####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS457_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS457_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 16 - 40 4.86 9.89 LONGEST_CONTINUOUS_SEGMENT: 25 17 - 41 4.83 9.45 LCS_AVERAGE: 49.95 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 20 - 33 1.92 14.22 LCS_AVERAGE: 21.38 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.48 13.42 LCS_AVERAGE: 14.82 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 6 17 3 4 5 6 9 11 15 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT V 3 V 3 5 6 17 3 4 6 7 9 13 15 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT Q 4 Q 4 5 6 17 3 4 6 7 9 13 15 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT G 5 G 5 5 6 17 0 4 5 6 9 13 15 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT P 6 P 6 5 6 18 3 4 6 7 9 13 15 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT W 7 W 7 4 6 18 3 4 4 6 7 13 15 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT V 8 V 8 4 6 18 3 4 4 5 6 7 11 12 14 18 21 25 29 31 35 36 38 40 41 42 LCS_GDT G 9 G 9 4 9 18 3 4 4 5 7 8 9 12 13 14 16 16 21 25 28 33 36 40 41 42 LCS_GDT S 10 S 10 8 9 18 7 7 8 8 8 8 11 12 13 18 21 25 29 31 35 36 38 40 41 42 LCS_GDT S 11 S 11 8 9 18 7 7 8 8 8 8 8 9 10 12 14 20 23 29 31 34 38 40 41 42 LCS_GDT Y 12 Y 12 8 9 18 7 7 8 8 8 8 8 11 13 13 16 16 17 25 30 34 36 40 41 42 LCS_GDT V 13 V 13 8 9 18 7 7 8 8 8 8 11 12 19 20 26 27 30 33 35 36 38 40 41 42 LCS_GDT A 14 A 14 8 9 18 7 7 8 8 9 11 13 14 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT E 15 E 15 8 9 18 7 7 8 8 8 8 10 12 13 15 19 22 26 29 34 36 38 40 41 42 LCS_GDT T 16 T 16 8 9 25 7 7 8 8 8 9 12 13 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT G 17 G 17 8 9 25 3 4 8 8 8 8 10 12 16 18 26 27 30 33 35 36 38 40 41 42 LCS_GDT Q 18 Q 18 4 4 25 3 3 4 4 4 5 7 11 16 19 26 27 30 33 35 36 38 40 41 42 LCS_GDT N 19 N 19 4 4 25 3 3 4 8 9 13 16 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT W 20 W 20 10 14 25 7 10 11 11 13 14 16 17 18 20 22 24 28 30 35 36 37 40 41 42 LCS_GDT A 21 A 21 10 14 25 7 10 11 11 13 14 16 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT S 22 S 22 10 14 25 7 10 11 11 13 14 16 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT L 23 L 23 10 14 25 7 10 11 11 13 14 16 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT A 24 A 24 10 14 25 7 10 11 11 13 14 16 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT A 25 A 25 10 14 25 7 10 11 11 13 14 16 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT N 26 N 26 10 14 25 7 10 11 11 13 14 16 17 18 20 26 27 30 33 35 36 38 40 41 42 LCS_GDT E 27 E 27 10 14 25 7 10 11 11 13 14 16 17 18 20 23 26 30 33 35 36 38 40 41 42 LCS_GDT L 28 L 28 10 14 25 7 10 11 11 13 14 16 17 18 19 23 26 30 33 35 36 38 40 41 42 LCS_GDT R 29 R 29 10 14 25 4 10 11 11 13 14 16 17 18 19 23 26 28 33 35 36 38 40 41 42 LCS_GDT V 30 V 30 6 14 25 4 5 6 10 13 14 16 17 18 19 23 26 30 33 35 36 38 40 41 42 LCS_GDT T 31 T 31 6 14 25 4 5 6 10 13 14 16 17 18 19 23 26 29 33 35 36 38 40 41 42 LCS_GDT E 32 E 32 6 14 25 4 5 6 8 13 14 16 17 19 20 24 27 30 33 35 36 38 40 41 42 LCS_GDT R 33 R 33 3 14 25 3 3 6 7 12 14 16 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT P 34 P 34 3 5 25 1 3 4 6 8 13 14 