####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS492_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS492_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 4 - 23 4.95 13.42 LCS_AVERAGE: 41.58 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 7 - 17 1.77 11.61 LCS_AVERAGE: 18.29 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 8 - 17 0.67 12.08 LCS_AVERAGE: 13.95 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 19 3 3 5 9 11 14 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT V 3 V 3 4 6 19 3 4 5 6 8 9 16 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT Q 4 Q 4 4 6 20 3 4 5 6 10 13 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT G 5 G 5 4 6 20 2 4 5 6 10 13 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT P 6 P 6 4 6 20 4 4 5 6 11 14 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT W 7 W 7 4 11 20 4 4 4 8 10 14 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT V 8 V 8 10 11 20 7 9 10 10 10 11 12 15 18 23 27 28 29 31 34 36 37 38 39 40 LCS_GDT G 9 G 9 10 11 20 7 9 10 10 11 13 15 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT S 10 S 10 10 11 20 7 9 10 10 11 14 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT S 11 S 11 10 11 20 7 9 10 10 11 14 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT Y 12 Y 12 10 11 20 7 9 10 10 11 14 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT V 13 V 13 10 11 20 7 9 10 10 11 14 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT A 14 A 14 10 11 20 7 9 10 10 11 14 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT E 15 E 15 10 11 20 7 9 10 10 11 13 14 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT T 16 T 16 10 11 20 4 9 10 10 11 13 13 15 22 23 27 28 28 29 32 35 37 38 39 40 LCS_GDT G 17 G 17 10 11 20 4 9 10 10 11 13 15 19 22 23 27 28 28 31 32 36 37 38 39 40 LCS_GDT Q 18 Q 18 4 5 20 3 3 6 7 9 11 16 18 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT N 19 N 19 4 5 20 3 3 4 5 9 9 10 12 15 17 21 24 29 32 34 36 37 38 39 40 LCS_GDT W 20 W 20 8 9 20 7 8 8 8 9 9 10 12 15 17 21 24 29 32 34 36 37 38 39 40 LCS_GDT A 21 A 21 8 9 20 7 8 8 8 8 8 8 12 14 17 20 23 27 32 34 36 37 38 39 40 LCS_GDT S 22 S 22 8 9 20 7 8 8 8 8 8 9 10 12 13 15 17 20 21 24 29 37 38 39 40 LCS_GDT L 23 L 23 8 9 20 7 8 8 8 8 8 10 12 15 17 20 24 29 32 34 36 37 38 39 40 LCS_GDT A 24 A 24 8 9 18 7 8 8 8 8 8 8 12 14 17 20 23 27 32 34 36 37 38 39 40 LCS_GDT A 25 A 25 8 9 18 7 8 8 8 8 8 8 10 10 12 13 15 19 21 24 25 32 35 39 40 LCS_GDT N 26 N 26 8 9 18 7 8 8 8 8 8 9 12 13 14 17 19 23 28 33 36 37 38 39 40 LCS_GDT E 27 E 27 8 9 18 7 8 8 8 8 8 8 12 14 17 20 23 27 32 34 36 37 38 39 40 LCS_GDT L 28 L 28 3 9 18 3 3 4 6 7 8 9 12 14 17 20 23 27 32 34 36 37 38 39 40 LCS_GDT R 29 R 29 4 6 18 3 4 4 6 9 11 16 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT V 30 V 30 4 6 18 3 4 4 6 9 14 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT T 31 T 31 4 6 18 4 5 6 8 10 14 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT E 32 E 32 4 6 18 4 4 5 6 8 14 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT R 33 R 33 3 6 18 3 5 6 8 10 14 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT P 34 P 34 3 5 18 4 5 6 8 10 14 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT F 35 F 35 3 7 18 3 3 6 8 10 14 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT W 36 W 36 5 7 18 3 4 6 7 9 13 17 19 22 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT I 37 I 37 5 7 15 4 4 6 7 9 9 13 14 20 23 27 28 29 32 34 36 37 38 39 40 LCS_GDT S 38 S 38 5 7 15 4 4 6 7 9 10 13 14 16 21 25 27 29 32 34 36 37 38 39 40 LCS_GDT S 39 S 39 5 7 15 4 4 6 7 9 10 13 15 19 22 26 28 29 32 34 36 37 38 39 40 LCS_GDT F 40 F 40 5 7 15 4 4 6 7 9 10 13 15 19 22 27 28 29 32 34 36 37 38 39 40 LCS_GDT I 41 I 41 5 7 15 3 4 6 7 9 9 10 13 14 17 19 20 22 24 27 32 34 38 39 40 LCS_GDT G 42 G 42 4 7 15 3 4 4 7 9 9 10 13 13 15 18 19 22 24 26 28 30 32 35 38 LCS_GDT R 43 R 43 4 7 15 3 4 4 5 7 8 10 13 13 13 14 19 21 24 25 27 28 31 32 35 LCS_GDT S 44 S 44 4 7 14 3 4 4 5 7 8 10 13 13 13 14 15 17 18 19 21 22 25 28 29 LCS_GDT K 45 K 45 4 7 14 3 4 4 5 7 8 10 13 13 13 14 15 15 18 18 19 19 25 28 29 LCS_AVERAGE LCS_A: 24.60 ( 13.95 18.29 41.58 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 9 10 10 11 14 17 19 22 23 27 28 29 32 34 36 37 38 39 40 GDT PERCENT_AT 15.91 20.45 22.73 22.73 25.00 31.82 38.64 43.18 50.00 52.27 61.36 63.64 65.91 72.73 77.27 81.82 84.09 86.36 88.64 90.91 GDT RMS_LOCAL 0.32 0.52 0.67 0.67 1.68 2.37 2.59 2.76 3.05 3.15 3.70 3.83 4.57 5.21 5.30 5.52 5.60 5.80 5.98 6.18 GDT RMS_ALL_AT 23.35 12.38 12.08 12.08 11.51 9.80 10.02 9.96 9.77 9.82 9.51 9.43 8.84 8.74 8.70 8.70 8.69 8.66 8.69 8.58 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 3.285 0 0.354 0.383 5.576 7.273 8.000 - LGA V 3 V 3 4.803 0 0.536 0.577 9.233 22.727 12.987 8.367 LGA Q 4 Q 4 2.692 0 0.469 0.644 7.878 18.636 12.525 6.387 LGA G 5 G 5 3.473 0 0.162 0.162 3.473 33.636 33.636 - LGA P 6 P 6 1.931 0 0.682 0.612 3.421 39.545 34.286 2.521 LGA W 7 W 7 2.189 0 0.497 1.118 5.695 48.182 14.026 5.363 LGA V 8 V 8 5.550 0 0.547 0.625 10.333 4.545 2.597 10.333 LGA G 9 G 9 3.686 0 0.221 0.221 3.900 24.545 24.545 - LGA S 10 S 10 1.435 0 0.033 0.562 4.549 62.727 48.485 4.549 LGA S 11 S 11 1.993 0 0.060 0.665 5.013 41.818 32.424 5.013 LGA Y 12 Y 12 3.318 0 0.047 0.207 4.588 22.727 11.515 4.586 LGA V 13 V 13 2.016 0 0.047 0.067 3.051 33.182 43.117 2.042 LGA A 14 A 14 2.599 0 0.139 0.136 4.020 25.455 28.000 - LGA E 15 E 15 4.433 0 0.037 0.811 9.506 5.909 3.232 9.506 LGA T 16 T 16 4.964 0 0.248 0.262 5.350 1.364 4.156 3.073 LGA G 17 G 17 4.050 0 0.668 0.668 6.307 4.091 4.091 - LGA Q 18 Q 18 7.011 0 0.582 0.532 9.864 0.455 0.202 8.571 LGA N 19 N 19 12.227 0 0.017 1.405 15.867 0.000 0.000 15.867 LGA W 20 W 20 12.509 0 0.618 1.261 18.411 0.000 0.000 18.411 LGA A 21 A 21 14.100 0 0.018 0.026 15.607 0.000 0.000 - LGA S 22 S 22 16.030 0 0.028 0.611 17.706 0.000 0.000 17.706 LGA L 23 L 23 13.757 0 0.090 1.207 16.896 0.000 0.000 16.896 LGA A 24 A 24 12.569 0 0.028 0.039 13.016 0.000 0.000 - LGA A 25 A 25 14.471 0 0.042 0.042 15.875 0.000 0.000 - LGA N 26 N 26 14.452 0 0.362 0.298 18.299 0.000 0.000 18.146 LGA E 27 E 27 13.318 0 0.323 1.265 19.671 0.000 0.000 19.671 LGA L 28 L 28 9.331 0 0.654 0.544 12.232 0.000 0.000 12.221 LGA R 29 R 29 5.140 