####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 334), selected 44 , name T0953s2TS348_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS348_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 4 - 26 4.79 14.91 LCS_AVERAGE: 46.75 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 9 - 16 1.91 13.90 LONGEST_CONTINUOUS_SEGMENT: 8 22 - 29 1.75 24.01 LCS_AVERAGE: 14.36 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 12 - 16 0.80 13.98 LONGEST_CONTINUOUS_SEGMENT: 5 22 - 26 0.87 24.76 LCS_AVERAGE: 8.37 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 22 0 3 3 3 3 4 4 6 8 10 14 15 19 20 23 25 25 26 28 30 LCS_GDT V 3 V 3 3 3 22 0 3 4 4 4 4 6 6 7 10 12 13 16 20 21 22 23 24 24 27 LCS_GDT Q 4 Q 4 3 5 23 1 3 5 6 9 10 11 12 14 16 19 20 21 24 24 25 28 30 31 31 LCS_GDT G 5 G 5 3 5 23 3 5 5 8 9 10 11 12 14 16 19 20 21 25 26 28 30 30 31 32 LCS_GDT P 6 P 6 3 5 23 3 3 3 8 9 10 11 12 14 16 19 20 24 26 26 28 30 30 31 32 LCS_GDT W 7 W 7 3 5 23 3 5 5 8 9 10 11 12 14 16 19 20 24 26 26 28 30 30 31 32 LCS_GDT V 8 V 8 3 5 23 3 3 4 4 4 5 10 11 12 16 19 20 21 25 26 28 30 30 31 32 LCS_GDT G 9 G 9 3 8 23 3 3 5 8 9 10 11 12 14 16 19 20 24 26 26 28 30 30 31 32 LCS_GDT S 10 S 10 3 8 23 3 4 6 6 7 8 11 12 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT S 11 S 11 4 8 23 3 4 7 8 8 8 10 12 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT Y 12 Y 12 5 8 23 3 5 7 8 9 10 11 12 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT V 13 V 13 5 8 23 3 5 6 8 9 10 11 12 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT A 14 A 14 5 8 23 3 4 7 8 9 10 11 12 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT E 15 E 15 5 8 23 3 5 6 8 9 10 11 12 14 16 19 21 24 26 26 28 30 30 31 32 LCS_GDT T 16 T 16 5 8 23 3 4 6 6 7 9 11 12 14 16 19 21 24 26 26 28 30 30 31 32 LCS_GDT G 17 G 17 3 4 23 2 3 5 8 8 10 11 12 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT Q 18 Q 18 4 4 23 2 4 7 8 8 8 10 12 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT N 19 N 19 4 4 23 3 4 7 8 8 10 10 11 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT W 20 W 20 4 5 23 3 3 7 8 8 10 10 11 12 15 17 20 21 24 26 27 30 30 31 32 LCS_GDT A 21 A 21 4 5 23 3 4 7 8 8 10 10 10 14 16 19 21 24 26 26 28 30 30 31 32 LCS_GDT S 22 S 22 5 8 23 3 4 5 5 7 8 9 11 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT L 23 L 23 5 8 23 3 4 5 7 8 10 10 12 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT A 24 A 24 5 8 23 3 4 5 7 8 10 10 10 12 16 19 21 24 26 26 28 30 30 31 32 LCS_GDT A 25 A 25 5 8 23 3 4 5 7 8 10 10 10 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT N 26 N 26 5 8 23 4 4 5 7 8 10 10 12 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT E 27 E 27 4 8 21 4 4 5 7 8 10 10 10 12 14 16 17 20 24 26 27 30 30 31 32 LCS_GDT L 28 L 28 4 8 21 4 4 5 7 8 10 10 10 12 14 16 17 18 20 22 27 27 29 30 32 LCS_GDT R 29 R 29 4 8 21 4 4 5 7 8 10 10 11 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT V 30 V 30 3 