####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS414_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS414_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 8 - 26 4.95 12.43 LONGEST_CONTINUOUS_SEGMENT: 19 9 - 27 4.91 12.61 LCS_AVERAGE: 39.46 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.79 14.90 LCS_AVERAGE: 17.41 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 0.94 15.66 LCS_AVERAGE: 12.45 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 6 9 3 5 5 5 5 6 6 6 6 6 9 10 10 11 11 13 15 16 17 17 LCS_GDT V 3 V 3 5 6 9 3 5 5 5 5 6 6 6 6 10 10 11 12 12 12 13 15 16 17 17 LCS_GDT Q 4 Q 4 5 6 13 3 5 5 5 5 6 6 7 9 10 10 11 13 16 17 21 23 23 26 27 LCS_GDT G 5 G 5 5 6 13 3 5 5 5 5 6 8 8 9 13 13 17 17 19 21 23 26 26 28 29 LCS_GDT P 6 P 6 5 6 13 3 5 5 5 5 6 10 12 13 14 16 17 19 21 21 25 26 27 28 29 LCS_GDT W 7 W 7 4 6 13 3 4 4 5 9 9 12 13 14 15 17 17 19 21 23 25 28 28 30 33 LCS_GDT V 8 V 8 4 5 19 3 4 7 9 11 12 14 14 14 16 17 18 20 21 23 26 28 29 31 33 LCS_GDT G 9 G 9 4 5 19 4 6 10 11 11 12 14 14 15 17 18 21 21 23 26 27 28 31 32 33 LCS_GDT S 10 S 10 3 5 19 0 3 5 8 10 12 14 14 15 17 18 21 21 23 26 27 28 31 32 33 LCS_GDT S 11 S 11 4 5 19 4 4 5 6 8 12 12 14 15 17 18 21 21 23 26 27 28 31 32 33 LCS_GDT Y 12 Y 12 4 5 19 4 4 4 5 5 5 6 8 12 16 18 21 21 23 26 27 28 31 32 33 LCS_GDT V 13 V 13 4 5 19 4 4 4 5 5 5 7 13 15 17 18 21 21 23 26 27 28 31 32 33 LCS_GDT A 14 A 14 5 6 19 4 5 5 6 8 10 10 13 14 17 18 21 21 23 26 27 28 31 32 33 LCS_GDT E 15 E 15 5 6 19 3 5 5 5 5 6 8 8 11 12 15 16 19 23 25 27 28 31 32 33 LCS_GDT T 16 T 16 5 6 19 3 5 5 5 5 6 8 8 9 12 14 16 18 21 23 25 28 31 32 33 LCS_GDT G 17 G 17 5 6 19 3 5 5 5 5 6 9 10 12 14 15 17 21 23 26 27 28 31 32 33 LCS_GDT Q 18 Q 18 5 6 19 3 5 5 5 5 6 7 9 11 14 16 21 21 23 26 27 28 31 32 33 LCS_GDT N 19 N 19 4 11 19 3 4 4 8 10 12 14 14 15 17 18 21 21 23 26 27 28 31 32 33 LCS_GDT W 20 W 20 9 11 19 6 8 10 11 11 12 14 14 15 17 18 21 21 23 26 27 28 31 32 33 LCS_GDT A 21 A 21 9 11 19 6 8 10 11 11 12 14 14 15 17 18 21 21 23 26 27 28 31 32 33 LCS_GDT S 22 S 22 9 11 19 5 8 10 11 11 12 14 14 15 17 18 19 20 23 24 26 28 30 32 33 LCS_GDT L 23 L 23 9 11 19 6 8 10 11 11 12 14 14 15 17 18 21 21 23 26 27 28 31 32 33 LCS_GDT A 24 A 24 9 11 19 6 8 10 11 11 12 14 14 15 17 18 21 21 23 26 27 28 31 32 33 LCS_GDT A 25 A 25 9 11 19 6 8 10 11 11 12 14 14 15 17 18 21 21 23 26 27 28 31 32 33 LCS_GDT N 26 N 26 9 11 19 6 8 10 11 11 12 14 14 15 17 18 21 21 23 26 27 28 31 32 33 LCS_GDT E 27 E 27 9 11 19 4 8 10 11 11 12 14 14 15 17 18 21 21 23 26 27 28 31 32 33 LCS_GDT L 28 L 28 9 11 18 4 6 10 11 11 12 14 14 15 17 18 21 21 22 23 25 27 31 32 33 LCS_GDT R 29 R 29 7 11 18 4 5 10 11 11 12 14 14 15 17 18 21 21 22 23 25 27 28 31 32 LCS_GDT V 30 V 30 5 9 18 4 5 5 6 7 10 10 13 14 17 18 21 21 23 26 27 28 31 32 33 LCS_GDT T 31 T 31 5 9 18 4 5 5 6 7 8 10 13 14 16 18 21 21 23 26 27 28 31 32 33 LCS_GDT E 32 E 32 5 9 18 3 4 5 6 7 8 10 13 14 14 16 19 21 23 26 27 28 31 32 33 LCS_GDT R 33 R 33 3 9 18 3 3 4 5 6 8 10 13 14 14 15 16 17 22 26 27 28 31 32 33 LCS_GDT P 34 P 34 3 9 18 3 5 5 6 7 8 10 13 14 14 15 16 17 19 22 24 27 31 32 33 LCS_GDT F 35 F 35 3 9 18 3 3 3 4 6 8 10 13 14 14 15 16 17 19 22 24 27 31 31 33 LCS_GDT W 36 W 36 6 9 18 3 4 6 7 7 8 10 