0 0.572 1.391 13.620 7.273 2.645 12.018 LGA V 30 V 30 2.909 0 0.103 1.066 6.471 19.091 11.688 6.471 LGA T 31 T 31 2.403 0 0.700 0.790 5.757 33.182 19.481 4.828 LGA E 32 E 32 3.266 0 0.589 1.342 9.113 39.545 17.576 9.113 LGA R 33 R 33 1.469 0 0.085 1.314 11.760 39.091 14.711 11.760 LGA P 34 P 34 1.377 0 0.589 0.594 4.554 39.091 44.416 1.390 LGA F 35 F 35 2.692 0 0.649 0.552 10.017 60.455 21.983 10.017 LGA W 36 W 36 3.490 0 0.591 1.278 14.681 19.545 5.584 14.681 LGA I 37 I 37 6.359 0 0.075 0.344 10.230 0.000 0.000 8.999 LGA S 38 S 38 9.644 0 0.150 0.162 10.982 0.000 0.000 9.620 LGA S 39 S 39 7.471 0 0.061 0.074 7.715 0.000 0.303 4.761 LGA F 40 F 40 6.258 0 0.172 0.307 9.299 0.000 20.496 3.206 LGA I 41 I 41 12.677 0 0.636 0.634 17.055 0.000 0.000 15.473 LGA G 42 G 42 17.116 0 0.652 0.652 19.027 0.000 0.000 - LGA R 43 R 43 18.006 0 0.020 1.517 19.484 0.000 0.000 16.361 LGA S 44 S 44 23.289 0 0.271 0.703 26.765 0.000 0.000 26.765 LGA K 45 K 45 26.512 0 0.086 0.959 31.608 0.000 0.000 31.366 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.165 8.069 9.131 14.866 10.834 4.987 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 19 2.76 42.045 36.230 0.664 LGA_LOCAL RMSD: 2.761 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.957 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.165 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.379492 * X + -0.905663 * Y + -0.189105 * Z + 8.840086 Y_new = -0.527553 * X + -0.379732 * Y + 0.759928 * Z + 48.429295 Z_new = -0.760048 * X + -0.188624 * Y + -0.621891 * Z + 9.742358 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.947205 0.863387 -2.847105 [DEG: -54.2709 49.4684 -163.1271 ] ZXZ: -2.897700 2.241951 -1.814055 [DEG: -166.0260 128.4543 -103.9377 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS492_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS492_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 19 2.76 36.230 8.17 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS492_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 REFINED PARENT N/A ATOM 9 N ALA 2 9.635 39.928 15.025 1.00 9.00 ATOM 10 CA ALA 2 9.230 39.250 13.772 1.00 9.00 ATOM 11 C ALA 2 9.749 39.880 12.455 1.00 9.00 ATOM 12 O ALA 2 9.047 40.634 11.782 1.00 9.00 ATOM 13 CB ALA 2 7.714 38.988 13.781 1.00 9.10 ATOM 14 N VAL 3 10.992 39.537 12.080 1.00 8.60 ATOM 15 CA VAL 3 11.576 39.818 10.744 1.00 8.60 ATOM 16 C VAL 3 11.147 38.730 9.747 1.00 8.60 ATOM 17 O VAL 3 10.442 38.997 8.774 1.00 8.60 ATOM 18 CB VAL 3 13.123 39.878 10.803 1.00 8.70 ATOM 19 CG1 VAL 3 13.752 40.104 9.427 1.00 8.70 ATOM 20 CG2 VAL 3 13.651 40.998 11.693 1.00 8.70 ATOM 21 N GLN 4 11.596 37.500 10.031 1.00 8.80 ATOM 22 CA GLN 4 11.514 36.278 9.223 1.00 8.80 ATOM 23 C GLN 4 12.035 36.418 7.779 1.00 8.80 ATOM 24 O GLN 4 13.210 36.131 7.535 1.00 8.80 ATOM 25 CB GLN 4 10.149 35.582 9.370 1.00 9.00 ATOM 26 CG GLN 4 9.825 35.329 10.861 1.00 9.00 ATOM 27 CD GLN 4 8.947 34.109 11.140 1.00 9.00 ATOM 28 OE1 GLN 4 8.610 33.305 10.282 1.00 9.00 ATOM 29 NE2 GLN 4 8.552 33.912 12.380 1.00 9.00 ATOM 30 N GLY 5 11.204 36.829 6.816 1.00 9.00 ATOM 31 CA GLY 5 11.583 36.846 5.396 1.00 