5 21 3 3 3 4 5 7 9 11 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT T 31 T 31 3 5 21 3 3 3 4 6 7 8 11 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT E 32 E 32 3 5 20 3 3 3 4 6 7 8 11 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT R 33 R 33 3 7 20 2 3 5 6 6 8 10 11 14 17 19 21 24 26 26 28 30 30 31 32 LCS_GDT P 34 P 34 3 7 20 0 3 5 6 6 7 10 11 12 14 16 20 23 26 26 28 30 30 31 32 LCS_GDT F 35 F 35 4 7 20 3 3 5 6 6 8 10 11 12 14 19 21 23 26 26 28 30 30 31 32 LCS_GDT W 36 W 36 4 7 20 3 3 5 6 6 8 10 11 12 13 15 17 20 24 25 27 27 29 30 32 LCS_GDT I 37 I 37 4 7 15 3 3 5 6 6 8 10 11 11 11 11 13 14 14 16 17 18 22 23 25 LCS_GDT S 38 S 38 4 7 14 3 3 5 6 6 7 7 9 11 11 13 13 14 17 20 23 27 29 29 30 LCS_GDT S 39 S 39 3 7 14 3 3 4 5 6 8 10 11 11 11 13 13 14 17 23 25 27 29 29 31 LCS_GDT F 40 F 40 4 6 14 3 3 4 4 6 8 10 11 11 11 11 12 12 14 14 16 17 18 23 25 LCS_GDT I 41 I 41 4 6 14 3 3 4 5 6 8 10 11 11 11 11 12 12 14 14 16 17 19 23 25 LCS_GDT G 42 G 42 4 6 14 3 3 4 5 6 8 10 11 11 11 11 12 12 14 14 16 17 18 22 25 LCS_GDT R 43 R 43 4 6 14 3 3 4 5 6 8 10 11 11 11 11 12 12 14 14 16 17 18 19 24 LCS_GDT S 44 S 44 0 6 14 0 0 3 5 6 8 10 11 11 11 11 12 12 13 13 14 15 15 15 15 LCS_GDT K 45 K 45 0 3 14 0 0 3 3 3 3 3 4 5 8 8 10 11 11 13 13 14 14 14 15 LCS_AVERAGE LCS_A: 23.16 ( 8.37 14.36 46.75 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 7 8 9 10 11 12 14 17 19 21 24 26 26 28 30 30 31 32 GDT PERCENT_AT 9.09 11.36 15.91 18.18 20.45 22.73 25.00 27.27 31.82 38.64 43.18 47.73 54.55 59.09 59.09 63.64 68.18 68.18 70.45 72.73 GDT RMS_LOCAL 0.37 0.57 1.00 1.20 1.75 1.79 1.96 2.24 2.89 4.00 4.03 4.45 4.90 5.14 5.14 5.47 5.72 5.72 5.91 6.15 GDT RMS_ALL_AT 23.81 15.95 14.96 15.11 16.97 17.38 17.53 17.43 15.20 11.69 16.12 11.83 12.41 12.55 12.55 12.80 12.66 12.66 12.84 12.63 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 10.247 0 0.276 0.360 10.832 0.000 0.000 - LGA V 3 V 3 9.435 0 0.629 0.631 13.548 0.000 0.000 11.022 LGA Q 4 Q 4 2.711 0 0.549 0.453 4.881 30.455 24.242 3.311 LGA G 5 G 5 0.675 0 0.320 0.320 4.722 44.091 44.091 - LGA P 6 P 6 2.585 0 0.359 0.357 3.410 35.909 30.909 2.779 LGA W 7 W 7 2.069 1 0.520 1.120 10.083 55.455 17.143 - LGA V 8 V 8 5.517 0 0.480 0.529 9.327 2.727 1.558 8.963 LGA G 9 G 9 1.551 0 0.231 0.231 4.548 29.545 29.545 - LGA S 10 S 10 3.186 0 0.125 0.271 6.124 34.545 23.030 6.124 LGA S 11 S 11 5.049 0 0.212 0.672 8.010 8.182 5.455 8.010 LGA Y 12 Y 12 1.543 1 0.320 1.259 5.242 51.364 37.121 - LGA V 13 V 13 0.833 0 0.194 0.893 3.594 74.091 57.143 2.614 LGA A 14 A 14 1.802 0 0.081 0.085 2.868 62.273 55.273 - LGA E 15 E 15 1.402 0 0.667 1.210 5.369 48.182 30.707 5.362 LGA T 16 T 16 3.696 0 0.123 0.119 7.834 24.545 14.026 6.274 LGA G 17 G 17 2.641 0 0.207 0.207 5.523 25.909 25.909 - LGA Q 18 Q 18 6.940 0 0.591 0.969 11.613 1.364 0.606 11.613 LGA N 19 N 19 8.673 0 0.095 0.211 9.431 0.000 0.000 9.336 LGA W 20 W 20 10.978 1 0.600 1.278 19.793 0.000 0.000 - LGA