13 14 14 15 17 20 21 26 27 28 31 32 33 LCS_GDT I 37 I 37 6 7 18 3 5 6 7 7 8 10 13 14 14 15 16 20 21 26 27 28 31 32 33 LCS_GDT S 38 S 38 6 7 18 3 5 6 7 7 8 9 13 14 14 15 16 20 23 26 27 28 31 32 33 LCS_GDT S 39 S 39 6 7 18 3 5 6 7 7 8 10 13 14 14 16 19 21 23 26 27 28 31 32 33 LCS_GDT F 40 F 40 6 7 18 3 5 6 7 7 8 10 13 14 14 18 21 21 23 26 27 28 31 32 33 LCS_GDT I 41 I 41 6 7 18 3 5 6 7 7 8 9 13 14 14 18 21 21 23 26 27 28 31 32 33 LCS_GDT G 42 G 42 3 7 18 3 3 4 7 7 7 8 9 12 12 15 15 17 22 24 26 28 30 32 33 LCS_GDT R 43 R 43 3 5 16 3 3 3 4 5 6 8 9 12 12 12 13 13 14 15 17 21 23 27 30 LCS_GDT S 44 S 44 3 5 14 3 3 3 4 4 6 8 9 12 12 12 13 13 13 14 14 18 18 18 18 LCS_GDT K 45 K 45 3 5 14 0 3 3 4 5 6 8 9 12 12 12 13 13 13 14 16 18 18 18 18 LCS_AVERAGE LCS_A: 23.11 ( 12.45 17.41 39.46 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 10 11 11 12 14 14 15 17 18 21 21 23 26 27 28 31 32 33 GDT PERCENT_AT 13.64 18.18 22.73 25.00 25.00 27.27 31.82 31.82 34.09 38.64 40.91 47.73 47.73 52.27 59.09 61.36 63.64 70.45 72.73 75.00 GDT RMS_LOCAL 0.26 0.53 1.00 1.10 1.10 1.39 2.02 2.02 2.60 3.23 3.43 4.34 4.34 4.96 5.67 5.77 5.89 6.38 6.50 6.65 GDT RMS_ALL_AT 16.51 16.36 15.48 15.31 15.31 15.32 14.80 14.80 14.37 13.62 13.59 13.13 13.13 12.69 13.00 12.92 12.88 13.00 12.65 12.71 # Checking swapping # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 30.101 0 0.040 0.044 32.015 0.000 0.000 - LGA V 3 V 3 23.455 0 0.063 0.160 26.023 0.000 0.000 19.747 LGA Q 4 Q 4 19.934 0 0.124 0.385 26.663 0.000 0.000 23.165 LGA G 5 G 5 14.147 0 0.069 0.069 16.374 0.000 0.000 - LGA P 6 P 6 10.039 0 0.697 0.573 13.064 0.000 0.000 10.934 LGA W 7 W 7 6.903 0 0.366 1.181 8.699 0.000 5.974 4.389 LGA V 8 V 8 2.338 0 0.038 1.188 4.180 35.455 32.208 2.822 LGA G 9 G 9 1.829 0 0.502 0.502 1.829 70.000 70.000 - LGA S 10 S 10 3.118 0 0.607 0.793 6.519 26.364 18.485 6.519 LGA S 11 S 11 6.814 0 0.592 0.579 9.351 0.000 0.000 9.351 LGA Y 12 Y 12 9.236 0 0.075 1.159 16.670 0.000 0.000 16.670 LGA V 13 V 13 7.131 0 0.080 0.998 8.686 0.000 0.000 5.574 LGA A 14 A 14 9.016 0 0.621 0.605 10.362 0.000 0.000 - LGA E 15 E 15 14.162 0 0.194 1.294 19.556 0.000 0.000 19.089 LGA T 16 T 16 12.468 0 0.670 1.346 13.682 0.000 0.000 11.986 LGA G 17 G 17 9.950 0 0.193 0.193 10.303 0.000 0.000 - LGA Q 18 Q 18 9.552 0 0.681 0.740 17.490 0.000 0.000 14.063 LGA N 19 N 19 3.926 0 0.088 1.072 5.857 25.000 18.409 3.142 LGA W 20 W 20 3.038 0 0.649 1.322 13.345 36.364 10.390 13.345 LGA A 21 A 21 0.791 0 0.070 0.067 1.905 74.091 75.636 - LGA S 22 S 22 2.297 0 0.152 0.597 3.262 41.818 35.455 2.671 LGA L 23 L 23 1.416 0 0.066 0.615 4.308 73.636 47.955 3.018 LGA A 24 A 24 1.195 0 0.051 0.082 1.345 69.545 68.727 - LGA A 25 A 25 1.092 0 0.233 0.222 2.477 62.727 63.273 - LGA N 26 N 26 0.494 0 0.078 0.757 2.887 90.909 68.864 2.887 LGA E 27 E 27 0.929 0 0.127 0.744 2.839 77.727 56.970 2.576 LGA L 28 L 28 0.993 0 0.072 0.271 1.716 73.636 67.727 1.716 LGA R 29 R 29 1.078 0 0.182 1.615 10.861 46.364 20.496 10.579 LGA V 30 V 30 7.630 0 0.132 0.211 12.717 0.000 0.000 12.717 LGA T 31 T 31 10.630 0 0.688 0.550 13.907 0.000 0.000 8.133 LGA E 32 E 32 17.730 0 0.493 1.058 19.712 0.000 0.000 15.911 LGA R 33 R 33 22.045 0 0.318 1.537 24.451 0.000 0.000 14.880 