####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS368_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS368_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 3 - 40 4.87 8.07 LCS_AVERAGE: 84.35 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 19 - 37 1.85 9.11 LCS_AVERAGE: 34.56 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 19 - 31 0.96 8.17 LCS_AVERAGE: 20.87 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 37 3 3 3 6 6 8 11 12 13 15 17 17 20 25 26 28 31 33 38 38 LCS_GDT V 3 V 3 3 7 38 3 3 4 6 8 9 12 16 18 21 25 29 30 35 36 36 37 38 38 39 LCS_GDT Q 4 Q 4 5 7 38 3 4 5 6 8 9 13 16 23 25 27 29 33 35 36 36 37 38 38 39 LCS_GDT G 5 G 5 5 7 38 2 4 5 8 12 15 19 23 26 27 31 33 33 35 36 36 37 38 38 39 LCS_GDT P 6 P 6 5 13 38 3 4 5 5 8 12 18 23 26 27 31 33 33 35 36 36 37 38 38 39 LCS_GDT W 7 W 7 12 17 38 3 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT V 8 V 8 12 17 38 6 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT G 9 G 9 12 17 38 6 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT S 10 S 10 12 17 38 6 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT S 11 S 11 12 17 38 6 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT Y 12 Y 12 12 17 38 6 11 12 13 16 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT V 13 V 13 12 17 38 6 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 14 A 14 12 17 38 6 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT E 15 E 15 12 17 38 3 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT T 16 T 16 12 17 38 6 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT G 17 G 17 12 17 38 6 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT Q 18 Q 18 12 17 38 3 3 12 13 14 17 19 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT N 19 N 19 13 19 38 6 12 12 14 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT W 20 W 20 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 21 A 21 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT S 22 S 22 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT L 23 L 23 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 24 A 24 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 25 A 25 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT N 26 N 26 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT E 27 E 27 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT L 28 L 28 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT R 29 R 29 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT V 30 V 30 13 19 38 5 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT T 31 T 31 13 19 38 3 7 11 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT E 32 E 32 6 19 38 4 6 6 10 13 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT R 33 R 33 6 19 38 4 7 11 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT P 34 P 34 6 19 38 4 7 8 13 17 18 20 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT F 35 F 35 6 19 38 4 6 11 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT W 36 W 36 6 19 38 4 6 11 14 17 18 20 24 26 27 30 33 33 35 36 36 37 38 38 39 LCS_GDT I 37 I 37 6 19 38 4 6 10 15 16 18 21 24 26 27 30 33 33 35 36 36 37 38 38 39 LCS_GDT S 38 S 38 5 9 38 4 4 6 7 10 