####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS471_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS471_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 6 - 17 4.96 43.66 LONGEST_CONTINUOUS_SEGMENT: 12 9 - 20 4.90 38.11 LONGEST_CONTINUOUS_SEGMENT: 12 26 - 37 4.82 40.37 LONGEST_CONTINUOUS_SEGMENT: 12 27 - 38 4.22 41.92 LONGEST_CONTINUOUS_SEGMENT: 12 28 - 39 4.97 44.18 LONGEST_CONTINUOUS_SEGMENT: 12 33 - 44 4.98 55.62 LONGEST_CONTINUOUS_SEGMENT: 12 34 - 45 4.71 56.46 LCS_AVERAGE: 26.55 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 29 - 36 1.61 42.88 LONGEST_CONTINUOUS_SEGMENT: 8 30 - 37 1.94 45.34 LONGEST_CONTINUOUS_SEGMENT: 8 31 - 38 1.56 47.74 LCS_AVERAGE: 13.53 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 31 - 36 0.68 45.77 LONGEST_CONTINUOUS_SEGMENT: 6 32 - 37 1.00 48.37 LCS_AVERAGE: 9.04 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 10 3 3 4 4 5 6 7 8 8 8 8 9 9 10 10 11 11 12 12 13 LCS_GDT V 3 V 3 4 6 10 3 3 4 4 5 6 6 8 8 8 8 9 9 9 9 9 11 12 12 13 LCS_GDT Q 4 Q 4 4 6 10 3 4 4 4 5 6 7 8 8 8 8 9 9 10 10 11 11 12 12 13 LCS_GDT G 5 G 5 4 6 11 3 4 4 4 5 6 7 8 8 8 8 9 10 10 12 15 16 16 16 16 LCS_GDT P 6 P 6 4 6 12 3 4 4 5 5 6 7 8 8 9 10 11 13 14 15 15 16 17 17 18 LCS_GDT W 7 W 7 4 6 12 3 4 4 5 5 6 7 8 8 9 10 11 13 14 15 15 16 17 17 18 LCS_GDT V 8 V 8 4 5 12 3 3 4 5 5 5 7 8 8 9 10 11 13 14 15 15 16 17 17 18 LCS_GDT G 9 G 9 4 5 12 0 3 4 5 5 5 7 8 8 9 10 11 13 14 15 15 16 17 17 18 LCS_GDT S 10 S 10 3 5 12 3 3 3 5 5 5 5 7 8 9 10 11 13 14 15 15 16 17 17 18 LCS_GDT S 11 S 11 3 4 12 3 3 3 4 4 4 5 7 8 9 10 11 13 14 15 15 16 17 17 18 LCS_GDT Y 12 Y 12 3 4 12 3 3 3 4 4 4 5 6 8 9 10 11 13 14 15 15 16 17 17 18 LCS_GDT V 13 V 13 3 4 12 3 3 3 3 4 4 5 7 8 9 10 11 12 13 15 15 16 17 17 18 LCS_GDT A 14 A 14 3 4 12 3 3 3 3 4 4 6 8 9 9 10 11 13 14 15 15 16 17 17 18 LCS_GDT E 15 E 15 3 6 12 3 4 4 6 7 8 8 8 9 9 10 11 13 14 15 15 16 17 17 18 LCS_GDT T 16 T 16 3 6 12 3 3 4 6 7 8 8 8 9 9 10 11 13 14 15 15 16 17 17 18 LCS_GDT G 17 G 17 3 6 12 3 4 4 6 7 8 8 8 9 9 9 11 13 14 15 15 16 17 17 18 LCS_GDT Q 18 Q 18 3 6 12 3 3 4 6 7 8 8 8 9 9 9 11 13 14 15 15 16 17 17 18 LCS_GDT N 19 N 19 3 6 12 3 4 4 6 7 8 8 8 9 9 9 11 13 14 15 15 16 17 17 18 LCS_GDT W 20 W 20 3 6 12 3 4 4 6 7 8 8 8 9 9 9 11 13 14 15 15 16 17 17 18 LCS_GDT A 21 A 21 3 6 11 3 3 4 5 6 8 8 8 9 9 9 10 11 11 12 12 16 17 17 18 LCS_GDT S 22 S 22 3 6 11 3 3 4 5 7 8 8 8 9 9 9 10 11 11 12 12 16 17 17 18 LCS_GDT L 23 L 23 3 3 11 3 3 3 3 3 4 5 6 7 7 9 10 10 10 10 12 12 13 16 18 LCS_GDT A 24 A 24 3 3 11 3 3 3 3 3 4 4 5 6 7 7 8 9 9 10 10 11 12 13 13 LCS_GDT A 25 A 25 3 3 9 0 3 3 3 3 4 4 5 6 7 7 8 9 9 10 10 11 12 13 13 LCS_GDT N 26 N 26 3 3 12 0 3 3 3 3 4 4 5 6 7 7 8 8 9 11 11 11 11 13 13 LCS_GDT E 27 E 27 3 7 12 3 3 3 5 7 7 7 9 9 10 10 10 10 10 12 12 12 12 12 13 LCS_GDT L 28 L 28 5 7 12 3 4 5 5 7 7 8 9 9 10 10 10 11 11 12 12 12 12 12 13 LCS_GDT R 29 R 29 5 8 12 3 4 5 7 8 8 8 9 9 10 10 10 11 11 12 12 12 12 12 13 LCS_GDT V 30 V 30 5 8 12 3 4 5 7 8 8 8 9 9 10 10 10 11 11 12 12 12 12 12 13 LCS_GDT T 31 T 31 6 8 12 3 5 6 7 8 8 8 9 9 10 10 10 11 11 12 12 12 12 12 13 LCS_GDT E 32 E 32 6 8 12 3 5 6 7 8 8 8 9 9 10 10 10 11 11 12 12 12 12 13 13 LCS_GDT R 33 R 33 6 8 12 3 5 6 7 8 8 8 9 9 10 10 10 11 11 12 12 12 13 13 13 LCS_GDT P 34 P 34 6 8 