LGA P 34 P 34 27.094 0 0.677 0.608 29.974 0.000 0.000 29.974 LGA F 35 F 35 26.644 0 0.576 0.663 26.874 0.000 0.000 24.313 LGA W 36 W 36 24.474 0 0.671 1.223 29.413 0.000 0.000 29.326 LGA I 37 I 37 21.188 0 0.107 0.818 23.378 0.000 0.000 20.951 LGA S 38 S 38 23.721 0 0.043 0.638 26.875 0.000 0.000 26.875 LGA S 39 S 39 21.329 0 0.216 0.716 23.056 0.000 0.000 23.056 LGA F 40 F 40 15.067 0 0.066 0.859 17.472 0.000 0.000 11.611 LGA I 41 I 41 17.288 0 0.138 1.233 20.764 0.000 0.000 20.764 LGA G 42 G 42 18.308 0 0.710 0.710 18.308 0.000 0.000 - LGA R 43 R 43 20.055 0 0.134 0.587 24.706 0.000 0.000 24.706 LGA S 44 S 44 20.598 0 0.673 0.597 23.157 0.000 0.000 19.394 LGA K 45 K 45 19.955 0 0.014 0.719 19.955 0.000 0.000 17.494 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.188 10.966 11.743 18.264 15.013 5.766 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 14 2.02 34.091 29.661 0.661 LGA_LOCAL RMSD: 2.017 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.799 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.188 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.421921 * X + -0.158809 * Y + 0.892616 * Z + -28.816830 Y_new = 0.794616 * X + -0.409278 * Y + -0.448415 * Z + 38.861286 Z_new = 0.436541 * X + 0.898483 * Y + -0.046490 * Z + -18.762516 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.082678 -0.451750 1.622494 [DEG: 62.0329 -25.8834 92.9620 ] ZXZ: 1.105262 1.617303 0.452275 [DEG: 63.3268 92.6647 25.9135 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS414_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS414_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 14 2.02 29.661 11.19 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS414_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 20 N ALA 2 -15.199 37.713 -3.724 1.00 11.66 N ATOM 21 CA ALA 2 -14.188 38.755 -3.574 1.00 11.66 C ATOM 22 C ALA 2 -12.711 38.147 -3.625 1.00 11.66 C ATOM 23 O ALA 2 -12.545 36.982 -3.299 1.00 11.66 O ATOM 24 CB ALA 2 -14.449 39.563 -2.321 1.00 11.66 C ATOM 30 N VAL 3 -11.763 39.024 -4.031 1.00 10.21 N ATOM 31 CA VAL 3 -10.314 38.727 -3.787 1.00 10.21 C ATOM 32 C VAL 3 -9.821 38.786 -2.359 1.00 10.21 C ATOM 33 O VAL 3 -10.316 39.612 -1.586 1.00 10.21 O ATOM 34 CB VAL 3 -9.443 39.632 -4.695 1.00 10.21 C ATOM 35 CG1 VAL 3 -7.983 39.559 -4.545 1.00 10.21 C ATOM 36 CG2 VAL 3 -9.812 39.243 -6.165 1.00 10.21 C ATOM 46 N GLN 4 -8.755 38.010 -2.085 1.00 9.11 N ATOM 47 CA GLN 4 -8.159 37.924 -0.672 1.00 9.11 C ATOM 48 C GLN 4 -6.877 38.761 -0.536 1.00 9.11 C ATOM 49 O GLN 4 -6.407 39.366 -1.506 1.00 9.11 O ATOM 50 CB GLN 4 -7.938 36.479 -0.269 1.00 9.11 C ATOM 51 CG GLN 4 -9.186 35.615 -0.337 1.00 9.11 C ATOM 52 CD GLN 4 -9.049 34.076 0.062 1.00 9.11 C ATOM 53 NE2 GLN 4 -10.097 33.360 0.070 1.00 9.11 N ATOM 54 OE1 GLN 4 -7.977 33.595 0.436 1.00 9.11 O ATOM 63 N GLY 5 -6.226 38.748 0.655 1.00 8.25 N ATOM 64 CA GLY 5 -4.805 39.138 0.903 1.00 8.25 C ATOM 65 C GLY 5 -3.742 38.123 0.457 1.00 8.25 C ATOM 66 O GLY 5 -4.130 36.992 0.228 1.00 8.25 O ATOM 70 N PRO 6 -2.457 38.518 0.413 1.00 8.11 N ATOM 71 CA PRO 6 -1.362 37.700 -0.166 1.00 8.11 C ATOM 72 C PRO 6 -0.995 36.485 0.775 1.00 8.11 C ATOM 73 O PRO 6 -1.271 36.539 1.976 1.00 8.11 O ATOM 