####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS366_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS366_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 8 - 42 4.98 7.23 LCS_AVERAGE: 74.59 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 19 - 36 2.00 8.32 LONGEST_CONTINUOUS_SEGMENT: 18 20 - 37 1.93 8.48 LCS_AVERAGE: 28.77 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 0.96 9.29 LCS_AVERAGE: 18.49 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 12 0 3 3 3 4 7 8 12 16 20 24 27 29 31 33 34 36 37 39 40 LCS_GDT V 3 V 3 5 5 12 3 5 5 5 6 6 6 12 16 19 21 24 27 29 32 34 34 37 39 40 LCS_GDT Q 4 Q 4 5 5 15 3 5 5 5 6 6 10 12 16 19 21 24 27 29 32 34 35 37 39 40 LCS_GDT G 5 G 5 5 5 33 3 5 5 5 6 6 10 15 17 20 24 28 29 31 33 34 36 37 39 40 LCS_GDT P 6 P 6 5 5 33 3 5 5 5 6 6 10 12 17 20 23 28 29 31 33 34 36 37 39 40 LCS_GDT W 7 W 7 5 5 33 3 5 5 5 6 6 7 10 15 19 22 25 28 30 33 34 36 37 39 40 LCS_GDT V 8 V 8 3 11 35 3 7 14 16 16 18 19 21 25 26 26 28 29 31 33 34 36 37 39 40 LCS_GDT G 9 G 9 6 11 35 3 5 6 9 10 18 19 21 24 26 26 28 29 31 33 34 36 37 39 40 LCS_GDT S 10 S 10 8 11 35 3 5 8 9 15 17 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT S 11 S 11 8 11 35 3 5 8 9 10 12 14 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT Y 12 Y 12 8 11 35 3 6 8 9 10 12 14 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT V 13 V 13 8 11 35 3 6 8 9 10 16 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT A 14 A 14 8 11 35 4 6 8 9 10 12 14 17 21 24 26 28 30 32 34 34 36 37 39 40 LCS_GDT E 15 E 15 8 11 35 4 6 8 9 10 12 14 14 15 16 23 26 30 31 34 34 35 36 39 40 LCS_GDT T 16 T 16 8 11 35 4 6 8 9 10 12 14 14 15 21 25 28 30 32 34 34 36 37 39 40 LCS_GDT G 17 G 17 8 11 35 4 6 8 9 10 12 14 14 15 17 18 23 28 30 34 34 36 37 39 40 LCS_GDT Q 18 Q 18 4 11 35 3 3 4 8 10 12 14 14 21 24 26 28 30 32 34 34 36 37 39 40 LCS_GDT N 19 N 19 4 18 35 3 3 4 4 10 17 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT W 20 W 20 13 18 35 7 10 13 16 16 18 19 21 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT A 21 A 21 13 18 35 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT S 22 S 22 13 18 35 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT L 23 L 23 13 18 35 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT A 24 A 24 13 18 35 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT A 25 A 25 13 18 35 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT N 26 N 26 13 18 35 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT E 27 E 27 13 18 35 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT L 28 L 28 13 18 35 6 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT R 29 R 29 13 18 35 6 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT V 30 V 30 13 18 35 6 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT T 31 T 31 13 18 35 3 9 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT E 32 E 32 13 18 35 3 9 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT R 33 R 33 11 18 35 3 8 12 15 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT P 34 P 34 5 18 35 6 9 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT F 35 F 35 3 18 35 3 3 3 5 8 15 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT W 36 W 36 6 18 35 5 8 13 