9.00 ATOM 32 C GLY 5 10.434 37.164 4.424 1.00 9.00 ATOM 33 O GLY 5 9.489 37.864 4.800 1.00 9.00 ATOM 34 N PRO 6 10.506 36.667 3.170 1.00 9.00 ATOM 35 CA PRO 6 9.443 36.792 2.168 1.00 9.00 ATOM 36 C PRO 6 8.125 36.112 2.580 1.00 9.00 ATOM 37 O PRO 6 8.106 35.250 3.459 1.00 9.00 ATOM 38 CB PRO 6 10.004 36.161 0.885 1.00 9.30 ATOM 39 CG PRO 6 11.518 36.201 1.080 1.00 9.30 ATOM 40 CD PRO 6 11.655 35.987 2.583 1.00 9.30 ATOM 41 N TRP 7 7.020 36.458 1.910 1.00 8.20 ATOM 42 CA TRP 7 5.688 35.906 2.213 1.00 8.20 ATOM 43 C TRP 7 5.570 34.388 1.974 1.00 8.20 ATOM 44 O TRP 7 5.028 33.688 2.821 1.00 8.20 ATOM 45 CB TRP 7 4.627 36.665 1.395 1.00 7.30 ATOM 46 CG TRP 7 4.495 36.296 -0.061 1.00 7.30 ATOM 47 CD1 TRP 7 5.388 36.580 -1.039 1.00 7.30 ATOM 48 CD2 TRP 7 3.420 35.547 -0.720 1.00 7.30 ATOM 49 NE1 TRP 7 4.955 36.053 -2.240 1.00 7.30 ATOM 50 CE2 TRP 7 3.745 35.409 -2.105 1.00 7.30 ATOM 51 CE3 TRP 7 2.190 34.994 -0.296 1.00 7.30 ATOM 52 CZ2 TRP 7 2.904 34.754 -3.017 1.00 7.30 ATOM 53 CZ3 TRP 7 1.331 34.342 -1.206 1.00 7.30 ATOM 54 CH2 TRP 7 1.686 34.219 -2.562 1.00 7.30 ATOM 55 N VAL 8 6.094 33.902 0.840 1.00 9.30 ATOM 56 CA VAL 8 5.919 32.564 0.225 1.00 9.30 ATOM 57 C VAL 8 5.411 31.452 1.168 1.00 9.30 ATOM 58 O VAL 8 6.192 30.744 1.807 1.00 9.30 ATOM 59 CB VAL 8 7.202 32.125 -0.523 1.00 9.70 ATOM 60 CG1 VAL 8 6.904 30.956 -1.473 1.00 9.70 ATOM 61 CG2 VAL 8 7.819 33.247 -1.373 1.00 9.70 ATOM 62 N GLY 9 4.082 31.281 1.219 1.00 9.60 ATOM 63 CA GLY 9 3.387 30.175 1.896 1.00 9.60 ATOM 64 C GLY 9 3.789 29.972 3.363 1.00 9.60 ATOM 65 O GLY 9 3.476 30.784 4.232 1.00 9.60 ATOM 66 N SER 10 4.494 28.877 3.653 1.00 9.50 ATOM 67 CA SER 10 4.928 28.509 5.013 1.00 9.50 ATOM 68 C SER 10 5.754 29.597 5.715 1.00 9.50 ATOM 69 O SER 10 5.723 29.684 6.945 1.00 9.50 ATOM 70 CB SER 10 5.748 27.215 4.973 1.00 10.10 ATOM 71 OG SER 10 5.010 26.176 4.340 1.00 10.10 ATOM 72 N SER 11 6.438 30.469 4.964 1.00 8.90 ATOM 73 CA SER 11 7.161 31.618 5.521 1.00 8.90 ATOM 74 C SER 11 6.231 32.645 6.185 1.00 8.90 ATOM 75 O SER 11 6.639 33.259 7.173 1.00 8.90 ATOM 76 CB SER 11 8.023 32.289 4.447 1.00 9.50 ATOM 77 OG SER 11 8.978 31.367 3.938 1.00 9.50 ATOM 78 N TYR 12 4.976 32.803 5.728 1.00 7.70 ATOM 79 CA TYR 12 3.975 33.576 6.474 1.00 7.70 ATOM 80 C TYR 12 3.382 32.763 7.633 1.00 7.70 ATOM 81 O TYR 12 3.181 33.319 8.707 1.00 7.70 ATOM 82 CB TYR 12 2.911 34.226 5.566 1.00 8.40 ATOM 83 CG TYR 12 1.893 33.370 4.818 1.00 8.40 ATOM 84 CD1 TYR 12 0.878 32.681 5.513 1.00 8.40 ATOM 85 CD2 TYR 12 1.870 33.383 3.407 1.00 8.40 ATOM 86 CE1 TYR 12 -0.106 31.960 4.808 1.00 8.40 ATOM 87 CE2 TYR 12 0.874 32.685 2.697 1.00 8.40 ATOM 88 CZ TYR 12 -0.112 31.958 3.396 1.00 8.40 ATOM 89 OH TYR 12 -1.075 31.290 2.701 1.00 8.40 ATOM 90 N VAL 13 3.164 31.451 7.484 1.00 7.00 ATOM 91 CA VAL 13 2.591 30.601 8.555 1.00 7.00 ATOM 92 C VAL 13 3.488 30.547 9.803 1.00 7.00 ATOM 93 O VAL 13 2.991 30.604 10.928 1.00 7.00 ATOM 94 CB VAL 13 2.291 29.178 8.043 1.00 7.60 ATOM 95 CG1 VAL 13 1.669 28.289 9.128 1.00 7.60 ATOM 96 CG2 VAL 13 1.319 29.206 6.857 1.00 7.60 ATOM 97 N ALA 14 4.813 30.503 9.628 1.00 6.80 ATOM 98 CA ALA 14 5.780 30.594 10.726 1.00 