74 CB PRO 6 -0.167 38.719 -0.087 1.00 8.11 C ATOM 75 CG PRO 6 -0.442 39.671 1.043 1.00 8.11 C ATOM 76 CD PRO 6 -1.931 39.860 0.878 1.00 8.11 C ATOM 84 N TRP 7 -0.307 35.490 0.220 1.00 7.12 N ATOM 85 CA TRP 7 0.541 34.554 0.986 1.00 7.12 C ATOM 86 C TRP 7 1.791 35.340 1.495 1.00 7.12 C ATOM 87 O TRP 7 2.411 36.198 0.791 1.00 7.12 O ATOM 88 CB TRP 7 0.829 33.330 0.156 1.00 7.12 C ATOM 89 CG TRP 7 1.881 32.457 0.884 1.00 7.12 C ATOM 90 CD1 TRP 7 1.689 31.552 1.851 1.00 7.12 C ATOM 91 CD2 TRP 7 3.293 32.461 0.773 1.00 7.12 C ATOM 92 CE2 TRP 7 3.889 31.550 1.667 1.00 7.12 C ATOM 93 CE3 TRP 7 4.179 33.125 -0.105 1.00 7.12 C ATOM 94 NE1 TRP 7 2.810 31.015 2.389 1.00 7.12 N ATOM 95 CZ2 TRP 7 5.237 31.306 1.644 1.00 7.12 C ATOM 96 CZ3 TRP 7 5.569 32.803 -0.141 1.00 7.12 C ATOM 97 CH2 TRP 7 6.110 31.885 0.779 1.00 7.12 C ATOM 108 N VAL 8 2.137 35.050 2.750 1.00 6.23 N ATOM 109 CA VAL 8 3.204 35.735 3.476 1.00 6.23 C ATOM 110 C VAL 8 4.210 34.731 4.073 1.00 6.23 C ATOM 111 O VAL 8 5.376 35.027 4.092 1.00 6.23 O ATOM 112 CB VAL 8 2.641 36.766 4.454 1.00 6.23 C ATOM 113 CG1 VAL 8 1.866 37.878 3.752 1.00 6.23 C ATOM 114 CG2 VAL 8 1.834 36.159 5.556 1.00 6.23 C ATOM 124 N GLY 9 3.697 33.603 4.606 1.00 5.84 N ATOM 125 CA GLY 9 4.495 32.595 5.357 1.00 5.84 C ATOM 126 C GLY 9 3.464 31.623 5.957 1.00 5.84 C ATOM 127 O GLY 9 2.219 31.757 5.814 1.00 5.84 O ATOM 131 N SER 10 3.993 30.650 6.736 1.00 5.54 N ATOM 132 CA SER 10 3.223 29.577 7.425 1.00 5.54 C ATOM 133 C SER 10 3.840 29.189 8.788 1.00 5.54 C ATOM 134 O SER 10 4.799 29.760 9.255 1.00 5.54 O ATOM 135 CB SER 10 3.029 28.430 6.444 1.00 5.54 C ATOM 136 OG SER 10 2.061 27.660 6.882 1.00 5.54 O ATOM 142 N SER 11 3.243 28.138 9.420 1.00 5.29 N ATOM 143 CA SER 11 3.646 27.413 10.660 1.00 5.29 C ATOM 144 C SER 11 3.205 26.034 10.795 1.00 5.29 C ATOM 145 O SER 11 2.131 25.701 10.257 1.00 5.29 O ATOM 146 CB SER 11 3.225 28.274 11.816 1.00 5.29 C ATOM 147 OG SER 11 3.738 27.885 13.157 1.00 5.29 O ATOM 153 N TYR 12 3.956 25.157 11.471 1.00 5.39 N ATOM 154 CA TYR 12 3.666 23.685 11.425 1.00 5.39 C ATOM 155 C TYR 12 2.209 23.215 11.647 1.00 5.39 C ATOM 156 O TYR 12 1.823 22.298 10.957 1.00 5.39 O ATOM 157 CB TYR 12 4.618 23.142 12.511 1.00 5.39 C ATOM 158 CG TYR 12 4.393 21.776 12.969 1.00 5.39 C ATOM 159 CD1 TYR 12 3.716 21.488 14.201 1.00 5.39 C ATOM 160 CD2 TYR 12 4.688 20.647 12.146 1.00 5.39 C ATOM 161 CE1 TYR 12 3.330 20.216 14.617 1.00 5.39 C ATOM 162 CE2 TYR 12 4.371 19.350 12.626 1.00 5.39 C ATOM 163 CZ TYR 12 3.617 19.112 13.774 1.00 5.39 C ATOM 164 OH TYR 12 3.270 17.874 14.164 1.00 5.39 O ATOM 174 N VAL 13 1.440 23.768 12.544 1.00 5.22 N ATOM 175 CA VAL 13 0.006 23.583 12.731 1.00 5.22 C ATOM 176 C VAL 13 -0.846 23.500 11.364 1.00 5.22 C ATOM 177 O VAL 13 -1.762 22.700 11.217 1.00 5.22 O ATOM 178 CB VAL 13 -0.635 24.760 13.608 1.00 5.22 C ATOM 179 CG1 VAL 13 -0.778 26.173 12.997 1.00 5.22 C ATOM 180 CG2 VAL 13 -2.077 24.389 14.079 1.00 5.22 C ATOM 190 N ALA 14 -0.442 24.326 10.352 1.00 5.31 N ATOM 191 CA ALA 14 -1.260 24.677 9.203 1.00 5.31 C ATOM 192 C ALA 14 -0.993 23.691 8.094 1.00 5.31 C ATOM 193 O ALA 14 0.185 23.130 7.922 1.00 5.31 O ATOM 194 CB ALA 14 -1.024 26.117 8.797 1.00 5.31 C ATOM 200 N GLU 15 -1.935 