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT I 37 I 37 7 18 35 3 6 7 9 12 14 19 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT S 38 S 38 7 9 35 4 6 7 8 8 9 14 18 22 24 27 28 30 32 34 34 36 37 39 40 LCS_GDT S 39 S 39 7 9 35 4 6 7 8 8 10 14 19 22 24 27 28 30 32 34 34 36 37 39 40 LCS_GDT F 40 F 40 7 9 35 4 6 7 8 9 13 20 22 25 26 27 28 30 32 34 34 36 37 39 40 LCS_GDT I 41 I 41 7 9 35 4 6 7 8 8 11 14 18 22 24 27 28 30 32 34 34 36 37 39 40 LCS_GDT G 42 G 42 7 9 35 3 6 7 8 8 9 12 17 20 24 26 28 30 32 34 34 35 36 38 39 LCS_GDT R 43 R 43 7 9 34 0 6 7 8 8 10 11 14 20 22 25 28 30 32 34 34 35 36 38 39 LCS_GDT S 44 S 44 3 9 33 1 3 4 5 6 9 10 11 12 15 19 21 28 29 29 31 33 33 35 35 LCS_GDT K 45 K 45 3 3 14 0 3 3 4 4 5 5 8 10 11 13 15 17 18 20 20 24 25 26 31 LCS_AVERAGE LCS_A: 40.62 ( 18.49 28.77 74.59 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 14 16 16 18 20 22 25 26 27 28 30 32 34 34 36 37 39 40 GDT PERCENT_AT 15.91 22.73 31.82 36.36 36.36 40.91 45.45 50.00 56.82 59.09 61.36 63.64 68.18 72.73 77.27 77.27 81.82 84.09 88.64 90.91 GDT RMS_LOCAL 0.20 0.59 0.98 1.18 1.18 1.46 2.47 2.65 2.87 2.96 3.48 3.58 4.10 4.48 4.80 4.68 5.07 5.22 5.54 5.75 GDT RMS_ALL_AT 9.20 8.85 8.86 8.76 8.76 8.78 7.47 7.47 7.62 7.71 7.38 7.44 7.40 7.34 7.39 7.86 7.19 7.49 7.33 7.27 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 9.031 0 0.031 0.047 10.905 0.000 0.000 - LGA V 3 V 3 11.166 0 0.582 0.629 12.694 0.000 0.000 12.694 LGA Q 4 Q 4 11.637 0 0.085 0.904 18.466 0.000 0.000 18.189 LGA G 5 G 5 8.799 0 0.135 0.135 10.392 0.000 0.000 - LGA P 6 P 6 8.217 0 0.687 0.615 9.672 0.000 0.000 9.239 LGA W 7 W 7 9.683 0 0.520 1.240 20.130 0.000 0.000 19.739 LGA V 8 V 8 4.351 0 0.602 1.449 6.365 10.909 6.234 6.365 LGA G 9 G 9 5.438 0 0.440 0.440 5.438 7.727 7.727 - LGA S 10 S 10 2.797 0 0.036 0.135 3.445 22.727 24.242 2.637 LGA S 11 S 11 4.056 0 0.117 0.597 5.415 8.636 6.667 4.122 LGA Y 12 Y 12 4.538 0 0.054 1.266 12.810 3.182 1.212 12.810 LGA V 13 V 13 4.226 0 0.164 1.207 8.335 5.909 3.636 5.819 LGA A 14 A 14 8.765 0 0.084 0.087 12.526 0.000 0.000 - LGA E 15 E 15 11.904 0 0.044 1.149 15.012 0.000 0.000 15.012 LGA T 16 T 16 10.029 0 0.041 0.153 10.854 0.000 0.000 5.841 LGA G 17 G 17 10.894 0 0.596 0.596 10.894 0.000 0.000 - LGA Q 18 Q 18 8.363 0 0.661 0.643 15.446 0.000 0.000 12.160 LGA N 19 N 19 3.106 0 0.039 0.990 6.346 20.455 13.864 6.346 LGA W 20 W 20 4.104 0 0.585 1.302 15.226 20.000 5.714 15.226 LGA A 21 A 21 2.207 0 0.026 0.033 2.929 45.455 46.545 - LGA S 22 S 22 1.724 0 0.034 0.635 2.469 54.545 51.212 1.729 LGA L 23 L 23 1.899 0 0.058 0.145 4.377 58.182 36.818 4.377 LGA A 24 A 24 2.033 0 0.017 0.022 2.515 44.545 41.091 - LGA A 25 A 25 1.595 0 0.030 0.029 2.145 47.727 51.273 - LGA N 26 N 26 1.407 0 0.054 0.107 1.734 58.182 60.000 1.703 LGA E 27 E 27 1.672 0 0.068 0.869 2.849 45.455 46.061 2.849 LGA L 28 L 28 2.328 0 0.039 0.059 2.759 35.455 35.455 2.408 LGA R 29 R 29 2.321 0 0.086 1.406 10.120 38.182 19.008 10.120 LGA V 30 V 30 2.203 0 0.096 1.134 3.292 55.909 42.338 3.292 LGA T 31 T 31 0.893 0 0.655 0.970 4.498 56.364 44.156 2.675 LGA E 32 E 32 1.268 0 0.095 1.435 4.196 65.909 41.818 3.850 LGA R 33 R 33 3.096 0 0.023 0.977 14.810 15.909 5.785 14.810 LGA P 34 P 34 2.259 0 0.608 0.614 5.008 25.909 25.195 3.290 LGA F 35 F 35 