ2 TRP 20 -1.600 26.074 20.052 1.00 5.57 C ATOM 182 CZ3 TRP 20 -0.803 26.157 17.742 1.00 5.57 C ATOM 183 CH2 TRP 20 -1.206 25.428 18.895 1.00 5.57 C ATOM 184 C TRP 20 -1.667 32.740 16.859 1.00 5.57 C ATOM 185 O TRP 20 -2.146 33.799 17.290 1.00 5.57 O ATOM 186 N ALA 21 -0.810 32.674 15.831 1.00 6.37 N ATOM 188 CA ALA 21 -0.297 33.839 15.091 1.00 6.37 C ATOM 189 CB ALA 21 0.827 33.411 14.179 1.00 6.37 C ATOM 190 C ALA 21 -1.426 34.507 14.289 1.00 6.37 C ATOM 191 O ALA 21 -1.493 35.741 14.212 1.00 6.37 O ATOM 192 N SER 22 -2.300 33.674 13.704 1.00 6.20 N ATOM 194 CA SER 22 -3.477 34.111 12.930 1.00 6.20 C ATOM 195 CB SER 22 -4.098 32.932 12.171 1.00 6.20 C ATOM 196 OG SER 22 -5.117 33.358 11.280 1.00 6.20 O ATOM 198 C SER 22 -4.511 34.736 13.886 1.00 6.20 C ATOM 199 O SER 22 -5.181 35.713 13.528 1.00 6.20 O ATOM 200 N LEU 23 -4.604 34.160 15.099 1.00 5.39 N ATOM 202 CA LEU 23 -5.513 34.584 16.188 1.00 5.39 C ATOM 203 CB LEU 23 -5.375 33.621 17.405 1.00 5.39 C ATOM 204 CG LEU 23 -6.277 33.338 18.648 1.00 5.39 C ATOM 205 CD1 LEU 23 -6.266 34.494 19.660 1.00 5.39 C ATOM 206 CD2 LEU 23 -7.714 32.928 18.282 1.00 5.39 C ATOM 207 C LEU 23 -5.175 36.023 16.599 1.00 5.39 C ATOM 208 O LEU 23 -6.072 36.799 16.934 1.00 5.39 O ATOM 209 N ALA 24 -3.872 36.318 16.655 1.00 6.14 N ATOM 211 CA ALA 24 -3.341 37.643 16.993 1.00 6.14 C ATOM 212 CB ALA 24 -1.864 37.510 17.367 1.00 6.14 C ATOM 213 C ALA 24 -3.523 38.698 15.874 1.00 6.14 C ATOM 214 O ALA 24 -4.020 39.799 16.132 1.00 6.14 O ATOM 215 N ALA 25 -3.114 38.332 14.650 1.00 6.92 N ATOM 217 CA ALA 25 -3.157 39.174 13.436 1.00 6.92 C ATOM 218 CB ALA 25 -2.042 38.751 12.492 1.00 6.92 C ATOM 219 C ALA 25 -4.407 39.527 12.600 1.00 6.92 C ATOM 220 O ALA 25 -4.604 40.699 12.288 1.00 6.92 O ATOM 221 N ASN 26 -5.237 38.530 12.259 1.00 6.44 N ATOM 223 CA ASN 26 -6.407 38.684 11.353 1.00 6.44 C ATOM 224 CB ASN 26 -6.824 37.301 10.829 1.00 6.44 C ATOM 225 CG ASN 26 -5.746 36.632 9.980 1.00 6.44 C ATOM 226 OD1 ASN 26 -4.808 36.026 10.503 1.00 6.44 O ATOM 227 ND2 ASN 26 -5.894 36.718 8.663 1.00 6.44 N ATOM 230 C ASN 26 -7.687 39.512 11.598 1.00 6.44 C ATOM 231 O ASN 26 -8.091 40.259 10.699 1.00 6.44 O ATOM 232 N GLU 27 -8.315 39.391 12.780 1.00 7.83 N ATOM 234 CA GLU 27 -9.585 40.075 13.185 1.00 7.83 C ATOM 235 CG GLU 27 -10.214 42.327 14.354 1.00 7.83 C ATOM 236 CD GLU 27 -10.091 43.839 14.302 1.00 7.83 C ATOM 237 OE1 GLU 27 -9.252 44.393 15.041 1.00 7.83 O ATOM 238 OE2 GLU 27 -10.841 44.475 13.530 1.00 7.83 O ATOM 239 C GLU 27 -10.865 39.669 12.398 1.00 7.83 C ATOM 240 O GLU 27 -11.980 40.017 12.816 1.00 7.83 O ATOM 241 CB GLU 27 -9.437 41.620 13.227 1.00 7.83 C ATOM 