6.80 ATOM 99 C ALA 14 5.815 31.985 11.409 1.00 6.80 ATOM 100 O ALA 14 6.347 32.121 12.512 1.00 6.80 ATOM 101 CB ALA 14 7.156 30.205 10.174 1.00 7.10 ATOM 102 N GLU 15 5.250 33.014 10.767 1.00 6.10 ATOM 103 CA GLU 15 5.072 34.373 11.293 1.00 6.10 ATOM 104 C GLU 15 3.674 34.579 11.920 1.00 6.10 ATOM 105 O GLU 15 3.552 35.361 12.867 1.00 6.10 ATOM 106 CB GLU 15 5.420 35.361 10.160 1.00 7.20 ATOM 107 CG GLU 15 5.135 36.849 10.425 1.00 7.20 ATOM 108 CD GLU 15 5.694 37.767 9.311 1.00 7.20 ATOM 109 OE1 GLU 15 6.653 37.390 8.600 1.00 7.20 ATOM 110 OE2 GLU 15 5.174 38.895 9.134 1.00 7.20 ATOM 111 N THR 16 2.641 33.845 11.480 1.00 5.80 ATOM 112 CA THR 16 1.317 33.821 12.130 1.00 5.80 ATOM 113 C THR 16 1.316 32.986 13.420 1.00 5.80 ATOM 114 O THR 16 1.102 33.524 14.510 1.00 5.80 ATOM 115 CB THR 16 0.174 33.365 11.192 1.00 6.20 ATOM 116 OG1 THR 16 0.243 31.996 10.856 1.00 6.20 ATOM 117 CG2 THR 16 0.124 34.101 9.857 1.00 6.20 ATOM 118 N GLY 17 1.572 31.680 13.316 1.00 5.80 ATOM 119 CA GLY 17 1.616 30.722 14.423 1.00 5.80 ATOM 120 C GLY 17 3.000 30.635 15.068 1.00 5.80 ATOM 121 O GLY 17 4.002 30.976 14.439 1.00 5.80 ATOM 122 N GLN 18 3.055 30.183 16.329 1.00 5.70 ATOM 123 CA GLN 18 4.227 30.170 17.233 1.00 5.70 ATOM 124 C GLN 18 4.769 31.572 17.582 1.00 5.70 ATOM 125 O GLN 18 4.872 31.936 18.751 1.00 5.70 ATOM 126 CB GLN 18 5.346 29.247 16.698 1.00 6.70 ATOM 127 CG GLN 18 4.890 27.846 16.248 1.00 6.70 ATOM 128 CD GLN 18 4.238 27.010 17.352 1.00 6.70 ATOM 129 OE1 GLN 18 4.514 27.143 18.539 1.00 6.70 ATOM 130 NE2 GLN 18 3.352 26.100 17.005 1.00 6.70 ATOM 131 N ASN 19 5.056 32.388 16.568 1.00 5.20 ATOM 132 CA ASN 19 5.615 33.733 16.670 1.00 5.20 ATOM 133 C ASN 19 4.734 34.721 17.463 1.00 5.20 ATOM 134 O ASN 19 5.277 35.597 18.135 1.00 5.20 ATOM 135 CB ASN 19 5.886 34.189 15.227 1.00 5.60 ATOM 136 CG ASN 19 6.341 35.630 15.136 1.00 5.60 ATOM 137 OD1 ASN 19 7.437 35.984 15.542 1.00 5.60 ATOM 138 ND2 ASN 19 5.519 36.496 14.588 1.00 5.60 ATOM 139 N TRP 20 3.402 34.571 17.476 1.00 5.30 ATOM 140 CA TRP 20 2.530 35.410 18.322 1.00 5.30 ATOM 141 C TRP 20 2.854 35.240 19.820 1.00 5.30 ATOM 142 O TRP 20 2.889 36.219 20.567 1.00 5.30 ATOM 143 CB TRP 20 1.048 35.117 18.024 1.00 5.90 ATOM 144 CG TRP 20 0.457 33.891 18.661 1.00 5.90 ATOM 145 CD1 TRP 20 0.287 32.691 18.061 1.00 5.90 ATOM 146 CD2 TRP 20 -0.045 33.726 20.028 1.00 5.90 ATOM 147 NE1 TRP 20 -0.265 31.795 18.958 1.00 5.90 ATOM 148 CE2 TRP 20 -0.489 32.378 20.187 1.00 5.90 ATOM 149 CE3 TRP 20 -0.169 34.577 21.151 1.00 5.90 ATOM 150 CZ2 TRP 20 -1.023 31.899 21.394 1.00 5.90 ATOM 151 CZ3 TRP 20 -0.699 34.105 22.368 1.00 5.90 ATOM 152 CH2 TRP 20 -1.126 32.771 22.492 1.00 5.90 ATOM 153 N ALA 21 3.165 34.011 20.249 1.00 5.90 ATOM 154 CA ALA 21 3.597 33.717 21.613 1.00 5.90 ATOM 155 C ALA 21 5.037 34.201 21.876 1.00 5.90 ATOM 156 O ALA 21 5.332 34.639 22.986 1.00 5.90 ATOM 157 CB ALA 21 3.428 32.217 21.877 1.00 6.10 ATOM 158 N SER 22 5.917 34.206 20.866 1.00 6.00 ATOM 159 CA SER 22 7.263 34.805 20.961 1.00 6.00 ATOM 160 C SER 22 7.208 36.325 21.182 1.00 6.00 ATOM 161 O SER 22 7.934 36.853 22.025 1.00 6.00 ATOM 162 CB SER 22 8.099 34.500 19.709 1.00 