####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS406_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS406_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 8 - 42 4.98 7.23 LCS_AVERAGE: 74.59 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 19 - 36 2.00 8.32 LONGEST_CONTINUOUS_SEGMENT: 18 20 - 37 1.93 8.47 LCS_AVERAGE: 28.77 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 0.96 9.29 LCS_AVERAGE: 18.49 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 12 0 3 3 3 4 7 8 12 16 20 24 27 29 31 33 34 36 37 39 40 LCS_GDT V 3 V 3 5 5 12 3 5 5 5 6 6 6 12 16 19 21 24 27 29 32 34 34 37 39 40 LCS_GDT Q 4 Q 4 5 5 15 3 5 5 5 6 6 10 12 16 19 21 24 27 29 32 34 35 37 39 40 LCS_GDT G 5 G 5 5 5 33 3 5 5 5 6 6 10 15 17 20 24 28 29 31 33 34 36 37 39 40 LCS_GDT P 6 P 6 5 5 33 3 5 5 5 6 6 10 12 17 20 23 28 29 31 33 34 36 37 39 40 LCS_GDT W 7 W 7 5 5 33 3 5 5 5 6 6 7 10 15 19 22 25 28 30 33 34 36 37 39 40 LCS_GDT V 8 V 8 3 11 35 3 7 14 16 16 18 19 21 25 26 26 28 29 31 33 34 36 37 39 40 LCS_GDT G 9 G 9 6 11 35 3 5 6 9 10 18 19 21 24 26 26 28 29 31 33 34 36 37 39 40 LCS_GDT S 10 S 10 8 11 35 3 5 8 9 15 17 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT S 11 S 11 8 11 35 3 5 8 9 10 12 14 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT Y 12 Y 12 8 11 35 3 6 8 9 10 12 14 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT V 13 V 13 8 11 35 3 6 8 9 10 16 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT A 14 A 14 8 11 35 4 6 8 9 10 12 14 17 21 24 26 28 30 32 34 34 36 37 39 40 LCS_GDT E 15 E 15 8 11 35 4 6 8 9 10 12 14 14 15 16 23 26 30 31 34 34 35 36 39 40 LCS_GDT T 16 T 16 8 11 35 4 6 8 9 10 12 14 14 15 21 25 28 30 32 34 34 36 37 39 40 LCS_GDT G 17 G 17 8 11 35 4 6 8 9 10 12 14 14 15 17 18 23 28 30 34 34 36 37 39 40 LCS_GDT Q 18 Q 18 4 11 35 3 3 4 8 10 12 14 14 21 24 26 28 30 32 34 34 36 37 39 40 LCS_GDT N 19 N 19 4 18 35 3 3 4 4 10 17 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT W 20 W 20 13 18 35 7 10 13 16 16 18 19 21 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT A 21 A 21 13 18 35 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT S 22 S 22 13 18 35 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT L 23 L 23 13 18 35 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT A 24 A 24 13 18 35 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT A 25 A 25 13 18 35 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT N 26 N 26 13 18 35 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT E 27 E 27 13 18 35 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT L 28 L 28 13 18 35 6 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT R 29 R 29 13 18 35 6 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT V 30 V 30 13 18 35 6 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT T 31 T 31 13 18 35 3 9 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT E 32 E 32 13 18 35 3 9 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT R 33 R 33 11 18 35 3 8 12 15 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT P 34 P 34 5 18 35 6 9 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT F 35 F 35 3 18 35 3 3 3 5 8 15 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT W 36 W 36 6 18 35 5 8 13 