23.539 7.151 1.00 6.18 N ATOM 201 CA GLU 15 -1.800 22.838 5.811 1.00 6.18 C ATOM 202 C GLU 15 -1.339 23.812 4.695 1.00 6.18 C ATOM 203 O GLU 15 -1.168 23.363 3.547 1.00 6.18 O ATOM 204 CB GLU 15 -3.075 22.202 5.415 1.00 6.18 C ATOM 205 CG GLU 15 -3.639 21.107 6.375 1.00 6.18 C ATOM 206 CD GLU 15 -2.613 20.137 6.912 1.00 6.18 C ATOM 207 OE1 GLU 15 -1.972 19.479 6.085 1.00 6.18 O ATOM 208 OE2 GLU 15 -2.370 19.930 8.145 1.00 6.18 O ATOM 215 N THR 16 -1.210 25.129 4.951 1.00 5.89 N ATOM 216 CA THR 16 -1.070 26.305 4.051 1.00 5.89 C ATOM 217 C THR 16 -0.929 27.636 4.797 1.00 5.89 C ATOM 218 O THR 16 -1.678 27.888 5.760 1.00 5.89 O ATOM 219 CB THR 16 -2.318 26.421 3.098 1.00 5.89 C ATOM 220 CG2 THR 16 -3.625 26.636 3.830 1.00 5.89 C ATOM 221 OG1 THR 16 -2.037 27.545 2.307 1.00 5.89 O ATOM 229 N GLY 17 -0.113 28.609 4.372 1.00 5.67 N ATOM 230 CA GLY 17 -0.025 29.870 5.036 1.00 5.67 C ATOM 231 C GLY 17 -1.280 30.729 5.301 1.00 5.67 C ATOM 232 O GLY 17 -1.440 31.431 6.297 1.00 5.67 O ATOM 236 N GLN 18 -2.225 30.768 4.331 1.00 5.69 N ATOM 237 CA GLN 18 -3.458 31.536 4.318 1.00 5.69 C ATOM 238 C GLN 18 -4.445 31.076 5.365 1.00 5.69 C ATOM 239 O GLN 18 -5.313 31.893 5.728 1.00 5.69 O ATOM 240 CB GLN 18 -4.019 31.385 2.863 1.00 5.69 C ATOM 241 CG GLN 18 -3.192 32.076 1.785 1.00 5.69 C ATOM 242 CD GLN 18 -3.364 33.565 1.647 1.00 5.69 C ATOM 243 NE2 GLN 18 -3.125 34.029 0.489 1.00 5.69 N ATOM 244 OE1 GLN 18 -3.638 34.354 2.555 1.00 5.69 O ATOM 253 N ASN 19 -4.274 29.810 5.863 1.00 5.35 N ATOM 254 CA ASN 19 -4.932 29.253 7.025 1.00 5.35 C ATOM 255 C ASN 19 -4.160 29.694 8.249 1.00 5.35 C ATOM 256 O ASN 19 -4.726 30.121 9.243 1.00 5.35 O ATOM 257 CB ASN 19 -4.985 27.739 6.949 1.00 5.35 C ATOM 258 CG ASN 19 -4.883 26.948 8.233 1.00 5.35 C ATOM 259 ND2 ASN 19 -5.518 27.346 9.323 1.00 5.35 N ATOM 260 OD1 ASN 19 -4.235 25.952 8.300 1.00 5.35 O ATOM 267 N TRP 20 -2.817 29.616 8.267 1.00 5.11 N ATOM 268 CA TRP 20 -1.909 29.968 9.447 1.00 5.11 C ATOM 269 C TRP 20 -2.154 31.411 9.994 1.00 5.11 C ATOM 270 O TRP 20 -2.112 31.541 11.230 1.00 5.11 O ATOM 271 CB TRP 20 -0.414 29.811 9.071 1.00 5.11 C ATOM 272 CG TRP 20 0.550 30.433 10.061 1.00 5.11 C ATOM 273 CD1 TRP 20 1.466 31.396 9.772 1.00 5.11 C ATOM 274 CD2 TRP 20 0.621 30.244 11.462 1.00 5.11 C ATOM 275 CE2 TRP 20 1.651 31.108 12.015 1.00 5.11 C ATOM 276 CE3 TRP 20 -0.100 29.513 12.403 1.00 5.11 C ATOM 277 NE1 TRP 20 2.271 31.579 10.856 1.00 5.11 N ATOM 278 CZ2 TRP 20 1.935 31.186 13.416 1.00 5.11 C ATOM 279 CZ3 TRP 20 0.189 29.530 13.738 1.00 5.11 C ATOM 280 CH2 TRP 20 1.205 30.357 14.270 1.00 5.11 C ATOM 291 N ALA 21 -2.567 32.369 9.121 1.00 5.33 N ATOM 292 CA ALA 21 -3.041 33.729 9.534 1.00 5.33 C ATOM 293 C ALA 21 -4.021 33.768 10.601 1.00 5.33 C ATOM 294 O ALA 21 -3.870 34.600 11.488 1.00 5.33 O ATOM 295 CB ALA 21 -3.698 34.417 8.271 1.00 5.33 C ATOM 301 N SER 22 -5.054 32.867 10.552 1.00 5.01 N ATOM 302 CA SER 22 -6.142 32.728 11.546 1.00 5.01 C ATOM 303 C SER 22 -5.632 32.468 12.923 1.00 5.01 C ATOM 304 O SER 22 -6.435 32.565 13.857 1.00 5.01 O ATOM 305 CB SER 22 -7.145 31.696 11.241 1.00 5.01 C ATOM 306 OG SER 22 -7.741 31.981 10.038 1.00 5.01 O ATOM 312 N LEU 23 -4.358 32.149 13.069 1.00 4.67 N ATOM 313 CA LEU 23 -3.592 