3.692 0 0.604 1.391 10.111 34.545 12.562 9.956 LGA W 36 W 36 0.884 0 0.598 1.036 5.825 69.545 30.390 5.476 LGA I 37 I 37 3.859 0 0.106 0.953 8.291 9.091 4.545 8.291 LGA S 38 S 38 7.619 0 0.105 0.655 10.532 0.000 0.000 10.532 LGA S 39 S 39 7.306 0 0.098 0.096 8.395 0.000 0.000 6.220 LGA F 40 F 40 4.225 0 0.157 1.337 8.057 1.818 5.785 7.812 LGA I 41 I 41 8.146 0 0.609 0.565 11.602 0.000 0.000 10.971 LGA G 42 G 42 10.805 0 0.579 0.579 13.168 0.000 0.000 - LGA R 43 R 43 11.307 0 0.615 1.135 13.052 0.000 0.000 10.795 LGA S 44 S 44 16.923 0 0.679 0.829 20.755 0.000 0.000 17.084 LGA K 45 K 45 20.413 0 0.048 0.824 22.427 0.000 0.000 19.668 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.028 7.114 8.426 19.597 15.212 8.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 22 2.65 46.591 43.287 0.800 LGA_LOCAL RMSD: 2.651 Number of atoms: 22 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.468 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.028 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.542257 * X + -0.821400 * Y + 0.176804 * Z + 50.370384 Y_new = 0.659900 * X + -0.286097 * Y + 0.694752 * Z + -33.600849 Z_new = -0.520087 * X + 0.493407 * Y + 0.697180 * Z + -32.409927 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.258645 0.546953 0.615887 [DEG: 129.4108 31.3381 35.2877 ] ZXZ: 2.892398 0.799341 -0.811717 [DEG: 165.7222 45.7988 -46.5079 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS366_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS366_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 22 2.65 43.287 7.03 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS366_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 1557 N ALA 2 4.844 40.690 15.716 1.00 1.89 N ATOM 1558 CA ALA 2 3.833 41.660 16.137 1.00 1.89 C ATOM 1559 C ALA 2 4.510 42.901 16.746 1.00 1.89 C ATOM 1560 O ALA 2 5.574 42.773 17.361 1.00 1.89 O ATOM 1561 CB ALA 2 2.879 41.027 17.122 1.00 1.89 C ATOM 1562 N VAL 3 3.920 44.099 16.589 1.00 1.72 N ATOM 1563 CA VAL 3 2.606 44.331 15.985 1.00 1.72 C ATOM 1564 C VAL 3 2.626 44.517 14.476 1.00 1.72 C ATOM 1565 O VAL 3 1.897 43.817 13.765 1.00 1.72 O ATOM 1566 CB VAL 3 1.941 45.548 16.633 1.00 1.72 C ATOM 1567 CG1 VAL 3 0.631 45.837 15.942 1.00 1.72 C ATOM 1568 CG2 VAL 3 1.731 45.259 18.108 1.00 1.72 C ATOM 1569 N GLN 4 3.448 45.432 13.966 1.00 1.55 N ATOM 1570 CA GLN 4 3.439 45.635 12.524 1.00 1.55 C ATOM 1571 C GLN 4 4.416 44.701 11.851 1.00 1.55 C ATOM 1572 O GLN 4 5.586 44.614 12.240 1.00 1.55 O ATOM 1573 CB GLN 4 3.759 47.087 12.161 1.00 1.55 C ATOM 1574 CG GLN 4 2.772 48.113 12.690 1.00 1.55 C ATOM 1575 CD GLN 4 1.349 47.949 12.132 1.00 1.55 C ATOM 1576 NE2 GLN 4 0.389 47.902 13.044 1.00 1.55 N ATOM 1577 OE1 GLN 4 1.130 47.902 10.915 1.00 1.55 O ATOM 1578 N GLY 5 3.910 44.003 10.858 1.00 1.37 N ATOM 1579 CA GLY 5 4.618 43.006 10.079 1.00 1.37 C ATOM 1580 C GLY 5 4.962 43.509 8.697 1.00 1.37 C ATOM 1581 O GLY 5 5.060 44.719 8.502 1.00 1.37 O ATOM 1582 N PRO 6 5.028 42.593 7.700 1.00 1.28 N ATOM 1583 CA PRO 6 4.724 41.174 7.717 1.00 1.28 C ATOM 1584 C PRO 6 5.524 40.444 8.743 1.00 1.28 C ATOM 1585 O PRO 6 6.613 40.862 9.126 1.00 1.28 O ATOM 1586 CB PRO 6 5.012 40.746 6.283 1.00 1.28 C ATOM 1587 CG PRO 6 4.815 41.993 5.490 1.00 1.28 C ATOM 