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT I 37 I 37 7 18 35 3 6 7 9 12 14 19 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT S 38 S 38 7 9 35 4 6 7 8 8 9 14 18 22 24 27 28 30 32 34 34 36 37 39 40 LCS_GDT S 39 S 39 7 9 35 4 6 7 8 8 10 14 19 22 24 27 28 30 32 34 34 36 37 39 40 LCS_GDT F 40 F 40 7 9 35 4 6 7 8 9 13 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT I 41 I 41 7 9 35 4 6 7 8 8 11 14 18 22 24 27 28 30 32 34 34 36 37 39 40 LCS_GDT G 42 G 42 7 9 35 3 6 7 8 8 9 12 17 20 24 26 28 30 32 34 34 35 36 38 39 LCS_GDT R 43 R 43 7 9 34 0 6 7 8 8 10 11 14 20 22 25 28 30 32 34 34 35 36 38 39 LCS_GDT S 44 S 44 3 9 33 1 3 4 5 6 9 10 11 12 15 19 21 28 29 29 31 33 33 35 35 LCS_GDT K 45 K 45 3 3 14 0 3 3 4 4 5 5 8 10 11 13 15 17 18 20 20 24 25 26 31 LCS_AVERAGE LCS_A: 40.62 ( 18.49 28.77 74.59 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 GDT PERCENT_AT 15.91 22.73 31.82 36.36 36.36 40.91 45.45 50.00 56.82 59.09 61.36 63.64 68.18 72.73 77.27 77.27 81.82 84.09 88.64 90.91 GDT RMS_LOCAL 0.20 0.59 0.98 1.18 1.18 1.46 2.47 2.65 2.87 2.96 3.48 3.58 4.10 4.48 4.80 4.68 5.07 5.22 5.54 5.75 GDT RMS_ALL_AT 9.20 8.85 8.86 8.76 8.76 8.78 7.47 7.47 7.62 7.71 7.38 7.44 7.40 7.34 7.39 7.86 7.19 7.49 7.33 7.27 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 9.032 0 0.032 0.047 10.905 0.000 0.000 - LGA V 3 V 3 11.166 0 0.582 0.628 12.694 0.000 0.000 12.694 LGA Q 4 Q 4 11.637 0 0.085 0.904 18.465 0.000 0.000 18.189 LGA G 5 G 5 8.799 0 0.136 0.136 10.392 0.000 0.000 - LGA P 6 P 6 8.218 0 0.687 0.615 9.672 0.000 0.000 9.239 LGA W 7 W 7 9.683 0 0.520 1.240 20.130 0.000 0.000 19.739 LGA V 8 V 8 4.351 0 0.602 1.449 6.365 10.909 6.234 6.365 LGA G 9 G 9 5.439 0 0.440 0.440 5.439 7.727 7.727 - LGA S 10 S 10 2.797 0 0.037 0.135 3.446 22.727 22.727 2.636 LGA S 11 S 11 4.055 0 0.117 0.597 5.415 8.636 6.667 4.122 LGA Y 12 Y 12 4.538 0 0.054 1.266 12.810 3.182 1.212 12.810 LGA V 13 V 13 4.227 0 0.164 1.207 8.335 5.909 3.636 5.819 LGA A 14 A 14 8.765 0 0.084 0.087 12.526 0.000 0.000 - LGA E 15 E 15 11.904 0 0.043 1.149 15.012 0.000 0.000 15.012 LGA T 16 T 16 10.029 0 0.040 0.152 10.854 0.000 0.000 5.841 LGA G 17 G 17 10.893 0 0.596 0.596 10.893 0.000 0.000 - LGA Q 18 Q 18 8.363 0 0.661 0.643 15.445 0.000 0.000 12.160 LGA N 19 N 19 3.106 0 0.040 0.990 6.346 20.455 13.864 6.346 LGA W 20 W 20 4.104 0 0.585 1.302 15.225 20.000 5.714 15.225 LGA A 21 A 21 2.207 0 0.025 0.032 2.928 45.455 46.545 - LGA S 22 S 22 1.724 0 0.035 0.635 2.469 54.545 51.212 1.730 LGA L 23 L 23 1.899 0 0.058 0.146 4.378 58.182 36.818 4.378 LGA A 24 A 24 2.033 0 0.021 0.025 2.515 44.545 41.091 - LGA A 25 A 25 1.595 0 0.027 0.026 2.144 47.727 51.273 - LGA N 26 N 26 1.407 0 0.052 0.107 1.734 58.182 60.000 1.703 LGA E 27 E 27 1.672 0 0.068 0.869 2.849 45.455 46.061 2.849 LGA L 28 L 28 2.327 0 0.040 0.059 2.759 35.455 35.455 2.408 LGA R 29 R 29 2.321 0 0.086 1.406 10.121 38.182 19.008 10.121 LGA V 30 V 30 2.203 0 0.097 1.135 3.292 55.909 42.338 3.292 LGA T 31 T 31 0.893 0 0.655 0.970 4.498 56.364 44.156 2.675 LGA E 32 E 32 1.268 0 0.095 1.435 4.196 65.909 41.818 3.850 LGA R 33 R 33 3.096 0 0.021 0.977 14.810 15.909 5.785 14.810 LGA P 34 P 34 2.260 0 0.608 0.614 5.008 25.909 25.195 3.290 LGA F 35 F 35 3.692 0 0.604 1.391 10.111 34.545 