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT F 35 F 35 3 8 25 4 4 4 6 11 14 16 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT W 36 W 36 6 8 25 4 4 5 8 9 11 16 17 18 18 19 24 28 33 33 36 38 39 41 42 LCS_GDT I 37 I 37 6 8 25 4 6 6 8 12 14 16 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT S 38 S 38 6 8 25 3 6 11 11 12 13 16 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT S 39 S 39 6 8 25 3 6 6 8 9 13 16 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT F 40 F 40 6 8 25 3 6 6 8 9 13 15 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT I 41 I 41 6 8 25 3 6 6 7 9 11 15 17 19 23 26 27 30 33 35 36 38 40 41 42 LCS_GDT G 42 G 42 6 8 24 3 6 6 7 9 11 13 16 19 23 26 27 29 32 35 36 38 40 41 42 LCS_GDT R 43 R 43 3 8 15 0 3 4 4 8 9 12 12 15 17 18 22 26 28 31 33 35 39 41 42 LCS_GDT S 44 S 44 3 5 15 0 3 4 4 6 8 10 12 13 13 14 14 15 15 20 28 31 33 34 36 LCS_GDT K 45 K 45 3 5 15 0 3 3 4 5 7 10 11 13 13 14 14 15 15 16 19 22 22 23 25 LCS_AVERAGE LCS_A: 28.72 ( 14.82 21.38 49.95 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 11 11 13 14 16 17 19 23 26 27 30 33 35 36 38 40 41 42 GDT PERCENT_AT 15.91 22.73 25.00 25.00 29.55 31.82 36.36 38.64 43.18 52.27 59.09 61.36 68.18 75.00 79.55 81.82 86.36 90.91 93.18 95.45 GDT RMS_LOCAL 0.20 0.48 0.73 0.73 1.62 1.73 2.29 2.59 3.07 3.63 3.92 4.02 4.68 5.04 5.12 5.23 5.51 5.79 5.90 6.08 GDT RMS_ALL_AT 13.80 13.42 13.10 13.10 13.70 13.44 15.22 14.42 7.33 7.36 7.31 7.27 7.26 7.42 7.19 7.17 7.22 7.11 7.16 7.06 # Checking swapping # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 16.067 0 0.045 0.044 17.561 0.000 0.000 - LGA V 3 V 3 15.237 0 0.591 0.623 18.239 0.000 0.000 14.738 LGA Q 4 Q 4 18.065 0 0.388 0.930 21.709 0.000 0.000 21.709 LGA G 5 G 5 19.490 0 0.445 0.445 23.375 0.000 0.000 - LGA P 6 P 6 20.732 0 0.449 0.422 20.977 0.000 0.000 20.409 LGA W 7 W 7 22.064 0 0.435 0.258 26.410 0.000 0.000 24.978 LGA V 8 V 8 19.816 0 0.180 0.183 20.819 0.000 0.000 18.663 LGA G 9 G 9 19.673 0 0.415 0.415 20.109 0.000 0.000 - LGA S 10 S 10 20.873 0 0.644 0.853 21.513 0.000 0.000 21.129 LGA S 11 S 11 23.812 0 0.032 0.666 28.084 0.000 0.000 28.084 LGA Y 12 Y 12 19.935 0 0.089 1.073 21.190 0.000 0.000 14.107 LGA V 13 V 13 15.575 0 0.017 0.051 17.069 0.000 0.000 14.429 LGA A 14 A 14 19.292 0 0.031 0.039 21.536 0.000 0.000 - LGA E 15 E 15 19.757 0 0.032 1.428 26.806 0.000 0.000 26.806 LGA T 16 T 16 14.820 0 0.180 1.165 16.366 0.000 0.000 14.338 LGA G 17 G 17 12.935 0 0.249 0.249 13.502 0.000 0.000 - LGA Q 18 Q 18 9.655 0 0.621 1.050 16.211 0.000 0.000 12.453 LGA N 19 N 19 4.780 0 0.066 0.973 8.055 10.000 5.682 7.640 LGA W 20 W 20 2.130 0 0.598 1.330 11.625 51.364 14.805 11.006 LGA A 21 A 21 0.936 0 0.047 0.057 1.539 69.545 65.818 - LGA S 22 S 22 2.706 0 0.032 0.632 3.611 30.000 30.303 1.728 LGA L 23 L 23 2.987 0 0.046 0.149 5.876 32.727 17.955 5.526 LGA A 24 A 24 1.378 0 0.023 0.035 1.568 70.000 66.182 - LGA A 25 A 25 1.231 0 0.055 0.056 2.090 69.545 63.273 - LGA N 26 N 26 1.814 0 0.072 0.105 4.478 61.818 37.727 3.759 LGA E 27 E 27 2.249 0 0.038 0.799 6.306 40.000 22.828 6.306 LGA L 28 L 28 2.808 0 0.230 0.250 5.006 35.455 22.045 4.140 LGA R 29 R 29 1.652 0 0.046 1.558 7.048 51.364 30.579 7.048 LGA V 30 V 30 2.714 0 0.086 0.141 4.030 30.000 23.117 4.030 LGA T 31 T 31 2.453 0 0.020 