A 21 A 21 9.179 0 0.380 0.377 10.594 0.000 0.000 - LGA S 22 S 22 10.934 0 0.553 0.848 12.926 0.000 0.000 12.926 LGA L 23 L 23 5.968 0 0.738 0.633 8.254 0.000 14.773 2.152 LGA A 24 A 24 11.390 0 0.227 0.240 13.170 0.000 0.000 - LGA A 25 A 25 10.243 0 0.649 0.621 10.625 0.000 0.000 - LGA N 26 N 26 7.773 0 0.522 0.571 10.195 0.000 7.955 4.785 LGA E 27 E 27 11.943 0 0.222 1.410 16.168 0.000 0.000 11.449 LGA L 28 L 28 17.267 0 0.105 0.122 20.316 0.000 0.000 19.262 LGA R 29 R 29 14.798 2 0.056 1.046 15.971 0.000 0.000 - LGA V 30 V 30 17.386 0 0.197 0.194 17.975 0.000 0.000 17.975 LGA T 31 T 31 18.738 0 0.746 0.998 22.667 0.000 0.000 22.667 LGA E 32 E 32 18.894 0 0.663 0.974 19.882 0.000 0.000 19.136 LGA R 33 R 33 16.586 2 0.659 0.926 18.883 0.000 0.000 - LGA P 34 P 34 16.220 0 0.602 0.577 19.471 0.000 0.000 14.254 LGA F 35 F 35 19.258 0 0.636 1.051 21.063 0.000 0.000 20.269 LGA W 36 W 36 21.417 1 0.335 0.365 24.430 0.000 0.000 - LGA I 37 I 37 25.305 0 0.281 0.994 27.948 0.000 0.000 26.025 LGA S 38 S 38 26.934 0 0.215 0.621 27.645 0.000 0.000 26.513 LGA S 39 S 39 23.840 0 0.614 0.795 24.895 0.000 0.000 20.153 LGA F 40 F 40 27.853 0 0.739 0.889 31.015 0.000 0.000 23.039 LGA I 41 I 41 34.052 0 0.619 1.528 38.401 0.000 0.000 35.281 LGA G 42 G 42 37.543 0 0.190 0.190 37.543 0.000 0.000 - LGA R 43 R 43 33.086 2 0.678 1.131 34.361 0.000 0.000 - LGA S 44 S 44 37.581 0 0.637 0.563 39.044 0.000 0.000 39.044 LGA K 45 K 45 38.102 0 0.183 0.310 39.348 0.000 0.000 38.251 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 334 97.09 44 28 SUMMARY(RMSD_GDC): 11.352 11.218 12.095 12.014 9.534 4.026 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.24 30.114 26.606 0.513 LGA_LOCAL RMSD: 2.241 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.428 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.352 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.585442 * X + -0.747944 * Y + 0.312790 * Z + -21.589727 Y_new = 0.691583 * X + -0.259416 * Y + 0.674104 * Z + 21.960566 Z_new = -0.423050 * X + 0.610969 * Y + 0.669138 * Z + -0.357968 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.273269 0.436808 0.739988 [DEG: 130.2487 25.0273 42.3982 ] ZXZ: 2.707151 0.837748 -0.605623 [DEG: 155.1083 47.9994 -34.6997 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS348_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS348_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.24 26.606 11.35 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS348_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 9 N ALA 2 12.516 40.873 4.995 1.00 6.84 ATOM 10 CA ALA 2 11.257 40.813 4.258 1.00 6.39 ATOM 11 C ALA 2 11.542 40.140 2.885 1.00 3.85 ATOM 12 O ALA 2 11.854 40.928 2.015 1.00 3.39 ATOM 13 CB ALA 2 10.674 42.205 4.050 1.00 8.13 ATOM 14 N VAL 3 12.278 39.033 2.995 1.00 3.26 ATOM 15 CA VAL 3 12.175 37.940 2.013 1.00 3.24 ATOM 16 C VAL 3 11.169 36.777 2.500 1.00 3.28 ATOM 17 O VAL 3 10.417 36.372 