12.562 9.956 LGA W 36 W 36 0.883 0 0.598 1.036 5.825 69.545 30.390 5.476 LGA I 37 I 37 3.859 0 0.106 0.953 8.291 9.091 4.545 8.291 LGA S 38 S 38 7.619 0 0.106 0.655 10.532 0.000 0.000 10.532 LGA S 39 S 39 7.305 0 0.098 0.096 8.395 0.000 0.000 6.220 LGA F 40 F 40 4.225 0 0.157 1.337 8.056 1.818 5.785 7.812 LGA I 41 I 41 8.146 0 0.609 0.565 11.602 0.000 0.000 10.971 LGA G 42 G 42 10.804 0 0.579 0.579 13.168 0.000 0.000 - LGA R 43 R 43 11.308 0 0.615 1.135 13.051 0.000 0.000 10.795 LGA S 44 S 44 16.923 0 0.679 0.830 20.755 0.000 0.000 17.084 LGA K 45 K 45 20.414 0 0.049 0.824 22.427 0.000 0.000 19.668 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.028 7.114 8.426 19.597 15.178 8.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 22 2.65 46.591 43.287 0.800 LGA_LOCAL RMSD: 2.651 Number of atoms: 22 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.468 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.028 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.985793 * X + -0.090091 * Y + -0.141757 * Z + 6.044755 Y_new = 0.057285 * X + -0.613041 * Y + 0.787971 * Z + 46.057388 Z_new = -0.157893 * X + -0.784897 * Y + -0.599171 * Z + -10.225994 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.058045 0.158556 -2.222803 [DEG: 3.3257 9.0846 -127.3572 ] ZXZ: -2.963595 2.213262 -2.943079 [DEG: -169.8015 126.8106 -168.6260 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS406_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS406_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 22 2.65 43.287 7.03 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS406_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT 3a1y_A, 4aor_D ATOM 20 N ALA 2 4.844 40.690 15.716 1.00 37.61 N ATOM 21 CA ALA 2 3.834 41.661 16.137 1.00 36.78 C ATOM 22 C ALA 2 4.510 42.901 16.746 1.00 42.10 C ATOM 23 O ALA 2 5.574 42.773 17.361 1.00 49.83 O ATOM 24 CB ALA 2 2.879 41.027 17.123 1.00 40.41 C ATOM 30 N VAL 3 3.921 44.099 16.589 1.00 43.37 N ATOM 31 CA VAL 3 2.606 44.330 15.984 1.00 38.77 C ATOM 32 C VAL 3 2.626 44.517 14.476 1.00 34.99 C ATOM 33 O VAL 3 1.897 43.817 13.765 1.00 29.84 O ATOM 34 CB VAL 3 1.941 45.548 16.634 1.00 45.13 C ATOM 35 CG1 VAL 3 0.631 45.837 15.943 1.00 44.04 C ATOM 36 CG2 VAL 3 1.731 45.260 18.108 1.00 49.59 C ATOM 46 N GLN 4 3.448 45.431 13.965 1.00 39.53 N ATOM 47 CA GLN 4 3.439 45.634 12.524 1.00 36.51 C ATOM 48 C GLN 4 4.416 44.701 11.851 1.00 34.04 C ATOM 49 O GLN 4 5.586 44.614 12.240 1.00 39.77 O ATOM 50 CB GLN 4 3.759 47.087 12.162 1.00 43.75 C ATOM 51 CG GLN 4 2.772 48.113 12.690 1.00 48.62 C ATOM 52 CD GLN 4 1.350 47.949 12.132 1.00 44.23 C ATOM 53 OE1 GLN 4 1.130 47.902 10.915 1.00 41.75 O ATOM 54 NE2 GLN 4 0.390 47.902 13.044 1.00 44.83 N ATOM 63 N GLY 5 3.910 44.002 10.857 1.00 29.15 N ATOM 64 CA GLY 5 4.618 43.006 10.079 1.00 28.32 C ATOM 65 C GLY 5 4.962 43.509 8.697 1.00 27.06 C ATOM 66 O GLY 5 5.061 44.719 8.503 1.00 28.36 O ATOM 70 N PRO 6 5.028 42.594 7.700 1.00 24.92 N ATOM 71 CA PRO 6 4.724 41.174 7.717 1.00 23.88 C ATOM 72 C PRO 6 5.524 40.444 8.743 1.00 26.88 C ATOM 73 O PRO 6 6.613 40.862 9.127 1.00 31.04 O ATOM 74 CB PRO 6 5.012 40.747 6.283 1.00 23.88 C ATOM 75 CG PRO 6 4.816 41.993 5.490 1.00 23.08 C ATOM 76 CD PRO 6 5.345 43.079 