0.026 2.718 30.000 31.948 2.718 LGA E 32 E 32 2.937 0 0.676 0.942 5.700 21.818 11.717 5.131 LGA R 33 R 33 1.863 0 0.127 1.290 11.446 30.909 13.719 11.446 LGA P 34 P 34 5.805 0 0.170 0.190 9.166 4.091 2.338 9.166 LGA F 35 F 35 3.202 0 0.544 1.415 10.641 22.273 8.264 10.428 LGA W 36 W 36 3.356 0 0.641 0.583 11.327 20.909 5.974 10.390 LGA I 37 I 37 4.571 0 0.099 0.853 8.557 5.000 2.727 4.528 LGA S 38 S 38 8.964 0 0.159 0.676 11.320 0.000 0.000 9.405 LGA S 39 S 39 8.625 0 0.111 0.691 12.125 0.000 0.000 6.906 LGA F 40 F 40 10.230 0 0.057 1.338 14.369 0.000 1.983 3.880 LGA I 41 I 41 16.213 0 0.614 0.605 19.633 0.000 0.000 16.793 LGA G 42 G 42 20.403 0 0.544 0.544 24.034 0.000 0.000 - LGA R 43 R 43 24.603 0 0.669 1.408 26.306 0.000 0.000 24.767 LGA S 44 S 44 27.601 0 0.707 0.882 30.976 0.000 0.000 30.976 LGA K 45 K 45 29.928 0 0.016 1.013 35.451 0.000 0.000 34.722 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 6.930 6.865 8.998 15.610 10.886 3.221 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 17 2.59 42.045 37.214 0.632 LGA_LOCAL RMSD: 2.588 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.419 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 6.930 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.926289 * X + 0.068966 * Y + 0.370449 * Z + -95.420525 Y_new = 0.361540 * X + 0.114400 * Y + -0.925311 * Z + 62.293877 Z_new = -0.106194 * X + 0.991038 * Y + 0.081033 * Z + -60.321400 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.372126 0.106395 1.489212 [DEG: 21.3212 6.0960 85.3255 ] ZXZ: 0.380808 1.489674 -0.106747 [DEG: 21.8187 85.3520 -6.1162 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS457_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS457_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 17 2.59 37.214 6.93 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS457_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 20 N ALA 2 0.382 35.295 2.685 1.00 8.36 N ATOM 21 CA ALA 2 -1.009 35.442 2.267 1.00 8.36 C ATOM 22 C ALA 2 -1.805 34.128 2.264 1.00 8.36 C ATOM 23 O ALA 2 -1.240 33.038 2.148 1.00 8.36 O ATOM 24 CB ALA 2 -1.026 36.122 0.888 1.00 8.36 C ATOM 30 N VAL 3 -3.139 34.254 2.256 1.00 8.54 N ATOM 31 CA VAL 3 -4.102 33.143 2.056 1.00 8.54 C ATOM 32 C VAL 3 -4.550 33.068 0.579 1.00 8.54 C ATOM 33 O VAL 3 -4.552 32.002 -0.025 1.00 8.54 O ATOM 34 CB VAL 3 -5.338 33.331 2.955 1.00 8.54 C ATOM 35 CG1 VAL 3 -6.415 32.316 2.601 1.00 8.54 C ATOM 36 CG2 VAL 3 -4.938 33.204 4.417 1.00 8.54 C ATOM 46 N GLN 4 -4.889 34.222 -0.019 1.00 8.22 N ATOM 47 CA GLN 4 -5.399 34.415 -1.392 1.00 8.22 C ATOM 48 C GLN 4 -6.661 33.609 -1.703 1.00 8.22 C ATOM 49 O GLN 4 -6.647 32.676 -2.499 1.00 8.22 O ATOM 50 CB GLN 4 -4.311 34.053 -2.408 1.00 8.22 C ATOM 51 CG GLN 4 -3.141 35.021 -2.439 1.00 8.22 C ATOM 52 CD GLN 4 -3.505 36.348 -3.077 1.00 8.22 C ATOM 53 OE1 GLN 4 -4.632 36.541 -3.542 1.00 8.22 O ATOM 54 NE2 GLN 4 -2.550 37.272 -3.104 1.00 8.22 N ATOM 63 N GLY 5 -7.792 33.954 -1.065 1.00 7.42 N ATOM 64 CA GLY 5 -8.994 33.142 -1.184 1.00 7.42 C ATOM 65 C GLY 5 -10.112 33.795 -1.997 1.00 7.42 C ATOM 66 O GLY 5 -11.168 34.158 -1.405 1.00 7.42 O ATOM 70 N PRO 6 -10.030 33.814 -3.301 1.00 6.40 N ATOM 71 CA PRO 6 -11.077 34.297 -4.204 1.00 6.40 C ATOM 72 C PRO 6 -12.156 33.192 -4.340 1.00 