242 N LEU 28 -10.701 38.906 11.305 1.00 7.51 N ATOM 244 CA LEU 28 -11.816 38.436 10.448 1.00 7.51 C ATOM 245 CB LEU 28 -11.289 37.933 9.074 1.00 7.51 C ATOM 246 CG LEU 28 -10.120 36.955 8.798 1.00 7.51 C ATOM 247 CD1 LEU 28 -10.559 35.484 8.844 1.00 7.51 C ATOM 248 CD2 LEU 28 -9.555 37.263 7.422 1.00 7.51 C ATOM 249 C LEU 28 -12.710 37.376 11.140 1.00 7.51 C ATOM 250 O LEU 28 -13.915 37.594 11.315 1.00 7.51 O ATOM 251 N ARG 29 -12.089 36.250 11.514 1.00 8.44 N ATOM 253 CA ARG 29 -12.716 35.116 12.220 1.00 8.44 C ATOM 254 CB ARG 29 -12.848 33.885 11.303 1.00 8.44 C ATOM 255 CG ARG 29 -13.862 34.033 10.173 1.00 8.44 C ATOM 256 CD ARG 29 -13.927 32.776 9.321 1.00 8.44 C ATOM 257 NE ARG 29 -14.896 32.900 8.230 1.00 8.44 N ATOM 259 CZ ARG 29 -15.161 31.954 7.328 1.00 8.44 C ATOM 260 NH1 ARG 29 -16.063 32.186 6.383 1.00 8.44 N ATOM 263 NH2 ARG 29 -14.538 30.780 7.357 1.00 8.44 N ATOM 266 C ARG 29 -11.740 34.808 13.360 1.00 8.44 C ATOM 267 O ARG 29 -12.125 34.248 14.395 1.00 8.44 O ATOM 268 N VAL 30 -10.477 35.207 13.142 1.00 8.44 N ATOM 270 CA VAL 30 -9.349 35.040 14.076 1.00 8.44 C ATOM 271 CB VAL 30 -8.159 34.216 13.436 1.00 8.44 C ATOM 272 CG1 VAL 30 -8.139 32.809 14.012 1.00 8.44 C ATOM 273 CG2 VAL 30 -8.274 34.143 11.910 1.00 8.44 C ATOM 274 C VAL 30 -8.874 36.415 14.621 1.00 8.44 C ATOM 275 O VAL 30 -8.100 37.124 13.968 1.00 8.44 O ATOM 276 N THR 31 -9.400 36.766 15.806 1.00 6.47 N ATOM 278 CA THR 31 -9.177 38.009 16.603 1.00 6.47 C ATOM 279 CB THR 31 -9.170 37.665 18.124 1.00 6.47 C ATOM 280 OG1 THR 31 -8.307 36.548 18.365 1.00 6.47 O ATOM 282 CG2 THR 31 -10.578 37.341 18.613 1.00 6.47 C ATOM 283 C THR 31 -8.031 39.035 16.345 1.00 6.47 C ATOM 284 O THR 31 -7.039 38.720 15.681 1.00 6.47 O ATOM 285 N GLU 32 -8.223 40.266 16.864 1.00 6.59 N ATOM 287 CA GLU 32 -7.306 41.444 16.811 1.00 6.59 C ATOM 288 CB GLU 32 -6.236 41.370 17.920 1.00 6.59 C ATOM 289 CG GLU 32 -6.775 41.530 19.338 1.00 6.59 C ATOM 290 CD GLU 32 -5.686 41.450 20.392 1.00 6.59 C ATOM 291 OE1 GLU 32 -5.114 42.505 20.740 1.00 6.59 O ATOM 292 OE2 GLU 32 -5.403 40.333 20.875 1.00 6.59 O ATOM 293 C GLU 32 -6.644 41.891 15.491 1.00 6.59 C ATOM 294 O GLU 32 -6.133 41.059 14.732 1.00 6.59 O ATOM 295 N ARG 33 -6.651 43.220 15.259 1.00 6.97 N ATOM 297 CA ARG 33 -6.080 43.952 14.086 1.00 6.97 C ATOM 298 CB ARG 33 -4.566 44.201 14.258 1.00 6.97 C ATOM 299 CG ARG 33 -4.209 45.257 15.301 1.00 6.97 C ATOM 300 CD ARG 33 -2.788 45.784 15.111 1.00 6.97 C ATOM 301 NE ARG 33 -2.661 46.632 13.920 1.00 6.97 N ATOM 303 CZ ARG 33 -1.538 47.226 13.514 1.00 6.97 C ATOM 304 NH1 ARG 33 -1.555 47.970 12.416 1.00 6.97 N ATOM 307 NH2 ARG 33 -0.400 