####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS460_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS460_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.50 4.50 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 9 - 29 1.99 5.73 LCS_AVERAGE: 36.21 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.54 5.89 LCS_AVERAGE: 16.94 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 44 3 3 3 4 14 22 26 29 35 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT V 3 V 3 3 7 44 4 4 8 11 13 22 26 29 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT Q 4 Q 4 3 7 44 3 4 5 12 17 23 26 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT G 5 G 5 3 7 44 4 6 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT P 6 P 6 3 7 44 2 3 4 7 17 23 29 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT W 7 W 7 3 7 44 3 3 4 8 9 16 25 34 35 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT V 8 V 8 3 12 44 3 3 6 10 21 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT G 9 G 9 9 21 44 8 10 13 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT S 10 S 10 9 21 44 8 10 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT S 11 S 11 9 21 44 8 10 10 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT Y 12 Y 12 9 21 44 8 10 11 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT V 13 V 13 9 21 44 8 10 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT A 14 A 14 9 21 44 8 10 11 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT E 15 E 15 9 21 44 8 10 11 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT T 16 T 16 9 21 44 8 10 11 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT G 17 G 17 9 21 44 5 10 11 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT Q 18 Q 18 3 21 44 3 3 4 9 17 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT N 19 N 19 3 21 44 3 4 4 8 15 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT W 20 W 20 12 21 44 10 12 13 15 21 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT A 21 A 21 12 21 44 10 12 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT S 22 S 22 12 21 44 10 12 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT L 23 L 23 12 21 44 10 12 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT A 24 A 24 12 21 44 10 12 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT A 25 A 25 12 21 44 10 12 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT N 26 N 26 12 21 44 10 12 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT E 27 E 27 12 21 44 10 12 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT L 28 L 28 12 21 44 10 12 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT R 29 R 29 12 21 44 10 12 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT V 30 V 30 12 17 44 3 12 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT T 31 T 31 12 17 44 5 12 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT E 32 E 32 3 17 44 3 3 3 5 6 14 23 28 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT R 33 R 33 3 17 44 3 3 5 14 19 25 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT P 34 P 34 3 17 44 3 3 3 5 8 14 18 23 27 33 35 40 41 42 42 42 43 43 43 43 LCS_GDT