31.737 14.206 1.00 4.67 C ATOM 314 C LEU 23 -2.386 32.644 14.568 1.00 4.67 C ATOM 315 O LEU 23 -2.243 32.895 15.740 1.00 4.67 O ATOM 316 CB LEU 23 -3.167 30.283 14.053 1.00 4.67 C ATOM 317 CG LEU 23 -4.397 29.357 13.793 1.00 4.67 C ATOM 318 CD1 LEU 23 -4.548 28.809 12.422 1.00 4.67 C ATOM 319 CD2 LEU 23 -4.257 28.145 14.760 1.00 4.67 C ATOM 331 N ALA 24 -1.676 33.097 13.554 1.00 4.87 N ATOM 332 CA ALA 24 -0.688 34.169 13.641 1.00 4.87 C ATOM 333 C ALA 24 -1.235 35.447 14.388 1.00 4.87 C ATOM 334 O ALA 24 -0.450 35.939 15.200 1.00 4.87 O ATOM 335 CB ALA 24 -0.230 34.383 12.216 1.00 4.87 C ATOM 341 N ALA 25 -2.440 35.936 14.090 1.00 5.00 N ATOM 342 CA ALA 25 -2.965 37.171 14.698 1.00 5.00 C ATOM 343 C ALA 25 -3.205 37.013 16.266 1.00 5.00 C ATOM 344 O ALA 25 -3.601 37.993 16.927 1.00 5.00 O ATOM 345 CB ALA 25 -4.362 37.424 14.021 1.00 5.00 C ATOM 351 N ASN 26 -2.999 35.815 16.829 1.00 4.61 N ATOM 352 CA ASN 26 -3.293 35.521 18.167 1.00 4.61 C ATOM 353 C ASN 26 -1.994 35.433 19.002 1.00 4.61 C ATOM 354 O ASN 26 -1.905 36.140 20.054 1.00 4.61 O ATOM 355 CB ASN 26 -4.296 34.303 18.294 1.00 4.61 C ATOM 356 CG ASN 26 -5.015 34.129 19.635 1.00 4.61 C ATOM 357 ND2 ASN 26 -5.332 32.911 19.943 1.00 4.61 N ATOM 358 OD1 ASN 26 -5.367 35.095 20.365 1.00 4.61 O ATOM 365 N GLU 27 -1.045 34.668 18.485 1.00 4.57 N ATOM 366 CA GLU 27 0.150 34.225 19.200 1.00 4.57 C ATOM 367 C GLU 27 1.277 35.281 19.245 1.00 4.57 C ATOM 368 O GLU 27 1.801 35.623 20.281 1.00 4.57 O ATOM 369 CB GLU 27 0.599 32.895 18.509 1.00 4.57 C ATOM 370 CG GLU 27 1.956 32.268 18.918 1.00 4.57 C ATOM 371 CD GLU 27 1.849 31.706 20.344 1.00 4.57 C ATOM 372 OE1 GLU 27 2.189 32.366 21.374 1.00 4.57 O ATOM 373 OE2 GLU 27 1.157 30.670 20.425 1.00 4.57 O ATOM 380 N LEU 28 1.659 35.951 18.128 1.00 4.85 N ATOM 381 CA LEU 28 2.855 36.801 18.022 1.00 4.85 C ATOM 382 C LEU 28 2.723 38.238 18.629 1.00 4.85 C ATOM 383 O LEU 28 3.494 39.156 18.414 1.00 4.85 O ATOM 384 CB LEU 28 3.397 36.790 16.532 1.00 4.85 C ATOM 385 CG LEU 28 3.496 35.444 15.853 1.00 4.85 C ATOM 386 CD1 LEU 28 3.034 35.428 14.455 1.00 4.85 C ATOM 387 CD2 LEU 28 4.818 34.735 15.886 1.00 4.85 C ATOM 399 N ARG 29 1.683 38.432 19.320 1.00 4.83 N ATOM 400 CA ARG 29 0.974 39.689 19.854 1.00 4.83 C ATOM 401 C ARG 29 0.867 39.532 21.417 1.00 4.83 C ATOM 402 O ARG 29 0.379 40.478 22.056 1.00 4.83 O ATOM 403 CB ARG 29 -0.415 39.969 19.225 1.00 4.83 C ATOM 404 CG ARG 29 -0.462 40.076 17.697 1.00 4.83 C ATOM 405 CD ARG 29 -1.705 40.795 17.075 1.00 4.83 C ATOM 406 NE ARG 29 -1.864 40.410 15.669 1.00 4.83 N ATOM 407 CZ ARG 29 -2.837 40.751 14.856 1.00 4.83 C ATOM 408 NH1 ARG 29 -3.975 41.300 15.278 1.00 4.83 N ATOM 409 NH2 ARG 29 -2.580 40.521 13.586 1.00 4.83 N ATOM 423 N VAL 30 1.283 38.433 22.009 1.00 4.67 N ATOM 424 CA VAL 30 1.163 38.242 23.421 1.00 4.67 C ATOM 425 C VAL 30 1.855 39.291 24.327 1.00 4.67 C ATOM 426 O VAL 30 2.885 39.779 23.964 1.00 4.67 O ATOM 427 CB VAL 30 1.604 36.833 23.842 1.00 4.67 C ATOM 428 CG1 VAL 30 1.865 36.554 25.374 1.00 4.67 C ATOM 429 CG2 VAL 30 0.573 35.765 23.370 1.00 4.67 C ATOM 439 N THR 31 1.278 39.552 25.501 1.00 4.76 N ATOM 440 CA THR 31 1.720 40.550 26.469 1.00 4.76 C ATOM 441 C THR 31 1.866 39.963 27.884 1.00 4.76 C