12 4 5 6 7 8 8 8 9 9 10 10 11 11 11 12 12 12 13 13 13 LCS_GDT F 35 F 35 6 8 12 4 5 6 7 8 8 8 9 9 10 10 11 11 11 12 12 12 13 13 13 LCS_GDT W 36 W 36 6 8 12 4 5 6 7 8 8 8 9 9 10 10 11 11 11 12 12 12 13 13 13 LCS_GDT I 37 I 37 6 8 12 4 4 6 7 7 8 8 8 9 10 10 11 11 11 12 12 12 13 13 13 LCS_GDT S 38 S 38 5 8 12 1 3 5 6 7 8 8 8 9 10 10 11 11 11 12 12 12 13 13 13 LCS_GDT S 39 S 39 3 5 12 0 3 3 5 5 6 8 8 9 10 10 11 11 11 11 12 12 13 13 13 LCS_GDT F 40 F 40 4 6 12 3 3 4 5 5 6 8 8 9 10 10 11 11 11 11 12 12 13 13 13 LCS_GDT I 41 I 41 4 6 12 3 3 4 5 5 6 8 8 9 10 10 11 11 11 11 12 12 13 13 13 LCS_GDT G 42 G 42 4 6 12 3 3 4 5 5 6 8 8 9 10 10 11 11 11 11 12 12 13 13 13 LCS_GDT R 43 R 43 4 6 12 3 3 4 5 5 6 8 8 9 10 10 11 11 11 11 12 12 13 13 13 LCS_GDT S 44 S 44 4 6 12 3 3 4 5 5 6 8 8 9 10 10 11 11 11 11 12 12 13 13 13 LCS_GDT K 45 K 45 4 6 12 3 3 4 4 5 6 8 8 9 10 10 10 11 11 11 12 12 13 13 13 LCS_AVERAGE LCS_A: 16.37 ( 9.04 13.53 26.55 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 7 8 8 8 9 9 10 10 11 13 14 15 15 16 17 17 18 GDT PERCENT_AT 9.09 11.36 13.64 15.91 18.18 18.18 18.18 20.45 20.45 22.73 22.73 25.00 29.55 31.82 34.09 34.09 36.36 38.64 38.64 40.91 GDT RMS_LOCAL 0.15 0.55 0.68 1.17 1.61 1.56 1.56 2.34 2.28 2.77 2.77 4.32 5.28 5.55 5.69 5.69 6.18 6.49 6.49 6.90 GDT RMS_ALL_AT 51.83 45.69 45.77 47.05 42.88 47.74 47.74 41.29 44.11 44.93 44.93 44.65 39.98 40.76 40.84 40.84 39.92 39.03 39.03 38.45 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 67.498 0 0.054 0.051 70.129 0.000 0.000 - LGA V 3 V 3 71.819 0 0.062 0.084 74.197 0.000 0.000 74.197 LGA Q 4 Q 4 73.032 0 0.028 0.905 75.079 0.000 0.000 71.208 LGA G 5 G 5 74.444 0 0.053 0.053 74.444 0.000 0.000 - LGA P 6 P 6 73.618 0 0.677 0.588 76.059 0.000 0.000 76.059 LGA W 7 W 7 70.536 0 0.412 0.332 79.425 0.000 0.000 79.425 LGA V 8 V 8 65.538 0 0.656 1.477 67.804 0.000 0.000 65.928 LGA G 9 G 9 63.451 0 0.497 0.497 64.309 0.000 0.000 - LGA S 10 S 10 60.127 0 0.634 0.814 61.659 0.000 0.000 59.287 LGA S 11 S 11 56.079 0 0.626 0.773 57.461 0.000 0.000 52.466 LGA Y 12 Y 12 54.920 0 0.561 1.312 64.738 0.000 0.000 64.738 LGA V 13 V 13 52.702 0 0.612 0.606 54.834 0.000 0.000 52.194 LGA A 14 A 14 49.957 0 0.624 0.595 51.111 0.000 0.000 - LGA E 15 E 15 43.577 0 0.643 1.276 46.327 0.000 0.000 39.768 LGA T 16 T 16 41.188 0 0.707 1.015 44.485 0.000 0.000 44.485 LGA G 17 G 17 40.149 0 0.722 0.722 42.226 0.000 0.000 - LGA Q 18 Q 18 40.481 0 0.264 0.950 41.707 0.000 0.000 37.040 LGA N 19 N 19 42.467 0 0.665 1.144 42.808 0.000 0.000 40.909 LGA W 20 W 20 40.396 0 0.039 0.099 48.625 0.000 0.000 48.506 LGA A 21 A 21 36.422 0 0.657 0.622 38.160 0.000 0.000 - LGA S 22 S 22 31.471 0 0.620 0.794 33.374 0.000 0.000 31.668 LGA L 23 L 23 25.093 0 0.650 1.418 27.719 0.000 0.000 24.206 LGA A 24 A 24 22.333 0 0.632 0.600 24.020 0.000 0.000 - LGA A 25 A 25 18.248 0 0.615 0.607 19.951 0.000 0.000 - LGA N 26 N 26 12.666 0 0.639 0.719 18.301 0.000 0.000 16.932 LGA E 27 E 27 7.295 0 0.666 1.128 9.654 0.000 0.000 6.319 LGA L 28 L 28 4.509 0 0.498 0.463 8.439 7.727 3.864 8.439 LGA R 29 R 29 1.112 0 0.489 1.315 9.632 58.636 25.455 9.632 LGA V 30 V 30 1.313 0 0.035 0.093 2.720 61.818 48.571 2.629 LGA T 31 T 31 2.263 0 0.667 0.953 5.490 48.182 30.390 5.490 LGA E 32 E 32 1.411 0 0.072 