14 20 22 24 27 29 30 31 34 36 36 37 38 38 39 LCS_GDT S 39 S 39 5 9 38 4 4 6 7 9 12 17 21 23 27 29 30 30 31 32 36 37 38 38 39 LCS_GDT F 40 F 40 5 9 38 4 4 6 7 9 12 14 20 23 27 29 30 30 31 32 34 37 38 38 39 LCS_GDT I 41 I 41 5 9 36 4 4 6 7 9 12 14 18 20 24 27 28 30 30 31 31 32 32 33 39 LCS_GDT G 42 G 42 4 9 34 3 4 4 6 9 10 12 13 17 18 22 24 27 28 31 31 32 32 33 33 LCS_GDT R 43 R 43 4 9 34 3 4 6 7 9 10 12 13 17 18 20 24 25 27 30 31 32 32 33 33 LCS_GDT S 44 S 44 3 9 33 3 3 4 4 9 10 12 13 15 15 17 20 23 26 27 29 32 32 33 33 LCS_GDT K 45 K 45 3 3 15 2 3 3 3 3 7 7 8 10 12 13 14 15 19 20 21 22 25 27 27 LCS_AVERAGE LCS_A: 46.59 ( 20.87 34.56 84.35 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 GDT PERCENT_AT 18.18 27.27 27.27 34.09 38.64 40.91 47.73 54.55 59.09 65.91 70.45 75.00 75.00 79.55 81.82 81.82 84.09 86.36 86.36 88.64 GDT RMS_LOCAL 0.28 0.55 0.55 1.34 1.46 1.60 2.32 2.62 2.85 3.40 3.64 3.83 3.83 4.19 4.41 4.41 4.66 4.87 4.87 5.26 GDT RMS_ALL_AT 7.98 8.02 8.02 8.97 9.34 9.16 7.99 8.20 8.19 8.69 8.61 8.47 8.47 8.46 8.31 8.31 8.18 8.07 8.07 7.93 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 15.759 0 0.640 0.604 17.359 0.000 0.000 - LGA V 3 V 3 11.008 0 0.123 1.071 12.151 0.000 0.000 8.337 LGA Q 4 Q 4 12.387 0 0.674 1.014 15.542 0.000 0.000 15.542 LGA G 5 G 5 10.498 0 0.035 0.035 10.989 0.000 0.000 - LGA P 6 P 6 9.050 0 0.086 0.424 12.278 0.000 0.000 11.735 LGA W 7 W 7 9.921 0 0.433 1.225 21.131 0.000 0.000 21.131 LGA V 8 V 8 8.645 0 0.123 0.176 9.685 0.000 0.000 8.608 LGA G 9 G 9 7.837 0 0.062 0.062 8.494 0.000 0.000 - LGA S 10 S 10 7.652 0 0.096 0.592 9.271 0.000 0.000 9.026 LGA S 11 S 11 4.762 0 0.015 0.682 6.031 14.545 10.000 4.692 LGA Y 12 Y 12 2.880 0 0.121 1.100 7.917 31.818 12.727 7.917 LGA V 13 V 13 3.425 0 0.062 1.007 7.520 13.182 10.390 7.520 LGA A 14 A 14 4.371 0 0.023 0.023 5.041 6.818 6.545 - LGA E 15 E 15 3.170 0 0.060 1.125 5.310 15.455 14.545 3.521 LGA T 16 T 16 4.092 0 0.107 1.149 6.013 5.909 12.208 2.233 LGA G 17 G 17 6.226 0 0.713 0.713 6.226 0.000 0.000 - LGA Q 18 Q 18 5.468 0 0.022 1.313 12.253 16.364 7.273 12.107 LGA N 19 N 19 1.737 0 0.658 1.526 7.770 47.727 24.545 7.770 LGA W 20 W 20 1.497 0 0.075 1.027 6.882 54.545 39.870 6.080 LGA A 21 A 21 2.425 0 0.042 0.047 3.014 38.182 34.182 - LGA S 22 S 22 2.250 0 0.105 0.142 2.400 41.364 40.303 2.375 LGA L 23 L 23 0.900 0 0.077 0.106 1.752 69.545 72.045 1.181 LGA A 24 A 24 1.586 0 0.029 0.029 1.997 54.545 53.818 - LGA A 25 A 25 2.242 0 0.021 0.025 2.502 38.182 36.000 - LGA N 26 N 26 1.600 0 0.061 0.091 2.298 58.182 52.955 2.298 LGA E 27 E 27 1.135 0 0.071 0.990 3.405 65.455 52.525 3.405 LGA L 28 L 28 1.152 0 0.073 0.141 1.621 65.455 63.636 1.621 LGA R 29 R 29 1.162 0 0.080 1.403 8.324 65.455 38.182 8.324 LGA V 30 V 30 1.325 0 0.252 1.158 3.602 65.909 51.948 3.602 LGA T 31 T 31 1.403 0 0.696 0.676 4.408 52.273 34.026 4.403 LGA E 32 E 32 3.844 0 0.589 1.259 11.030 25.909 11.515 11.030 LGA R 33 R 33 2.512 0 0.063 1.344 12.068 22.727 9.256 12.068 LGA P 34 P 34 3.667 0 0.086 0.393 6.696 13.636 8.052 6.696 LGA F 35 F 35 2.508 0 0.099 1.230 3.433 32.727 29.752 3.058 LGA W 36 W 36 3.753 0 0.652 1.274 14.435 14.545 4.156 14.162 LGA I 37 I 37 