6.399 1.00 23.99 C ATOM 84 N TRP 7 4.921 39.411 9.275 1.00 26.39 N ATOM 85 CA TRP 7 5.529 38.735 10.383 1.00 30.20 C ATOM 86 C TRP 7 6.549 37.682 9.935 1.00 35.17 C ATOM 87 O TRP 7 7.730 37.740 10.305 1.00 43.00 O ATOM 88 CB TRP 7 4.392 38.130 11.217 1.00 27.59 C ATOM 89 CG TRP 7 3.456 39.183 11.937 1.00 24.85 C ATOM 90 CD1 TRP 7 3.753 40.484 12.191 1.00 26.39 C ATOM 91 CD2 TRP 7 2.084 39.003 12.462 1.00 22.82 C ATOM 92 NE1 TRP 7 2.684 41.107 12.811 1.00 25.17 N ATOM 93 CE2 TRP 7 1.682 40.232 12.983 1.00 23.32 C ATOM 94 CE3 TRP 7 1.187 37.927 12.523 1.00 22.29 C ATOM 95 CZ2 TRP 7 0.433 40.420 13.557 1.00 23.19 C ATOM 96 CZ3 TRP 7 -0.063 38.120 13.093 1.00 23.16 C ATOM 97 CH2 TRP 7 -0.428 39.325 13.594 1.00 23.88 C ATOM 108 N VAL 8 6.135 36.770 9.062 1.00 32.65 N ATOM 109 CA VAL 8 7.006 35.670 8.650 1.00 37.68 C ATOM 110 C VAL 8 7.100 35.465 7.155 1.00 37.26 C ATOM 111 O VAL 8 6.454 36.162 6.369 1.00 33.25 O ATOM 112 CB VAL 8 6.554 34.363 9.273 1.00 37.40 C ATOM 113 CG1 VAL 8 6.601 34.472 10.790 1.00 40.24 C ATOM 114 CG2 VAL 8 5.175 34.025 8.752 1.00 29.97 C ATOM 124 N GLY 9 7.976 34.537 6.764 1.00 43.66 N ATOM 125 CA GLY 9 8.091 34.132 5.377 1.00 45.54 C ATOM 126 C GLY 9 7.457 32.755 5.131 1.00 38.92 C ATOM 127 O GLY 9 6.727 32.201 5.979 1.00 34.15 O ATOM 131 N SER 10 7.834 32.180 3.986 1.00 40.73 N ATOM 132 CA SER 10 7.315 30.918 3.477 1.00 39.38 C ATOM 133 C SER 10 7.547 29.707 4.373 1.00 39.69 C ATOM 134 O SER 10 6.791 28.736 4.301 1.00 42.10 O ATOM 135 CB SER 10 7.926 30.643 2.118 1.00 46.70 C ATOM 136 OG SER 10 9.308 30.456 2.222 1.00 49.83 O ATOM 142 N SER 11 8.497 29.801 5.303 1.00 42.01 N ATOM 143 CA SER 11 8.814 28.686 6.194 1.00 45.33 C ATOM 144 C SER 11 7.607 28.237 7.028 1.00 41.75 C ATOM 145 O SER 11 7.578 27.103 7.500 1.00 47.70 O ATOM 146 CB SER 11 9.953 29.068 7.119 1.00 49.34 C ATOM 147 OG SER 11 9.564 30.079 7.996 1.00 45.95 O ATOM 153 N TYR 12 6.606 29.111 7.197 1.00 35.67 N ATOM 154 CA TYR 12 5.403 28.712 7.922 1.00 39.61 C ATOM 155 C TYR 12 4.184 28.809 7.012 1.00 36.38 C ATOM 156 O TYR 12 3.281 27.941 7.008 1.00 39.69 O ATOM 157 CB TYR 12 5.159 29.622 9.126 1.00 38.92 C ATOM 158 CG TYR 12 6.247 29.636 10.142 1.00 39.85 C ATOM 159 CD1 TYR 12 7.037 30.740 10.225 1.00 37.40 C ATOM 160 CD2 TYR 12 6.449 28.567 10.996 1.00 47.93 C ATOM 161 CE1 TYR 12 8.048 30.815 11.151 1.00 43.47 C ATOM 162 CE2 TYR 12 7.464 28.627 11.936 1.00 48.04 C ATOM 163 CZ TYR 12 8.262 29.750 12.014 1.00 43.37 C ATOM 164 OH TYR 12 9.270 29.818 12.946 1.00 48.74 O ATOM 174 N VAL 13 4.146 29.842 6.187 1.00 30.75 N ATOM 175 CA VAL 13 2.899 30.069 5.517 1.00 31.28 C ATOM 176 C VAL 13 2.739 29.336 4.216 1.00 36.78 C ATOM 177 O VAL 13 1.619 29.202 3.721 1.00 41.49 O ATOM 178 CB VAL 13 2.686 31.549 5.362 1.00 30.61 C ATOM 179 CG1 VAL 13 2.756 32.116 6.774 1.00 26.56 C ATOM 180 CG2 VAL 13 3.698 32.130 4.416 1.00 33.08 C ATOM 190 N ALA 14 3.817 28.745 3.703 1.00 38.11 N ATOM 191 CA ALA 14 3.721 27.924 2.517 1.00 44.33 C ATOM 192 C ALA 14 2.769 26.759 2.757 1.00 42.19 C ATOM 193 O ALA 14 2.187 26.221 1.810 1.00 48.98 O ATOM 194 CB ALA 14 5.085 27.411 2.113 1.00 48.98 C ATOM 200 N GLU 15 2.649 26.315 4.020 1.00 37.26 N ATOM 201 CA GLU 15 1.802 25.180 4.344 1.00 40.90 C ATOM 202 C GLU 15 0.477 25.609 