1.646 1.00 3.88 ATOM 18 CB VAL 3 13.579 37.358 1.764 1.00 2.36 ATOM 19 CG1 VAL 3 13.499 36.150 0.843 1.00 2.26 ATOM 20 CG2 VAL 3 14.485 38.428 1.174 1.00 3.22 ATOM 21 N GLN 4 11.017 36.187 3.804 1.00 4.13 ATOM 22 CA GLN 4 11.372 36.452 5.269 1.00 4.18 ATOM 23 C GLN 4 10.538 37.698 5.453 1.00 3.82 ATOM 24 O GLN 4 10.717 38.467 6.365 1.00 5.87 ATOM 25 CB GLN 4 12.857 36.699 5.544 1.00 6.82 ATOM 26 CG GLN 4 13.767 35.557 5.121 1.00 8.39 ATOM 27 CD GLN 4 15.210 35.786 5.529 1.00 7.40 ATOM 28 OE1 GLN 4 15.817 36.799 5.172 1.00 7.10 ATOM 29 NE2 GLN 4 15.768 34.842 6.279 1.00 7.21 ATOM 30 N GLY 5 9.607 37.840 4.519 1.00 1.90 ATOM 31 CA GLY 5 8.585 38.840 4.317 1.00 0.62 ATOM 32 C GLY 5 7.500 37.910 3.868 1.00 1.87 ATOM 33 O GLY 5 6.929 37.203 4.688 1.00 4.15 ATOM 34 N PRO 6 7.260 37.862 2.557 1.00 1.13 ATOM 35 CA PRO 6 6.509 36.821 1.870 1.00 1.17 ATOM 36 C PRO 6 7.400 35.563 1.918 1.00 1.59 ATOM 37 O PRO 6 7.732 34.948 0.915 1.00 3.27 ATOM 38 CB PRO 6 6.324 37.367 0.450 1.00 1.06 ATOM 39 CG PRO 6 7.564 38.155 0.198 1.00 0.46 ATOM 40 CD PRO 6 7.856 38.828 1.513 1.00 1.11 ATOM 41 N TRP 7 7.844 35.273 3.141 1.00 2.13 ATOM 42 CA TRP 7 8.593 34.079 3.441 1.00 3.38 ATOM 43 C TRP 7 7.491 33.159 3.173 1.00 4.28 ATOM 44 O TRP 7 6.377 33.568 3.440 1.00 6.14 ATOM 45 CB TRP 7 9.019 33.993 4.889 1.00 3.99 ATOM 46 CG TRP 7 9.840 32.784 5.221 1.00 3.72 ATOM 47 CD1 TRP 7 9.423 31.690 5.928 1.00 3.35 ATOM 48 CD2 TRP 7 11.222 32.515 4.850 1.00 4.30 ATOM 49 NE1 TRP 7 10.440 30.781 6.032 1.00 3.17 ATOM 50 CE2 TRP 7 11.547 31.269 5.381 1.00 3.88 ATOM 51 CE3 TRP 7 12.196 33.222 4.119 1.00 5.48 ATOM 52 CZ2 TRP 7 12.802 30.712 5.216 1.00 4.62 ATOM 53 CZ3 TRP 7 13.445 32.665 3.953 1.00 6.38 ATOM 54 N VAL 8 7.749 31.988 2.615 1.00 3.28 ATOM 55 CA VAL 8 6.676 31.044 2.275 1.00 3.50 ATOM 56 C VAL 8 5.476 31.983 2.163 1.00 5.33 ATOM 57 O VAL 8 5.492 32.842 1.287 1.00 6.57 ATOM 58 CB VAL 8 6.512 29.980 3.364 1.00 3.27 ATOM 59 CG1 VAL 8 5.419 29.013 2.972 1.00 4.74 ATOM 60 CG2 VAL 8 7.833 29.284 3.602 1.00 2.85 ATOM 61 N GLY 9 4.477 31.903 3.044 1.00 6.18 ATOM 62 CA GLY 9 3.520 32.996 3.066 1.00 5.98 ATOM 63 C GLY 9 4.008 34.137 4.136 1.00 4.55 ATOM 64 O GLY 9 3.491 35.240 3.993 1.00 5.53 ATOM 65 N SER 10 4.920 33.977 5.262 1.00 2.62 ATOM 66 CA SER 10 5.825 32.920 5.955 1.00 1.16 ATOM 67 C SER 10 4.906 31.752 6.234 1.00 3.07 ATOM 68 O SER 10 5.298 30.703 6.729 1.00 5.15 ATOM 69 CB SER 10 6.384 33.484 7.237 1.00 2.05 ATOM 70 OG SER 10 5.370 33.669 8.169 1.00 3.10 ATOM 71 N SER 11 3.639 32.020 5.944 1.00 2.98 ATOM 72 CA SER 11 2.468 31.190 6.109 1.00 1.93 ATOM 73 C SER 11 2.197 31.253 7.580 1.00 3.18 ATOM 74 O SER 11 1.237 30.676 8.057 1.00 3.72 ATOM 75 CB SER 11 2.705 29.767 5.673 1.00 1.10 ATOM 76 OG SER 11 3.069 29.714 4.347 1.00 1.67 ATOM 77 N TYR 12 3.045 31.975 8.329 1.00 4.19 ATOM 78 CA TYR 12 2.861 32.056 9.756 1.00 6.97 ATOM 79 C TYR 12 2.918 30.593 10.197 1.00 7.53 ATOM 80 O TYR 12 2.286 30.184 11.148 1.00 