3.017 0 0.071 0.951 5.714 12.727 14.545 2.981 LGA S 38 S 38 6.766 0 0.119 0.653 9.018 0.455 0.303 8.142 LGA S 39 S 39 7.411 0 0.181 0.719 10.556 0.000 0.000 6.814 LGA F 40 F 40 7.844 0 0.119 1.085 11.079 0.000 0.000 9.535 LGA I 41 I 41 11.838 0 0.565 0.573 15.008 0.000 0.000 11.955 LGA G 42 G 42 16.497 0 0.150 0.150 19.214 0.000 0.000 - LGA R 43 R 43 16.486 0 0.650 1.300 17.098 0.000 0.000 16.601 LGA S 44 S 44 18.591 0 0.714 0.811 21.644 0.000 0.000 17.316 LGA K 45 K 45 22.457 0 0.149 0.350 25.050 0.000 0.000 20.950 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.589 7.767 8.625 21.446 16.939 9.247 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 24 2.62 49.432 46.887 0.882 LGA_LOCAL RMSD: 2.620 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.203 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.589 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.578785 * X + -0.656967 * Y + 0.483118 * Z + 1.058260 Y_new = -0.814328 * X + -0.434139 * Y + 0.385219 * Z + 27.514317 Z_new = -0.043336 * X + -0.616375 * Y + -0.786259 * Z + -15.048965 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.952891 0.043349 -2.476725 [DEG: -54.5966 2.4837 -141.9059 ] ZXZ: 2.243925 2.475528 -3.071401 [DEG: 128.5674 141.8373 -175.9783 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS368_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS368_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 24 2.62 46.887 7.59 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS368_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT 3a1y_A, 4aor_D ATOM 20 N ALA 2 -2.402 45.511 12.338 1.00 3.89 N ATOM 21 CA ALA 2 -2.718 44.780 13.558 1.00 3.89 C ATOM 22 C ALA 2 -1.440 44.476 14.320 1.00 3.89 C ATOM 23 O ALA 2 -1.427 44.388 15.552 1.00 3.89 O ATOM 24 CB ALA 2 -3.404 43.477 13.238 1.00 5.83 C ATOM 30 N VAL 3 -0.374 44.309 13.533 1.00 3.89 N ATOM 31 CA VAL 3 0.976 43.960 13.921 1.00 3.89 C ATOM 32 C VAL 3 1.924 45.152 13.745 1.00 3.89 C ATOM 33 O VAL 3 1.588 46.152 13.090 1.00 3.89 O ATOM 34 CB VAL 3 1.500 42.842 13.000 1.00 5.83 C ATOM 35 CG1 VAL 3 0.696 41.581 13.085 1.00 5.83 C ATOM 36 CG2 VAL 3 1.423 43.340 11.574 1.00 5.83 C ATOM 46 N GLN 4 3.134 45.031 14.308 1.00 3.89 N ATOM 47 CA GLN 4 4.172 46.067 14.197 1.00 3.89 C ATOM 48 C GLN 4 4.543 46.332 12.731 1.00 3.68 C ATOM 49 O GLN 4 5.040 47.401 12.380 1.00 3.89 O ATOM 50 CB GLN 4 5.413 45.645 14.977 1.00 5.83 C ATOM 51 CG GLN 4 5.186 45.478 16.471 1.00 5.83 C ATOM 52 CD GLN 4 4.576 44.102 16.825 1.00 5.83 C ATOM 53 OE1 GLN 4 3.772 43.543 16.075 1.00 5.83 O ATOM 54 NE2 GLN 4 4.967 43.557 17.972 1.00 5.83 N ATOM 63 N GLY 5 4.300 45.338 11.885 1.00 3.21 N ATOM 64 CA GLY 5 4.527 45.426 10.456 1.00 2.75 C ATOM 65 C GLY 5 4.423 44.052 9.778 1.00 1.96 C ATOM 66 O GLY 5 4.436 43.013 10.449 1.00 2.06 O ATOM 70 N PRO 6 4.373 44.007 8.435 1.00 1.39 N ATOM 71 CA PRO 6 4.326 42.803 7.617 1.00 0.97 C ATOM 72 C PRO 6 5.436 41.827 7.996 1.00 0.94 C ATOM 73 O PRO 6 5.263 40.615 7.858 1.00 1.04 O ATOM 74 CB PRO 6 4.560 43.366 6.213 1.00 1.46 C ATOM 75 CG PRO 6 3.957 44.753 6.276 1.00 1.46 C ATOM 76 CD PRO 6 4.313 45.263 7.655 1.00 1.46 C ATOM 84 N TRP 7 6.573 42.351 8.469 1.00 1.03 N