1588 CD PRO 6 5.346 43.079 6.399 1.00 1.28 C ATOM 1589 N TRP 7 4.920 39.411 9.276 1.00 1.32 N ATOM 1590 CA TRP 7 5.529 38.735 10.382 1.00 1.32 C ATOM 1591 C TRP 7 6.549 37.682 9.935 1.00 1.32 C ATOM 1592 O TRP 7 7.730 37.741 10.305 1.00 1.32 O ATOM 1593 CB TRP 7 4.392 38.131 11.217 1.00 1.32 C ATOM 1594 CG TRP 7 3.456 39.184 11.937 1.00 1.32 C ATOM 1595 CD1 TRP 7 3.753 40.483 12.191 1.00 1.32 C ATOM 1596 CD2 TRP 7 2.084 39.003 12.462 1.00 1.32 C ATOM 1597 CE2 TRP 7 1.682 40.232 12.982 1.00 1.32 C ATOM 1598 CE3 TRP 7 1.188 37.927 12.523 1.00 1.32 C ATOM 1599 NE1 TRP 7 2.684 41.107 12.810 1.00 1.32 N ATOM 1600 CZ2 TRP 7 0.433 40.420 13.557 1.00 1.32 C ATOM 1601 CZ3 TRP 7 -0.064 38.120 13.093 1.00 1.32 C ATOM 1602 CH2 TRP 7 -0.428 39.325 13.594 1.00 1.32 C ATOM 1603 N VAL 8 6.135 36.770 9.062 1.00 1.48 N ATOM 1604 CA VAL 8 7.005 35.670 8.650 1.00 1.48 C ATOM 1605 C VAL 8 7.100 35.465 7.155 1.00 1.48 C ATOM 1606 O VAL 8 6.453 36.162 6.368 1.00 1.48 O ATOM 1607 CB VAL 8 6.554 34.363 9.272 1.00 1.48 C ATOM 1608 CG1 VAL 8 6.601 34.472 10.790 1.00 1.48 C ATOM 1609 CG2 VAL 8 5.175 34.025 8.752 1.00 1.48 C ATOM 1610 N GLY 9 7.976 34.538 6.763 1.00 1.85 N ATOM 1611 CA GLY 9 8.090 34.132 5.377 1.00 1.85 C ATOM 1612 C GLY 9 7.457 32.755 5.131 1.00 1.85 C ATOM 1613 O GLY 9 6.726 32.200 5.979 1.00 1.85 O ATOM 1614 N SER 10 7.834 32.180 3.987 1.00 2.31 N ATOM 1615 CA SER 10 7.315 30.918 3.477 1.00 2.31 C ATOM 1616 C SER 10 7.547 29.708 4.373 1.00 2.31 C ATOM 1617 O SER 10 6.791 28.736 4.301 1.00 2.31 O ATOM 1618 CB SER 10 7.925 30.643 2.119 1.00 2.31 C ATOM 1619 OG SER 10 9.309 30.456 2.221 1.00 2.31 O ATOM 1620 N SER 11 8.497 29.801 5.303 1.00 2.78 N ATOM 1621 CA SER 11 8.814 28.686 6.194 1.00 2.78 C ATOM 1622 C SER 11 7.607 28.237 7.028 1.00 2.78 C ATOM 1623 O SER 11 7.578 27.102 7.500 1.00 2.78 O ATOM 1624 CB SER 11 9.953 29.068 7.119 1.00 2.78 C ATOM 1625 OG SER 11 9.564 30.079 7.995 1.00 2.78 O ATOM 1626 N TYR 12 6.607 29.111 7.197 1.00 3.40 N ATOM 1627 CA TYR 12 5.403 28.712 7.922 1.00 3.40 C ATOM 1628 C TYR 12 4.184 28.808 7.012 1.00 3.40 C ATOM 1629 O TYR 12 3.281 27.941 7.008 1.00 3.40 O ATOM 1630 CB TYR 12 5.159 29.622 9.126 1.00 3.40 C ATOM 1631 CG TYR 12 6.247 29.636 10.141 1.00 3.40 C ATOM 1632 CD1 TYR 12 7.038 30.740 10.225 1.00 3.40 C ATOM 1633 CD2 TYR 12 6.450 28.567 10.995 1.00 3.40 C ATOM 1634 CE1 TYR 12 8.048 30.815 11.151 1.00 3.40 C ATOM 1635 CE2 TYR 12 7.464 28.627 11.936 1.00 3.40 C ATOM 1636 CZ TYR 12 8.263 29.750 12.014 1.00 3.40 C ATOM 1637 OH TYR 12 9.271 29.818 12.946 1.00 3.40 O ATOM 1638 N VAL 13 4.146 29.843 6.187 1.00 3.85 N ATOM 1639 CA VAL 13 2.899 30.069 5.518 1.00 3.85 C ATOM 1640 C VAL 13 2.739 29.335 4.216 1.00 3.85 C ATOM 1641 O VAL 13 1.619 29.201 3.721 1.00 3.85 O ATOM 1642 CB VAL 13 2.687 31.549 5.362 1.00 3.85 C ATOM 1643 CG1 VAL 13 2.755 32.116 6.773 1.00 3.85 C ATOM 1644 CG2 VAL 13 3.699 32.130 4.416 1.00 3.85 C ATOM 1645 N ALA 14 3.817 28.745 3.703 1.00 3.84 N ATOM 1646 CA ALA 14 3.722 27.924 2.517 1.00 3.84 C ATOM 1647 C ALA 14 2.768 26.759 2.757 1.00 3.84 C ATOM 1648 O ALA 14 2.186 26.221 1.810 1.00 3.84 O ATOM 1649 CB ALA 14 5.086 27.411 2.112 1.00 3.84 C ATOM 1650 N GLU 15 2.649 26.315 4.021 1.00 3.51 N ATOM 1651 CA GLU 15 1.802 25.180 4.344 1.00 3.51 