6.40 C ATOM 73 O PRO 6 -12.237 32.502 -5.359 1.00 6.40 O ATOM 74 CB PRO 6 -10.328 34.546 -5.517 1.00 6.40 C ATOM 75 CG PRO 6 -9.241 33.527 -5.517 1.00 6.40 C ATOM 76 CD PRO 6 -8.794 33.456 -4.081 1.00 6.40 C ATOM 84 N TRP 7 -12.946 32.942 -3.293 1.00 6.33 N ATOM 85 CA TRP 7 -13.910 31.830 -3.208 1.00 6.33 C ATOM 86 C TRP 7 -13.368 30.393 -3.359 1.00 6.33 C ATOM 87 O TRP 7 -13.999 29.480 -2.850 1.00 6.33 O ATOM 88 CB TRP 7 -14.991 32.041 -4.270 1.00 6.33 C ATOM 89 CG TRP 7 -15.631 33.395 -4.211 1.00 6.33 C ATOM 90 CD1 TRP 7 -15.562 34.372 -5.160 1.00 6.33 C ATOM 91 CD2 TRP 7 -16.445 33.934 -3.141 1.00 6.33 C ATOM 92 NE1 TRP 7 -16.273 35.475 -4.756 1.00 6.33 N ATOM 93 CE2 TRP 7 -16.820 35.224 -3.523 1.00 6.33 C ATOM 94 CE3 TRP 7 -16.879 33.430 -1.909 1.00 6.33 C ATOM 95 CZ2 TRP 7 -17.611 36.027 -2.717 1.00 6.33 C ATOM 96 CZ3 TRP 7 -17.674 34.235 -1.101 1.00 6.33 C ATOM 97 CH2 TRP 7 -18.030 35.500 -1.495 1.00 6.33 C ATOM 108 N VAL 8 -12.224 30.173 -4.031 1.00 6.36 N ATOM 109 CA VAL 8 -11.299 28.998 -3.942 1.00 6.36 C ATOM 110 C VAL 8 -11.850 27.685 -4.533 1.00 6.36 C ATOM 111 O VAL 8 -11.353 27.197 -5.545 1.00 6.36 O ATOM 112 CB VAL 8 -10.934 28.741 -2.468 1.00 6.36 C ATOM 113 CG1 VAL 8 -10.101 27.474 -2.340 1.00 6.36 C ATOM 114 CG2 VAL 8 -10.187 29.938 -1.903 1.00 6.36 C ATOM 124 N GLY 9 -12.884 27.089 -3.934 1.00 6.69 N ATOM 125 CA GLY 9 -13.250 25.713 -4.262 1.00 6.69 C ATOM 126 C GLY 9 -13.453 24.973 -2.996 1.00 6.69 C ATOM 127 O GLY 9 -13.997 25.622 -2.111 1.00 6.69 O ATOM 131 N SER 10 -13.022 23.702 -2.937 1.00 6.94 N ATOM 132 CA SER 10 -13.140 22.876 -1.734 1.00 6.94 C ATOM 133 C SER 10 -13.220 23.690 -0.462 1.00 6.94 C ATOM 134 O SER 10 -12.425 24.608 -0.286 1.00 6.94 O ATOM 135 CB SER 10 -11.959 21.928 -1.643 1.00 6.94 C ATOM 136 OG SER 10 -11.865 21.366 -0.362 1.00 6.94 O ATOM 142 N SER 11 -14.275 23.458 0.339 1.00 7.15 N ATOM 143 CA SER 11 -14.421 24.202 1.603 1.00 7.15 C ATOM 144 C SER 11 -13.164 24.011 2.467 1.00 7.15 C ATOM 145 O SER 11 -12.593 24.962 2.990 1.00 7.15 O ATOM 146 CB SER 11 -15.649 23.734 2.357 1.00 7.15 C ATOM 147 OG SER 11 -16.822 24.079 1.671 1.00 7.15 O ATOM 153 N TYR 12 -12.677 22.768 2.504 1.00 7.50 N ATOM 154 CA TYR 12 -11.480 22.327 3.204 1.00 7.50 C ATOM 155 C TYR 12 -10.192 23.117 2.881 1.00 7.50 C ATOM 156 O TYR 12 -9.484 23.549 3.790 1.00 7.50 O ATOM 157 CB TYR 12 -11.256 20.842 2.914 1.00 7.50 C ATOM 158 CG TYR 12 -9.931 20.313 3.419 1.00 7.50 C ATOM 159 CD1 TYR 12 -9.818 19.863 4.726 1.00 7.50 C ATOM 160 CD2 TYR 12 -8.831 20.278 2.575 1.00 7.50 C ATOM 161 CE1 TYR 12 -8.608 19.381 5.188 1.00 7.50 C ATOM 162 CE2 TYR 12 -7.622 19.797 3.036 1.00 7.50 C ATOM 163 CZ TYR 12 -7.509 19.349 4.337 1.00 7.50 C ATOM 164 OH TYR 12 -6.304 18.867 4.796 1.00 7.50 O ATOM 174 N VAL 13 -9.880 23.313 1.602 1.00 7.56 N ATOM 175 CA VAL 13 -8.737 24.093 1.107 1.00 7.56 C ATOM 176 C VAL 13 -8.832 25.548 1.579 1.00 7.56 C ATOM 177 O VAL 13 -7.863 26.100 2.095 1.00 7.56 O ATOM 178 CB VAL 13 -8.683 24.056 -0.432 1.00 7.56 C ATOM 179 CG1 VAL 13 -7.641 25.034 -0.953 1.00 7.56 C ATOM 180 CG2 VAL 13 -8.381 22.643 -0.906 1.00 7.56 C ATOM 190 N ALA 14 -10.022 26.152 1.460 1.00 7.84 N ATOM 191 CA ALA 14 -10.298 27.501 1.950 1.00 7.84 C ATOM 192 C ALA 14 -10.174 27.594 3.479 1.00 7.84 C ATOM 193 O