ATOM 85 CA TRP 7 7.710 41.545 8.899 1.00 1.12 C ATOM 86 C TRP 7 7.379 40.626 10.079 1.00 0.99 C ATOM 87 O TRP 7 7.978 39.553 10.239 1.00 1.02 O ATOM 88 CB TRP 7 8.879 42.461 9.271 1.00 1.68 C ATOM 89 CG TRP 7 8.613 43.361 10.455 1.00 1.68 C ATOM 90 CD1 TRP 7 8.137 44.635 10.407 1.00 1.68 C ATOM 91 CD2 TRP 7 8.820 43.065 11.857 1.00 1.68 C ATOM 92 NE1 TRP 7 8.042 45.157 11.677 1.00 1.68 N ATOM 93 CE2 TRP 7 8.456 44.207 12.575 1.00 1.68 C ATOM 94 CE3 TRP 7 9.283 41.938 12.552 1.00 1.68 C ATOM 95 CZ2 TRP 7 8.539 44.261 13.956 1.00 1.68 C ATOM 96 CZ3 TRP 7 9.359 41.989 13.936 1.00 1.68 C ATOM 97 CH2 TRP 7 8.996 43.126 14.620 1.00 1.68 C ATOM 108 N VAL 8 6.393 41.029 10.887 1.00 0.94 N ATOM 109 CA VAL 8 5.980 40.256 12.046 1.00 0.88 C ATOM 110 C VAL 8 5.281 39.052 11.509 1.00 0.85 C ATOM 111 O VAL 8 5.538 37.904 11.889 1.00 0.90 O ATOM 112 CB VAL 8 4.957 41.033 12.888 1.00 1.32 C ATOM 113 CG1 VAL 8 4.439 40.175 14.012 1.00 1.32 C ATOM 114 CG2 VAL 8 5.552 42.274 13.393 1.00 1.32 C ATOM 124 N GLY 9 4.394 39.359 10.579 1.00 0.84 N ATOM 125 CA GLY 9 3.581 38.377 9.903 1.00 0.92 C ATOM 126 C GLY 9 4.417 37.374 9.140 1.00 0.91 C ATOM 127 O GLY 9 4.246 36.161 9.284 1.00 0.88 O ATOM 131 N SER 10 5.341 37.901 8.338 1.00 1.01 N ATOM 132 CA SER 10 6.214 37.105 7.500 1.00 1.12 C ATOM 133 C SER 10 7.054 36.162 8.348 1.00 1.05 C ATOM 134 O SER 10 7.210 34.987 8.013 1.00 1.09 O ATOM 135 CB SER 10 7.132 38.029 6.723 1.00 1.68 C ATOM 136 OG SER 10 6.400 38.844 5.841 1.00 1.68 O ATOM 142 N SER 11 7.564 36.653 9.479 1.00 1.01 N ATOM 143 CA SER 11 8.356 35.804 10.342 1.00 1.01 C ATOM 144 C SER 11 7.487 34.690 10.927 1.00 0.88 C ATOM 145 O SER 11 7.879 33.516 10.954 1.00 0.93 O ATOM 146 CB SER 11 8.937 36.632 11.473 1.00 1.52 C ATOM 147 OG SER 11 9.823 37.608 10.987 1.00 1.52 O ATOM 153 N TYR 12 6.270 35.045 11.350 1.00 0.77 N ATOM 154 CA TYR 12 5.368 34.082 11.957 1.00 0.69 C ATOM 155 C TYR 12 5.107 32.917 11.032 1.00 0.69 C ATOM 156 O TYR 12 5.319 31.756 11.403 1.00 0.70 O ATOM 157 CB TYR 12 4.035 34.747 12.302 1.00 1.03 C ATOM 158 CG TYR 12 3.023 33.824 12.923 1.00 1.03 C ATOM 159 CD1 TYR 12 3.127 33.506 14.258 1.00 1.03 C ATOM 160 CD2 TYR 12 1.994 33.297 12.170 1.00 1.03 C ATOM 161 CE1 TYR 12 2.220 32.686 14.843 1.00 1.03 C ATOM 162 CE2 TYR 12 1.084 32.461 12.769 1.00 1.03 C ATOM 163 CZ TYR 12 1.195 32.154 14.103 1.00 1.03 C ATOM 164 OH TYR 12 0.282 31.305 14.705 1.00 1.03 O ATOM 174 N VAL 13 4.676 33.237 9.819 1.00 0.81 N ATOM 175 CA VAL 13 4.335 32.235 8.826 1.00 0.92 C ATOM 176 C VAL 13 5.547 31.452 8.337 1.00 1.02 C ATOM 177 O VAL 13 5.451 30.247 8.092 1.00 1.06 O ATOM 178 CB VAL 13 3.571 32.913 7.683 1.00 1.38 C ATOM 179 CG1 VAL 13 4.437 33.774 6.926 1.00 1.38 C ATOM 180 CG2 VAL 13 2.936 31.880 6.779 1.00 1.38 C ATOM 190 N ALA 14 6.721 32.093 8.276 1.00 1.09 N ATOM 191 CA ALA 14 7.927 31.400 7.845 1.00 1.25 C ATOM 192 C ALA 14 8.227 30.202 8.741 1.00 1.21 C ATOM 193 O ALA 14 8.682 29.162 8.254 1.00 1.35 O ATOM 194 CB ALA 14 9.107 32.358 7.855 1.00 1.88 C ATOM 200 N GLU 15 7.959 30.333 10.043 1.00 1.07 N ATOM 201 CA GLU 15 8.190 29.223 10.967 1.00 1.11 C ATOM 202 C GLU 15 6.924 28.383 11.231 1.00 1.06 C ATOM 203 O GLU 15 7.019 