F 35 F 35 3 17 44 3 3 12 14 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT W 36 W 36 5 17 44 3 4 9 17 21 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT I 37 I 37 5 10 44 4 4 9 17 21 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT S 38 S 38 5 10 44 4 4 8 16 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT S 39 S 39 7 10 44 4 6 9 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT F 40 F 40 7 10 44 4 6 8 11 15 23 29 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT I 41 I 41 7 10 44 4 7 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT G 42 G 42 7 10 44 4 6 8 11 11 11 20 29 34 37 40 40 41 42 42 42 43 43 43 43 LCS_GDT R 43 R 43 7 10 44 4 6 8 11 11 11 13 15 16 26 31 36 41 42 42 42 43 43 43 43 LCS_GDT S 44 S 44 7 10 44 3 6 8 11 11 11 12 14 15 19 22 27 30 35 37 40 43 43 43 43 LCS_GDT K 45 K 45 7 10 44 0 3 7 11 11 11 12 14 14 16 18 22 24 26 31 35 36 38 38 42 LCS_AVERAGE LCS_A: 51.05 ( 16.94 36.21 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 14 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 GDT PERCENT_AT 22.73 27.27 31.82 38.64 50.00 59.09 72.73 79.55 81.82 88.64 90.91 90.91 93.18 95.45 95.45 95.45 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.33 0.54 1.21 1.37 1.73 2.00 2.37 2.62 2.72 2.99 3.14 3.14 3.28 3.55 3.55 3.55 3.93 3.93 3.93 3.93 GDT RMS_ALL_AT 5.84 5.89 4.75 4.78 4.87 5.03 5.15 4.95 4.95 4.81 4.72 4.72 4.71 4.62 4.62 4.62 4.54 4.54 4.54 4.54 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 5.961 0 0.071 0.103 6.508 0.000 0.000 - LGA V 3 V 3 5.282 0 0.226 1.029 6.237 1.818 1.039 6.237 LGA Q 4 Q 4 4.341 0 0.066 0.658 6.288 10.909 4.848 5.050 LGA G 5 G 5 1.788 0 0.171 0.171 4.705 24.545 24.545 - LGA P 6 P 6 4.476 0 0.340 0.345 5.611 4.545 2.857 5.611 LGA W 7 W 7 5.389 0 0.397 1.037 11.386 2.727 0.779 11.386 LGA V 8 V 8 2.899 0 0.134 0.879 6.110 35.000 24.156 3.438 LGA G 9 G 9 2.451 0 0.510 0.510 2.451 55.000 55.000 - LGA S 10 S 10 0.272 0 0.135 0.163 1.339 78.182 76.667 1.339 LGA S 11 S 11 3.097 0 0.057 0.596 4.398 27.727 22.424 3.343 LGA Y 12 Y 12 2.157 0 0.118 0.859 10.558 51.818 19.394 10.558 LGA V 13 V 13 0.965 0 0.060 1.130 4.781 74.545 61.818 4.781 LGA A 14 A 14 2.904 0 0.014 0.019 3.634 26.818 25.091 - LGA E 15 E 15 3.077 0 0.096 1.170 4.810 22.727 18.384 4.355 LGA T 16 T 16 1.314 0 0.193 0.274 1.691 61.818 68.052 0.569 LGA G 17 G 17 2.271 0 0.669 0.669 3.205 36.364 36.364 - LGA Q 18 Q 18 3.618 0 0.577 0.490 8.122 11.818 5.253 8.017 LGA N 19 N 19 3.483 0 0.249 1.205 9.744 29.545 14.773 7.099 LGA W 20 W 20 3.187 0 0.377 0.678 9.967 33.636 9.740 9.967 LGA A 21 A 21 1.696 0 0.076 0.070 2.277 55.000 54.182 - LGA S 22 S 22 1.458 0 0.038 0.615 2.045 61.818 56.061 1.779 LGA L 23 L 23 1.744 0 0.098 1.403 6.249 58.182 34.318 4.798 LGA A 24 A 24 1.772 0 0.023 0.021 2.072 54.545 51.273 - LGA A 25 A 25 0.853 0 0.052 0.052 1.156 77.727 82.182 - LGA N 26 N 26 0.601 0 0.079 0.341 1.367 82.273 80.227 1.157 LGA E 27 E 27 1.332 0 0.094 0.781 3.199 59.091 41.616 3.175 LGA L 28 L 28 1.931 0 0.190 1.408 5.267 41.818 26.364 5.267 LGA R 29 R 29 1.874 0 0.222 1.502 10.899 54.545 22.479 10.899 LGA V 30 V 