ATOM 442 O THR 31 0.967 39.201 28.261 1.00 4.76 O ATOM 443 CB THR 31 0.799 41.786 26.313 1.00 4.76 C ATOM 444 CG2 THR 31 1.077 42.729 25.131 1.00 4.76 C ATOM 445 OG1 THR 31 -0.586 41.548 26.377 1.00 4.76 O ATOM 453 N GLU 32 2.853 40.409 28.688 1.00 4.68 N ATOM 454 CA GLU 32 2.733 40.152 30.201 1.00 4.68 C ATOM 455 C GLU 32 2.693 38.635 30.651 1.00 4.68 C ATOM 456 O GLU 32 1.930 38.174 31.478 1.00 4.68 O ATOM 457 CB GLU 32 1.624 40.980 30.781 1.00 4.68 C ATOM 458 CG GLU 32 1.611 42.503 30.418 1.00 4.68 C ATOM 459 CD GLU 32 0.438 43.252 31.005 1.00 4.68 C ATOM 460 OE1 GLU 32 -0.652 43.452 30.428 1.00 4.68 O ATOM 461 OE2 GLU 32 0.588 43.919 32.080 1.00 4.68 O ATOM 468 N ARG 33 3.573 37.826 30.001 1.00 4.31 N ATOM 469 CA ARG 33 3.851 36.376 29.957 1.00 4.31 C ATOM 470 C ARG 33 5.407 36.136 29.856 1.00 4.31 C ATOM 471 O ARG 33 5.845 35.622 28.851 1.00 4.31 O ATOM 472 CB ARG 33 2.992 35.598 28.911 1.00 4.31 C ATOM 473 CG ARG 33 1.478 35.311 29.439 1.00 4.31 C ATOM 474 CD ARG 33 0.725 34.652 28.293 1.00 4.31 C ATOM 475 NE ARG 33 1.236 33.333 27.946 1.00 4.31 N ATOM 476 CZ ARG 33 1.123 32.624 26.810 1.00 4.31 C ATOM 477 NH1 ARG 33 0.348 33.093 25.925 1.00 4.31 N ATOM 478 NH2 ARG 33 1.707 31.515 26.583 1.00 4.31 N ATOM 492 N PRO 34 6.134 36.421 30.909 1.00 4.31 N ATOM 493 CA PRO 34 7.557 36.434 30.780 1.00 4.31 C ATOM 494 C PRO 34 8.283 35.114 30.651 1.00 4.31 C ATOM 495 O PRO 34 9.458 35.029 30.244 1.00 4.31 O ATOM 496 CB PRO 34 8.142 37.239 31.937 1.00 4.31 C ATOM 497 CG PRO 34 6.998 38.040 32.510 1.00 4.31 C ATOM 498 CD PRO 34 5.717 37.154 32.115 1.00 4.31 C ATOM 506 N PHE 35 7.617 34.033 31.025 1.00 4.17 N ATOM 507 CA PHE 35 8.174 32.753 30.590 1.00 4.17 C ATOM 508 C PHE 35 7.965 32.610 29.086 1.00 4.17 C ATOM 509 O PHE 35 8.955 32.298 28.423 1.00 4.17 O ATOM 510 CB PHE 35 7.449 31.694 31.329 1.00 4.17 C ATOM 511 CG PHE 35 7.328 30.402 30.534 1.00 4.17 C ATOM 512 CD1 PHE 35 6.050 29.816 30.357 1.00 4.17 C ATOM 513 CD2 PHE 35 8.513 29.708 30.223 1.00 4.17 C ATOM 514 CE1 PHE 35 5.946 28.552 29.700 1.00 4.17 C ATOM 515 CE2 PHE 35 8.337 28.448 29.527 1.00 4.17 C ATOM 516 CZ PHE 35 7.083 27.927 29.164 1.00 4.17 C ATOM 526 N TRP 36 6.741 32.785 28.552 1.00 4.27 N ATOM 527 CA TRP 36 6.489 32.621 27.085 1.00 4.27 C ATOM 528 C TRP 36 7.161 33.530 26.119 1.00 4.27 C ATOM 529 O TRP 36 7.491 33.036 25.028 1.00 4.27 O ATOM 530 CB TRP 36 5.004 32.697 26.865 1.00 4.27 C ATOM 531 CG TRP 36 4.597 32.096 25.629 1.00 4.27 C ATOM 532 CD1 TRP 36 3.918 32.790 24.670 1.00 4.27 C ATOM 533 CD2 TRP 36 4.682 30.721 25.140 1.00 4.27 C ATOM 534 CE2 TRP 36 3.999 30.654 23.884 1.00 4.27 C ATOM 535 CE3 TRP 36 5.351 29.532 25.569 1.00 4.27 C ATOM 536 NE1 TRP 36 3.459 31.885 23.684 1.00 4.27 N ATOM 537 CZ2 TRP 36 3.936 29.523 23.190 1.00 4.27 C ATOM 538 CZ3 TRP 36 5.224 28.341 24.855 1.00 4.27 C ATOM 539 CH2 TRP 36 4.557 28.325 23.620 1.00 4.27 C ATOM 550 N ILE 37 7.389 34.741 26.473 1.00 4.44 N ATOM 551 CA ILE 37 8.142 35.777 25.743 1.00 4.44 C ATOM 552 C ILE 37 9.633 35.357 25.607 1.00 4.44 C ATOM 553 O ILE 37 10.212 35.461 24.546 1.00 4.44 O ATOM 554 CB ILE 37 7.782 37.154 26.447 1.00 4.44 C ATOM 555 CG1 ILE 37 6.425 37.602 25.899 1.00 4.44 C ATOM 556 CG2 ILE 37 8.988 38.151 26.280 1.00 4.44 