6.00 ATOM 163 OG SER 22 8.138 33.102 19.455 1.00 6.00 ATOM 164 N LEU 23 6.300 37.026 20.488 1.00 6.00 ATOM 165 CA LEU 23 5.997 38.448 20.715 1.00 6.00 ATOM 166 C LEU 23 5.508 38.684 22.157 1.00 6.00 ATOM 167 O LEU 23 6.049 39.547 22.848 1.00 6.00 ATOM 168 CB LEU 23 4.957 38.921 19.671 1.00 6.10 ATOM 169 CG LEU 23 5.539 39.565 18.399 1.00 6.10 ATOM 170 CD1 LEU 23 6.664 38.771 17.736 1.00 6.10 ATOM 171 CD2 LEU 23 4.439 39.735 17.350 1.00 6.10 ATOM 172 N ALA 24 4.553 37.876 22.633 1.00 6.80 ATOM 173 CA ALA 24 4.040 37.960 24.004 1.00 6.80 ATOM 174 C ALA 24 5.123 37.689 25.073 1.00 6.80 ATOM 175 O ALA 24 5.204 38.409 26.073 1.00 6.80 ATOM 176 CB ALA 24 2.859 36.990 24.138 1.00 6.80 ATOM 177 N ALA 25 5.978 36.681 24.862 1.00 7.50 ATOM 178 CA ALA 25 7.050 36.293 25.782 1.00 7.50 ATOM 179 C ALA 25 8.162 37.357 25.896 1.00 7.50 ATOM 180 O ALA 25 8.662 37.606 26.996 1.00 7.50 ATOM 181 CB ALA 25 7.621 34.947 25.322 1.00 7.40 ATOM 182 N ASN 26 8.512 38.026 24.791 1.00 7.50 ATOM 183 CA ASN 26 9.485 39.129 24.752 1.00 7.50 ATOM 184 C ASN 26 8.875 40.501 25.141 1.00 7.50 ATOM 185 O ASN 26 9.274 41.544 24.622 1.00 7.50 ATOM 186 CB ASN 26 10.235 39.102 23.403 1.00 7.30 ATOM 187 CG ASN 26 11.074 37.842 23.213 1.00 7.30 ATOM 188 OD1 ASN 26 11.566 37.227 24.151 1.00 7.30 ATOM 189 ND2 ASN 26 11.291 37.416 21.988 1.00 7.30 ATOM 190 N GLU 27 7.910 40.499 26.071 1.00 8.30 ATOM 191 CA GLU 27 7.325 41.682 26.733 1.00 8.30 ATOM 192 C GLU 27 6.746 42.742 25.767 1.00 8.30 ATOM 193 O GLU 27 6.867 43.954 25.989 1.00 8.30 ATOM 194 CB GLU 27 8.295 42.258 27.786 1.00 9.00 ATOM 195 CG GLU 27 8.712 41.218 28.842 1.00 9.00 ATOM 196 CD GLU 27 9.452 41.817 30.059 1.00 9.00 ATOM 197 OE1 GLU 27 9.735 43.041 30.104 1.00 9.00 ATOM 198 OE2 GLU 27 9.764 41.048 31.002 1.00 9.00 ATOM 199 N LEU 28 6.113 42.271 24.685 1.00 8.40 ATOM 200 CA LEU 28 5.506 43.072 23.615 1.00 8.40 ATOM 201 C LEU 28 4.098 42.569 23.228 1.00 8.40 ATOM 202 O LEU 28 3.679 41.463 23.576 1.00 8.40 ATOM 203 CB LEU 28 6.468 43.106 22.405 1.00 8.80 ATOM 204 CG LEU 28 7.681 44.038 22.597 1.00 8.80 ATOM 205 CD1 LEU 28 8.726 43.786 21.511 1.00 8.80 ATOM 206 CD2 LEU 28 7.265 45.506 22.492 1.00 8.80 ATOM 207 N ARG 29 3.345 43.431 22.534 1.00 8.20 ATOM 208 CA ARG 29 1.927 43.232 22.170 1.00 8.20 ATOM 209 C ARG 29 1.732 42.419 20.878 1.00 8.20 ATOM 210 O ARG 29 2.662 42.225 20.095 1.00 8.20 ATOM 211 CB ARG 29 1.260 44.618 22.059 1.00 10.00 ATOM 212 CG ARG 29 1.149 45.345 23.409 1.00 10.00 ATOM 213 CD ARG 29 0.519 46.731 23.226 1.00 10.00 ATOM 214 NE ARG 29 0.313 47.408 24.522 1.00 10.00 ATOM 215 CZ ARG 29 -0.072 48.658 24.714 1.00 10.00 ATOM 216 NH1 ARG 29 -0.232 49.118 25.922 1.00 10.00 ATOM 217 NH2 ARG 29 -0.309 49.475 23.725 1.00 10.00 ATOM 218 N VAL 30 0.479 42.028 20.627 1.00 6.10 ATOM 219 CA VAL 30 -0.033 41.438 19.371 1.00 6.10 ATOM 220 C VAL 30 -1.352 42.122 18.970 1.00 6.10 ATOM 221 O VAL 30 -2.202 42.385 19.824 1.00 6.10 ATOM 222 CB VAL 30 -0.221 39.906 19.471 1.00 6.20 ATOM 223 CG1 VAL 30 1.127 39.178 19.492 1.00 6.20 ATOM 224 CG2 VAL 30 -1.029 39.445 20.693 1.00 6.20 ATOM 225 N THR 31 -1.521 42.447 17.684 1.00 5.00 ATOM 226 CA THR 31 -2.743 