27.195 11.548 1.00 1.17 O ATOM 204 CB GLU 15 8.755 29.731 12.299 1.00 1.67 C ATOM 205 CG GLU 15 10.124 30.404 12.198 1.00 1.67 C ATOM 206 CD GLU 15 10.683 30.846 13.545 1.00 1.67 C ATOM 207 OE1 GLU 15 9.991 30.724 14.532 1.00 1.67 O ATOM 208 OE2 GLU 15 11.807 31.293 13.580 1.00 1.67 O ATOM 215 N THR 16 5.749 29.008 11.111 1.00 0.93 N ATOM 216 CA THR 16 4.462 28.381 11.418 1.00 0.94 C ATOM 217 C THR 16 3.837 27.567 10.289 1.00 0.99 C ATOM 218 O THR 16 3.235 26.522 10.539 1.00 1.07 O ATOM 219 CB THR 16 3.432 29.441 11.839 1.00 1.41 C ATOM 220 OG1 THR 16 3.931 30.149 12.967 1.00 1.41 O ATOM 221 CG2 THR 16 2.107 28.784 12.191 1.00 1.41 C ATOM 229 N GLY 17 3.914 28.066 9.058 1.00 1.02 N ATOM 230 CA GLY 17 3.202 27.437 7.966 1.00 1.16 C ATOM 231 C GLY 17 1.767 27.933 8.008 1.00 1.19 C ATOM 232 O GLY 17 1.507 29.011 8.554 1.00 1.25 O ATOM 236 N GLN 18 0.845 27.173 7.420 1.00 1.43 N ATOM 237 CA GLN 18 -0.540 27.614 7.332 1.00 1.74 C ATOM 238 C GLN 18 -1.144 27.765 8.723 1.00 1.55 C ATOM 239 O GLN 18 -0.860 26.986 9.635 1.00 2.07 O ATOM 240 CB GLN 18 -1.359 26.637 6.484 1.00 2.61 C ATOM 241 CG GLN 18 -0.971 26.644 5.011 1.00 2.61 C ATOM 242 CD GLN 18 -1.749 25.637 4.150 1.00 2.61 C ATOM 243 OE1 GLN 18 -1.340 25.366 3.003 1.00 2.61 O ATOM 244 NE2 GLN 18 -2.841 25.092 4.674 1.00 2.61 N ATOM 253 N ASN 19 -1.962 28.801 8.871 1.00 1.25 N ATOM 254 CA ASN 19 -2.610 29.124 10.132 1.00 1.15 C ATOM 255 C ASN 19 -3.849 29.954 9.873 1.00 1.39 C ATOM 256 O ASN 19 -3.912 30.644 8.862 1.00 1.75 O ATOM 257 CB ASN 19 -1.634 29.918 10.961 1.00 1.72 C ATOM 258 CG ASN 19 -1.308 31.233 10.257 1.00 1.72 C ATOM 259 OD1 ASN 19 -1.993 32.237 10.457 1.00 1.72 O ATOM 260 ND2 ASN 19 -0.289 31.242 9.420 1.00 1.72 N ATOM 267 N TRP 20 -4.801 29.980 10.794 1.00 1.74 N ATOM 268 CA TRP 20 -5.928 30.887 10.603 1.00 2.03 C ATOM 269 C TRP 20 -5.526 32.258 11.102 1.00 1.56 C ATOM 270 O TRP 20 -4.796 32.371 12.092 1.00 1.26 O ATOM 271 CB TRP 20 -7.174 30.431 11.328 1.00 3.04 C ATOM 272 CG TRP 20 -7.736 29.191 10.784 1.00 3.04 C ATOM 273 CD1 TRP 20 -7.608 28.711 9.514 1.00 3.04 C ATOM 274 CD2 TRP 20 -8.520 28.230 11.503 1.00 3.04 C ATOM 275 NE1 TRP 20 -8.266 27.519 9.398 1.00 3.04 N ATOM 276 CE2 TRP 20 -8.830 27.207 10.609 1.00 3.04 C ATOM 277 CE3 TRP 20 -8.976 28.152 12.823 1.00 3.04 C ATOM 278 CZ2 TRP 20 -9.580 26.111 10.988 1.00 3.04 C ATOM 279 CZ3 TRP 20 -9.722 27.052 13.206 1.00 3.04 C ATOM 280 CH2 TRP 20 -10.017 26.057 12.311 1.00 3.04 C ATOM 291 N ALA 21 -6.071 33.293 10.487 1.00 1.59 N ATOM 292 CA ALA 21 -5.732 34.658 10.855 1.00 1.27 C ATOM 293 C ALA 21 -6.001 34.976 12.321 1.00 1.08 C ATOM 294 O ALA 21 -5.194 35.646 12.976 1.00 0.92 O ATOM 295 CB ALA 21 -6.526 35.602 9.976 1.00 1.91 C ATOM 301 N SER 22 -7.098 34.455 12.866 1.00 1.34 N ATOM 302 CA SER 22 -7.421 34.734 14.259 1.00 1.41 C ATOM 303 C SER 22 -6.507 33.958 15.220 1.00 1.25 C ATOM 304 O SER 22 -6.341 34.321 16.389 1.00 1.45 O ATOM 305 CB SER 22 -8.884 34.410 14.515 1.00 2.11 C ATOM 306 OG SER 22 -9.130 33.030 14.442 1.00 2.11 O ATOM 312 N LEU 23 -5.860 32.904 14.729 1.00 1.11 N ATOM 313 CA LEU 23 -4.989 32.139 15.598 1.00 1.02 C ATOM 314 C LEU 23 -3.691 32.892 15.675 1.00 0.91 C ATOM 315 O LEU 