C ATOM 557 CD1 ILE 37 5.594 38.607 26.691 1.00 4.44 C ATOM 569 N SER 38 10.217 34.822 26.628 1.00 4.41 N ATOM 570 CA SER 38 11.566 34.102 26.533 1.00 4.41 C ATOM 571 C SER 38 11.464 32.728 25.886 1.00 4.41 C ATOM 572 O SER 38 12.488 32.234 25.335 1.00 4.41 O ATOM 573 CB SER 38 12.174 33.972 27.949 1.00 4.41 C ATOM 574 OG SER 38 12.526 35.260 28.502 1.00 4.41 O ATOM 580 N SER 39 10.316 32.055 25.774 1.00 4.38 N ATOM 581 CA SER 39 10.156 30.781 25.122 1.00 4.38 C ATOM 582 C SER 39 9.855 30.817 23.562 1.00 4.38 C ATOM 583 O SER 39 9.164 29.989 22.988 1.00 4.38 O ATOM 584 CB SER 39 9.187 29.932 25.935 1.00 4.38 C ATOM 585 OG SER 39 9.900 28.690 26.098 1.00 4.38 O ATOM 591 N PHE 40 10.431 31.870 22.893 1.00 4.70 N ATOM 592 CA PHE 40 10.467 31.981 21.444 1.00 4.70 C ATOM 593 C PHE 40 11.753 31.247 20.826 1.00 4.70 C ATOM 594 O PHE 40 11.731 30.937 19.614 1.00 4.70 O ATOM 595 CB PHE 40 10.286 33.480 21.115 1.00 4.70 C ATOM 596 CG PHE 40 8.924 33.929 20.637 1.00 4.70 C ATOM 597 CD1 PHE 40 8.290 34.877 21.411 1.00 4.70 C ATOM 598 CD2 PHE 40 8.466 33.540 19.363 1.00 4.70 C ATOM 599 CE1 PHE 40 7.080 35.491 20.965 1.00 4.70 C ATOM 600 CE2 PHE 40 7.206 34.083 18.988 1.00 4.70 C ATOM 601 CZ PHE 40 6.501 35.047 19.744 1.00 4.70 C ATOM 611 N ILE 41 12.723 31.029 21.630 1.00 4.77 N ATOM 612 CA ILE 41 14.110 30.670 21.279 1.00 4.77 C ATOM 613 C ILE 41 14.866 29.736 22.304 1.00 4.77 C ATOM 614 O ILE 41 14.400 29.595 23.465 1.00 4.77 O ATOM 615 CB ILE 41 14.879 32.001 21.000 1.00 4.77 C ATOM 616 CG1 ILE 41 15.169 32.743 22.364 1.00 4.77 C ATOM 617 CG2 ILE 41 14.323 32.903 19.834 1.00 4.77 C ATOM 618 CD1 ILE 41 16.294 33.806 22.165 1.00 4.77 C ATOM 630 N GLY 42 16.028 29.147 21.924 1.00 4.60 N ATOM 631 CA GLY 42 16.807 28.372 22.870 1.00 4.60 C ATOM 632 C GLY 42 18.207 28.023 22.502 1.00 4.60 C ATOM 633 O GLY 42 18.563 28.259 21.294 1.00 4.60 O ATOM 637 N ARG 43 18.982 27.569 23.522 1.00 4.75 N ATOM 638 CA ARG 43 20.413 27.394 23.518 1.00 4.75 C ATOM 639 C ARG 43 20.999 26.075 24.082 1.00 4.75 C ATOM 640 O ARG 43 20.667 25.631 25.181 1.00 4.75 O ATOM 641 CB ARG 43 21.023 28.657 24.236 1.00 4.75 C ATOM 642 CG ARG 43 20.722 30.027 23.556 1.00 4.75 C ATOM 643 CD ARG 43 21.279 30.267 22.190 1.00 4.75 C ATOM 644 NE ARG 43 22.720 30.070 22.288 1.00 4.75 N ATOM 645 CZ ARG 43 23.636 30.381 21.421 1.00 4.75 C ATOM 646 NH1 ARG 43 23.423 30.824 20.215 1.00 4.75 N ATOM 647 NH2 ARG 43 24.912 30.265 21.732 1.00 4.75 N ATOM 661 N SER 44 21.987 25.471 23.383 1.00 4.81 N ATOM 662 CA SER 44 23.021 24.502 23.828 1.00 4.81 C ATOM 663 C SER 44 22.474 23.145 24.385 1.00 4.81 C ATOM 664 O SER 44 23.257 22.317 24.843 1.00 4.81 O ATOM 665 CB SER 44 23.852 25.168 25.027 1.00 4.81 C ATOM 666 OG SER 44 24.516 26.313 24.488 1.00 4.81 O ATOM 672 N LYS 45 21.121 22.969 24.406 1.00 4.81 N ATOM 673 CA LYS 45 20.451 21.730 24.750 1.00 4.81 C ATOM 674 C LYS 45 20.769 20.641 23.728 1.00 4.81 C ATOM 675 O LYS 45 20.989 20.946 22.551 1.00 4.81 O ATOM 676 CB LYS 45 18.990 21.945 24.888 1.00 4.81 C ATOM 677 CG LYS 45 18.263 20.711 25.482 1.00 4.81 C ATOM 678 CD LYS 45 16.875 21.100 25.953 1.00 4.81 C ATOM 679 CE LYS 45 16.208 19.756 26.529 1.00 4.81 C ATOM 680 NZ LYS 45 15.842 18.775 25.486 1.00 4.81 N TER END