30 1.702 0 0.266 1.156 2.990 58.182 49.870 2.990 LGA T 31 T 31 1.808 0 0.712 0.902 6.286 41.364 27.792 3.209 LGA E 32 E 32 5.283 0 0.327 1.060 9.605 6.818 3.030 9.605 LGA R 33 R 33 3.977 0 0.047 1.120 7.758 4.091 5.620 5.780 LGA P 34 P 34 6.717 0 0.661 0.628 7.797 0.000 0.000 7.797 LGA F 35 F 35 3.169 0 0.557 0.889 10.201 18.182 7.603 10.201 LGA W 36 W 36 3.623 0 0.591 0.535 8.480 23.636 6.753 8.333 LGA I 37 I 37 3.641 0 0.156 0.861 6.593 27.727 14.091 6.593 LGA S 38 S 38 2.339 0 0.051 0.637 5.924 38.636 26.667 5.924 LGA S 39 S 39 2.888 0 0.156 0.681 4.859 28.182 22.121 4.759 LGA F 40 F 40 3.640 0 0.083 0.437 9.777 17.727 6.942 9.276 LGA I 41 I 41 1.428 0 0.114 0.639 5.514 34.091 24.091 5.514 LGA G 42 G 42 7.493 0 0.099 0.099 11.170 0.455 0.455 - LGA R 43 R 43 10.476 0 0.112 0.781 16.894 0.000 0.000 16.894 LGA S 44 S 44 13.690 0 0.628 0.611 14.977 0.000 0.000 14.184 LGA K 45 K 45 17.794 0 0.422 0.932 20.978 0.000 0.000 20.978 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.498 4.498 5.986 32.583 25.339 10.701 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 35 2.62 60.227 57.866 1.286 LGA_LOCAL RMSD: 2.622 Number of atoms: 35 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.945 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.498 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.715534 * X + -0.524642 * Y + -0.461262 * Z + 33.144424 Y_new = 0.349313 * X + -0.303106 * Y + 0.886627 * Z + -27.876438 Z_new = -0.604973 * X + -0.795536 * Y + -0.033618 * Z + 95.397987 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.454151 0.649732 -1.613030 [DEG: 26.0210 37.2269 -92.4198 ] ZXZ: -2.661882 1.604421 -2.491431 [DEG: -152.5146 91.9265 -142.7485 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS460_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS460_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 35 2.62 57.866 4.50 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS460_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 9 N ALA 2 9.209 41.233 12.687 1.00 11.18 ATOM 8 CA ALA 2 9.279 41.694 11.308 1.00 11.18 ATOM 11 CB ALA 2 9.347 43.225 11.261 1.00 11.18 ATOM 12 C ALA 2 10.478 41.121 10.590 1.00 11.18 ATOM 13 O ALA 2 11.564 41.027 11.144 1.00 11.18 ATOM 15 N VAL 3 10.250 40.720 9.400 1.00 9.72 ATOM 14 CA VAL 3 11.260 40.259 8.491 1.00 9.72 ATOM 17 CB VAL 3 11.494 38.748 8.491 1.00 9.72 ATOM 18 C VAL 3 10.912 40.785 7.173 1.00 9.72 ATOM 19 O VAL 3 10.012 41.527 7.075 1.00 9.72 ATOM 20 CG1 VAL 3 12.084 38.292 9.860 1.00 9.72 ATOM 21 CG2 VAL 3 10.208 38.006 8.186 1.00 9.72 ATOM 23 N GLN 4 11.631 40.473 6.175 1.00 9.20 ATOM 22 CA GLN 4 11.280 40.935 4.865 1.00 9.20 ATOM 25 CB GLN 4 12.486 41.493 4.103 1.00 9.20 ATOM 26 C GLN 4 10.438 39.901 4.104 1.00 9.20 ATOM 27 O GLN 4 10.389 38.725 4.476 1.00 9.20 ATOM 28 CG GLN 4 13.522 42.121 5.041 1.00 9.20 ATOM 29 CD GLN 4 14.731 41.310 5.340 1.00 9.20 ATOM 30 NE2 GLN 4 15.912 42.011 5.333 1.00 9.20 ATOM 33 OE1 GLN 4 14.640 40.085 5.649 1.00 9.20 ATOM 35 N GLY 5 9.762 40.367 3.130 1.00 9.13 ATOM 34 CA GLY 5 8.800 39.583 2.369 1.00 9.13 ATOM 37 C GLY 5 7.391 40.051 2.726 1.00 9.13 ATOM 