C ATOM 1652 C GLU 15 0.477 25.610 4.980 1.00 3.51 C ATOM 1653 O GLU 15 -0.535 24.914 4.812 1.00 3.51 O ATOM 1654 CB GLU 15 2.544 24.236 5.296 1.00 3.51 C ATOM 1655 CG GLU 15 3.812 23.611 4.699 1.00 3.51 C ATOM 1656 CD GLU 15 4.529 22.668 5.650 1.00 3.51 C ATOM 1657 OE1 GLU 15 4.123 22.564 6.784 1.00 3.51 O ATOM 1658 OE2 GLU 15 5.487 22.058 5.233 1.00 3.51 O ATOM 1659 N THR 16 0.468 26.737 5.698 1.00 3.05 N ATOM 1660 CA THR 16 -0.736 27.135 6.425 1.00 3.05 C ATOM 1661 C THR 16 -1.484 28.427 5.985 1.00 3.05 C ATOM 1662 O THR 16 -2.649 28.605 6.367 1.00 3.05 O ATOM 1663 CB THR 16 -0.384 27.189 7.922 1.00 3.05 C ATOM 1664 CG2 THR 16 0.024 25.813 8.417 1.00 3.05 C ATOM 1665 OG1 THR 16 0.689 28.094 8.121 1.00 3.05 O ATOM 1666 N GLY 17 -0.861 29.332 5.225 1.00 2.42 N ATOM 1667 CA GLY 17 -1.554 30.545 4.781 1.00 2.42 C ATOM 1668 C GLY 17 -2.203 31.363 5.901 1.00 2.42 C ATOM 1669 O GLY 17 -1.590 31.716 6.920 1.00 2.42 O ATOM 1670 N GLN 18 -3.507 31.603 5.707 1.00 1.83 N ATOM 1671 CA GLN 18 -4.369 32.366 6.611 1.00 1.83 C ATOM 1672 C GLN 18 -4.449 31.745 7.985 1.00 1.83 C ATOM 1673 O GLN 18 -4.698 32.446 8.976 1.00 1.83 O ATOM 1674 CB GLN 18 -5.796 32.464 6.049 1.00 1.83 C ATOM 1675 CG GLN 18 -6.002 33.318 4.780 1.00 1.83 C ATOM 1676 CD GLN 18 -5.834 34.827 4.986 1.00 1.83 C ATOM 1677 NE2 GLN 18 -5.382 35.502 3.931 1.00 1.83 N ATOM 1678 OE1 GLN 18 -6.129 35.375 6.064 1.00 1.83 O ATOM 1679 N ASN 19 -4.282 30.429 8.065 1.00 1.44 N ATOM 1680 CA ASN 19 -4.385 29.786 9.355 1.00 1.44 C ATOM 1681 C ASN 19 -3.223 30.233 10.218 1.00 1.44 C ATOM 1682 O ASN 19 -3.354 30.341 11.438 1.00 1.44 O ATOM 1683 CB ASN 19 -4.405 28.285 9.213 1.00 1.44 C ATOM 1684 CG ASN 19 -5.696 27.778 8.652 1.00 1.44 C ATOM 1685 ND2 ASN 19 -5.627 26.634 8.026 1.00 1.44 N ATOM 1686 OD1 ASN 19 -6.756 28.414 8.769 1.00 1.44 O ATOM 1687 N TRP 20 -2.073 30.503 9.596 1.00 0.98 N ATOM 1688 CA TRP 20 -0.937 30.928 10.374 1.00 0.98 C ATOM 1689 C TRP 20 -1.222 32.277 10.959 1.00 0.98 C ATOM 1690 O TRP 20 -1.011 32.500 12.139 1.00 0.98 O ATOM 1691 CB TRP 20 0.337 31.026 9.559 1.00 0.98 C ATOM 1692 CG TRP 20 1.454 31.394 10.423 1.00 0.98 C ATOM 1693 CD1 TRP 20 2.202 30.538 11.168 1.00 0.98 C ATOM 1694 CD2 TRP 20 1.960 32.693 10.681 1.00 0.98 C ATOM 1695 CE2 TRP 20 2.985 32.546 11.621 1.00 0.98 C ATOM 1696 CE3 TRP 20 1.629 33.959 10.217 1.00 0.98 C ATOM 1697 NE1 TRP 20 3.121 31.228 11.892 1.00 0.98 N ATOM 1698 CZ2 TRP 20 3.650 33.607 12.115 1.00 0.98 C ATOM 1699 CZ3 TRP 20 2.307 35.011 10.705 1.00 0.98 C ATOM 1700 CH2 TRP 20 3.287 34.833 11.644 1.00 0.98 C ATOM 1701 N ALA 21 -1.716 33.191 10.114 1.00 0.38 N ATOM 1702 CA ALA 21 -1.985 34.550 10.594 1.00 0.38 C ATOM 1703 C ALA 21 -3.020 34.560 11.701 1.00 0.38 C ATOM 1704 O ALA 21 -2.904 35.336 12.661 1.00 0.38 O ATOM 1705 CB ALA 21 -2.474 35.422 9.466 1.00 0.38 C ATOM 1706 N SER 22 -4.035 33.705 11.605 1.00 0.00 N ATOM 1707 CA SER 22 -5.047 33.686 12.646 1.00 0.00 C ATOM 1708 C SER 22 -4.445 33.197 13.962 1.00 0.00 C ATOM 1709 O SER 22 -4.649 33.803 15.026 1.00 0.00 O ATOM 1710 CB SER 22 -6.194 32.789 12.225 1.00 0.00 C ATOM 1711 OG SER 22 -6.860 33.311 11.101 1.00 0.00 O ATOM 1712 N LEU 23 -3.663 32.115 13.889 1.00 0.00 N ATOM 1713 CA LEU 23 -3.055 31.575 15.089 1.00 0.00 C ATOM 1714 C LEU 23 -2.028 32.532 15.652 1.00 0.00 C ATOM 1715 O LEU 23 -1.997 32.771 16.859 1.00 0.00 O ATOM 1716 CB LEU 23 -2.377 30.241 14.761 1.00 0.00 C ATOM 1717 CG LEU 23 -3.324 29.087 14.418 1.00 0.00 C ATOM 1718 CD1 LEU 23 -2.511 27.916 13.902 1.00 0.00 C ATOM 1719 CD2 LEU 23 -4.111 28.699 15.666 1.00 0.00 C ATOM 1720 N ALA 24 -1.230 33.127 14.766 1.00 0.29 N ATOM 1721 CA ALA 24 -0.187 34.052 15.148 1.00 0.29 C ATOM 1722 C ALA 24 -0.756 35.270 15.829 1.00 0.29 C ATOM 1723 O ALA 24 -0.215 35.733 16.823 1.00 0.29 O ATOM 1724 CB ALA 24 0.608 34.461 13.929 1.00 0.29 C ATOM 1725 N ALA 25 -1.880 35.789 15.350 1.00 0.82 N ATOM 1726 CA ALA 25 -2.431 36.953 16.009 1.00 0.82 C ATOM 1727 C ALA 25 -2.745 36.629 17.465 1.00 0.82 C ATOM 1728 O ALA 25 -2.478 37.416 18.380 1.00 0.82 O ATOM 1729 CB ALA 25 -3.668 37.449 15.296 1.00 0.82 C ATOM 1730 N ASN 26 -3.248 35.419 17.705 1.00 1.29 N ATOM 1731 CA ASN 26 -3.550 35.048 19.075 1.00 1.29 C ATOM 1732 C ASN 26 -2.272 34.774 19.881 1.00 1.29 C ATOM 1733 O ASN 26 -2.095 35.307 20.979 1.00 1.29 O ATOM 1734 CB ASN 26 -4.469 33.847 19.081 1.00 1.29 C ATOM 1735 CG ASN 26 -5.872 34.202 18.650 1.00 1.29 C ATOM 1736 ND2 ASN 26 -6.588 33.221 18.168 1.00 1.29 N ATOM 1737 OD1 ASN 26 -6.307 35.359 18.742 1.00 1.29 O ATOM 1738 N GLU 27 -1.339 34.012 19.305 1.00 1.58 N ATOM 1739 CA GLU 27 -0.093 33.639 19.977 1.00 1.58 C ATOM 1740 C GLU 27 0.778 34.844 20.317 1.00 1.58 C ATOM 1741 O GLU 27 1.389 34.918 21.383 1.00 1.58 O ATOM 1742 CB GLU 27 0.723 32.673 19.120 1.00 1.58 C ATOM 1743 CG GLU 27 0.143 31.273 18.967 1.00 1.58 C ATOM 1744 CD GLU 27 0.949 30.397 18.027 1.00 1.58 C ATOM 1745 OE1 GLU 27 1.846 30.905 17.386 1.00 1.58 O ATOM 1746 OE2 GLU 27 0.669 29.225 17.958 1.00 1.58 O ATOM 1747 N LEU 28 0.795 35.814 19.416 1.00 1.58 N ATOM 1748 CA LEU 28 1.599 37.010 19.545 1.00 1.58 C ATOM 1749 C LEU 28 0.884 38.072 20.385 1.00 1.58 C ATOM 1750 O LEU 28 1.427 39.149 20.621 1.00 1.58 O ATOM 1751 CB LEU 28 1.900 37.566 18.148 1.00 1.58 C ATOM 1752 CG LEU 28 2.717 36.641 17.214 1.00 1.58 C ATOM 1753 CD1 LEU 28 2.821 37.269 15.807 1.00 1.58 C ATOM 1754 CD2 LEU 28 4.058 36.405 17.809 1.00 1.58 C ATOM 1755 N ARG 29 -0.344 37.761 20.840 1.00 1.63 N ATOM 1756 CA ARG 29 -1.166 38.650 21.644 1.00 1.63 C ATOM 1757 C ARG 29 -1.366 40.016 20.992 1.00 1.63 C ATOM 1758 O ARG 29 -1.200 41.050 21.645 1.00 1.63 O ATOM 1759 CB ARG 29 -0.563 38.822 23.034 1.00 1.63 C ATOM 1760 CG ARG 29 -0.912 37.714 24.046 1.00 1.63 C ATOM 1761 CD ARG 29 -0.205 36.408 23.770 1.00 1.63 C ATOM 1762 NE ARG 29 -0.464 35.433 24.831 1.00 1.63 N ATOM 1763 CZ ARG 29 -0.049 34.140 24.854 1.00 1.63 C ATOM 1764 NH1 ARG 29 0.660 33.619 23.869 1.00 1.63 N ATOM 1765 NH2 ARG 29 -0.365 33.381 25.893 1.00 1.63 N ATOM 1766 N VAL 30 -1.717 40.025 19.703 1.00 1.35 N ATOM 1767 CA VAL 30 -1.879 41.280 18.979 1.00 1.35 C ATOM 1768 C VAL 30 -3.243 41.527 18.360 1.00 1.35 C ATOM 1769 O VAL 30 -3.813 40.675 17.676 1.00 1.35 O ATOM 1770 CB VAL 30 -0.804 41.340 17.889 1.00 1.35 C ATOM 1771 CG1 VAL 30 -0.876 40.120 17.052 1.00 1.35 C ATOM 1772 CG2 VAL 30 -1.013 42.551 16.989 1.00 1.35 C ATOM 1773 N THR 31 -3.732 42.746 18.565 1.00 1.05 N ATOM 1774 CA THR 31 -4.986 43.183 17.977 1.00 1.05 C ATOM 1775 C THR 31 -4.682 44.286 16.990 1.00 1.05 C ATOM 