4.980 1.00 41.32 C ATOM 203 O GLU 15 -0.534 24.914 4.812 1.00 47.36 O ATOM 204 CB GLU 15 2.544 24.236 5.296 1.00 44.04 C ATOM 205 CG GLU 15 3.811 23.611 4.699 1.00 46.27 C ATOM 206 CD GLU 15 4.529 22.668 5.650 1.00 46.59 C ATOM 207 OE1 GLU 15 4.123 22.564 6.783 1.00 49.22 O ATOM 208 OE2 GLU 15 5.487 22.058 5.234 1.00 51.76 O ATOM 215 N THR 16 0.469 26.737 5.698 1.00 37.82 N ATOM 216 CA THR 16 -0.736 27.135 6.426 1.00 39.38 C ATOM 217 C THR 16 -1.485 28.427 5.985 1.00 40.90 C ATOM 218 O THR 16 -2.649 28.605 6.368 1.00 42.73 O ATOM 219 CB THR 16 -0.384 27.189 7.922 1.00 39.77 C ATOM 220 OG1 THR 16 0.689 28.094 8.121 1.00 39.07 O ATOM 221 CG2 THR 16 0.024 25.813 8.417 1.00 48.16 C ATOM 229 N GLY 17 -0.861 29.332 5.225 1.00 41.49 N ATOM 230 CA GLY 17 -1.554 30.545 4.781 1.00 43.85 C ATOM 231 C GLY 17 -2.203 31.363 5.901 1.00 37.54 C ATOM 232 O GLY 17 -1.590 31.716 6.919 1.00 31.43 O ATOM 236 N GLN 18 -3.507 31.602 5.707 1.00 40.82 N ATOM 237 CA GLN 18 -4.368 32.367 6.611 1.00 37.05 C ATOM 238 C GLN 18 -4.449 31.745 7.985 1.00 35.86 C ATOM 239 O GLN 18 -4.697 32.446 8.976 1.00 35.86 O ATOM 240 CB GLN 18 -5.796 32.464 6.049 1.00 44.43 C ATOM 241 CG GLN 18 -6.002 33.318 4.780 1.00 47.48 C ATOM 242 CD GLN 18 -5.834 34.827 4.986 1.00 44.73 C ATOM 243 OE1 GLN 18 -6.129 35.375 6.064 1.00 44.33 O ATOM 244 NE2 GLN 18 -5.383 35.502 3.931 1.00 49.22 N ATOM 253 N ASN 19 -4.282 30.428 8.065 1.00 37.12 N ATOM 254 CA ASN 19 -4.385 29.787 9.355 1.00 36.85 C ATOM 255 C ASN 19 -3.223 30.233 10.219 1.00 35.23 C ATOM 256 O ASN 19 -3.354 30.341 11.438 1.00 37.19 O ATOM 257 CB ASN 19 -4.404 28.285 9.213 1.00 42.01 C ATOM 258 CG ASN 19 -5.696 27.779 8.652 1.00 45.03 C ATOM 259 OD1 ASN 19 -6.755 28.414 8.769 1.00 49.22 O ATOM 260 ND2 ASN 19 -5.628 26.634 8.026 1.00 50.20 N ATOM 267 N TRP 20 -2.073 30.504 9.596 1.00 32.55 N ATOM 268 CA TRP 20 -0.937 30.928 10.374 1.00 32.71 C ATOM 269 C TRP 20 -1.222 32.277 10.958 1.00 28.49 C ATOM 270 O TRP 20 -1.011 32.500 12.139 1.00 29.49 O ATOM 271 CB TRP 20 0.337 31.026 9.560 1.00 32.08 C ATOM 272 CG TRP 20 1.454 31.394 10.422 1.00 33.92 C ATOM 273 CD1 TRP 20 2.202 30.539 11.168 1.00 40.57 C ATOM 274 CD2 TRP 20 1.960 32.694 10.681 1.00 30.02 C ATOM 275 NE1 TRP 20 3.121 31.228 11.892 1.00 40.57 N ATOM 276 CE2 TRP 20 2.985 32.546 11.621 1.00 34.45 C ATOM 277 CE3 TRP 20 1.629 33.959 10.217 1.00 26.01 C ATOM 278 CZ2 TRP 20 3.649 33.607 12.115 1.00 34.33 C ATOM 279 CZ3 TRP 20 2.307 35.011 10.705 1.00 25.48 C ATOM 280 CH2 TRP 20 3.287 34.834 11.644 1.00 29.66 C ATOM 291 N ALA 21 -1.716 33.191 10.114 1.00 26.35 N ATOM 292 CA ALA 21 -1.985 34.550 10.594 1.00 26.39 C ATOM 293 C ALA 21 -3.020 34.560 11.702 1.00 30.90 C ATOM 294 O ALA 21 -2.903 35.336 12.662 1.00 31.68 O ATOM 295 CB ALA 21 -2.474 35.422 9.466 1.00 28.21 C ATOM 301 N SER 22 -4.035 33.705 11.605 1.00 34.10 N ATOM 302 CA SER 22 -5.047 33.686 12.646 1.00 40.16 C ATOM 303 C SER 22 -4.444 33.196 13.962 1.00 37.61 C ATOM 304 O SER 22 -4.648 33.803 15.027 1.00 39.53 O ATOM 305 CB SER 22 -6.194 32.789 12.225 1.00 44.14 C ATOM 306 OG SER 22 -6.859 33.311 11.101 1.00 47.93 O ATOM 312 N LEU 23 -3.663 32.115 13.889 1.00 34.86 N ATOM 313 CA LEU 23 -3.055 31.575 15.089 1.00 35.61 C ATOM 314 C LEU 23 -2.028 32.531 15.652 1.00 