47.086 14.187 1.00 6.97 N ATOM 310 C ARG 33 -6.333 43.422 12.650 1.00 6.97 C ATOM 311 O ARG 33 -6.457 42.209 12.475 1.00 6.97 O ATOM 312 N PRO 34 -6.448 44.319 11.609 1.00 7.56 N ATOM 313 CD PRO 34 -6.613 45.793 11.630 1.00 7.56 C ATOM 314 CA PRO 34 -6.673 43.825 10.229 1.00 7.56 C ATOM 315 CB PRO 34 -6.806 45.117 9.422 1.00 7.56 C ATOM 316 CG PRO 34 -7.438 46.046 10.391 1.00 7.56 C ATOM 317 C PRO 34 -5.463 42.982 9.765 1.00 7.56 C ATOM 318 O PRO 34 -4.323 43.326 10.097 1.00 7.56 O ATOM 319 N PHE 35 -5.710 41.920 8.988 1.00 7.18 N ATOM 321 CA PHE 35 -4.661 40.984 8.532 1.00 7.18 C ATOM 322 CB PHE 35 -5.284 39.744 7.842 1.00 7.18 C ATOM 323 CG PHE 35 -6.272 40.055 6.708 1.00 7.18 C ATOM 324 CD1 PHE 35 -7.643 40.280 6.979 1.00 7.18 C ATOM 325 CD2 PHE 35 -5.838 40.089 5.361 1.00 7.18 C ATOM 326 CE1 PHE 35 -8.568 40.534 5.930 1.00 7.18 C ATOM 327 CE2 PHE 35 -6.751 40.342 4.300 1.00 7.18 C ATOM 328 CZ PHE 35 -8.120 40.565 4.586 1.00 7.18 C ATOM 329 C PHE 35 -3.456 41.476 7.713 1.00 7.18 C ATOM 330 O PHE 35 -2.330 41.124 8.051 1.00 7.18 O ATOM 331 N TRP 36 -3.683 42.310 6.691 1.00 5.97 N ATOM 333 CA TRP 36 -2.613 42.833 5.814 1.00 5.97 C ATOM 334 CB TRP 36 -3.244 43.578 4.614 1.00 5.97 C ATOM 335 CG TRP 36 -2.373 43.712 3.331 1.00 5.97 C ATOM 336 CD2 TRP 36 -1.420 44.754 3.019 1.00 5.97 C ATOM 337 CE2 TRP 36 -0.901 44.471 1.724 1.00 5.97 C ATOM 338 CE3 TRP 36 -0.952 45.900 3.705 1.00 5.97 C ATOM 339 CD1 TRP 36 -2.383 42.874 2.239 1.00 5.97 C ATOM 340 NE1 TRP 36 -1.507 43.325 1.282 1.00 5.97 N ATOM 342 CZ2 TRP 36 0.066 45.291 1.093 1.00 5.97 C ATOM 343 CZ3 TRP 36 0.016 46.722 3.076 1.00 5.97 C ATOM 344 CH2 TRP 36 0.511 46.406 1.779 1.00 5.97 C ATOM 345 C TRP 36 -1.604 43.739 6.562 1.00 5.97 C ATOM 346 O TRP 36 -0.384 43.551 6.436 1.00 5.97 O ATOM 347 N ILE 37 -2.132 44.670 7.371 1.00 7.06 N ATOM 349 CA ILE 37 -1.344 45.629 8.178 1.00 7.06 C ATOM 350 CB ILE 37 -2.244 46.793 8.746 1.00 7.06 C ATOM 351 CG2 ILE 37 -1.359 47.983 9.223 1.00 7.06 C ATOM 352 CG1 ILE 37 -3.199 47.317 7.655 1.00 7.06 C ATOM 353 CD1 ILE 37 -4.569 47.804 8.155 1.00 7.06 C ATOM 354 C ILE 37 -0.601 44.909 9.329 1.00 7.06 C ATOM 355 O ILE 37 0.601 45.129 9.517 1.00 7.06 O ATOM 356 N SER 38 -1.312 44.017 10.038 1.00 6.52 N ATOM 358 CA SER 38 -0.775 43.241 11.174 1.00 6.52 C ATOM 359 CB SER 38 -1.903 42.512 11.913 1.00 6.52 C ATOM 360 OG SER 38 -2.548 41.570 11.072 1.00 6.52 O ATOM 362 C SER 38 0.300 42.234 10.742 1.00 6.52 C ATOM 363 O SER 38 1.255 42.004 11.483 1.00 6.52 O ATOM 364 N SER 39 0.112 41.628 9.560 1.00 4.96 N ATOM 366 CA SER 39 1.049 40.651 8.975 1.00 4.96 C ATOM 367 CB SER 39 0.401 39.900 7.812 1.00 4.96 C ATOM 368 