38 O GLY 5 7.038 40.043 3.880 1.00 9.13 ATOM 40 N PRO 6 6.542 40.388 1.704 1.00 9.36 ATOM 39 CA PRO 6 5.123 40.886 1.926 1.00 9.36 ATOM 41 CB PRO 6 4.822 41.559 0.627 1.00 9.36 ATOM 42 C PRO 6 4.126 39.808 2.210 1.00 9.36 ATOM 43 O PRO 6 3.078 39.707 1.550 1.00 9.36 ATOM 44 CG PRO 6 5.525 40.684 -0.379 1.00 9.36 ATOM 45 CD PRO 6 6.851 40.288 0.303 1.00 9.36 ATOM 47 N TRP 7 4.393 39.058 3.195 1.00 9.87 ATOM 46 CA TRP 7 3.559 37.949 3.578 1.00 9.87 ATOM 49 CB TRP 7 3.506 36.885 2.449 1.00 9.87 ATOM 50 C TRP 7 3.971 37.380 4.840 1.00 9.87 ATOM 51 O TRP 7 5.117 37.341 5.110 1.00 9.87 ATOM 52 CG TRP 7 2.622 35.627 2.724 1.00 9.87 ATOM 53 CD1 TRP 7 3.035 34.333 2.677 1.00 9.87 ATOM 54 NE1 TRP 7 1.993 33.489 3.013 1.00 9.87 ATOM 56 CD2 TRP 7 1.230 35.597 3.133 1.00 9.87 ATOM 57 CE2 TRP 7 0.895 34.242 3.353 1.00 9.87 ATOM 58 CE3 TRP 7 0.322 36.577 3.508 1.00 9.87 ATOM 59 CZ3 TRP 7 -0.854 36.194 4.176 1.00 9.87 ATOM 60 CH2 TRP 7 -1.136 34.849 4.421 1.00 9.87 ATOM 61 CZ2 TRP 7 -0.315 33.856 3.975 1.00 9.87 ATOM 63 N VAL 8 3.023 36.906 5.616 1.00 9.58 ATOM 62 CA VAL 8 3.323 36.228 6.856 1.00 9.58 ATOM 65 CB VAL 8 2.078 35.513 7.420 1.00 9.58 ATOM 66 C VAL 8 4.423 35.218 6.556 1.00 9.58 ATOM 67 O VAL 8 5.420 35.210 7.223 1.00 9.58 ATOM 68 CG1 VAL 8 1.805 34.278 6.612 1.00 9.58 ATOM 69 CG2 VAL 8 2.270 35.125 8.881 1.00 9.58 ATOM 71 N GLY 9 4.196 34.376 5.547 1.00 9.84 ATOM 70 CA GLY 9 5.216 33.376 5.012 1.00 9.84 ATOM 73 C GLY 9 5.045 31.939 5.486 1.00 9.84 ATOM 74 O GLY 9 4.582 31.692 6.577 1.00 9.84 ATOM 76 N SER 10 5.522 31.007 4.702 1.00 9.49 ATOM 75 CA SER 10 5.307 29.647 5.002 1.00 9.49 ATOM 78 CB SER 10 5.818 28.791 3.874 1.00 9.49 ATOM 79 C SER 10 5.999 29.250 6.243 1.00 9.49 ATOM 80 O SER 10 5.411 28.664 7.073 1.00 9.49 ATOM 81 OG SER 10 7.222 28.913 3.778 1.00 9.49 ATOM 83 N SER 11 7.189 29.647 6.458 1.00 9.71 ATOM 82 CA SER 11 7.830 29.182 7.632 1.00 9.71 ATOM 85 CB SER 11 9.287 29.516 7.609 1.00 9.71 ATOM 86 C SER 11 7.216 29.804 8.828 1.00 9.71 ATOM 87 O SER 11 7.121 29.187 9.845 1.00 9.71 ATOM 88 OG SER 11 9.442 30.878 7.707 1.00 9.71 ATOM 90 N TYR 12 6.710 31.014 8.692 1.00 9.97 ATOM 89 CA TYR 12 6.118 31.674 9.795 1.00 9.97 ATOM 92 CB TYR 12 6.043 33.207 9.626 1.00 9.97 ATOM 93 C TYR 12 4.884 30.962 10.188 1.00 9.97 ATOM 94 O TYR 12 4.716 30.638 11.326 1.00 9.97 ATOM 95 CG TYR 12 5.631 33.982 10.884 1.00 9.97 ATOM 96 CD1 TYR 12 6.058 33.557 12.138 1.00 9.97 ATOM 97 CE1 TYR 12 5.698 34.253 13.297 1.00 9.97 ATOM 98 CZ TYR 12 4.954 35.412 13.190 1.00 9.97 ATOM 99 CD2 TYR 12 4.919 35.165 10.801 1.00 9.97 ATOM 100 CE2 TYR 12 4.591 35.897 11.953 1.00 9.97 ATOM 101 OH TYR 12 4.644 36.139 14.336 1.00 9.97 ATOM 103 N VAL 13 4.034 30.594 9.207 1.00 9.41 ATOM 102 CA VAL 13 2.836 29.863 9.526 1.00 9.41 ATOM 105 CB VAL 13 1.913 29.768 8.426 1.00 9.41 ATOM 106 C VAL 13 3.186 28.514 10.080 1.00 9.41 ATOM 107 O VAL 13 2.660 28.134 10.995 1.00 9.41 ATOM 108 CG1 VAL 13 1.398 31.150 8.043 1.00 9.41 ATOM 109 CG2 VAL 13 2.521 29.071 7.250 1.00 9.41 ATOM 111 N ALA 14 4.159 27.871 9.551 1.00 9.48 ATOM 110 CA ALA 14 4.594 26.566 10.083 1.00 9.48 ATOM 113 CB ALA 14 5.710 26.032 