32.81 C ATOM 315 O LEU 23 -1.997 32.771 16.859 1.00 35.67 O ATOM 316 CB LEU 23 -2.378 30.241 14.760 1.00 38.11 C ATOM 317 CG LEU 23 -3.324 29.087 14.418 1.00 43.28 C ATOM 318 CD1 LEU 23 -2.511 27.916 13.902 1.00 50.20 C ATOM 319 CD2 LEU 23 -4.111 28.699 15.666 1.00 49.10 C ATOM 331 N ALA 24 -1.230 33.127 14.766 1.00 29.93 N ATOM 332 CA ALA 24 -0.187 34.051 15.147 1.00 29.97 C ATOM 333 C ALA 24 -0.756 35.271 15.829 1.00 27.89 C ATOM 334 O ALA 24 -0.215 35.733 16.823 1.00 29.10 O ATOM 335 CB ALA 24 0.608 34.461 13.930 1.00 29.36 C ATOM 341 N ALA 25 -1.879 35.789 15.350 1.00 28.73 N ATOM 342 CA ALA 25 -2.431 36.953 16.009 1.00 32.55 C ATOM 343 C ALA 25 -2.745 36.629 17.465 1.00 35.86 C ATOM 344 O ALA 25 -2.478 37.416 18.380 1.00 38.40 O ATOM 345 CB ALA 25 -3.668 37.449 15.295 1.00 38.77 C ATOM 351 N ASN 26 -3.248 35.419 17.705 1.00 35.73 N ATOM 352 CA ASN 26 -3.550 35.048 19.075 1.00 41.75 C ATOM 353 C ASN 26 -2.271 34.774 19.880 1.00 42.19 C ATOM 354 O ASN 26 -2.095 35.307 20.979 1.00 45.33 O ATOM 355 CB ASN 26 -4.470 33.847 19.081 1.00 46.06 C ATOM 356 CG ASN 26 -5.872 34.202 18.650 1.00 44.63 C ATOM 357 OD1 ASN 26 -6.307 35.359 18.742 1.00 48.62 O ATOM 358 ND2 ASN 26 -6.588 33.221 18.168 1.00 49.71 N ATOM 365 N GLU 27 -1.339 34.012 19.305 1.00 39.45 N ATOM 366 CA GLU 27 -0.093 33.639 19.977 1.00 41.24 C ATOM 367 C GLU 27 0.778 34.844 20.317 1.00 39.85 C ATOM 368 O GLU 27 1.390 34.918 21.383 1.00 45.43 O ATOM 369 CB GLU 27 0.722 32.673 19.120 1.00 43.09 C ATOM 370 CG GLU 27 0.143 31.273 18.966 1.00 46.59 C ATOM 371 CD GLU 27 0.948 30.397 18.027 1.00 45.03 C ATOM 372 OE1 GLU 27 1.846 30.905 17.386 1.00 47.25 O ATOM 373 OE2 GLU 27 0.670 29.226 17.958 1.00 49.46 O ATOM 380 N LEU 28 0.795 35.814 19.416 1.00 35.92 N ATOM 381 CA LEU 28 1.599 37.010 19.545 1.00 39.07 C ATOM 382 C LEU 28 0.884 38.073 20.384 1.00 38.99 C ATOM 383 O LEU 28 1.427 39.150 20.621 1.00 47.36 O ATOM 384 CB LEU 28 1.899 37.566 18.148 1.00 36.71 C ATOM 385 CG LEU 28 2.717 36.640 17.214 1.00 37.47 C ATOM 386 CD1 LEU 28 2.821 37.269 15.807 1.00 32.98 C ATOM 387 CD2 LEU 28 4.058 36.405 17.809 1.00 46.70 C ATOM 399 N ARG 29 -0.345 37.761 20.840 1.00 36.58 N ATOM 400 CA ARG 29 -1.166 38.650 21.644 1.00 42.73 C ATOM 401 C ARG 29 -1.366 40.016 20.992 1.00 43.66 C ATOM 402 O ARG 29 -1.200 41.050 21.645 1.00 48.98 O ATOM 403 CB ARG 29 -0.563 38.822 23.034 1.00 46.06 C ATOM 404 CG ARG 29 -0.912 37.714 24.046 1.00 47.14 C ATOM 405 CD ARG 29 -0.206 36.407 23.769 1.00 43.75 C ATOM 406 NE ARG 29 -0.464 35.433 24.832 1.00 47.36 N ATOM 407 CZ ARG 29 -0.049 34.139 24.854 1.00 46.38 C ATOM 408 NH1 ARG 29 0.660 33.619 23.870 1.00 48.16 N ATOM 409 NH2 ARG 29 -0.365 33.381 25.893 1.00 49.96 N ATOM 423 N VAL 30 -1.716 40.024 19.702 1.00 40.82 N ATOM 424 CA VAL 30 -1.879 41.280 18.979 1.00 39.92 C ATOM 425 C VAL 30 -3.243 41.527 18.360 1.00 40.73 C ATOM 426 O VAL 30 -3.813 40.675 17.677 1.00 43.37 O ATOM 427 CB VAL 30 -0.804 41.340 17.889 1.00 35.23 C ATOM 428 CG1 VAL 30 -0.877 40.120 17.052 1.00 30.85 C ATOM 429 CG2 VAL 30 -1.013 42.552 16.989 1.00 34.45 C ATOM 439 N THR 31 -3.732 42.746 18.565 1.00 42.01 N ATOM 440 CA THR 31 -4.985 43.182 17.977 1.00 40.82 C ATOM 441 C THR 31 -4.682 44.286 16.990 1.00 39.45 C ATOM 442 O THR 31 -4.034 