23 -3.118 33.056 16.758 1.00 0.88 O ATOM 316 CB LEU 23 -4.762 30.725 15.049 1.00 1.53 C ATOM 317 CG LEU 23 -5.996 29.814 15.020 1.00 1.53 C ATOM 318 CD1 LEU 23 -5.649 28.516 14.285 1.00 1.53 C ATOM 319 CD2 LEU 23 -6.438 29.521 16.432 1.00 1.53 C ATOM 331 N ALA 24 -3.258 33.403 14.519 1.00 1.02 N ATOM 332 CA ALA 24 -2.035 34.174 14.455 1.00 1.07 C ATOM 333 C ALA 24 -2.163 35.415 15.308 1.00 0.88 C ATOM 334 O ALA 24 -1.251 35.769 16.048 1.00 0.84 O ATOM 335 CB ALA 24 -1.725 34.562 13.030 1.00 1.60 C ATOM 341 N ALA 25 -3.335 36.066 15.264 1.00 0.87 N ATOM 342 CA ALA 25 -3.490 37.263 16.072 1.00 0.84 C ATOM 343 C ALA 25 -3.328 36.951 17.541 1.00 0.82 C ATOM 344 O ALA 25 -2.664 37.683 18.290 1.00 0.92 O ATOM 345 CB ALA 25 -4.845 37.903 15.857 1.00 1.26 C ATOM 351 N ASN 26 -3.856 35.817 17.978 1.00 0.83 N ATOM 352 CA ASN 26 -3.714 35.510 19.381 1.00 0.96 C ATOM 353 C ASN 26 -2.267 35.149 19.727 1.00 0.97 C ATOM 354 O ASN 26 -1.699 35.718 20.662 1.00 1.16 O ATOM 355 CB ASN 26 -4.675 34.399 19.758 1.00 1.44 C ATOM 356 CG ASN 26 -6.108 34.881 19.806 1.00 1.44 C ATOM 357 OD1 ASN 26 -6.376 36.086 19.916 1.00 1.44 O ATOM 358 ND2 ASN 26 -7.033 33.961 19.722 1.00 1.44 N ATOM 365 N GLU 27 -1.642 34.265 18.949 1.00 0.90 N ATOM 366 CA GLU 27 -0.278 33.842 19.266 1.00 1.04 C ATOM 367 C GLU 27 0.724 35.006 19.238 1.00 1.07 C ATOM 368 O GLU 27 1.613 35.100 20.087 1.00 1.26 O ATOM 369 CB GLU 27 0.179 32.701 18.350 1.00 1.56 C ATOM 370 CG GLU 27 1.544 32.116 18.734 1.00 1.56 C ATOM 371 CD GLU 27 1.916 30.857 17.985 1.00 1.56 C ATOM 372 OE1 GLU 27 1.160 30.433 17.134 1.00 1.56 O ATOM 373 OE2 GLU 27 2.959 30.324 18.261 1.00 1.56 O ATOM 380 N LEU 28 0.550 35.918 18.285 1.00 0.92 N ATOM 381 CA LEU 28 1.419 37.078 18.132 1.00 0.94 C ATOM 382 C LEU 28 1.113 38.214 19.103 1.00 1.04 C ATOM 383 O LEU 28 1.861 39.189 19.160 1.00 1.17 O ATOM 384 CB LEU 28 1.305 37.619 16.704 1.00 1.41 C ATOM 385 CG LEU 28 1.857 36.755 15.611 1.00 1.41 C ATOM 386 CD1 LEU 28 1.475 37.347 14.242 1.00 1.41 C ATOM 387 CD2 LEU 28 3.359 36.719 15.795 1.00 1.41 C ATOM 399 N ARG 29 0.024 38.094 19.877 1.00 1.06 N ATOM 400 CA ARG 29 -0.418 39.143 20.786 1.00 1.26 C ATOM 401 C ARG 29 -0.672 40.466 20.045 1.00 1.29 C ATOM 402 O ARG 29 -0.237 41.534 20.480 1.00 1.49 O ATOM 403 CB ARG 29 0.598 39.342 21.913 1.00 1.89 C ATOM 404 CG ARG 29 0.481 38.342 23.066 1.00 1.89 C ATOM 405 CD ARG 29 0.960 36.955 22.687 1.00 1.89 C ATOM 406 NE ARG 29 0.964 36.058 23.847 1.00 1.89 N ATOM 407 CZ ARG 29 1.261 34.728 23.843 1.00 1.89 C ATOM 408 NH1 ARG 29 1.586 34.089 22.736 1.00 1.89 N ATOM 409 NH2 ARG 29 1.220 34.058 24.982 1.00 1.89 N ATOM 423 N VAL 30 -1.395 40.372 18.918 1.00 1.13 N ATOM 424 CA VAL 30 -1.724 41.511 18.054 1.00 1.21 C ATOM 425 C VAL 30 -3.232 41.605 17.825 1.00 1.17 C ATOM 426 O VAL 30 -3.989 40.772 18.333 1.00 1.31 O ATOM 427 CB VAL 30 -0.956 41.398 16.731 1.00 1.81 C ATOM 428 CG1 VAL 30 0.552 41.428 17.022 1.00 1.81 C ATOM 429 CG2 VAL 30 -1.357 40.166 16.063 1.00 1.81 C ATOM 439 N THR 31 -3.698 42.660 17.155 1.00 1.42 N ATOM 440 CA THR 31 -5.143 42.792 16.960 1.00 1.56 C ATOM 441 C THR 31 -5.556 41.960 15.759 1.00 1.55 C ATOM 442 O THR 31 -4.730 41.289 15.145 1.00 2.11 