9.248 1.00 9.48 ATOM 114 C ALA 14 5.064 26.695 11.530 1.00 9.48 ATOM 115 O ALA 14 4.726 25.851 12.368 1.00 9.48 ATOM 117 N GLU 15 5.800 27.787 11.866 1.00 9.33 ATOM 116 CA GLU 15 6.222 27.994 13.195 1.00 9.33 ATOM 119 CB GLU 15 7.169 29.208 13.364 1.00 9.33 ATOM 120 C GLU 15 5.141 28.185 14.065 1.00 9.33 ATOM 121 O GLU 15 5.195 27.737 15.150 1.00 9.33 ATOM 122 CG GLU 15 8.554 29.013 12.913 1.00 9.33 ATOM 123 CD GLU 15 9.425 30.236 13.167 1.00 9.33 ATOM 124 OE1 GLU 15 10.404 30.166 14.055 1.00 9.33 ATOM 125 OE2 GLU 15 9.165 31.282 12.528 1.00 9.33 ATOM 127 N THR 16 4.118 28.915 13.623 1.00 8.74 ATOM 126 CA THR 16 3.043 29.237 14.469 1.00 8.74 ATOM 129 CB THR 16 2.477 30.611 14.115 1.00 8.74 ATOM 130 C THR 16 1.951 28.146 14.473 1.00 8.74 ATOM 131 O THR 16 1.557 27.658 15.564 1.00 8.74 ATOM 132 CG2 THR 16 3.510 31.703 14.357 1.00 8.74 ATOM 133 OG1 THR 16 2.124 30.636 12.753 1.00 8.74 ATOM 135 N GLY 17 1.470 27.729 13.263 1.00 7.88 ATOM 134 CA GLY 17 0.534 26.640 13.201 1.00 7.88 ATOM 137 C GLY 17 -0.326 26.547 11.949 1.00 7.88 ATOM 138 O GLY 17 -0.226 27.350 11.036 1.00 7.88 ATOM 140 N GLN 18 -1.267 25.563 11.946 1.00 7.43 ATOM 139 CA GLN 18 -2.146 25.364 10.775 1.00 7.43 ATOM 142 CB GLN 18 -2.507 23.902 10.560 1.00 7.43 ATOM 143 C GLN 18 -3.369 26.239 10.833 1.00 7.43 ATOM 144 O GLN 18 -4.326 26.026 10.112 1.00 7.43 ATOM 145 CG GLN 18 -1.352 22.979 10.778 1.00 7.43 ATOM 146 CD GLN 18 -0.274 23.203 9.735 1.00 7.43 ATOM 147 NE2 GLN 18 0.940 23.477 10.181 1.00 7.43 ATOM 150 OE1 GLN 18 -0.548 23.181 8.526 1.00 7.43 ATOM 152 N ASN 19 -3.311 27.251 11.654 1.00 6.99 ATOM 151 CA ASN 19 -4.368 28.235 11.740 1.00 6.99 ATOM 154 CB ASN 19 -4.848 28.347 13.197 1.00 6.99 ATOM 155 C ASN 19 -3.740 29.540 11.222 1.00 6.99 ATOM 156 O ASN 19 -4.259 30.677 11.395 1.00 6.99 ATOM 157 CG ASN 19 -6.288 28.781 13.290 1.00 6.99 ATOM 158 ND2 ASN 19 -6.681 29.357 14.408 1.00 6.99 ATOM 161 OD1 ASN 19 -7.094 28.527 12.353 1.00 6.99 ATOM 163 N TRP 20 -2.609 29.281 10.546 1.00 6.73 ATOM 162 CA TRP 20 -1.741 30.235 9.900 1.00 6.73 ATOM 165 CB TRP 20 -2.193 30.269 8.451 1.00 6.73 ATOM 166 C TRP 20 -1.771 31.688 10.433 1.00 6.73 ATOM 167 O TRP 20 -1.453 31.964 11.594 1.00 6.73 ATOM 168 CG TRP 20 -1.700 29.170 7.623 1.00 6.73 ATOM 169 CD1 TRP 20 -1.762 27.818 7.893 1.00 6.73 ATOM 170 NE1 TRP 20 -1.274 27.111 6.832 1.00 6.73 ATOM 172 CD2 TRP 20 -1.164 29.294 6.341 1.00 6.73 ATOM 173 CE2 TRP 20 -0.933 27.974 5.852 1.00 6.73 ATOM 174 CE3 TRP 20 -0.885 30.349 5.539 1.00 6.73 ATOM 175 CZ3 TRP 20 -0.347 30.111 4.303 1.00 6.73 ATOM 176 CH2 TRP 20 -0.128 28.809 3.854 1.00 6.73 ATOM 177 CZ2 TRP 20 -0.417 27.738 4.622 1.00 6.73 ATOM 179 N ALA 21 -2.192 32.606 9.557 1.00 6.68 ATOM 178 CA ALA 21 -2.156 34.032 9.841 1.00 6.68 ATOM 181 CB ALA 21 -2.508 34.902 8.582 1.00 6.68 ATOM 182 C ALA 21 -2.980 34.378 11.006 1.00 6.68 ATOM 183 O ALA 21 -2.535 35.099 11.841 1.00 6.68 ATOM 185 N SER 22 -4.139 33.786 11.151 1.00 7.23 ATOM 184 CA SER 22 -5.002 34.133 12.291 1.00 7.23 ATOM 187 CB SER 22 -6.253 33.330 12.181 1.00 7.23 ATOM 188 C SER 22 -4.314 33.751 13.587 1.00 7.23 ATOM 189 O SER 22 -4.251 34.538 14.524 1.00 7.23 