7.90 ATOM 81 CB TYR 12 1.543 32.734 10.139 1.00 9.07 ATOM 82 CG TYR 12 1.407 34.145 9.610 1.00 10.57 ATOM 83 CD1 TYR 12 0.733 34.378 8.420 1.00 10.78 ATOM 84 CD2 TYR 12 1.957 35.206 10.314 1.00 12.31 ATOM 85 CE1 TYR 12 0.608 35.667 7.938 1.00 12.74 ATOM 86 CE2 TYR 12 1.833 36.494 9.832 1.00 13.87 ATOM 87 CZ TYR 12 1.161 36.726 8.648 1.00 14.11 ATOM 88 N VAL 13 3.613 29.774 9.404 1.00 8.21 ATOM 89 CA VAL 13 3.842 28.406 9.789 1.00 7.59 ATOM 90 C VAL 13 5.237 28.561 10.334 1.00 6.21 ATOM 91 O VAL 13 5.799 27.657 10.932 1.00 6.25 ATOM 92 CB VAL 13 3.822 27.434 8.616 1.00 9.59 ATOM 93 CG1 VAL 13 5.103 27.581 7.818 1.00 10.76 ATOM 94 CG2 VAL 13 3.674 26.027 9.147 1.00 10.69 ATOM 95 N ALA 14 5.831 29.718 10.066 1.00 5.54 ATOM 96 CA ALA 14 7.185 30.011 10.499 1.00 6.30 ATOM 97 C ALA 14 7.166 30.071 12.055 1.00 6.58 ATOM 98 O ALA 14 8.241 29.796 12.571 1.00 7.63 ATOM 99 CB ALA 14 7.667 31.302 9.888 1.00 7.11 ATOM 100 N GLU 15 6.422 31.088 12.595 1.00 6.17 ATOM 101 CA GLU 15 5.734 30.748 13.863 1.00 4.39 ATOM 102 C GLU 15 5.048 29.480 13.472 1.00 2.26 ATOM 103 O GLU 15 4.254 29.479 12.556 1.00 1.10 ATOM 104 CB GLU 15 4.739 31.811 14.333 1.00 6.02 ATOM 105 CG GLU 15 5.381 33.105 14.814 1.00 8.20 ATOM 106 CD GLU 15 4.377 34.107 15.310 1.00 8.42 ATOM 107 OE1 GLU 15 3.203 33.833 15.233 1.00 9.43 ATOM 108 OE2 GLU 15 4.785 35.150 15.766 1.00 8.04 ATOM 109 N THR 16 5.331 28.411 14.190 1.00 2.89 ATOM 110 CA THR 16 4.875 27.076 13.809 1.00 3.81 ATOM 111 C THR 16 3.283 26.893 13.807 1.00 4.22 ATOM 112 O THR 16 2.924 25.741 13.590 1.00 4.62 ATOM 113 CB THR 16 5.523 26.040 14.746 1.00 4.76 ATOM 114 OG1 THR 16 5.151 26.320 16.102 1.00 4.82 ATOM 115 CG2 THR 16 7.038 26.081 14.621 1.00 5.84 ATOM 116 N GLY 17 2.256 27.865 14.098 1.00 4.50 ATOM 117 CA GLY 17 2.042 29.369 14.429 1.00 3.80 ATOM 118 C GLY 17 2.446 29.606 15.851 1.00 2.99 ATOM 119 O GLY 17 1.788 30.324 16.583 1.00 3.60 ATOM 120 N GLN 18 3.597 29.021 16.152 1.00 2.83 ATOM 121 CA GLN 18 4.400 28.808 17.368 1.00 2.12 ATOM 122 C GLN 18 3.749 27.618 18.292 1.00 1.03 ATOM 123 O GLN 18 4.154 27.597 19.444 1.00 1.11 ATOM 124 CB GLN 18 4.590 30.054 18.259 1.00 2.93 ATOM 125 CG GLN 18 5.152 31.294 17.631 1.00 4.36 ATOM 126 CD GLN 18 5.509 32.341 18.678 1.00 4.49 ATOM 127 OE1 GLN 18 6.316 32.083 19.577 1.00 3.82 ATOM 128 NE2 GLN 18 4.909 33.526 18.574 1.00 5.65 ATOM 129 N ASN 19 2.780 26.599 17.938 1.00 1.13 ATOM 130 CA ASN 19 1.961 26.134 16.734 1.00 0.96 ATOM 131 C ASN 19 0.855 27.300 16.580 1.00 3.58 ATOM 132 O ASN 19 0.283 27.345 15.484 1.00 5.03 ATOM 133 CB ASN 19 1.457 24.710 16.924 1.00 1.76 ATOM 134 CG ASN 19 2.539 23.678 16.764 1.00 3.16 ATOM 135 OD1 ASN 19 2.794 22.894 17.688 1.00 3.97 ATOM 136 ND2 ASN 19 3.174 23.651 15.624 1.00 5.03 ATOM 137 N TRP 20 0.546 28.341 17.547 1.00 4.45 ATOM 138 CA TRP 20 0.736 28.745 19.033 1.00 5.32 ATOM 139 C TRP 20 -0.723 28.503 19.595 1.00 5.39 ATOM 140 O TRP 20 -0.795 27.873 20.651 1.00 4.88 ATOM 141 CB TRP 