0.794 4.086 65.909 43.030 4.086 LGA R 33 R 33 0.635 0 0.608 1.005 10.879 72.727 31.570 10.879 LGA P 34 P 34 1.752 0 0.101 0.410 4.609 65.909 43.117 4.609 LGA F 35 F 35 2.436 0 0.057 1.341 4.217 28.636 19.669 3.555 LGA W 36 W 36 3.084 0 0.048 0.073 6.309 14.545 21.558 6.309 LGA I 37 I 37 7.636 0 0.671 1.232 12.202 0.000 0.000 12.202 LGA S 38 S 38 9.709 0 0.670 0.825 13.896 0.000 0.000 8.953 LGA S 39 S 39 16.238 0 0.717 0.880 18.777 0.000 0.000 16.128 LGA F 40 F 40 20.749 0 0.677 0.941 24.254 0.000 0.000 17.663 LGA I 41 I 41 24.363 0 0.050 0.092 26.464 0.000 0.000 21.289 LGA G 42 G 42 30.369 0 0.695 0.695 30.674 0.000 0.000 - LGA R 43 R 43 31.660 0 0.091 1.309 33.837 0.000 0.000 29.020 LGA S 44 S 44 36.695 0 0.041 0.687 37.762 0.000 0.000 36.308 LGA K 45 K 45 40.466 0 0.031 1.073 43.542 0.000 0.000 38.219 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 28.955 28.885 28.862 9.638 6.073 1.299 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 9 2.34 20.455 18.674 0.369 LGA_LOCAL RMSD: 2.341 Number of atoms: 9 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 41.293 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 28.955 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.300965 * X + -0.921593 * Y + -0.245124 * Z + 64.718285 Y_new = 0.673496 * X + -0.023433 * Y + -0.738819 * Z + 22.519327 Z_new = 0.675147 * X + -0.387449 * Y + 0.627742 * Z + -59.537632 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.991044 -0.741164 -0.552978 [DEG: 114.0784 -42.4656 -31.6833 ] ZXZ: -0.320350 0.892147 2.091783 [DEG: -18.3547 51.1163 119.8503 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS471_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS471_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 9 2.34 18.674 28.95 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS471_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT 1SRP_A 1GO7_P 1OMJ_A 4PEU_A 3P4G_A ATOM 9 N ALA 2 23.976 37.381 79.879 1.00 0.51 N ATOM 10 CA ALA 2 22.551 37.485 79.818 1.00 0.51 C ATOM 11 C ALA 2 22.011 36.175 80.277 1.00 0.51 C ATOM 12 O ALA 2 22.711 35.164 80.251 1.00 0.51 O ATOM 13 CB ALA 2 22.102 37.839 78.409 1.00 0.51 C ATOM 14 N VAL 3 20.751 36.166 80.745 1.00 0.52 N ATOM 15 CA VAL 3 20.203 34.938 81.225 1.00 0.52 C ATOM 16 C VAL 3 20.213 33.985 80.084 1.00 0.52 C ATOM 17 O VAL 3 19.902 34.340 78.949 1.00 0.52 O ATOM 18 CB VAL 3 18.780 35.138 81.794 1.00 0.52 C ATOM 19 CG1 VAL 3 18.156 33.797 82.152 1.00 0.52 C ATOM 20 CG2 VAL 3 18.815 36.048 83.012 1.00 0.52 C ATOM 21 N GLN 4 20.600 32.733 80.377 1.00 0.56 N ATOM 22 CA GLN 4 20.725 31.722 79.375 1.00 0.56 C ATOM 23 C GLN 4 19.362 31.203 79.053 1.00 0.56 C ATOM 24 O GLN 4 18.520 31.026 79.932 1.00 0.56 O ATOM 25 CB GLN 4 21.651 30.603 79.855 1.00 0.56 C ATOM 26 CG GLN 4 23.075 31.054 80.138 1.00 0.56 C ATOM 27 CD GLN 4 23.795 31.530 78.892 1.00 0.56 C ATOM 28 OE1 GLN 4 23.959 30.778 77.932 1.00 0.56 O ATOM 29 NE2 GLN 4 24.231 32.785 78.902 1.00 0.56 N ATOM 30 N GLY 5 19.111 30.958 77.752 1.00 0.55 N ATOM 31 CA GLY 5 17.836 30.466 77.325 1.00 0.55 C ATOM 32 C GLY 5 17.860 30.472 75.834 1.00 0.55 C ATOM 33 O GLY 5 18.835 30.905 75.219 1.00 0.55 O ATOM 34 N PRO 6 16.795 30.003 75.247 1.00 0.56 N ATOM 35 CA PRO 6 16.701 29.917 73.819 1.00 0.56 C ATOM 