ATOM 190 OG SER 22 -6.941 33.666 11.009 1.00 7.23 ATOM 192 N LEU 23 -3.706 32.599 13.596 1.00 7.45 ATOM 191 CA LEU 23 -3.036 32.123 14.773 1.00 7.45 ATOM 194 CB LEU 23 -2.595 30.707 14.614 1.00 7.45 ATOM 195 C LEU 23 -1.929 32.997 15.100 1.00 7.45 ATOM 196 O LEU 23 -1.776 33.356 16.205 1.00 7.45 ATOM 197 CG LEU 23 -1.868 30.095 15.741 1.00 7.45 ATOM 198 CD1 LEU 23 -2.746 30.098 16.961 1.00 7.45 ATOM 199 CD2 LEU 23 -1.508 28.662 15.370 1.00 7.45 ATOM 201 N ALA 24 -1.178 33.433 14.078 1.00 7.58 ATOM 200 CA ALA 24 -0.039 34.286 14.275 1.00 7.58 ATOM 203 CB ALA 24 0.668 34.546 12.931 1.00 7.58 ATOM 204 C ALA 24 -0.488 35.600 14.889 1.00 7.58 ATOM 205 O ALA 24 0.155 36.119 15.782 1.00 7.58 ATOM 207 N ALA 25 -1.670 36.134 14.459 1.00 7.60 ATOM 206 CA ALA 25 -2.152 37.381 15.003 1.00 7.60 ATOM 209 CB ALA 25 -3.422 37.804 14.308 1.00 7.60 ATOM 210 C ALA 25 -2.422 37.228 16.416 1.00 7.60 ATOM 211 O ALA 25 -1.965 38.031 17.227 1.00 7.60 ATOM 213 N ASN 26 -3.076 36.126 16.773 1.00 7.41 ATOM 212 CA ASN 26 -3.422 35.875 18.141 1.00 7.41 ATOM 215 CB ASN 26 -4.307 34.647 18.198 1.00 7.41 ATOM 216 C ASN 26 -2.247 35.690 18.950 1.00 7.41 ATOM 217 O ASN 26 -2.134 36.266 19.965 1.00 7.41 ATOM 218 CG ASN 26 -5.747 34.948 17.755 1.00 7.41 ATOM 219 ND2 ASN 26 -6.263 34.167 16.811 1.00 7.41 ATOM 222 OD1 ASN 26 -6.361 35.924 18.212 1.00 7.41 ATOM 224 N GLU 27 -1.320 34.983 18.473 1.00 7.60 ATOM 223 CA GLU 27 -0.106 34.746 19.206 1.00 7.60 ATOM 226 CB GLU 27 0.766 33.738 18.390 1.00 7.60 ATOM 227 C GLU 27 0.662 36.083 19.473 1.00 7.60 ATOM 228 O GLU 27 1.145 36.318 20.579 1.00 7.60 ATOM 229 CG GLU 27 2.121 33.431 18.953 1.00 7.60 ATOM 230 CD GLU 27 2.096 32.713 20.323 1.00 7.60 ATOM 231 OE1 GLU 27 0.991 32.438 20.840 1.00 7.60 ATOM 232 OE2 GLU 27 3.187 32.399 20.853 1.00 7.60 ATOM 234 N LEU 28 0.715 36.942 18.487 1.00 7.73 ATOM 233 CA LEU 28 1.377 38.193 18.604 1.00 7.73 ATOM 236 CB LEU 28 1.544 38.847 17.221 1.00 7.73 ATOM 237 C LEU 28 0.649 39.117 19.589 1.00 7.73 ATOM 238 O LEU 28 1.273 39.954 20.277 1.00 7.73 ATOM 239 CG LEU 28 2.343 40.135 17.176 1.00 7.73 ATOM 240 CD1 LEU 28 3.761 39.869 17.607 1.00 7.73 ATOM 241 CD2 LEU 28 2.310 40.731 15.768 1.00 7.73 ATOM 243 N ARG 29 -0.674 38.990 19.598 1.00 8.39 ATOM 242 CA ARG 29 -1.539 39.839 20.320 1.00 8.39 ATOM 245 CB ARG 29 -1.313 40.003 21.808 1.00 8.39 ATOM 246 C ARG 29 -1.653 41.048 19.655 1.00 8.39 ATOM 247 O ARG 29 -1.222 42.094 20.106 1.00 8.39 ATOM 248 CG ARG 29 -2.686 39.967 22.659 1.00 8.39 ATOM 249 CD ARG 29 -3.446 38.583 22.668 1.00 8.39 ATOM 250 NE ARG 29 -3.893 38.219 21.376 1.00 8.39 ATOM 252 CZ ARG 29 -5.146 38.308 20.872 1.00 8.39 ATOM 253 NH1 ARG 29 -6.193 38.712 21.588 1.00 8.39 ATOM 254 NH2 ARG 29 -5.280 37.954 19.683 1.00 8.39 ATOM 256 N VAL 30 -2.170 40.927 18.564 1.00 8.43 ATOM 255 CA VAL 30 -2.489 41.958 17.837 1.00 8.43 ATOM 258 CB VAL 30 -1.680 42.147 16.534 1.00 8.43 ATOM 259 C VAL 30 -3.820 41.748 17.548 1.00 8.43 ATOM 260 O VAL 30 -4.309 40.579 17.709 1.00 8.43 ATOM 261 CG1 VAL 30 -0.232 42.476 16.819 1.00 8.43 ATOM 262 CG2 VAL 30 -1.777 40.907 15.674 1.00 8.43 ATOM 264 N THR 31 -4.513 42.768 17.203 1.00 