O ATOM 443 CB THR 31 -5.625 44.231 16.687 1.00 2.34 C ATOM 444 OG1 THR 31 -5.287 44.608 15.362 1.00 2.34 O ATOM 445 CG2 THR 31 -4.927 45.181 17.640 1.00 2.34 C ATOM 453 N GLU 32 -6.839 41.983 15.452 1.00 1.51 N ATOM 454 CA GLU 32 -7.354 41.275 14.295 1.00 1.92 C ATOM 455 C GLU 32 -7.550 42.183 13.068 1.00 1.73 C ATOM 456 O GLU 32 -8.241 41.803 12.121 1.00 2.25 O ATOM 457 CB GLU 32 -8.668 40.582 14.636 1.00 2.88 C ATOM 458 CG GLU 32 -8.543 39.475 15.665 1.00 2.88 C ATOM 459 CD GLU 32 -9.861 38.810 15.931 1.00 2.88 C ATOM 460 OE1 GLU 32 -10.842 39.505 16.105 1.00 2.88 O ATOM 461 OE2 GLU 32 -9.905 37.603 15.942 1.00 2.88 O ATOM 468 N ARG 33 -7.059 43.430 13.113 1.00 1.55 N ATOM 469 CA ARG 33 -7.274 44.282 11.946 1.00 1.59 C ATOM 470 C ARG 33 -6.291 45.452 11.788 1.00 1.85 C ATOM 471 O ARG 33 -5.999 46.155 12.760 1.00 2.26 O ATOM 472 CB ARG 33 -8.691 44.851 11.979 1.00 2.39 C ATOM 473 CG ARG 33 -9.123 45.606 10.723 1.00 2.39 C ATOM 474 CD ARG 33 -10.570 45.964 10.762 1.00 2.39 C ATOM 475 NE ARG 33 -10.863 46.963 11.781 1.00 2.39 N ATOM 476 CZ ARG 33 -12.104 47.366 12.126 1.00 2.39 C ATOM 477 NH1 ARG 33 -13.155 46.847 11.530 1.00 2.39 N ATOM 478 NH2 ARG 33 -12.266 48.283 13.066 1.00 2.39 N ATOM 492 N PRO 34 -5.758 45.664 10.564 1.00 2.30 N ATOM 493 CA PRO 34 -5.754 44.800 9.388 1.00 2.71 C ATOM 494 C PRO 34 -4.806 43.627 9.618 1.00 2.28 C ATOM 495 O PRO 34 -3.758 43.777 10.253 1.00 3.08 O ATOM 496 CB PRO 34 -5.254 45.739 8.284 1.00 4.06 C ATOM 497 CG PRO 34 -4.462 46.784 9.004 1.00 4.06 C ATOM 498 CD PRO 34 -5.170 46.968 10.340 1.00 4.06 C ATOM 506 N PHE 35 -5.117 42.472 9.039 1.00 1.50 N ATOM 507 CA PHE 35 -4.214 41.344 9.226 1.00 1.77 C ATOM 508 C PHE 35 -2.974 41.415 8.367 1.00 1.42 C ATOM 509 O PHE 35 -3.032 41.688 7.165 1.00 1.39 O ATOM 510 CB PHE 35 -4.888 40.007 8.929 1.00 2.66 C ATOM 511 CG PHE 35 -5.832 39.518 9.974 1.00 2.66 C ATOM 512 CD1 PHE 35 -7.194 39.578 9.795 1.00 2.66 C ATOM 513 CD2 PHE 35 -5.344 38.967 11.147 1.00 2.66 C ATOM 514 CE1 PHE 35 -8.054 39.088 10.763 1.00 2.66 C ATOM 515 CE2 PHE 35 -6.215 38.483 12.099 1.00 2.66 C ATOM 516 CZ PHE 35 -7.563 38.539 11.906 1.00 2.66 C ATOM 526 N TRP 36 -1.866 41.006 8.967 1.00 1.50 N ATOM 527 CA TRP 36 -0.571 40.885 8.304 1.00 1.57 C ATOM 528 C TRP 36 -0.618 39.993 7.080 1.00 1.40 C ATOM 529 O TRP 36 0.182 40.143 6.159 1.00 1.48 O ATOM 530 CB TRP 36 0.445 40.349 9.280 1.00 2.35 C ATOM 531 CG TRP 36 0.111 38.964 9.825 1.00 2.35 C ATOM 532 CD1 TRP 36 -0.557 38.708 10.988 1.00 2.35 C ATOM 533 CD2 TRP 36 0.396 37.665 9.242 1.00 2.35 C ATOM 534 NE1 TRP 36 -0.689 37.363 11.171 1.00 2.35 N ATOM 535 CE2 TRP 36 -0.116 36.708 10.115 1.00 2.35 C ATOM 536 CE3 TRP 36 1.030 37.246 8.058 1.00 2.35 C ATOM 537 CZ2 TRP 36 -0.020 35.358 9.850 1.00 2.35 C ATOM 538 CZ3 TRP 36 1.124 35.895 7.794 1.00 2.35 C ATOM 539 CH2 TRP 36 0.605 34.977 8.672 1.00 2.35 C ATOM 550 N ILE 37 -1.587 39.095 7.071 1.00 1.31 N ATOM 551 CA ILE 37 -1.824 38.134 6.022 1.00 1.27 C ATOM 552 C ILE 37 -2.085 38.815 4.699 1.00 1.15 C ATOM 553 O ILE 37 -1.634 38.337 3.661 1.00 1.12 O ATOM 554 CB ILE 37 -2.979 37.220 6.407 1.00 1.91 C ATOM 555 CG1 ILE 37 -2.520 36.387 7.541 1.00 1.91 C ATOM 556 CG2 ILE 37 -3.376 36.368 5.251 1.00 1.91 C ATOM 557 CD1 ILE 37 -3.546 35.648 8.230 1.00 1.91 C ATOM 569 N SER 38 -2.844 39.911 4.700 1.00 1.17 N ATOM 570 CA SER 38 -3.123 40.569 3.434 1.00 1.20 C ATOM 571 C SER 38 -1.828 41.083 2.809 1.00 1.13 C ATOM 572 O SER 38 -1.613 40.943 1.597 1.00 1.23 O ATOM 573 CB SER 38 -4.091 41.720 3.639 1.00 1.80 C ATOM 574 OG SER 38 -5.355 41.258 4.041 1.00 1.80 O ATOM 580 N SER 39 -0.950 41.659 3.644 1.00 1.11 N ATOM 581 CA SER 39 0.325 42.189 3.172 1.00 1.24 C ATOM 582 C SER 39 1.266 41.060 2.768 1.00 1.16 C ATOM 583 O SER 39 1.907 41.124 1.712 1.00 1.36 O ATOM 584 CB SER 39 0.973 43.048 4.245 1.00 1.86 C ATOM 585 OG SER 39 0.224 44.208 4.479 1.00 1.86 O ATOM 591 N PHE 40 1.305 40.006 3.586 1.00 1.00 N ATOM 592 CA PHE 40 2.145 38.858 3.312 1.00 0.96 C ATOM 593 C PHE 40 1.805 38.254 1.975 1.00 0.95 C ATOM 594 O PHE 40 2.687 38.044 1.137 1.00 0.98 O ATOM 595 CB PHE 40 2.041 37.811 4.423 1.00 1.44 C ATOM 596 CG PHE 40 2.769 36.557 4.101 1.00 1.44 C ATOM 597 CD1 PHE 40 4.149 36.495 4.177 1.00 1.44 C ATOM 598 CD2 PHE 40 2.067 35.424 3.715 1.00 1.44 C ATOM 599 CE1 PHE 40 4.823 35.329 3.856 1.00 1.44 C ATOM 600 CE2 PHE 40 2.728 34.257 3.400 1.00 1.44 C ATOM 601 CZ PHE 40 4.111 34.208 3.465 1.00 1.44 C ATOM 611 N ILE 41 0.521 38.008 1.743 1.00 1.00 N ATOM 612 CA ILE 41 0.105 37.465 0.463 1.00 1.09 C ATOM 613 C ILE 41 0.444 38.424 -0.665 1.00 1.17 C ATOM 614 O ILE 41 1.093 38.033 -1.633 1.00 1.23 O ATOM 615 CB ILE 41 -1.396 37.163 0.464 1.00 1.64 C ATOM 616 CG1 ILE 41 -1.694 36.015 1.410 1.00 1.64 C ATOM 617 CG2 ILE 41 -1.895 36.855 -0.930 1.00 1.64 C ATOM 618 CD1 ILE 41 -3.160 35.851 1.666 1.00 1.64 C ATOM 630 N GLY 42 0.133 39.709 -0.508 1.00 1.22 N ATOM 631 CA GLY 42 0.442 40.660 -1.569 1.00 1.39 C ATOM 632 C GLY 42 1.925 40.640 -1.967 1.00 1.47 C ATOM 633 O GLY 42 2.257 40.855 -3.139 1.00 1.73 O ATOM 637 N ARG 43 2.815 40.391 -1.000 1.00 1.38 N ATOM 638 CA ARG 43 4.247 40.329 -1.265 1.00 1.53 C ATOM 639 C ARG 43 4.787 38.946 -1.690 1.00 1.53 C ATOM 640 O ARG 43 5.751 38.882 -2.461 1.00 1.62 O ATOM 641 CB ARG 43 5.010 40.795 -0.036 1.00 2.29 C ATOM 642 CG ARG 43 4.840 42.276 0.282 1.00 2.29 C ATOM 643 CD ARG 43 5.601 42.691 1.491 1.00 2.29 C ATOM 644 NE ARG 43 5.435 44.115 1.766 1.00 2.29 N ATOM 645 CZ ARG 43 6.084 44.799 2.732 1.00 2.29 C ATOM 646 NH1 ARG 43 6.951 44.189 3.507 1.00 2.29 N ATOM 647 NH2 ARG 43 5.849 46.091 2.893 1.00 2.29 N ATOM 661 N SER 44 4.200 37.845 -1.194 1.00 1.51 N ATOM 662 CA SER 44 4.750 36.506 -1.449 1.00 1.57 C ATOM 663 C SER 44 3.891 35.529 -2.269 1.00 1.20 C ATOM 664 O SER 44 4.405 34.511 -2.739 1.00 1.33 O ATOM 665 CB SER 44 5.058 35.847 -0.123 1.00 2.35 C ATOM 666 OG SER 44 3.888 35.664 0.609 1.00 2.35 O ATOM 672 N LYS 45 2.596 35.784 -2.401 1.00 1.12 N ATOM 673 CA LYS 45 1.713 34.861 -3.104 1.00 1.56 C ATOM 674 C LYS 45 0.719 35.600 -3.987 1.00 1.60 C ATOM 675 O LYS 45 -0.116 36.359 -3.505 1.00 2.04 O ATOM 676 CB LYS 45 0.966 33.998 -2.086 1.00 2.34 C ATOM 677 CG LYS 45 0.038 32.968 -2.687 1.00 2.34 C ATOM 678 CD LYS 45 -0.619 32.117 -1.606 1.00 2.34 C ATOM 679 CE LYS 45 -1.572 31.096 -2.219 1.00 2.34 C ATOM 680 NZ LYS 45 -2.212 30.236 -1.181 1.00 2.34 N TER 3519 END