36 C PRO 6 16.996 31.253 73.219 1.00 0.56 C ATOM 37 O PRO 6 16.460 32.257 73.688 1.00 0.56 O ATOM 38 CB PRO 6 15.254 29.479 73.590 1.00 0.56 C ATOM 39 CG PRO 6 14.900 28.700 74.817 1.00 0.56 C ATOM 40 CD PRO 6 15.553 29.432 75.960 1.00 0.56 C ATOM 41 N TRP 7 17.845 31.273 72.177 1.00 0.45 N ATOM 42 CA TRP 7 18.214 32.481 71.503 1.00 0.45 C ATOM 43 C TRP 7 17.140 32.729 70.495 1.00 0.45 C ATOM 44 O TRP 7 16.609 31.792 69.900 1.00 0.45 O ATOM 45 CB TRP 7 19.601 32.341 70.871 1.00 0.45 C ATOM 46 CG TRP 7 20.716 32.272 71.872 1.00 0.45 C ATOM 47 CD1 TRP 7 21.359 31.147 72.307 1.00 0.45 C ATOM 48 CD2 TRP 7 21.320 33.373 72.561 1.00 0.45 C ATOM 49 NE1 TRP 7 22.327 31.479 73.225 1.00 0.45 N ATOM 50 CE2 TRP 7 22.325 32.842 73.401 1.00 0.45 C ATOM 51 CE3 TRP 7 21.108 34.757 72.552 1.00 0.45 C ATOM 52 CZ2 TRP 7 23.117 33.649 74.224 1.00 0.45 C ATOM 53 CZ3 TRP 7 21.898 35.560 73.369 1.00 0.45 C ATOM 54 CH2 TRP 7 22.890 35.001 74.194 1.00 0.45 C ATOM 55 N VAL 8 16.767 34.004 70.291 1.00 0.45 N ATOM 56 CA VAL 8 15.708 34.270 69.366 1.00 0.45 C ATOM 57 C VAL 8 16.140 35.393 68.490 1.00 0.45 C ATOM 58 O VAL 8 17.116 36.085 68.773 1.00 0.45 O ATOM 59 CB VAL 8 14.386 34.602 70.096 1.00 0.45 C ATOM 60 CG1 VAL 8 13.948 33.432 70.963 1.00 0.45 C ATOM 61 CG2 VAL 8 14.546 35.859 70.938 1.00 0.45 C ATOM 62 N GLY 9 15.421 35.580 67.370 1.00 0.47 N ATOM 63 CA GLY 9 15.723 36.665 66.493 1.00 0.47 C ATOM 64 C GLY 9 16.706 36.199 65.476 1.00 0.47 C ATOM 65 O GLY 9 17.178 35.066 65.508 1.00 0.47 O ATOM 66 N SER 10 17.026 37.104 64.534 1.00 0.64 N ATOM 67 CA SER 10 17.949 36.830 63.479 1.00 0.64 C ATOM 68 C SER 10 18.545 38.152 63.138 1.00 0.64 C ATOM 69 O SER 10 18.484 39.078 63.945 1.00 0.64 O ATOM 70 CB SER 10 17.234 36.165 62.301 1.00 0.64 C ATOM 71 OG SER 10 18.171 35.665 61.361 1.00 0.64 O ATOM 72 N SER 11 19.161 38.272 61.946 1.00 0.64 N ATOM 73 CA SER 11 19.728 39.539 61.597 1.00 0.64 C ATOM 74 C SER 11 18.605 40.514 61.613 1.00 0.64 C ATOM 75 O SER 11 17.451 40.142 61.405 1.00 0.64 O ATOM 76 CB SER 11 20.423 39.459 60.236 1.00 0.64 C ATOM 77 OG SER 11 19.479 39.244 59.201 1.00 0.64 O ATOM 78 N TYR 12 18.912 41.795 61.887 1.00 0.43 N ATOM 79 CA TYR 12 17.847 42.748 61.930 1.00 0.43 C ATOM 80 C TYR 12 17.875 43.462 60.623 1.00 0.43 C ATOM 81 O TYR 12 18.515 44.504 60.485 1.00 0.43 O ATOM 82 CB TYR 12 18.020 43.692 63.121 1.00 0.43 C ATOM 83 CG TYR 12 17.934 43.002 64.463 1.00 0.43 C ATOM 84 CD1 TYR 12 19.072 42.461 65.061 1.00 0.43 C ATOM 85 CD2 TYR 12 16.717 42.893 65.133 1.00 0.43 C ATOM 86 CE1 TYR 12 19.000 41.824 66.296 1.00 0.43 C ATOM 87 CE2 TYR 12 16.632 42.259 66.370 1.00 0.43 C ATOM 88 CZ TYR 12 17.780 41.727 66.944 1.00 0.43 C ATOM 89 OH TYR 12 17.705 41.099 68.166 1.00 0.43 O ATOM 90 N VAL 13 17.168 42.912 59.618 1.00 0.45 N ATOM 91 CA VAL 13 17.128 43.564 58.347 1.00 0.45 C ATOM 92 C VAL 13 15.686 43.720 58.003 1.00 0.45 C ATOM 93 O VAL 13 14.896 42.794 58.176 1.00 0.45 O ATOM 94 CB VAL 13 17.900 42.762 57.274 1.00 0.45 C ATOM 95 CG1 VAL 13 17.792 43.446 55.919 1.00 0.45 C ATOM 96 CG2 VAL 13 19.358 42.602 57.674 1.00 0.45 C ATOM 97 N ALA 14 15.293 44.908 57.514 1.00 0.45 N ATOM 98 CA ALA 14 13.909 45.057 57.198 1.00 0.45 C ATOM 99 C ALA 14 13.631 44.188 56.022 1.00 0.45 C ATOM 100 O ALA 14 14.331 44.243 