8.65 ATOM 263 CA THR 31 -5.876 42.616 16.840 1.00 8.65 ATOM 266 CB THR 31 -6.429 43.891 16.239 1.00 8.65 ATOM 267 C THR 31 -5.953 41.464 15.855 1.00 8.65 ATOM 268 O THR 31 -5.005 41.218 15.131 1.00 8.65 ATOM 269 CG2 THR 31 -7.979 43.824 16.116 1.00 8.65 ATOM 270 OG1 THR 31 -6.060 44.972 17.104 1.00 8.65 ATOM 272 N GLU 32 -7.032 40.727 15.848 1.00 8.98 ATOM 271 CA GLU 32 -7.092 39.529 15.019 1.00 8.98 ATOM 274 CB GLU 32 -8.105 38.492 15.562 1.00 8.98 ATOM 275 C GLU 32 -7.474 39.824 13.644 1.00 8.98 ATOM 276 O GLU 32 -8.547 39.479 13.216 1.00 8.98 ATOM 277 CG GLU 32 -7.837 37.989 16.930 1.00 8.98 ATOM 278 CD GLU 32 -8.425 38.769 18.083 1.00 8.98 ATOM 279 OE1 GLU 32 -8.258 38.287 19.273 1.00 8.98 ATOM 280 OE2 GLU 32 -9.101 39.821 17.842 1.00 8.98 ATOM 282 N ARG 33 -6.598 40.525 12.939 1.00 8.81 ATOM 281 CA ARG 33 -6.761 40.804 11.561 1.00 8.81 ATOM 284 CB ARG 33 -7.201 42.336 11.208 1.00 8.81 ATOM 285 C ARG 33 -5.426 40.486 10.926 1.00 8.81 ATOM 286 O ARG 33 -4.367 41.078 11.311 1.00 8.81 ATOM 287 CG ARG 33 -7.911 43.201 12.300 1.00 8.81 ATOM 288 CD ARG 33 -9.520 43.154 12.371 1.00 8.81 ATOM 289 NE ARG 33 -10.025 41.955 13.026 1.00 8.81 ATOM 291 CZ ARG 33 -11.254 41.747 13.500 1.00 8.81 ATOM 292 NH1 ARG 33 -12.228 42.664 13.353 1.00 8.81 ATOM 293 NH2 ARG 33 -11.487 40.612 14.176 1.00 8.81 ATOM 295 N PRO 34 -5.434 39.652 9.954 1.00 8.85 ATOM 294 CA PRO 34 -4.170 39.225 9.236 1.00 8.85 ATOM 296 CB PRO 34 -4.664 38.234 8.235 1.00 8.85 ATOM 297 C PRO 34 -3.369 40.349 8.593 1.00 8.85 ATOM 298 O PRO 34 -2.176 40.199 8.345 1.00 8.85 ATOM 299 CG PRO 34 -6.113 38.622 8.042 1.00 8.85 ATOM 300 CD PRO 34 -6.593 39.041 9.404 1.00 8.85 ATOM 302 N PHE 35 -3.962 41.442 8.417 1.00 8.44 ATOM 301 CA PHE 35 -3.306 42.569 7.852 1.00 8.44 ATOM 304 CB PHE 35 -4.193 43.755 7.739 1.00 8.44 ATOM 305 C PHE 35 -2.194 42.942 8.636 1.00 8.44 ATOM 306 O PHE 35 -1.100 43.117 8.106 1.00 8.44 ATOM 307 CG PHE 35 -3.445 44.850 7.170 1.00 8.44 ATOM 308 CD1 PHE 35 -3.037 44.800 5.898 1.00 8.44 ATOM 309 CE1 PHE 35 -2.360 45.864 5.332 1.00 8.44 ATOM 310 CZ PHE 35 -2.158 46.998 6.059 1.00 8.44 ATOM 311 CD2 PHE 35 -3.113 45.930 7.923 1.00 8.44 ATOM 312 CE2 PHE 35 -2.446 47.007 7.360 1.00 8.44 ATOM 314 N TRP 36 -2.358 43.016 9.920 1.00 8.39 ATOM 313 CA TRP 36 -1.295 43.489 10.669 1.00 8.39 ATOM 316 CB TRP 36 -1.616 43.648 12.059 1.00 8.39 ATOM 317 C TRP 36 -0.149 42.577 10.529 1.00 8.39 ATOM 318 O TRP 36 0.935 43.031 10.328 1.00 8.39 ATOM 319 CG TRP 36 -2.712 44.552 12.198 1.00 8.39 ATOM 320 CD1 TRP 36 -3.970 44.246 12.597 1.00 8.39 ATOM 321 NE1 TRP 36 -4.763 45.325 12.488 1.00 8.39 ATOM 323 CD2 TRP 36 -2.719 45.875 11.855 1.00 8.39 ATOM 324 CE2 TRP 36 -4.065 46.320 11.963 1.00 8.39 ATOM 325 CE3 TRP 36 -1.787 46.710 11.253 1.00 8.39 ATOM 326 CZ3 TRP 36 -2.207 47.864 10.720 1.00 8.39 ATOM 327 CH2 TRP 36 -3.566 48.223 10.739 1.00 8.39 ATOM 328 CZ2 TRP 36 -4.498 47.441 11.335 1.00 8.39 ATOM 330 N ILE 37 -0.365 41.272 10.522 1.00 7.80 ATOM 329 CA ILE 37 0.716 40.380 10.457 1.00 7.80 ATOM 332 CB ILE 37 0.208 38.930 10.529 1.00 7.80 ATOM 333 C ILE 37 1.440 40.628 9.169 1.00 7.80 ATOM 334 O ILE 37 2.628 40.830 