OG SER 39 -0.673 39.085 8.249 1.00 4.96 O ATOM 370 C SER 39 2.373 41.284 8.532 1.00 4.96 C ATOM 371 O SER 39 3.436 40.678 8.704 1.00 4.96 O ATOM 372 N PHE 40 2.293 42.505 7.982 1.00 5.28 N ATOM 374 CA PHE 40 3.463 43.281 7.526 1.00 5.28 C ATOM 375 CB PHE 40 2.998 44.515 6.705 1.00 5.28 C ATOM 376 CG PHE 40 4.092 45.184 5.863 1.00 5.28 C ATOM 377 CD1 PHE 40 4.834 46.275 6.377 1.00 5.28 C ATOM 378 CD2 PHE 40 4.359 44.750 4.541 1.00 5.28 C ATOM 379 CE1 PHE 40 5.826 46.924 5.591 1.00 5.28 C ATOM 380 CE2 PHE 40 5.348 45.389 3.746 1.00 5.28 C ATOM 381 CZ PHE 40 6.083 46.479 4.272 1.00 5.28 C ATOM 382 C PHE 40 4.286 43.699 8.767 1.00 5.28 C ATOM 383 O PHE 40 5.515 43.573 8.765 1.00 5.28 O ATOM 384 N ILE 41 3.588 44.200 9.798 1.00 6.19 N ATOM 386 CA ILE 41 4.174 44.624 11.091 1.00 6.19 C ATOM 387 CB ILE 41 3.169 45.521 11.924 1.00 6.19 C ATOM 388 CG2 ILE 41 3.810 45.960 13.281 1.00 6.19 C ATOM 389 CG1 ILE 41 2.800 46.783 11.119 1.00 6.19 C ATOM 390 CD1 ILE 41 1.456 47.444 11.488 1.00 6.19 C ATOM 391 C ILE 41 4.639 43.399 11.917 1.00 6.19 C ATOM 392 O ILE 41 5.740 43.404 12.477 1.00 6.19 O ATOM 393 N GLY 42 3.782 42.372 11.966 1.00 5.24 N ATOM 395 CA GLY 42 4.053 41.148 12.710 1.00 5.24 C ATOM 396 C GLY 42 3.135 40.985 13.913 1.00 5.24 C ATOM 397 O GLY 42 3.578 41.176 15.049 1.00 5.24 O ATOM 398 N ARG 43 1.863 40.632 13.652 1.00 5.50 N ATOM 400 CA ARG 43 0.765 40.408 14.640 1.00 5.50 C ATOM 401 CB ARG 43 0.638 38.895 15.024 1.00 5.50 C ATOM 402 CG ARG 43 1.923 38.181 15.535 1.00 5.50 C ATOM 403 CD ARG 43 1.853 37.727 16.998 1.00 5.50 C ATOM 404 NE ARG 43 1.086 36.492 17.172 1.00 5.50 N ATOM 406 CZ ARG 43 1.128 35.711 18.253 1.00 5.50 C ATOM 407 NH1 ARG 43 1.903 36.014 19.290 1.00 5.50 N ATOM 410 NH2 ARG 43 0.382 34.617 18.300 1.00 5.50 N ATOM 413 C ARG 43 0.629 41.325 15.895 1.00 5.50 C ATOM 414 O ARG 43 -0.243 41.096 16.747 1.00 5.50 O ATOM 415 N SER 44 1.455 42.380 15.959 1.00 5.52 N ATOM 417 CA SER 44 1.484 43.349 17.070 1.00 5.52 C ATOM 418 CB SER 44 2.928 43.530 17.569 1.00 5.52 C ATOM 419 OG SER 44 3.805 43.883 16.512 1.00 5.52 O ATOM 421 C SER 44 0.874 44.710 16.679 1.00 5.52 C ATOM 422 O SER 44 0.619 44.951 15.494 1.00 5.52 O ATOM 423 N LYS 45 0.650 45.575 17.680 1.00 5.96 N ATOM 425 CA LYS 45 0.073 46.924 17.504 1.00 5.96 C ATOM 426 CG LYS 45 -2.122 46.441 18.774 1.00 5.96 C ATOM 427 CD LYS 45 -2.969 46.857 19.965 1.00 5.96 C ATOM 428 CE LYS 45 -4.240 46.028 20.058 1.00 5.96 C ATOM 429 NZ LYS 45 -5.080 46.424 21.221 1.00 5.96 N ATOM 433 C LYS 45 1.154 48.009 17.355 1.00 5.96 C ATOM 434 O LYS 45 0.975 48.960 16.585 1.00 5.96 O ATOM 435 CB LYS 45 -0.848 47.274 18.682 1.00 5.96 C TER END