55.012 1.00 0.45 O ATOM 101 CB ALA 14 13.580 46.517 56.924 1.00 0.45 C ATOM 102 N GLU 15 12.595 43.338 56.140 1.00 0.44 N ATOM 103 CA GLU 15 12.234 42.501 55.043 1.00 0.44 C ATOM 104 C GLU 15 10.746 42.480 55.013 1.00 0.44 C ATOM 105 O GLU 15 10.097 42.137 56.000 1.00 0.44 O ATOM 106 CB GLU 15 12.842 41.107 55.208 1.00 0.44 C ATOM 107 CG GLU 15 12.551 40.161 54.055 1.00 0.44 C ATOM 108 CD GLU 15 13.226 38.814 54.219 1.00 0.44 C ATOM 109 OE1 GLU 15 13.933 38.620 55.231 1.00 0.44 O ATOM 110 OE2 GLU 15 13.051 37.947 53.334 1.00 0.44 O ATOM 111 N THR 16 10.158 42.870 53.870 1.00 0.44 N ATOM 112 CA THR 16 8.731 42.856 53.793 1.00 0.44 C ATOM 113 C THR 16 8.388 41.996 52.626 1.00 0.44 C ATOM 114 O THR 16 9.052 42.039 51.591 1.00 0.44 O ATOM 115 CB THR 16 8.159 44.280 53.643 1.00 0.44 C ATOM 116 OG1 THR 16 8.540 45.071 54.777 1.00 0.44 O ATOM 117 CG2 THR 16 6.641 44.239 53.559 1.00 0.44 C ATOM 118 N GLY 17 7.345 41.166 52.771 1.00 0.44 N ATOM 119 CA GLY 17 6.996 40.311 51.683 1.00 0.44 C ATOM 120 C GLY 17 6.254 39.150 52.247 1.00 0.44 C ATOM 121 O GLY 17 5.886 39.137 53.420 1.00 0.44 O ATOM 122 N GLN 18 6.026 38.132 51.399 1.00 0.43 N ATOM 123 CA GLN 18 5.292 36.972 51.797 1.00 0.43 C ATOM 124 C GLN 18 6.049 35.787 51.309 1.00 0.43 C ATOM 125 O GLN 18 7.275 35.806 51.212 1.00 0.43 O ATOM 126 CB GLN 18 3.870 37.020 51.236 1.00 0.43 C ATOM 127 CG GLN 18 3.035 38.178 51.760 1.00 0.43 C ATOM 128 CD GLN 18 1.630 38.190 51.191 1.00 0.43 C ATOM 129 OE1 GLN 18 1.430 37.974 49.996 1.00 0.43 O ATOM 130 NE2 GLN 18 0.646 38.443 52.048 1.00 0.43 N ATOM 131 N ASN 19 5.312 34.705 51.008 1.00 0.42 N ATOM 132 CA ASN 19 5.930 33.510 50.527 1.00 0.42 C ATOM 133 C ASN 19 6.631 33.861 49.260 1.00 0.42 C ATOM 134 O ASN 19 6.284 34.835 48.590 1.00 0.42 O ATOM 135 CB ASN 19 4.886 32.410 50.326 1.00 0.42 C ATOM 136 CG ASN 19 3.905 32.730 49.214 1.00 0.42 C ATOM 137 OD1 ASN 19 3.150 33.699 49.299 1.00 0.42 O ATOM 138 ND2 ASN 19 3.913 31.916 48.165 1.00 0.42 N ATOM 139 N TRP 20 7.669 33.079 48.915 1.00 0.39 N ATOM 140 CA TRP 20 8.423 33.367 47.734 1.00 0.39 C ATOM 141 C TRP 20 7.770 32.624 46.618 1.00 0.39 C ATOM 142 O TRP 20 7.670 31.398 46.640 1.00 0.39 O ATOM 143 CB TRP 20 9.888 32.968 47.923 1.00 0.39 C ATOM 144 CG TRP 20 10.621 33.812 48.923 1.00 0.39 C ATOM 145 CD1 TRP 20 10.895 33.492 50.222 1.00 0.39 C ATOM 146 CD2 TRP 20 11.173 35.116 48.704 1.00 0.39 C ATOM 147 NE1 TRP 20 11.584 34.515 50.828 1.00 0.39 N ATOM 148 CE2 TRP 20 11.769 35.527 49.917 1.00 0.39 C ATOM 149 CE3 TRP 20 11.221 35.976 47.600 1.00 0.39 C ATOM 150 CZ2 TRP 20 12.407 36.764 50.056 1.00 0.39 C ATOM 151 CZ3 TRP 20 11.856 37.207 47.739 1.00 0.39 C ATOM 152 CH2 TRP 20 12.440 37.588 48.960 1.00 0.39 C ATOM 153 N ALA 21 7.269 33.376 45.621 1.00 0.41 N ATOM 154 CA ALA 21 6.647 32.756 44.493 1.00 0.41 C ATOM 155 C ALA 21 6.605 33.785 43.416 1.00 0.41 C ATOM 156 O ALA 21 6.595 34.987 43.691 1.00 0.41 O ATOM 157 CB ALA 21 5.264 32.242 44.863 1.00 0.41 C ATOM 158 N SER 22 6.604 33.340 42.148 1.00 0.44 N ATOM 159 CA SER 22 6.535 34.298 41.092 1.00 0.44 C ATOM 160 C SER 22 5.755 33.690 39.982 1.00 0.44 C ATOM 161 O SER 22 5.665 32.471 39.854 1.00 0.44 O ATOM 162 CB SER 22 7.940 34.707 40.645 1.00 0.44 C ATOM 163 OG SER 22 7.877 35.652 39.592 1.00 0.44 O ATOM 164 