43.087 17.150 1.00 5.00 ATOM 227 C THR 31 -3.832 42.038 16.852 1.00 5.00 ATOM 228 O THR 31 -3.523 40.857 16.705 1.00 5.00 ATOM 229 CB THR 31 -2.454 43.905 15.875 1.00 5.10 ATOM 230 OG1 THR 31 -1.142 44.417 15.864 1.00 5.10 ATOM 231 CG2 THR 31 -3.353 45.138 15.790 1.00 5.10 ATOM 232 N GLU 32 -5.105 42.450 16.737 1.00 5.00 ATOM 233 CA GLU 32 -6.237 41.563 16.374 1.00 5.00 ATOM 234 C GLU 32 -7.232 42.187 15.359 1.00 5.00 ATOM 235 O GLU 32 -8.365 41.718 15.222 1.00 5.00 ATOM 236 CB GLU 32 -6.954 41.060 17.647 1.00 5.70 ATOM 237 CG GLU 32 -6.048 40.266 18.603 1.00 5.70 ATOM 238 CD GLU 32 -6.842 39.572 19.728 1.00 5.70 ATOM 239 OE1 GLU 32 -7.757 40.194 20.325 1.00 5.70 ATOM 240 OE2 GLU 32 -6.545 38.393 20.044 1.00 5.70 ATOM 241 N ARG 33 -6.832 43.251 14.638 1.00 4.50 ATOM 242 CA ARG 33 -7.667 43.942 13.623 1.00 4.50 ATOM 243 C ARG 33 -7.958 43.035 12.409 1.00 4.50 ATOM 244 O ARG 33 -7.121 42.195 12.074 1.00 4.50 ATOM 245 CB ARG 33 -6.984 45.255 13.173 1.00 4.90 ATOM 246 CG ARG 33 -6.911 46.345 14.258 1.00 4.90 ATOM 247 CD ARG 33 -8.248 47.018 14.613 1.00 4.90 ATOM 248 NE ARG 33 -8.691 47.974 13.573 1.00 4.90 ATOM 249 CZ ARG 33 -9.551 48.972 13.732 1.00 4.90 ATOM 250 NH1 ARG 33 -9.833 49.772 12.744 1.00 4.90 ATOM 251 NH2 ARG 33 -10.145 49.203 14.869 1.00 4.90 ATOM 252 N PRO 34 -9.080 43.229 11.686 1.00 5.30 ATOM 253 CA PRO 34 -9.459 42.359 10.565 1.00 5.30 ATOM 254 C PRO 34 -8.464 42.389 9.394 1.00 5.30 ATOM 255 O PRO 34 -8.180 41.342 8.813 1.00 5.30 ATOM 256 CB PRO 34 -10.861 42.816 10.142 1.00 5.70 ATOM 257 CG PRO 34 -10.957 44.253 10.651 1.00 5.70 ATOM 258 CD PRO 34 -10.127 44.213 11.932 1.00 5.70 ATOM 259 N PHE 35 -7.874 43.545 9.067 1.00 5.00 ATOM 260 CA PHE 35 -6.840 43.611 8.023 1.00 5.00 ATOM 261 C PHE 35 -5.482 43.058 8.480 1.00 5.00 ATOM 262 O PHE 35 -4.737 42.513 7.666 1.00 5.00 ATOM 263 CB PHE 35 -6.726 45.029 7.464 1.00 5.90 ATOM 264 CG PHE 35 -6.239 46.115 8.401 1.00 5.90 ATOM 265 CD1 PHE 35 -4.859 46.361 8.539 1.00 5.90 ATOM 266 CD2 PHE 35 -7.167 46.947 9.058 1.00 5.90 ATOM 267 CE1 PHE 35 -4.409 47.430 9.334 1.00 5.90 ATOM 268 CE2 PHE 35 -6.716 48.014 9.852 1.00 5.90 ATOM 269 CZ PHE 35 -5.338 48.254 9.990 1.00 5.90 ATOM 270 N TRP 36 -5.165 43.132 9.778 1.00 3.90 ATOM 271 CA TRP 36 -3.992 42.459 10.346 1.00 3.90 ATOM 272 C TRP 36 -4.139 40.933 10.256 1.00 3.90 ATOM 273 O TRP 36 -3.240 40.258 9.758 1.00 3.90 ATOM 274 CB TRP 36 -3.763 42.930 11.789 1.00 4.70 ATOM 275 CG TRP 36 -2.619 42.270 12.497 1.00 4.70 ATOM 276 CD1 TRP 36 -1.355 42.745 12.535 1.00 4.70 ATOM 277 CD2 TRP 36 -2.586 41.000 13.229 1.00 4.70 ATOM 278 NE1 TRP 36 -0.558 41.893 13.271 1.00 4.70 ATOM 279 CE2 TRP 36 -1.256 40.788 13.703 1.00 4.70 ATOM 280 CE3 TRP 36 -3.542 40.009 13.551 1.00 4.70 ATOM 281 CZ2 TRP 36 -0.888 39.654 14.443 1.00 4.70 ATOM 282 CZ3 TRP 36 -3.178 38.850 14.266 1.00 4.70 ATOM 283 CH2 TRP 36 -1.855 38.670 14.711 1.00 4.70 ATOM 284 N ILE 37 -5.291 40.386 10.668 1.00 4.60 ATOM 285 CA ILE 37 -5.504 38.931 10.716 1.00 4.60 ATOM 286 C ILE 37 -5.566 38.310 9.306 1.00 4.60 ATOM 287 O ILE 37 -5.033 37.219 9.092 1.00 4.60 ATOM 288 CB ILE 37 -6.708 38.592 11.635 1.00 5.20 ATOM 289 CG1 ILE 37 -6.465 37.267 12.385 1.00 5.20 ATOM 290 CG2 ILE 37 -8.058 38.549 10.901 1.00 5.20 ATOM 291 CD1 ILE 37 -7.466 37.010 13.521 1.00 5.20 ATOM 292 N SER 38 -6.125 39.013 8.309 1.00 5.10 ATOM 293 CA SER 38 -6.152 38.540 6.916 1.00 5.10 ATOM 294 C SER 38 -4.790 38.669 6.217 1.00 5.10 ATOM 295 O SER 38 -4.332 37.695 5.618 1.00 5.10 ATOM 296 CB SER 38 -7.259 39.246 6.127 1.00 5.40 ATOM 297 OG SER 38 -6.976 40.622 5.953 1.00 5.40 ATOM 298 N SER 39 -4.074 39.797 6.369 1.00 4.40 ATOM 299 CA SER 39 -2.682 39.963 5.883 1.00 4.40 ATOM 300 C SER 39 -1.663 39.080 6.626 1.00 4.40 ATOM 301 O SER 39 -0.464 39.115 6.340 1.00 4.40 ATOM 302 CB SER 39 -2.249 41.435 5.883 1.00 4.50 ATOM 303 OG SER 39 -2.143 41.938 7.196 1.00 4.50 ATOM 304 N PHE 40 -2.122 38.283 7.589 1.00 4.20 ATOM 305 CA PHE 40 -1.397 37.188 8.223 1.00 4.20 ATOM 306 C PHE 40 -1.785 35.854 7.558 1.00 4.20 ATOM 307 O PHE 40 -0.927 35.186 6.982 1.00 4.20 ATOM 308 CB PHE 40 -1.673 37.210 9.741 1.00 5.10 ATOM 309 CG PHE 40 -0.606 37.910 10.567 1.00 5.10 ATOM 310 CD1 PHE 40 -0.117 39.181 10.204 1.00 5.10 ATOM 311 CD2 PHE 40 -0.079 37.267 11.703 1.00 5.10 ATOM 312 CE1 PHE 40 0.928 39.772 10.938 1.00 5.10 ATOM 313 CE2 PHE 40 0.978 37.846 12.423 1.00 5.10 ATOM 314 CZ PHE 40 1.487 39.096 12.035 1.00 5.10 ATOM 315 N ILE 41 -3.071 35.483 7.608 1.00 4.50 ATOM 316 CA ILE 41 -3.577 34.149 7.234 1.00 4.50 ATOM 317 C ILE 41 -3.469 33.813 5.731 1.00 4.50 ATOM 318 O ILE 41 -3.236 32.647 5.401 1.00 4.50 ATOM 319 CB ILE 41 -5.019 33.990 7.786 1.00 5.30 ATOM 320 CG1 ILE 41 -4.961 33.874 9.330 1.00 5.30 ATOM 321 CG2 ILE 41 -5.772 32.777 7.202 1.00 5.30 ATOM 322 CD1 ILE 41 -6.317 34.046 10.027 1.00 5.30 ATOM 323 N GLY 42 -3.611 34.777 4.812 1.00 4.30 ATOM 324 CA GLY 42 -3.494 34.495 3.369 1.00 4.30 ATOM 325 C GLY 42 -3.697 35.701 2.446 1.00 4.30 ATOM 326 O GLY 42 -4.503 36.587 2.731 1.00 4.30 ATOM 327 N ARG 43 -2.954 35.730 1.328 1.00 3.70 ATOM 328 CA ARG 43 -2.892 36.842 0.350 1.00 3.70 ATOM 329 C ARG 43 -3.017 36.343 -1.099 1.00 3.70 ATOM 330 O ARG 43 -2.765 35.173 -1.389 1.00 3.70 ATOM 331 CB ARG 43 -1.567 37.610 0.513 1.00 4.50 ATOM 332 CG ARG 43 -1.371 38.286 1.882 1.00 4.50 ATOM 333 CD ARG 43 0.082 38.771 2.010 1.00 4.50 ATOM 334 NE ARG 43 0.615 38.659 3.384 1.00 4.50 ATOM 335 CZ ARG 43 1.007 37.556 4.000 1.00 4.50 ATOM 336 NH1 ARG 43 1.811 37.632 5.018 1.00 4.50 ATOM 337 NH2 ARG 43 0.640 36.369 3.611 1.00 4.50 ATOM 338 N SER 44 -3.381 37.257 -1.999 1.00 4.40 ATOM 339 CA SER 44 -3.456 37.059 -3.454 1.00 4.40 ATOM 340 C SER 44 -2.129 37.449 -4.160 1.00 4.40 ATOM 341 O SER 44 -1.048 37.148 -3.646 1.00 4.40 ATOM 342 CB SER 44 -4.720 37.781 -3.955 1.00 5.10 ATOM 343 OG SER 44 -4.964 37.519 -5.327 1.00 5.10 ATOM 344 N LYS 45 -2.193 38.078 -5.344 1.00 3.00 ATOM 345 CA LYS 45 -1.081 38.388 -6.271 1.00 3.00 ATOM 346 C LYS 45 0.076 39.245 -5.700 1.00 3.00 ATOM 347 O LYS 45 -0.048 39.916 -4.673 1.00 3.00 ATOM 348 CB LYS 45 -1.669 39.085 -7.514 1.00 3.30 ATOM 349 CG LYS 45 -2.620 38.245 -8.388 1.00 3.30 ATOM 350 CD LYS 45 -1.883 37.203 -9.246 1.00 3.30 ATOM 351 CE LYS 45 -2.869 36.514 -10.202 1.00 3.30 ATOM 352 NZ LYS 45 -2.180 35.564 -11.119 1.00 3.30 TER END