20 1.136 30.202 19.230 1.00 7.33 ATOM 142 CG TRP 20 1.458 30.580 20.613 1.00 7.83 ATOM 143 CD1 TRP 20 2.542 30.181 21.335 1.00 8.87 ATOM 144 CD2 TRP 20 0.751 31.526 21.436 1.00 7.79 ATOM 145 NE1 TRP 20 2.529 30.777 22.571 1.00 9.71 ATOM 146 CE2 TRP 20 1.442 31.609 22.647 1.00 9.03 ATOM 147 CE3 TRP 20 -0.391 32.305 21.243 1.00 7.01 ATOM 148 CZ2 TRP 20 1.021 32.436 23.674 1.00 9.59 ATOM 149 CZ3 TRP 20 -0.812 33.139 22.269 1.00 7.29 ATOM 150 N ALA 21 -1.958 28.917 18.958 1.00 6.48 ATOM 151 CA ALA 21 -2.561 29.608 17.688 1.00 8.36 ATOM 152 C ALA 21 -2.068 28.724 16.439 1.00 8.79 ATOM 153 O ALA 21 -1.739 29.379 15.460 1.00 10.09 ATOM 154 CB ALA 21 -2.103 31.058 17.540 1.00 9.03 ATOM 155 N SER 22 -1.938 27.264 16.377 1.00 8.03 ATOM 156 CA SER 22 -2.183 26.011 17.276 1.00 7.66 ATOM 157 C SER 22 -3.364 26.572 17.983 1.00 6.01 ATOM 158 O SER 22 -3.236 26.944 19.156 1.00 5.44 ATOM 159 CB SER 22 -1.220 25.668 18.363 1.00 8.98 ATOM 160 OG SER 22 -1.323 24.322 18.725 1.00 11.24 ATOM 161 N LEU 23 -4.482 26.792 17.273 1.00 5.90 ATOM 162 CA LEU 23 -5.623 27.361 17.964 1.00 5.06 ATOM 163 C LEU 23 -5.515 26.502 19.171 1.00 4.10 ATOM 164 O LEU 23 -4.932 25.418 19.048 1.00 3.36 ATOM 165 CB LEU 23 -6.942 27.262 17.183 1.00 6.30 ATOM 166 CG LEU 23 -7.006 28.036 15.909 1.00 6.91 ATOM 167 CD1 LEU 23 -8.344 27.757 15.233 1.00 8.58 ATOM 168 CD2 LEU 23 -6.826 29.510 16.233 1.00 5.96 ATOM 169 N ALA 24 -6.128 26.847 20.285 1.00 4.17 ATOM 170 CA ALA 24 -5.758 26.279 21.575 1.00 4.29 ATOM 171 C ALA 24 -4.735 27.298 22.216 1.00 4.51 ATOM 172 O ALA 24 -4.268 26.906 23.302 1.00 5.53 ATOM 173 CB ALA 24 -5.147 24.877 21.464 1.00 4.35 ATOM 174 N ALA 25 -3.894 28.089 21.410 1.00 4.80 ATOM 175 CA ALA 25 -4.120 29.607 21.555 1.00 3.87 ATOM 176 C ALA 25 -5.537 29.742 21.013 1.00 2.81 ATOM 177 O ALA 25 -5.895 29.068 20.062 1.00 2.48 ATOM 178 CB ALA 25 -3.179 30.536 20.848 1.00 3.87 ATOM 179 N ASN 26 -6.368 30.571 21.538 1.00 2.94 ATOM 180 CA ASN 26 -7.742 30.466 21.049 1.00 2.99 ATOM 181 C ASN 26 -8.020 29.009 21.226 1.00 3.16 ATOM 182 O ASN 26 -7.630 28.407 22.222 1.00 3.05 ATOM 183 CB ASN 26 -7.915 30.921 19.611 1.00 3.92 ATOM 184 CG ASN 26 -7.570 32.372 19.419 1.00 2.67 ATOM 185 OD1 ASN 26 -8.024 33.236 20.178 1.00 2.99 ATOM 186 ND2 ASN 26 -6.776 32.656 18.418 1.00 2.39 ATOM 187 N GLU 27 -8.711 28.404 20.290 1.00 4.19 ATOM 188 CA GLU 27 -9.392 27.257 19.760 1.00 3.95 ATOM 189 C GLU 27 -10.412 27.149 20.831 1.00 1.82 ATOM 190 O GLU 27 -11.586 27.114 20.597 1.00 2.61 ATOM 191 CB GLU 27 -8.687 25.903 19.693 1.00 6.13 ATOM 192 CG GLU 27 -9.607 24.794 19.167 1.00 8.00 ATOM 193 CD GLU 27 -8.957 23.420 19.041 1.00 9.98 ATOM 194 OE1 GLU 27 -8.086 23.260 18.226 1.00 10.91 ATOM 195 OE2 GLU 27 -9.354 22.532 19.762 1.00 10.83 ATOM 196 N LEU 28 -9.904 27.214 22.061 1.00 0.98 ATOM 197 CA LEU 28 -10.647 27.219 23.319 1.00 0.89 ATOM 198 C LEU 28 -11.473 28.478 23.313 1.00 1.81 ATOM 199 O LEU 28 -12.367 28.648 24.128 1.00 3.79 ATOM 