N LEU 23 5.138 34.556 39.162 1.00 0.43 N ATOM 165 CA LEU 23 4.410 34.091 38.028 1.00 0.43 C ATOM 166 C LEU 23 5.063 34.741 36.858 1.00 0.43 C ATOM 167 O LEU 23 5.205 35.960 36.816 1.00 0.43 O ATOM 168 CB LEU 23 2.926 34.439 38.164 1.00 0.43 C ATOM 169 CG LEU 23 2.029 34.055 36.986 1.00 0.43 C ATOM 170 CD1 LEU 23 1.991 32.544 36.816 1.00 0.43 C ATOM 171 CD2 LEU 23 0.625 34.604 37.184 1.00 0.43 C ATOM 172 N ALA 24 5.508 33.934 35.880 1.00 0.62 N ATOM 173 CA ALA 24 6.100 34.537 34.726 1.00 0.62 C ATOM 174 C ALA 24 5.472 33.909 33.531 1.00 0.62 C ATOM 175 O ALA 24 5.281 32.694 33.484 1.00 0.62 O ATOM 176 CB ALA 24 7.610 34.354 34.744 1.00 0.62 C ATOM 177 N ALA 25 5.103 34.737 32.538 1.00 0.62 N ATOM 178 CA ALA 25 4.546 34.187 31.340 1.00 0.62 C ATOM 179 C ALA 25 4.683 35.227 30.286 1.00 0.62 C ATOM 180 O ALA 25 4.616 36.422 30.568 1.00 0.62 O ATOM 181 CB ALA 25 3.098 33.778 31.565 1.00 0.62 C ATOM 182 N ASN 26 4.900 34.795 29.031 1.00 0.45 N ATOM 183 CA ASN 26 5.009 35.757 27.979 1.00 0.45 C ATOM 184 C ASN 26 4.145 35.281 26.867 1.00 0.45 C ATOM 185 O ASN 26 4.081 34.084 26.587 1.00 0.45 O ATOM 186 CB ASN 26 6.470 35.919 27.551 1.00 0.45 C ATOM 187 CG ASN 26 7.341 36.490 28.652 1.00 0.45 C ATOM 188 OD1 ASN 26 7.382 37.702 28.858 1.00 0.45 O ATOM 189 ND2 ASN 26 8.045 35.616 29.364 1.00 0.45 N ATOM 190 N GLU 27 3.425 36.213 26.219 1.00 0.48 N ATOM 191 CA GLU 27 2.611 35.827 25.109 1.00 0.48 C ATOM 192 C GLU 27 2.967 36.718 23.966 1.00 0.48 C ATOM 193 O GLU 27 3.073 37.931 24.129 1.00 0.48 O ATOM 194 CB GLU 27 1.128 35.924 25.473 1.00 0.48 C ATOM 195 CG GLU 27 0.702 34.987 26.592 1.00 0.48 C ATOM 196 CD GLU 27 0.696 33.532 26.166 1.00 0.48 C ATOM 197 OE1 GLU 27 0.626 33.268 24.947 1.00 0.48 O ATOM 198 OE2 GLU 27 0.761 32.652 27.051 1.00 0.48 O ATOM 199 N LEU 28 3.183 36.131 22.774 1.00 0.48 N ATOM 200 CA LEU 28 3.464 36.947 21.632 1.00 0.48 C ATOM 201 C LEU 28 2.180 37.008 20.882 1.00 0.48 C ATOM 202 O LEU 28 1.817 36.053 20.196 1.00 0.48 O ATOM 203 CB LEU 28 4.616 36.352 20.819 1.00 0.48 C ATOM 204 CG LEU 28 5.947 36.182 21.553 1.00 0.48 C ATOM 205 CD1 LEU 28 6.965 35.495 20.656 1.00 0.48 C ATOM 206 CD2 LEU 28 6.473 37.530 22.020 1.00 0.48 C ATOM 207 N ARG 29 1.446 38.129 20.991 1.00 0.50 N ATOM 208 CA ARG 29 0.187 38.153 20.315 1.00 0.50 C ATOM 209 C ARG 29 0.083 39.430 19.554 1.00 0.50 C ATOM 210 O ARG 29 0.294 40.515 20.095 1.00 0.50 O ATOM 211 CB ARG 29 -0.960 38.001 21.315 1.00 0.50 C ATOM 212 CG ARG 29 -0.961 36.677 22.063 1.00 0.50 C ATOM 213 CD ARG 29 -1.323 35.520 21.147 1.00 0.50 C ATOM 214 NE ARG 29 -1.371 34.248 21.864 1.00 0.50 N ATOM 215 CZ ARG 29 -0.325 33.449 22.051 1.00 0.50 C ATOM 216 NH1 ARG 29 0.863 33.789 21.570 1.00 0.50 N ATOM 217 NH2 ARG 29 -0.469 32.311 22.717 1.00 0.50 N ATOM 218 N VAL 30 -0.223 39.320 18.249 1.00 0.51 N ATOM 219 CA VAL 30 -0.439 40.499 17.475 1.00 0.51 C ATOM 220 C VAL 30 -1.776 40.323 16.845 1.00 0.51 C ATOM 221 O VAL 30 -1.991 39.385 16.079 1.00 0.51 O ATOM 222 CB VAL 30 0.684 40.706 16.432 1.00 0.51 C ATOM 223 CG1 VAL 30 0.422 41.958 15.609 1.00 0.51 C ATOM 224 CG2 VAL 30 2.038 40.795 17.119 1.00 0.51 C ATOM 225 N THR 31 -2.731 41.210 17.166 1.00 0.53 N ATOM 226 CA THR 31 -4.005 41.065 16.541 1.00 0.53 C ATOM 227 C THR 31 -4.484 42.418 16.151 1.00 0.53 