ALA 14 -9.532 28.517 3.982 1.00 7.84 O ATOM 194 CB ALA 14 -11.703 27.915 1.492 1.00 7.84 C ATOM 200 N GLU 15 -10.741 26.624 4.208 1.00 7.84 N ATOM 201 CA GLU 15 -10.650 26.582 5.669 1.00 7.84 C ATOM 202 C GLU 15 -9.197 26.420 6.148 1.00 7.84 C ATOM 203 O GLU 15 -8.777 27.082 7.094 1.00 7.84 O ATOM 204 CB GLU 15 -11.507 25.439 6.216 1.00 7.84 C ATOM 205 CG GLU 15 -13.007 25.685 6.140 1.00 7.84 C ATOM 206 CD GLU 15 -13.818 24.496 6.572 1.00 7.84 C ATOM 207 OE1 GLU 15 -13.245 23.453 6.774 1.00 7.84 O ATOM 208 OE2 GLU 15 -15.012 24.631 6.701 1.00 7.84 O ATOM 215 N THR 16 -8.394 25.622 5.438 1.00 7.55 N ATOM 216 CA THR 16 -6.961 25.416 5.711 1.00 7.55 C ATOM 217 C THR 16 -6.174 26.727 5.683 1.00 7.55 C ATOM 218 O THR 16 -5.424 27.023 6.616 1.00 7.55 O ATOM 219 CB THR 16 -6.345 24.431 4.702 1.00 7.55 C ATOM 220 OG1 THR 16 -7.002 23.162 4.804 1.00 7.55 O ATOM 221 CG2 THR 16 -4.858 24.251 4.972 1.00 7.55 C ATOM 229 N GLY 17 -6.387 27.549 4.650 1.00 7.71 N ATOM 230 CA GLY 17 -5.839 28.897 4.553 1.00 7.71 C ATOM 231 C GLY 17 -6.325 29.815 5.671 1.00 7.71 C ATOM 232 O GLY 17 -5.515 30.541 6.251 1.00 7.71 O ATOM 236 N GLN 18 -7.610 29.765 6.031 1.00 7.80 N ATOM 237 CA GLN 18 -8.158 30.563 7.131 1.00 7.80 C ATOM 238 C GLN 18 -7.548 30.165 8.493 1.00 7.80 C ATOM 239 O GLN 18 -7.203 31.025 9.319 1.00 7.80 O ATOM 240 CB GLN 18 -9.681 30.419 7.179 1.00 7.80 C ATOM 241 CG GLN 18 -10.404 31.058 6.006 1.00 7.80 C ATOM 242 CD GLN 18 -11.886 30.732 5.993 1.00 7.80 C ATOM 243 OE1 GLN 18 -12.344 29.826 6.694 1.00 7.80 O ATOM 244 NE2 GLN 18 -12.647 31.472 5.193 1.00 7.80 N ATOM 253 N ASN 19 -7.354 28.858 8.690 1.00 7.61 N ATOM 254 CA ASN 19 -6.732 28.256 9.866 1.00 7.61 C ATOM 255 C ASN 19 -5.274 28.713 10.030 1.00 7.61 C ATOM 256 O ASN 19 -4.856 29.061 11.136 1.00 7.61 O ATOM 257 CB ASN 19 -6.813 26.743 9.789 1.00 7.61 C ATOM 258 CG ASN 19 -8.205 26.226 10.024 1.00 7.61 C ATOM 259 OD1 ASN 19 -9.055 26.928 10.584 1.00 7.61 O ATOM 260 ND2 ASN 19 -8.455 25.011 9.608 1.00 7.61 N ATOM 267 N TRP 20 -4.516 28.776 8.928 1.00 7.20 N ATOM 268 CA TRP 20 -3.163 29.348 8.885 1.00 7.20 C ATOM 269 C TRP 20 -3.123 30.821 9.301 1.00 7.20 C ATOM 270 O TRP 20 -2.308 31.199 10.145 1.00 7.20 O ATOM 271 CB TRP 20 -2.582 29.209 7.477 1.00 7.20 C ATOM 272 CG TRP 20 -1.264 29.899 7.303 1.00 7.20 C ATOM 273 CD1 TRP 20 -0.038 29.419 7.657 1.00 7.20 C ATOM 274 CD2 TRP 20 -1.031 31.207 6.726 1.00 7.20 C ATOM 275 NE1 TRP 20 0.937 30.333 7.343 1.00 7.20 N ATOM 276 CE2 TRP 20 0.348 31.433 6.772 1.00 7.20 C ATOM 277 CE3 TRP 20 -1.868 32.189 6.183 1.00 7.20 C ATOM 278 CZ2 TRP 20 0.915 32.604 6.295 1.00 7.20 C ATOM 279 CZ3 TRP 20 -1.300 33.363 5.704 1.00 7.20 C ATOM 280 CH2 TRP 20 0.056 33.564 5.759 1.00 7.20 C ATOM 291 N ALA 21 -4.028 31.648 8.769 1.00 7.27 N ATOM 292 CA ALA 21 -4.150 33.032 9.215 1.00 7.27 C ATOM 293 C ALA 21 -4.506 33.131 10.710 1.00 7.27 C ATOM 294 O ALA 21 -3.944 33.967 11.422 1.00 7.27 O ATOM 295 CB ALA 21 -5.172 33.737 8.315 1.00 7.27 C ATOM 301 N SER 22 -5.405 32.265 11.201 1.00 7.75 N ATOM 302 CA SER 22 -5.779 32.231 12.626 1.00 7.75 C ATOM 303 C SER 22 -4.587 31.906 13.534 1.00 7.75 C ATOM 304 O SER 22 -4.370 32.576 14.548 1.00 7.75 O ATOM 305 CB SER 22 -6.877 31.208 12.848 1.00 7.75 C ATOM 306 OG SER 22 -8.055 31.583 12.186 1.00 7.75 O