1776 O THR 31 -4.034 45.275 17.315 1.00 1.05 O ATOM 1777 CB THR 31 -5.970 43.700 19.040 1.00 1.05 C ATOM 1778 CG2 THR 31 -7.250 44.181 18.377 1.00 1.05 C ATOM 1779 OG1 THR 31 -6.278 42.648 19.966 1.00 1.05 O ATOM 1780 N GLU 32 -5.150 44.079 15.777 1.00 0.77 N ATOM 1781 CA GLU 32 -4.985 44.971 14.643 1.00 0.77 C ATOM 1782 C GLU 32 -6.075 44.641 13.645 1.00 0.77 C ATOM 1783 O GLU 32 -6.667 43.571 13.687 1.00 0.77 O ATOM 1784 CB GLU 32 -3.564 44.844 14.041 1.00 0.77 C ATOM 1785 CG GLU 32 -3.248 45.772 12.807 1.00 0.77 C ATOM 1786 CD GLU 32 -3.426 47.272 13.023 1.00 0.77 C ATOM 1787 OE1 GLU 32 -4.565 47.702 13.024 1.00 0.77 O ATOM 1788 OE2 GLU 32 -2.448 47.987 13.102 1.00 0.77 O ATOM 1789 N ARG 33 -6.366 45.574 12.764 1.00 0.33 N ATOM 1790 CA ARG 33 -7.363 45.330 11.744 1.00 0.33 C ATOM 1791 C ARG 33 -6.992 44.046 10.964 1.00 0.33 C ATOM 1792 O ARG 33 -5.843 43.906 10.536 1.00 0.33 O ATOM 1793 CB ARG 33 -7.444 46.523 10.827 1.00 0.33 C ATOM 1794 CG ARG 33 -8.046 47.785 11.436 1.00 0.33 C ATOM 1795 CD ARG 33 -8.035 48.924 10.471 1.00 0.33 C ATOM 1796 NE ARG 33 -8.609 50.142 11.036 1.00 0.33 N ATOM 1797 CZ ARG 33 -9.912 50.491 10.955 1.00 0.33 C ATOM 1798 NH1 ARG 33 -10.760 49.722 10.311 1.00 0.33 N ATOM 1799 NH2 ARG 33 -10.334 51.610 11.522 1.00 0.33 N ATOM 1800 N PRO 34 -7.959 43.125 10.731 1.00 0.00 N ATOM 1801 CA PRO 34 -7.792 41.862 10.017 1.00 0.00 C ATOM 1802 C PRO 34 -7.067 41.984 8.695 1.00 0.00 C ATOM 1803 O PRO 34 -6.327 41.084 8.316 1.00 0.00 O ATOM 1804 CB PRO 34 -9.246 41.427 9.806 1.00 0.00 C ATOM 1805 CG PRO 34 -9.969 41.991 11.003 1.00 0.00 C ATOM 1806 CD PRO 34 -9.330 43.329 11.248 1.00 0.00 C ATOM 1807 N PHE 35 -7.241 43.102 7.965 1.00 0.00 N ATOM 1808 CA PHE 35 -6.493 43.206 6.721 1.00 0.00 C ATOM 1809 C PHE 35 -5.005 43.079 6.954 1.00 0.00 C ATOM 1810 O PHE 35 -4.314 42.413 6.185 1.00 0.00 O ATOM 1811 CB PHE 35 -6.720 44.499 5.946 1.00 0.00 C ATOM 1812 CG PHE 35 -5.737 44.529 4.831 1.00 0.00 C ATOM 1813 CD1 PHE 35 -5.989 43.898 3.640 1.00 0.00 C ATOM 1814 CD2 PHE 35 -4.491 45.098 5.021 1.00 0.00 C ATOM 1815 CE1 PHE 35 -5.025 43.867 2.662 1.00 0.00 C ATOM 1816 CE2 PHE 35 -3.542 45.041 4.060 1.00 0.00 C ATOM 1817 CZ PHE 35 -3.795 44.441 2.891 1.00 0.00 C ATOM 1818 N TRP 36 -4.493 43.800 7.954 1.00 0.00 N ATOM 1819 CA TRP 36 -3.062 43.810 8.196 1.00 0.00 C ATOM 1820 C TRP 36 -2.642 42.441 8.657 1.00 0.00 C ATOM 1821 O TRP 36 -1.642 41.904 8.193 1.00 0.00 O ATOM 1822 CB TRP 36 -2.717 44.822 9.275 1.00 0.00 C ATOM 1823 CG TRP 36 -2.713 46.276 8.867 1.00 0.00 C ATOM 1824 CD1 TRP 36 -1.621 47.083 8.848 1.00 0.00 C ATOM 1825 CD2 TRP 36 -3.818 47.091 8.421 1.00 0.00 C ATOM 1826 CE2 TRP 36 -3.303 48.354 8.168 1.00 0.00 C ATOM 1827 CE3 TRP 36 -5.163 46.863 8.227 1.00 0.00 C ATOM 1828 NE1 TRP 36 -1.966 48.332 8.438 1.00 0.00 N ATOM 1829 CZ2 TRP 36 -4.092 49.394 7.721 1.00 0.00 C ATOM 1830 CZ3 TRP 36 -5.968 47.907 7.759 1.00 0.00 C ATOM 1831 CH2 TRP 36 -5.441 49.132 7.517 1.00 0.00 C ATOM 1832 N ILE 37 -3.450 41.844 9.512 1.00 0.85 N ATOM 1833 CA ILE 37 -3.067 40.538 10.032 1.00 0.85 C ATOM 1834 C ILE 37 -2.971 39.518 8.887 1.00 0.85 C ATOM 1835 O ILE 37 -2.021 38.752 8.801 1.00 0.85 O ATOM 1836 CB ILE 37 -4.038 40.099 11.136 1.00 0.85 C ATOM 1837 CG1 ILE 37 -3.814 41.035 12.354 1.00 