C ATOM 228 O THR 31 -4.491 43.348 16.956 1.00 0.53 O ATOM 229 CB THR 31 -5.017 40.374 17.475 1.00 0.53 C ATOM 230 OG1 THR 31 -4.520 39.084 17.849 1.00 0.53 O ATOM 231 CG2 THR 31 -6.358 40.203 16.776 1.00 0.53 C ATOM 232 N GLU 32 -4.874 42.561 14.876 1.00 0.54 N ATOM 233 CA GLU 32 -5.453 43.789 14.430 1.00 0.54 C ATOM 234 C GLU 32 -6.806 43.409 13.938 1.00 0.54 C ATOM 235 O GLU 32 -6.936 42.565 13.054 1.00 0.54 O ATOM 236 CB GLU 32 -4.573 44.437 13.359 1.00 0.54 C ATOM 237 CG GLU 32 -3.204 44.868 13.858 1.00 0.54 C ATOM 238 CD GLU 32 -2.359 45.503 12.771 1.00 0.54 C ATOM 239 OE1 GLU 32 -2.851 45.628 11.630 1.00 0.54 O ATOM 240 OE2 GLU 32 -1.199 45.874 13.058 1.00 0.54 O ATOM 241 N ARG 33 -7.863 44.012 14.509 1.00 0.53 N ATOM 242 CA ARG 33 -9.175 43.617 14.101 1.00 0.53 C ATOM 243 C ARG 33 -9.327 43.942 12.654 1.00 0.53 C ATOM 244 O ARG 33 -9.823 43.120 11.887 1.00 0.53 O ATOM 245 CB ARG 33 -10.235 44.317 14.953 1.00 0.53 C ATOM 246 CG ARG 33 -10.308 43.818 16.387 1.00 0.53 C ATOM 247 CD ARG 33 -11.558 44.322 17.089 1.00 0.53 C ATOM 248 NE ARG 33 -11.573 45.778 17.201 1.00 0.53 N ATOM 249 CZ ARG 33 -11.031 46.461 18.206 1.00 0.53 C ATOM 250 NH1 ARG 33 -10.425 45.819 19.195 1.00 0.53 N ATOM 251 NH2 ARG 33 -11.096 47.786 18.218 1.00 0.53 N ATOM 252 N PRO 34 -8.913 45.108 12.242 1.00 0.52 N ATOM 253 CA PRO 34 -8.977 45.399 10.843 1.00 0.52 C ATOM 254 C PRO 34 -7.810 44.719 10.217 1.00 0.52 C ATOM 255 O PRO 34 -6.826 44.485 10.912 1.00 0.52 O ATOM 256 CB PRO 34 -8.895 46.926 10.800 1.00 0.52 C ATOM 257 CG PRO 34 -8.086 47.292 12.003 1.00 0.52 C ATOM 258 CD PRO 34 -8.469 46.292 13.063 1.00 0.52 C ATOM 259 N PHE 35 -7.894 44.371 8.924 1.00 0.47 N ATOM 260 CA PHE 35 -6.757 43.761 8.304 1.00 0.47 C ATOM 261 C PHE 35 -6.392 44.617 7.143 1.00 0.47 C ATOM 262 O PHE 35 -7.209 45.386 6.641 1.00 0.47 O ATOM 263 CB PHE 35 -7.079 42.323 7.892 1.00 0.47 C ATOM 264 CG PHE 35 -7.397 41.419 9.045 1.00 0.47 C ATOM 265 CD1 PHE 35 -8.713 41.221 9.449 1.00 0.47 C ATOM 266 CD2 PHE 35 -6.384 40.761 9.733 1.00 0.47 C ATOM 267 CE1 PHE 35 -9.010 40.381 10.520 1.00 0.47 C ATOM 268 CE2 PHE 35 -6.680 39.922 10.805 1.00 0.47 C ATOM 269 CZ PHE 35 -7.986 39.731 11.198 1.00 0.47 C ATOM 270 N TRP 36 -5.126 44.531 6.701 1.00 0.45 N ATOM 271 CA TRP 36 -4.745 45.314 5.570 1.00 0.45 C ATOM 272 C TRP 36 -4.738 44.373 4.414 1.00 0.45 C ATOM 273 O TRP 36 -4.140 43.299 4.479 1.00 0.45 O ATOM 274 CB TRP 36 -3.387 45.976 5.809 1.00 0.45 C ATOM 275 CG TRP 36 -3.413 47.049 6.857 1.00 0.45 C ATOM 276 CD1 TRP 36 -3.009 46.935 8.156 1.00 0.45 C ATOM 277 CD2 TRP 36 -3.868 48.398 6.691 1.00 0.45 C ATOM 278 NE1 TRP 36 -3.183 48.131 8.813 1.00 0.45 N ATOM 279 CE2 TRP 36 -3.710 49.048 7.936 1.00 0.45 C ATOM 280 CE3 TRP 36 -4.392 49.119 5.612 1.00 0.45 C ATOM 281 CZ2 TRP 36 -4.060 50.389 8.129 1.00 0.45 C ATOM 282 CZ3 TRP 36 -4.740 50.453 5.806 1.00 0.45 C ATOM 283 CH2 TRP 36 -4.571 51.072 7.056 1.00 0.45 C ATOM 284 N ILE 37 -5.435 44.751 3.327 1.00 0.45 N ATOM 285 CA ILE 37 -5.498 43.898 2.184 1.00 0.45 C ATOM 286 C ILE 37 -4.899 44.646 1.047 1.00 0.45 C ATOM 287 O ILE 37 -5.026 45.865 0.955 1.00 0.45 O ATOM 288 CB ILE 37 -6.950 43.463 1.880 1.00 0.45 C ATOM 289 CG1 ILE 37 -7.820 44.686 1.583 1.00 0.45 C ATOM 290 CG2 ILE 37 -7.523 42.669 3.045 1.00 