ATOM 312 N LEU 23 -3.759 30.942 13.120 1.00 7.89 N ATOM 313 CA LEU 23 -2.505 30.613 13.791 1.00 7.89 C ATOM 314 C LEU 23 -1.509 31.779 13.766 1.00 7.89 C ATOM 315 O LEU 23 -0.882 32.043 14.782 1.00 7.89 O ATOM 316 CB LEU 23 -1.871 29.381 13.132 1.00 7.89 C ATOM 317 CG LEU 23 -2.608 28.054 13.353 1.00 7.89 C ATOM 318 CD1 LEU 23 -1.979 26.972 12.488 1.00 7.89 C ATOM 319 CD2 LEU 23 -2.549 27.679 14.827 1.00 7.89 C ATOM 331 N ALA 24 -1.404 32.524 12.660 1.00 7.55 N ATOM 332 CA ALA 24 -0.600 33.750 12.614 1.00 7.55 C ATOM 333 C ALA 24 -1.083 34.830 13.595 1.00 7.55 C ATOM 334 O ALA 24 -0.277 35.456 14.277 1.00 7.55 O ATOM 335 CB ALA 24 -0.577 34.262 11.167 1.00 7.55 C ATOM 341 N ALA 25 -2.396 35.033 13.711 1.00 7.52 N ATOM 342 CA ALA 25 -2.969 35.984 14.661 1.00 7.52 C ATOM 343 C ALA 25 -2.579 35.697 16.115 1.00 7.52 C ATOM 344 O ALA 25 -2.349 36.631 16.891 1.00 7.52 O ATOM 345 CB ALA 25 -4.476 35.950 14.468 1.00 7.52 C ATOM 351 N ASN 26 -2.466 34.419 16.489 1.00 8.30 N ATOM 352 CA ASN 26 -2.018 34.112 17.845 1.00 8.30 C ATOM 353 C ASN 26 -0.590 34.604 18.144 1.00 8.30 C ATOM 354 O ASN 26 -0.306 34.864 19.309 1.00 8.30 O ATOM 355 CB ASN 26 -2.121 32.618 18.091 1.00 8.30 C ATOM 356 CG ASN 26 -3.544 32.153 18.232 1.00 8.30 C ATOM 357 OD1 ASN 26 -4.453 32.958 18.468 1.00 8.30 O ATOM 358 ND2 ASN 26 -3.755 30.869 18.094 1.00 8.30 N ATOM 365 N GLU 27 0.249 34.888 17.142 1.00 8.48 N ATOM 366 CA GLU 27 1.600 35.458 17.325 1.00 8.48 C ATOM 367 C GLU 27 1.689 36.962 17.003 1.00 8.48 C ATOM 368 O GLU 27 2.472 37.678 17.632 1.00 8.48 O ATOM 369 CB GLU 27 2.603 34.696 16.456 1.00 8.48 C ATOM 370 CG GLU 27 2.762 33.227 16.819 1.00 8.48 C ATOM 371 CD GLU 27 3.798 32.526 15.984 1.00 8.48 C ATOM 372 OE1 GLU 27 4.304 33.131 15.069 1.00 8.48 O ATOM 373 OE2 GLU 27 4.084 31.386 16.262 1.00 8.48 O ATOM 380 N LEU 28 0.847 37.473 16.098 1.00 8.04 N ATOM 381 CA LEU 28 0.796 38.899 15.746 1.00 8.04 C ATOM 382 C LEU 28 0.318 39.786 16.910 1.00 8.04 C ATOM 383 O LEU 28 0.861 40.877 17.073 1.00 8.04 O ATOM 384 CB LEU 28 -0.130 39.101 14.540 1.00 8.04 C ATOM 385 CG LEU 28 0.360 38.499 13.217 1.00 8.04 C ATOM 386 CD1 LEU 28 -0.769 38.530 12.195 1.00 8.04 C ATOM 387 CD2 LEU 28 1.568 39.279 12.720 1.00 8.04 C ATOM 399 N ARG 29 -0.625 39.319 17.751 1.00 8.59 N ATOM 400 CA ARG 29 -1.089 39.993 18.993 1.00 8.59 C ATOM 401 C ARG 29 -1.550 41.452 18.871 1.00 8.59 C ATOM 402 O ARG 29 -1.282 42.265 19.754 1.00 8.59 O ATOM 403 CB ARG 29 0.022 39.951 20.031 1.00 8.59 C ATOM 404 CG ARG 29 0.489 38.556 20.412 1.00 8.59 C ATOM 405 CD ARG 29 -0.582 37.789 21.101 1.00 8.59 C ATOM 406 NE ARG 29 -0.138 36.454 21.473 1.00 8.59 N ATOM 407 CZ ARG 29 0.433 36.139 22.653 1.00 8.59 C ATOM 408 NH1 ARG 29 0.624 37.071 23.560 1.00 8.59 N ATOM 409 NH2 ARG 29 0.802 34.893 22.896 1.00 8.59 N ATOM 423 N VAL 30 -2.405 41.749 17.901 1.00 9.14 N ATOM 424 CA VAL 30 -2.982 43.093 17.802 1.00 9.14 C ATOM 425 C VAL 30 -4.452 42.931 18.229 1.00 9.14 C ATOM 426 O VAL 30 -5.134 42.030 17.744 1.00 9.14 O ATOM 427 CB VAL 30 -2.883 43.656 16.372 1.00 9.14 C ATOM 428 CG1 VAL 30 -3.513 45.039 16.300 1.00 9.14 C ATOM 429 CG2 VAL 30 -1.426 43.704 15.935 1.00 9.14 C ATOM 439 N THR 31 -4.883 43.624 19.286 1.00 9.37 N ATOM 440 CA THR 31 -6.244 43.459 19.851 1.00 9.37 C ATOM 441 C THR 31 -7.309 44.229 19.075 1.00 9.37 C ATOM 442 O THR 31 -8.498 43.955 19.232 1.00 9.37 O ATOM 443 CB THR 31 -6.284 43.905 21.325 1.00 9.37 C ATOM 444 OG1 THR 31 -5.939 45.293 21.417 1.00 9.37 O ATOM 445 CG2 THR 31 -5.308 43.087 22.156 1.00 9.37 C ATOM 453 N GLU 32 -6.890 45.148 18.205 1.00 9.73 N ATOM 454 CA GLU 32 -7.720 46.000 17.341 1.00 9.73 C ATOM 455 C GLU 32 -8.131 45.380 15.995 1.00 9.73 C ATOM 456 O GLU 32 -9.196 45.731 15.488 1.00 9.73 O ATOM 457 CB GLU 32 -6.980 47.313 17.074 1.00 9.73 C ATOM 458 CG GLU 32 -6.748 48.167 18.311 1.00 9.73 C ATOM 459 CD GLU 32 -5.996 49.434 18.015 1.00 9.73 C ATOM 460 OE1 GLU 32 -5.601 49.619 16.888 1.00 9.73 O ATOM 461 OE2 GLU 32 -5.815 50.219 18.915 1.00 9.73 O ATOM 468 N ARG 33 -7.292 44.476 15.456 1.00 9.56 N ATOM 469 CA ARG 33 -7.322 43.770 14.157 1.00 9.56 C ATOM 470 C ARG 33 -5.929 43.794 13.508 1.00 9.56 C ATOM 471 O ARG 33 -5.560 44.832 12.953 1.00 9.56 O ATOM 472 CB ARG 33 -8.334 44.405 13.215 1.00 9.56 C ATOM 473 CG ARG 33 -7.963 45.795 12.723 1.00 9.56 C ATOM 474 CD ARG 33 -9.111 46.468 12.062 1.00 9.56 C ATOM 475 NE ARG 33 -10.142 46.843 13.017 1.00 9.56 N ATOM 476 CZ ARG 33 -11.290 47.471 12.696 1.00 9.56 C ATOM 477 NH1 ARG 33 -11.538 47.787 11.444 1.00 9.56 N ATOM 478 NH2 ARG 33 -12.167 47.770 13.639 1.00 9.56 N ATOM 492 N PRO 34 -5.154 42.687 13.551 1.00 9.08 N ATOM 493 CA PRO 34 -3.820 42.599 12.957 1.00 9.08 C ATOM 494 C PRO 34 -3.666 43.021 11.477 1.00 9.08 C ATOM 495 O PRO 34 -4.394 42.640 10.532 1.00 9.08 O ATOM 496 CB PRO 34 -3.523 41.105 13.126 1.00 9.08 C ATOM 497 CG PRO 34 -4.261 40.724 14.364 1.00 9.08 C ATOM 498 CD PRO 34 -5.557 41.486 14.278 1.00 9.08 C ATOM 506 N PHE 35 -2.573 43.757 11.270 1.00 8.97 N ATOM 507 CA PHE 35 -2.187 44.245 9.958 1.00 8.97 C ATOM 508 C PHE 35 -2.137 43.126 8.912 1.00 8.97 C ATOM 509 O PHE 35 -2.852 43.216 7.922 1.00 8.97 O ATOM 510 CB PHE 35 -0.825 44.935 10.041 1.00 8.97 C ATOM 511 CG PHE 35 -0.218 45.240 8.700 1.00 8.97 C ATOM 512 CD1 PHE 35 -0.645 46.335 7.964 1.00 8.97 C ATOM 513 CD2 PHE 35 0.780 44.434 8.174 1.00 8.97 C ATOM 514 CE1 PHE 35 -0.088 46.617 6.730 1.00 8.97 C ATOM 515 CE2 PHE 35 1.340 44.714 6.942 1.00 8.97 C ATOM 516 CZ PHE 35 0.904 45.807 6.220 1.00 8.97 C ATOM 526 N TRP 36 -1.383 42.050 9.162 1.00 9.96 N ATOM 527 CA TRP 36 -1.162 40.958 8.209 1.00 9.96 C ATOM 528 C TRP 36 -2.431 40.126 7.961 1.00 9.96 C ATOM 529 O TRP 36 -2.654 39.725 6.811 1.00 9.96 O ATOM 530 CB TRP 36 -0.046 40.042 8.715 1.00 9.96 C ATOM 531 CG TRP 36 1.330 40.562 8.429 1.00 9.96 C ATOM 532 CD1 TRP 36 2.259 40.958 9.345 1.00 9.96 C ATOM 533 CD2 TRP 36 1.944 40.746 7.130 1.00 9.96 C ATOM 534 NE1 TRP 36 3.402 41.374 8.709 1.00 9.96 N ATOM 535 CE2 TRP 36 3.228 41.249 7.354 1.00 9.96 C ATOM 536 CE3 TRP 36 1.513 40.525 5.817 1.00 9.96 C ATOM 537 CZ2 TRP 36 4.092 41.542 6.312 1.00 9.96 C ATOM 538 CZ3 TRP 36 2.380 40.818 4.771 1.00 9.96 C ATOM 539 CH2 TRP 36 3.637 41.312 5.013 1.00 9.96 C ATOM 550 N ILE 37 -3.298 39.958 8.985 1.00 10.56 N ATOM 551 CA ILE 37 -4.511 39.131 8.847 1.00 10.56 C ATOM 552 C ILE 37 -5.486 39.773 7.879 1.00 10.56 C ATOM 553 O ILE 37 -6.053 39.079 7.039 1.00 10.56 O ATOM 554 CB ILE 37 -5.207 38.921 10.204 1.00 10.56 C ATOM 555 CG1 ILE 37 -4.290 38.157 11.162 1.00 10.56 C ATOM 556 CG2 ILE 37 -6.523 38.180 10.018 