45.276 17.315 1.00 45.13 O ATOM 443 CB THR 31 -5.969 43.700 19.041 1.00 45.54 C ATOM 444 OG1 THR 31 -6.278 42.648 19.967 1.00 50.33 O ATOM 445 CG2 THR 31 -7.250 44.181 18.377 1.00 49.71 C ATOM 453 N GLU 32 -5.150 44.079 15.777 1.00 39.61 N ATOM 454 CA GLU 32 -4.985 44.971 14.643 1.00 38.84 C ATOM 455 C GLU 32 -6.074 44.641 13.646 1.00 42.10 C ATOM 456 O GLU 32 -6.667 43.571 13.687 1.00 47.14 O ATOM 457 CB GLU 32 -3.564 44.844 14.042 1.00 33.87 C ATOM 458 CG GLU 32 -3.247 45.773 12.807 1.00 33.69 C ATOM 459 CD GLU 32 -3.426 47.271 13.023 1.00 41.07 C ATOM 460 OE1 GLU 32 -4.565 47.702 13.024 1.00 45.64 O ATOM 461 OE2 GLU 32 -2.448 47.987 13.102 1.00 45.85 O ATOM 468 N ARG 33 -6.366 45.574 12.763 1.00 41.32 N ATOM 469 CA ARG 33 -7.363 45.330 11.744 1.00 42.01 C ATOM 470 C ARG 33 -6.992 44.047 10.964 1.00 36.12 C ATOM 471 O ARG 33 -5.843 43.906 10.536 1.00 31.33 O ATOM 472 CB ARG 33 -7.443 46.523 10.827 1.00 40.73 C ATOM 473 CG ARG 33 -8.046 47.785 11.436 1.00 45.74 C ATOM 474 CD ARG 33 -8.035 48.924 10.471 1.00 42.28 C ATOM 475 NE ARG 33 -8.609 50.142 11.036 1.00 45.54 N ATOM 476 CZ ARG 33 -9.912 50.491 10.954 1.00 44.93 C ATOM 477 NH1 ARG 33 -10.759 49.722 10.311 1.00 50.58 N ATOM 478 NH2 ARG 33 -10.333 51.610 11.521 1.00 49.10 N ATOM 492 N PRO 34 -7.959 43.125 10.730 1.00 38.55 N ATOM 493 CA PRO 34 -7.792 41.861 10.017 1.00 41.24 C ATOM 494 C PRO 34 -7.067 41.984 8.695 1.00 39.30 C ATOM 495 O PRO 34 -6.327 41.084 8.316 1.00 39.45 O ATOM 496 CB PRO 34 -9.245 41.426 9.805 1.00 49.10 C ATOM 497 CG PRO 34 -9.970 41.991 11.003 1.00 49.71 C ATOM 498 CD PRO 34 -9.330 43.329 11.248 1.00 47.03 C ATOM 506 N PHE 35 -7.241 43.102 7.965 1.00 41.41 N ATOM 507 CA PHE 35 -6.493 43.207 6.721 1.00 41.24 C ATOM 508 C PHE 35 -5.005 43.079 6.954 1.00 33.87 C ATOM 509 O PHE 35 -4.313 42.413 6.185 1.00 35.48 O ATOM 510 CB PHE 35 -6.720 44.499 5.946 1.00 41.66 C ATOM 511 CG PHE 35 -5.737 44.529 4.831 1.00 38.92 C ATOM 512 CD1 PHE 35 -5.989 43.898 3.639 1.00 46.92 C ATOM 513 CD2 PHE 35 -4.490 45.099 5.022 1.00 32.34 C ATOM 514 CE1 PHE 35 -5.024 43.867 2.661 1.00 47.25 C ATOM 515 CE2 PHE 35 -3.542 45.042 4.060 1.00 32.55 C ATOM 516 CZ PHE 35 -3.795 44.441 2.891 1.00 39.45 C ATOM 526 N TRP 36 -4.492 43.800 7.954 1.00 28.94 N ATOM 527 CA TRP 36 -3.061 43.811 8.195 1.00 24.95 C ATOM 528 C TRP 36 -2.642 42.441 8.656 1.00 25.20 C ATOM 529 O TRP 36 -1.642 41.905 8.193 1.00 25.10 O ATOM 530 CB TRP 36 -2.717 44.822 9.275 1.00 25.07 C ATOM 531 CG TRP 36 -2.713 46.276 8.867 1.00 28.13 C ATOM 532 CD1 TRP 36 -1.620 47.083 8.848 1.00 31.78 C ATOM 533 CD2 TRP 36 -3.818 47.092 8.422 1.00 30.34 C ATOM 534 NE1 TRP 36 -1.965 48.332 8.438 1.00 35.99 N ATOM 535 CE2 TRP 36 -3.303 48.355 8.168 1.00 34.27 C ATOM 536 CE3 TRP 36 -5.163 46.863 8.227 1.00 31.73 C ATOM 537 CZ2 TRP 36 -4.092 49.394 7.722 1.00 35.23 C ATOM 538 CZ3 TRP 36 -5.968 47.907 7.759 1.00 35.61 C ATOM 539 CH2 TRP 36 -5.441 49.132 7.516 1.00 34.10 C ATOM 550 N ILE 37 -3.450 41.844 9.512 1.00 27.40 N ATOM 551 CA ILE 37 -3.067 40.538 10.032 1.00 28.73 C ATOM 552 C ILE 37 -2.971 39.518 8.887 1.00 29.32 C ATOM 553 O ILE 37 -2.021 38.752 8.801 1.00 27.17 O ATOM 554 CB ILE 37 -4.038 40.099 11.136 1.00 34.56 C ATOM 555 CG1 ILE 37 -3.814 41.035 12.354 1.00 33.14 C