200 CB LEU 28 -9.636 27.213 24.464 1.00 1.02 ATOM 201 CG LEU 28 -8.766 25.946 24.525 1.00 0.99 ATOM 202 CD1 LEU 28 -7.696 26.116 25.587 1.00 3.06 ATOM 203 CD2 LEU 28 -9.643 24.743 24.796 1.00 1.83 ATOM 204 N ARG 29 -11.124 29.373 22.387 1.00 0.62 ATOM 205 CA ARG 29 -11.817 30.629 22.128 1.00 0.80 ATOM 206 C ARG 29 -12.504 30.501 20.772 1.00 1.84 ATOM 207 O ARG 29 -12.798 31.485 20.091 1.00 2.89 ATOM 208 CB ARG 29 -10.906 31.843 22.146 1.00 1.21 ATOM 209 CG ARG 29 -10.211 32.100 23.487 1.00 0.75 ATOM 210 CD ARG 29 -9.401 33.358 23.480 1.00 1.11 ATOM 211 NE ARG 29 -8.750 33.590 24.771 1.00 0.60 ATOM 212 CZ ARG 29 -8.024 34.684 25.087 1.00 1.54 ATOM 213 N VAL 30 -12.685 29.253 20.388 1.00 1.96 ATOM 214 CA VAL 30 -13.455 28.795 19.252 1.00 1.84 ATOM 215 C VAL 30 -14.181 27.406 19.782 1.00 1.50 ATOM 216 O VAL 30 -13.666 26.376 19.368 1.00 1.26 ATOM 217 CB VAL 30 -12.538 28.559 18.037 1.00 2.11 ATOM 218 CG1 VAL 30 -13.359 28.160 16.819 1.00 2.98 ATOM 219 CG2 VAL 30 -11.725 29.812 17.753 1.00 2.60 ATOM 220 N THR 31 -15.333 27.207 20.616 1.00 1.97 ATOM 221 CA THR 31 -16.398 28.005 21.334 1.00 4.00 ATOM 222 C THR 31 -15.747 29.469 21.579 1.00 5.11 ATOM 223 O THR 31 -14.545 29.441 21.683 1.00 6.93 ATOM 224 CB THR 31 -16.826 27.345 22.658 1.00 4.66 ATOM 225 OG1 THR 31 -17.361 26.042 22.395 1.00 5.86 ATOM 226 CG2 THR 31 -17.880 28.190 23.358 1.00 7.14 ATOM 227 N GLU 32 -16.380 30.759 21.627 1.00 5.04 ATOM 228 CA GLU 32 -17.784 31.363 21.717 1.00 5.58 ATOM 229 C GLU 32 -18.715 30.613 20.626 1.00 4.64 ATOM 230 O GLU 32 -19.871 30.463 20.984 1.00 6.27 ATOM 231 CB GLU 32 -17.733 32.885 21.586 1.00 7.98 ATOM 232 CG GLU 32 -17.097 33.581 22.795 1.00 10.13 ATOM 233 CD GLU 32 -17.059 35.094 22.701 1.00 12.40 ATOM 234 OE1 GLU 32 -17.483 35.630 21.709 1.00 12.93 ATOM 235 OE2 GLU 32 -16.599 35.709 23.636 1.00 13.70 ATOM 236 N ARG 33 -18.366 30.068 19.336 1.00 3.45 ATOM 237 CA ARG 33 -17.164 29.814 18.409 1.00 2.26 ATOM 238 C ARG 33 -16.566 31.269 18.025 1.00 2.04 ATOM 239 O ARG 33 -15.459 31.258 17.507 1.00 2.67 ATOM 240 CB ARG 33 -17.568 29.052 17.155 1.00 4.06 ATOM 241 CG ARG 33 -17.966 27.603 17.387 1.00 5.69 ATOM 242 CD ARG 33 -18.380 26.938 16.125 1.00 7.68 ATOM 243 NE ARG 33 -18.761 25.552 16.343 1.00 9.20 ATOM 244 CZ ARG 33 -19.298 24.750 15.403 1.00 11.38 ATOM 245 N PRO 34 -17.236 32.552 18.120 1.00 2.78 ATOM 246 CA PRO 34 -18.611 33.177 18.426 1.00 2.75 ATOM 247 C PRO 34 -19.563 32.586 17.431 1.00 1.78 ATOM 248 O PRO 34 -20.746 32.449 17.698 1.00 2.44 ATOM 249 CB PRO 34 -18.438 34.684 18.210 1.00 3.93 ATOM 250 CG PRO 34 -17.251 34.792 17.316 1.00 4.48 ATOM 251 CD PRO 34 -16.366 33.647 17.730 1.00 4.28 ATOM 252 N PHE 35 -18.996 32.181 16.272 1.00 1.99 ATOM 253 CA PHE 35 -19.767 31.724 15.121 1.00 1.58 ATOM 254 C PHE 35 -20.354 33.008 14.543 1.00 1.92 ATOM 255 O PHE 35 -20.969 33.013 13.492 1.00 3.24 ATOM 256 CB PHE 35 -20.919 30.790 15.479 1.00 1.55 ATOM 257 CG PHE 35 -21.687 30.398 14.274 1.00 