0.85 C ATOM 1838 CG2 ILE 37 -3.839 38.642 11.489 1.00 0.85 C ATOM 1839 CD1 ILE 37 -4.845 40.930 13.439 1.00 0.85 C ATOM 1840 N SER 38 -3.951 39.533 7.976 1.00 1.20 N ATOM 1841 CA SER 38 -3.876 38.659 6.826 1.00 1.20 C ATOM 1842 C SER 38 -2.734 39.026 5.852 1.00 1.20 C ATOM 1843 O SER 38 -2.051 38.157 5.343 1.00 1.20 O ATOM 1844 CB SER 38 -5.198 38.650 6.074 1.00 1.20 C ATOM 1845 OG SER 38 -6.209 38.012 6.813 1.00 1.20 O ATOM 1846 N SER 39 -2.486 40.298 5.596 1.00 1.53 N ATOM 1847 CA SER 39 -1.404 40.562 4.634 1.00 1.53 C ATOM 1848 C SER 39 -0.041 40.206 5.251 1.00 1.53 C ATOM 1849 O SER 39 0.905 39.838 4.532 1.00 1.53 O ATOM 1850 CB SER 39 -1.428 42.004 4.150 1.00 1.53 C ATOM 1851 OG SER 39 -0.924 42.902 5.087 1.00 1.53 O ATOM 1852 N PHE 40 0.012 40.156 6.588 1.00 1.79 N ATOM 1853 CA PHE 40 1.243 39.864 7.322 1.00 1.79 C ATOM 1854 C PHE 40 1.628 38.385 7.278 1.00 1.79 C ATOM 1855 O PHE 40 2.645 37.981 7.873 1.00 1.79 O ATOM 1856 CB PHE 40 1.152 40.311 8.780 1.00 1.79 C ATOM 1857 CG PHE 40 1.141 41.822 9.004 1.00 1.79 C ATOM 1858 CD1 PHE 40 1.554 42.722 8.019 1.00 1.79 C ATOM 1859 CD2 PHE 40 0.722 42.339 10.213 1.00 1.79 C ATOM 1860 CE1 PHE 40 1.536 44.079 8.255 1.00 1.79 C ATOM 1861 CE2 PHE 40 0.706 43.683 10.455 1.00 1.79 C ATOM 1862 CZ PHE 40 1.120 44.563 9.469 1.00 1.79 C ATOM 1863 N ILE 41 0.857 37.599 6.514 1.00 2.16 N ATOM 1864 CA ILE 41 1.145 36.197 6.257 1.00 2.16 C ATOM 1865 C ILE 41 2.496 36.059 5.574 1.00 2.16 C ATOM 1866 O ILE 41 3.198 35.101 5.810 1.00 2.16 O ATOM 1867 CB ILE 41 0.072 35.562 5.353 1.00 2.16 C ATOM 1868 CG1 ILE 41 -1.172 35.444 6.087 1.00 2.16 C ATOM 1869 CG2 ILE 41 0.488 34.248 4.900 1.00 2.16 C ATOM 1870 CD1 ILE 41 -2.326 35.129 5.227 1.00 2.16 C ATOM 1871 N GLY 42 2.858 36.951 4.657 1.00 2.52 N ATOM 1872 CA GLY 42 4.142 36.697 4.044 1.00 2.52 C ATOM 1873 C GLY 42 4.891 37.922 3.574 1.00 2.52 C ATOM 1874 O GLY 42 4.412 38.703 2.762 1.00 2.52 O ATOM 1875 N ARG 43 6.155 37.984 3.989 1.00 2.74 N ATOM 1876 CA ARG 43 7.073 39.068 3.662 1.00 2.74 C ATOM 1877 C ARG 43 7.278 39.218 2.160 1.00 2.74 C ATOM 1878 O ARG 43 7.403 40.328 1.653 1.00 2.74 O ATOM 1879 CB ARG 43 8.403 38.832 4.369 1.00 2.74 C ATOM 1880 CG ARG 43 8.328 39.055 5.892 1.00 2.74 C ATOM 1881 CD ARG 43 9.544 38.689 6.634 1.00 2.74 C ATOM 1882 NE ARG 43 9.350 38.937 8.071 1.00 2.74 N ATOM 1883 CZ ARG 43 9.625 40.094 8.691 1.00 2.74 C ATOM 1884 NH1 ARG 43 10.162 41.108 8.037 1.00 2.74 N ATOM 1885 NH2 ARG 43 9.345 40.188 9.967 1.00 2.74 N ATOM 1886 N SER 44 7.279 38.095 1.458 1.00 2.86 N ATOM 1887 CA SER 44 7.477 38.080 0.016 1.00 2.86 C ATOM 1888 C SER 44 6.196 38.269 -0.806 1.00 2.86 C ATOM 1889 O SER 44 6.255 38.297 -2.037 1.00 2.86 O ATOM 1890 CB SER 44 8.153 36.775 -0.390 1.00 2.86 C ATOM 1891 OG SER 44 7.309 35.682 -0.136 1.00 2.86 O ATOM 1892 N LYS 45 5.032 38.316 -0.160 1.00 2.66 N ATOM 1893 CA LYS 45 3.775 38.411 -0.905 1.00 2.66 C ATOM 1894 C LYS 45 3.442 39.853 -1.256 1.00 2.66 C ATOM 1895 O LYS 45 3.643 40.757 -0.452 1.00 2.66 O ATOM 1896 CB LYS 45 2.636 37.794 -0.090 1.00 2.66 C ATOM 1897 CG LYS 45 2.776 36.276 0.154 1.00 2.66 C ATOM 1898 CD LYS 45 1.605 35.711 0.977 1.00 2.66 C ATOM 1899 CE LYS 45 1.778 34.212 1.252 1.00 2.66 C ATOM 1900 NZ LYS 45 1.735 33.400 -0.011 1.00 2.66 N TER END