0.45 C ATOM 291 CD1 ILE 37 -9.207 44.346 1.072 1.00 0.45 C ATOM 292 N SER 38 -4.205 43.920 0.150 1.00 0.51 N ATOM 293 CA SER 38 -3.579 44.592 -0.944 1.00 0.51 C ATOM 294 C SER 38 -4.452 44.433 -2.142 1.00 0.51 C ATOM 295 O SER 38 -4.950 43.348 -2.433 1.00 0.51 O ATOM 296 CB SER 38 -2.176 44.030 -1.186 1.00 0.51 C ATOM 297 OG SER 38 -1.589 44.620 -2.333 1.00 0.51 O ATOM 298 N SER 39 -4.670 45.549 -2.859 1.00 0.56 N ATOM 299 CA SER 39 -5.452 45.520 -4.055 1.00 0.56 C ATOM 300 C SER 39 -4.626 46.199 -5.091 1.00 0.56 C ATOM 301 O SER 39 -3.815 47.067 -4.779 1.00 0.56 O ATOM 302 CB SER 39 -6.804 46.199 -3.828 1.00 0.56 C ATOM 303 OG SER 39 -7.552 45.513 -2.840 1.00 0.56 O ATOM 304 N PHE 40 -4.795 45.796 -6.361 1.00 0.48 N ATOM 305 CA PHE 40 -4.018 46.401 -7.399 1.00 0.48 C ATOM 306 C PHE 40 -5.002 46.928 -8.389 1.00 0.48 C ATOM 307 O PHE 40 -6.125 46.437 -8.474 1.00 0.48 O ATOM 308 CB PHE 40 -3.049 45.385 -8.005 1.00 0.48 C ATOM 309 CG PHE 40 -2.011 44.888 -7.043 1.00 0.48 C ATOM 310 CD1 PHE 40 -2.275 43.810 -6.207 1.00 0.48 C ATOM 311 CD2 PHE 40 -0.763 45.498 -6.969 1.00 0.48 C ATOM 312 CE1 PHE 40 -1.310 43.350 -5.313 1.00 0.48 C ATOM 313 CE2 PHE 40 0.202 45.038 -6.076 1.00 0.48 C ATOM 314 CZ PHE 40 -0.068 43.971 -5.251 1.00 0.48 C ATOM 315 N ILE 41 -4.613 47.957 -9.163 1.00 0.48 N ATOM 316 CA ILE 41 -5.559 48.513 -10.079 1.00 0.48 C ATOM 317 C ILE 41 -5.271 47.977 -11.442 1.00 0.48 C ATOM 318 O ILE 41 -4.204 48.195 -12.014 1.00 0.48 O ATOM 319 CB ILE 41 -5.513 50.059 -10.073 1.00 0.48 C ATOM 320 CG1 ILE 41 -5.850 50.593 -8.679 1.00 0.48 C ATOM 321 CG2 ILE 41 -6.473 50.624 -11.109 1.00 0.48 C ATOM 322 CD1 ILE 41 -5.599 52.078 -8.511 1.00 0.48 C ATOM 323 N GLY 42 -6.233 47.206 -11.975 1.00 0.52 N ATOM 324 CA GLY 42 -6.098 46.684 -13.298 1.00 0.52 C ATOM 325 C GLY 42 -5.215 45.489 -13.221 1.00 0.52 C ATOM 326 O GLY 42 -4.320 45.405 -12.380 1.00 0.52 O ATOM 327 N ARG 43 -5.457 44.521 -14.117 1.00 0.49 N ATOM 328 CA ARG 43 -4.626 43.366 -14.203 1.00 0.49 C ATOM 329 C ARG 43 -4.548 43.098 -15.665 1.00 0.49 C ATOM 330 O ARG 43 -5.534 43.270 -16.379 1.00 0.49 O ATOM 331 CB ARG 43 -5.224 42.214 -13.390 1.00 0.49 C ATOM 332 CG ARG 43 -4.394 40.942 -13.416 1.00 0.49 C ATOM 333 CD ARG 43 -4.988 39.872 -12.514 1.00 0.49 C ATOM 334 NE ARG 43 -4.927 40.248 -11.104 1.00 0.49 N ATOM 335 CZ ARG 43 -5.455 39.539 -10.111 1.00 0.49 C ATOM 336 NH1 ARG 43 -6.090 38.403 -10.372 1.00 0.49 N ATOM 337 NH2 ARG 43 -5.347 39.965 -8.860 1.00 0.49 N ATOM 338 N SER 44 -3.370 42.692 -16.165 1.00 0.55 N ATOM 339 CA SER 44 -3.318 42.471 -17.575 1.00 0.55 C ATOM 340 C SER 44 -4.154 41.277 -17.856 1.00 0.55 C ATOM 341 O SER 44 -4.315 40.399 -17.010 1.00 0.55 O ATOM 342 CB SER 44 -1.870 42.289 -18.037 1.00 0.55 C ATOM 343 OG SER 44 -1.319 41.096 -17.507 1.00 0.55 O ATOM 344 N LYS 45 -4.730 41.222 -19.070 1.00 0.50 N ATOM 345 CA LYS 45 -5.554 40.103 -19.399 1.00 0.50 C ATOM 346 C LYS 45 -4.861 39.352 -20.486 1.00 0.50 C ATOM 347 O LYS 45 -4.168 39.930 -21.321 1.00 0.50 O ATOM 348 CB LYS 45 -6.950 40.571 -19.817 1.00 0.50 C ATOM 349 CG LYS 45 -7.666 41.404 -18.767 1.00 0.50 C ATOM 350 CD LYS 45 -7.943 40.598 -17.510 1.00 0.50 C ATOM 351 CE LYS 45 -8.754 41.396 -16.503 1.00 0.50 C ATOM 352 NZ LYS 45 -8.972 40.642 -15.237 1.00 0.50 N TER END