9.155 1.00 7.80 ATOM 335 CG1 ILE 37 -0.448 38.697 11.868 1.00 7.80 ATOM 336 CD1 ILE 37 0.485 38.939 13.051 1.00 7.80 ATOM 337 CG2 ILE 37 1.338 37.918 10.336 1.00 7.80 ATOM 339 N SER 38 0.730 40.713 8.123 1.00 7.83 ATOM 338 CA SER 38 1.335 40.882 6.801 1.00 7.83 ATOM 341 CB SER 38 0.236 40.816 5.771 1.00 7.83 ATOM 342 C SER 38 2.074 42.254 6.693 1.00 7.83 ATOM 343 O SER 38 3.053 42.382 5.933 1.00 7.83 ATOM 344 OG SER 38 -0.439 39.530 5.832 1.00 7.83 ATOM 346 N SER 39 1.565 43.295 7.385 1.00 7.82 ATOM 345 CA SER 39 2.233 44.605 7.448 1.00 7.82 ATOM 348 CB SER 39 1.340 45.603 7.989 1.00 7.82 ATOM 349 C SER 39 3.445 44.531 8.315 1.00 7.82 ATOM 350 O SER 39 4.460 45.120 8.014 1.00 7.82 ATOM 351 OG SER 39 0.293 45.743 7.166 1.00 7.82 ATOM 353 N PHE 40 3.349 43.750 9.381 1.00 7.50 ATOM 352 CA PHE 40 4.424 43.595 10.350 1.00 7.50 ATOM 355 CB PHE 40 3.942 42.767 11.585 1.00 7.50 ATOM 356 C PHE 40 5.558 42.914 9.723 1.00 7.50 ATOM 357 O PHE 40 6.689 43.275 9.928 1.00 7.50 ATOM 358 CG PHE 40 3.446 43.582 12.783 1.00 7.50 ATOM 359 CD1 PHE 40 2.241 44.301 12.711 1.00 7.50 ATOM 360 CE1 PHE 40 1.751 44.971 13.821 1.00 7.50 ATOM 361 CZ PHE 40 2.411 44.878 15.019 1.00 7.50 ATOM 362 CD2 PHE 40 4.147 43.583 13.968 1.00 7.50 ATOM 363 CE2 PHE 40 3.657 44.252 15.079 1.00 7.50 ATOM 365 N ILE 41 5.246 41.989 8.916 1.00 6.96 ATOM 364 CA ILE 41 6.222 41.133 8.241 1.00 6.96 ATOM 367 CB ILE 41 5.801 39.612 8.257 1.00 6.96 ATOM 368 C ILE 41 6.355 41.631 6.865 1.00 6.96 ATOM 369 O ILE 41 5.350 42.011 6.269 1.00 6.96 ATOM 370 CG1 ILE 41 5.661 39.097 9.740 1.00 6.96 ATOM 371 CD1 ILE 41 6.972 39.079 10.524 1.00 6.96 ATOM 372 CG2 ILE 41 6.872 38.794 7.559 1.00 6.96 ATOM 374 N GLY 42 7.540 41.717 6.346 1.00 6.68 ATOM 373 CA GLY 42 7.733 42.339 5.008 1.00 6.68 ATOM 376 C GLY 42 8.250 43.719 5.039 1.00 6.68 ATOM 377 O GLY 42 8.209 44.446 4.017 1.00 6.68 ATOM 379 N ARG 43 8.669 44.124 6.175 1.00 6.32 ATOM 378 CA ARG 43 9.308 45.381 6.302 1.00 6.32 ATOM 381 CB ARG 43 8.319 46.425 6.811 1.00 6.32 ATOM 382 C ARG 43 10.539 45.186 7.243 1.00 6.32 ATOM 383 O ARG 43 10.388 44.682 8.384 1.00 6.32 ATOM 384 CG ARG 43 6.877 46.017 6.608 1.00 6.32 ATOM 385 CD ARG 43 5.923 47.185 6.421 1.00 6.32 ATOM 386 NE ARG 43 5.880 47.586 5.062 1.00 6.32 ATOM 388 CZ ARG 43 5.090 47.042 4.151 1.00 6.32 ATOM 389 NH1 ARG 43 4.195 46.093 4.509 1.00 6.32 ATOM 390 NH2 ARG 43 5.207 47.382 2.885 1.00 6.32 ATOM 392 N SER 44 11.761 45.534 6.756 1.00 5.57 ATOM 391 CA SER 44 13.033 45.255 7.549 1.00 5.57 ATOM 394 CB SER 44 14.307 45.654 6.727 1.00 5.57 ATOM 395 C SER 44 13.073 45.973 8.844 1.00 5.57 ATOM 396 O SER 44 13.486 45.414 9.838 1.00 5.57 ATOM 397 OG SER 44 14.460 44.824 5.581 1.00 5.57 ATOM 399 N LYS 45 12.585 47.152 8.852 1.00 4.99 ATOM 398 CA LYS 45 12.641 47.996 10.007 1.00 4.99 ATOM 401 CB LYS 45 11.782 47.374 11.162 1.00 4.99 ATOM 402 C LYS 45 14.107 48.191 10.569 1.00 4.99 ATOM 403 O LYS 45 14.871 49.056 10.096 1.00 4.99 ATOM 404 CG LYS 45 10.277 47.288 10.906 1.00 4.99 ATOM 405 CD LYS 45 9.537 46.695 12.161 1.00 4.99 ATOM 406 CE LYS 45 8.007 46.583 11.960 1.00 4.99 ATOM 407 NZ LYS 45 7.383 47.930 11.776 1.00 4.99 TER END