ATOM 556 CG2 ILE 37 -3.839 38.642 11.489 1.00 36.78 C ATOM 557 CD1 ILE 37 -4.845 40.930 13.439 1.00 41.24 C ATOM 569 N SER 38 -3.951 39.533 7.976 1.00 33.53 N ATOM 570 CA SER 38 -3.876 38.659 6.826 1.00 36.71 C ATOM 571 C SER 38 -2.734 39.026 5.851 1.00 38.40 C ATOM 572 O SER 38 -2.052 38.157 5.343 1.00 38.92 O ATOM 573 CB SER 38 -5.198 38.650 6.074 1.00 46.49 C ATOM 574 OG SER 38 -6.209 38.012 6.813 1.00 46.27 O ATOM 580 N SER 39 -2.486 40.298 5.596 1.00 38.62 N ATOM 581 CA SER 39 -1.404 40.562 4.634 1.00 41.84 C ATOM 582 C SER 39 -0.041 40.206 5.250 1.00 34.51 C ATOM 583 O SER 39 0.905 39.838 4.532 1.00 35.36 O ATOM 584 CB SER 39 -1.428 42.003 4.150 1.00 40.41 C ATOM 585 OG SER 39 -0.924 42.902 5.087 1.00 32.08 O ATOM 591 N PHE 40 0.012 40.156 6.588 1.00 29.06 N ATOM 592 CA PHE 40 1.243 39.864 7.322 1.00 24.88 C ATOM 593 C PHE 40 1.628 38.385 7.277 1.00 24.64 C ATOM 594 O PHE 40 2.645 37.981 7.872 1.00 22.34 O ATOM 595 CB PHE 40 1.151 40.310 8.780 1.00 21.52 C ATOM 596 CG PHE 40 1.141 41.822 9.004 1.00 20.83 C ATOM 597 CD1 PHE 40 1.554 42.722 8.019 1.00 21.69 C ATOM 598 CD2 PHE 40 0.722 42.339 10.213 1.00 21.07 C ATOM 599 CE1 PHE 40 1.536 44.078 8.256 1.00 23.49 C ATOM 600 CE2 PHE 40 0.706 43.683 10.455 1.00 23.99 C ATOM 601 CZ PHE 40 1.120 44.563 9.469 1.00 25.71 C ATOM 611 N ILE 41 0.857 37.599 6.515 1.00 27.97 N ATOM 612 CA ILE 41 1.145 36.197 6.257 1.00 27.70 C ATOM 613 C ILE 41 2.496 36.060 5.574 1.00 26.92 C ATOM 614 O ILE 41 3.198 35.101 5.810 1.00 25.88 O ATOM 615 CB ILE 41 0.073 35.562 5.353 1.00 33.08 C ATOM 616 CG1 ILE 41 -1.172 35.445 6.087 1.00 32.03 C ATOM 617 CG2 ILE 41 0.488 34.248 4.900 1.00 34.27 C ATOM 618 CD1 ILE 41 -2.326 35.128 5.227 1.00 38.03 C ATOM 630 N GLY 42 2.858 36.951 4.657 1.00 28.85 N ATOM 631 CA GLY 42 4.142 36.697 4.044 1.00 28.05 C ATOM 632 C GLY 42 4.891 37.922 3.573 1.00 28.57 C ATOM 633 O GLY 42 4.412 38.703 2.763 1.00 28.77 O ATOM 637 N ARG 43 6.155 37.984 3.989 1.00 31.88 N ATOM 638 CA ARG 43 7.073 39.068 3.661 1.00 34.62 C ATOM 639 C ARG 43 7.278 39.217 2.160 1.00 36.58 C ATOM 640 O ARG 43 7.404 40.327 1.652 1.00 35.42 O ATOM 641 CB ARG 43 8.404 38.832 4.369 1.00 41.75 C ATOM 642 CG ARG 43 8.327 39.055 5.892 1.00 37.89 C ATOM 643 CD ARG 43 9.544 38.689 6.635 1.00 44.63 C ATOM 644 NE ARG 43 9.350 38.937 8.071 1.00 42.55 N ATOM 645 CZ ARG 43 9.625 40.094 8.690 1.00 42.10 C ATOM 646 NH1 ARG 43 10.163 41.108 8.038 1.00 45.43 N ATOM 647 NH2 ARG 43 9.345 40.188 9.967 1.00 45.54 N ATOM 661 N SER 44 7.279 38.095 1.458 1.00 39.07 N ATOM 662 CA SER 44 7.477 38.079 0.016 1.00 42.55 C ATOM 663 C SER 44 6.195 38.269 -0.806 1.00 39.22 C ATOM 664 O SER 44 6.254 38.297 -2.037 1.00 47.14 O ATOM 665 CB SER 44 8.152 36.776 -0.390 1.00 49.10 C ATOM 666 OG SER 44 7.309 35.682 -0.136 1.00 46.49 O ATOM 672 N LYS 45 5.032 38.316 -0.160 1.00 35.29 N ATOM 673 CA LYS 45 3.775 38.411 -0.905 1.00 41.32 C ATOM 674 C LYS 45 3.442 39.854 -1.256 1.00 38.92 C ATOM 675 O LYS 45 3.643 40.757 -0.452 1.00 33.81 O ATOM 676 CB LYS 45 2.636 37.794 -0.089 1.00 44.33 C ATOM 677 CG LYS 45 2.776 36.275 0.154 1.00 43.00 C ATOM 678 CD LYS 45 1.605 35.711 0.978 1.00 44.73 C ATOM 679 CE LYS 45 1.778 34.212 1.252 1.00 42.55 C ATOM 680 NZ LYS 45 1.735 33.400 -0.011 1.00 48.62 N TER END