1.00 10.56 C ATOM 557 CD1 ILE 37 -3.890 36.787 10.663 1.00 10.56 C ATOM 569 N SER 38 -5.638 41.097 7.956 1.00 11.35 N ATOM 570 CA SER 38 -6.454 41.777 6.934 1.00 11.35 C ATOM 571 C SER 38 -5.847 41.640 5.509 1.00 11.35 C ATOM 572 O SER 38 -6.510 41.238 4.541 1.00 11.35 O ATOM 573 CB SER 38 -6.600 43.243 7.290 1.00 11.35 C ATOM 574 OG SER 38 -7.406 43.406 8.425 1.00 11.35 O ATOM 580 N SER 39 -4.535 41.876 5.421 1.00 12.43 N ATOM 581 CA SER 39 -3.755 41.778 4.189 1.00 12.43 C ATOM 582 C SER 39 -3.695 40.354 3.629 1.00 12.43 C ATOM 583 O SER 39 -3.635 40.187 2.411 1.00 12.43 O ATOM 584 CB SER 39 -2.346 42.281 4.438 1.00 12.43 C ATOM 585 OG SER 39 -2.350 43.647 4.747 1.00 12.43 O ATOM 591 N PHE 40 -3.809 39.325 4.484 1.00 14.13 N ATOM 592 CA PHE 40 -3.806 37.930 4.029 1.00 14.13 C ATOM 593 C PHE 40 -4.951 37.528 3.057 1.00 14.13 C ATOM 594 O PHE 40 -4.773 36.554 2.320 1.00 14.13 O ATOM 595 CB PHE 40 -3.854 37.013 5.253 1.00 14.13 C ATOM 596 CG PHE 40 -2.536 36.878 5.961 1.00 14.13 C ATOM 597 CD1 PHE 40 -1.381 37.413 5.413 1.00 14.13 C ATOM 598 CD2 PHE 40 -2.450 36.214 7.175 1.00 14.13 C ATOM 599 CE1 PHE 40 -0.167 37.289 6.063 1.00 14.13 C ATOM 600 CE2 PHE 40 -1.238 36.090 7.829 1.00 14.13 C ATOM 601 CZ PHE 40 -0.096 36.628 7.270 1.00 14.13 C ATOM 611 N ILE 41 -6.118 38.203 3.007 1.00 12.28 N ATOM 612 CA ILE 41 -7.216 37.752 2.098 1.00 12.28 C ATOM 613 C ILE 41 -6.845 37.754 0.594 1.00 12.28 C ATOM 614 O ILE 41 -7.192 36.812 -0.134 1.00 12.28 O ATOM 615 CB ILE 41 -8.463 38.635 2.292 1.00 12.28 C ATOM 616 CG1 ILE 41 -9.093 38.374 3.663 1.00 12.28 C ATOM 617 CG2 ILE 41 -9.472 38.381 1.183 1.00 12.28 C ATOM 618 CD1 ILE 41 -10.148 39.384 4.051 1.00 12.28 C ATOM 630 N GLY 42 -6.123 38.770 0.110 1.00 13.13 N ATOM 631 CA GLY 42 -5.636 38.882 -1.279 1.00 13.13 C ATOM 632 C GLY 42 -6.742 39.049 -2.319 1.00 13.13 C ATOM 633 O GLY 42 -7.441 40.051 -2.262 1.00 13.13 O ATOM 637 N ARG 43 -6.900 38.113 -3.280 1.00 12.12 N ATOM 638 CA ARG 43 -7.914 38.170 -4.380 1.00 12.12 C ATOM 639 C ARG 43 -7.711 39.215 -5.510 1.00 12.12 C ATOM 640 O ARG 43 -8.576 39.396 -6.365 1.00 12.12 O ATOM 641 CB ARG 43 -9.286 38.421 -3.770 1.00 12.12 C ATOM 642 CG ARG 43 -9.683 37.449 -2.669 1.00 12.12 C ATOM 643 CD ARG 43 -11.054 37.722 -2.167 1.00 12.12 C ATOM 644 NE ARG 43 -11.390 36.881 -1.029 1.00 12.12 N ATOM 645 CZ ARG 43 -12.480 37.044 -0.253 1.00 12.12 C ATOM 646 NH1 ARG 43 -13.326 38.018 -0.505 1.00 12.12 N ATOM 647 NH2 ARG 43 -12.697 36.225 0.762 1.00 12.12 N ATOM 661 N SER 44 -6.540 39.858 -5.565 1.00 11.16 N ATOM 662 CA SER 44 -6.053 40.832 -6.569 1.00 11.16 C ATOM 663 C SER 44 -6.689 42.233 -6.493 1.00 11.16 C ATOM 664 O SER 44 -6.165 43.160 -7.110 1.00 11.16 O ATOM 665 CB SER 44 -6.282 40.268 -7.957 1.00 11.16 C ATOM 666 OG SER 44 -7.600 40.494 -8.379 1.00 11.16 O ATOM 672 N LYS 45 -7.800 42.388 -5.762 1.00 8.71 N ATOM 673 CA LYS 45 -8.530 43.640 -5.473 1.00 8.71 C ATOM 674 C LYS 45 -9.021 43.603 -4.029 1.00 8.71 C ATOM 675 O LYS 45 -9.322 42.519 -3.525 1.00 8.71 O ATOM 676 CB LYS 45 -9.706 43.834 -6.432 1.00 8.71 C ATOM 677 CG LYS 45 -9.304 44.025 -7.889 1.00 8.71 C ATOM 678 CD LYS 45 -10.512 44.343 -8.757 1.00 8.71 C ATOM 679 CE LYS 45 -11.315 43.089 -9.070 1.00 8.71 C ATOM 680 NZ LYS 45 -10.570 42.158 -9.960 1.00 8.71 N TER END