1.33 ATOM 258 CD1 PHE 35 -21.311 29.332 13.474 1.00 1.79 ATOM 259 CD2 PHE 35 -22.789 31.155 13.908 1.00 0.95 ATOM 260 CE1 PHE 35 -22.042 29.020 12.339 1.00 2.01 ATOM 261 CE2 PHE 35 -23.513 30.853 12.780 1.00 1.25 ATOM 262 CZ PHE 35 -23.146 29.782 11.996 1.00 1.80 ATOM 263 N TRP 36 -20.180 34.092 15.300 1.00 1.87 ATOM 264 CA TRP 36 -20.844 35.350 15.129 1.00 1.56 ATOM 265 C TRP 36 -22.281 34.949 15.218 1.00 1.31 ATOM 266 O TRP 36 -22.646 34.148 16.075 1.00 2.67 ATOM 267 CB TRP 36 -20.514 35.941 13.789 1.00 3.59 ATOM 268 CG TRP 36 -19.073 36.196 13.653 1.00 4.38 ATOM 269 CD1 TRP 36 -18.191 35.516 12.863 1.00 6.16 ATOM 270 CD2 TRP 36 -18.307 37.184 14.360 1.00 4.07 ATOM 271 NE1 TRP 36 -16.931 36.031 13.018 1.00 7.11 ATOM 272 CE2 TRP 36 -16.983 37.056 13.932 1.00 5.68 ATOM 273 CE3 TRP 36 -18.634 38.158 15.310 1.00 3.17 ATOM 274 CZ2 TRP 36 -15.980 37.872 14.418 1.00 5.88 ATOM 275 CZ3 TRP 36 -17.630 38.976 15.796 1.00 3.11 ATOM 276 N ILE 37 -23.112 35.486 14.399 1.00 2.27 ATOM 277 CA ILE 37 -24.425 35.586 13.890 1.00 4.04 ATOM 278 C ILE 37 -24.256 35.107 12.453 1.00 3.10 ATOM 279 O ILE 37 -24.645 34.003 12.102 1.00 2.66 ATOM 280 CB ILE 37 -24.924 37.011 13.999 1.00 6.68 ATOM 281 CG1 ILE 37 -24.784 37.535 15.424 1.00 8.06 ATOM 282 CG2 ILE 37 -26.315 36.981 13.670 1.00 8.37 ATOM 283 CD1 ILE 37 -25.542 36.746 16.436 1.00 9.35 ATOM 284 N SER 38 -23.598 35.922 11.647 1.00 3.23 ATOM 285 CA SER 38 -23.180 35.500 10.326 1.00 3.92 ATOM 286 C SER 38 -21.604 35.686 10.432 1.00 5.04 ATOM 287 O SER 38 -20.963 34.689 10.156 1.00 6.86 ATOM 288 CB SER 38 -23.730 36.318 9.183 1.00 4.39 ATOM 289 OG SER 38 -23.235 35.845 7.958 1.00 3.98 ATOM 290 N SER 39 -20.865 36.853 10.876 1.00 4.60 ATOM 291 CA SER 39 -21.064 38.297 11.391 1.00 3.24 ATOM 292 C SER 39 -21.881 39.178 10.345 1.00 2.61 ATOM 293 O SER 39 -21.258 39.387 9.310 1.00 4.06 ATOM 294 CB SER 39 -19.732 38.989 11.587 1.00 3.10 ATOM 295 OG SER 39 -19.916 40.359 11.866 1.00 4.16 ATOM 296 N PHE 40 -23.193 39.760 10.479 1.00 1.90 ATOM 297 CA PHE 40 -24.452 39.708 11.372 1.00 3.02 ATOM 298 C PHE 40 -25.341 38.737 10.558 1.00 2.92 ATOM 299 O PHE 40 -25.271 38.953 9.367 1.00 4.07 ATOM 300 CB PHE 40 -25.135 41.063 11.568 1.00 3.73 ATOM 301 CG PHE 40 -24.297 42.061 12.316 1.00 4.56 ATOM 302 CD1 PHE 40 -23.483 42.954 11.636 1.00 4.53 ATOM 303 CD2 PHE 40 -24.320 42.108 13.701 1.00 5.60 ATOM 304 CE1 PHE 40 -22.711 43.872 12.323 1.00 5.45 ATOM 305 CE2 PHE 40 -23.551 43.024 14.391 1.00 6.38 ATOM 306 CZ PHE 40 -22.746 43.908 13.700 1.00 6.27 ATOM 307 N ILE 41 -26.522 38.378 11.056 1.00 2.82 ATOM 308 CA ILE 41 -27.003 37.083 10.512 1.00 3.24 ATOM 309 C ILE 41 -27.167 37.381 8.926 1.00 3.05 ATOM 310 O ILE 41 -26.872 36.451 8.179 1.00 4.79 ATOM 311 CB ILE 41 -28.324 36.633 11.161 1.00 5.07 ATOM 312 CG1 ILE 41 -28.620 35.171 10.811 1.00 6.81 ATOM 313 CG2 ILE 41 -29.468 37.531 10.718 1.00 5.16 ATOM 314 CD1 ILE 41 -27.609 34.195 11.366 1.00 8.76 ATOM 315 N GLY 42 -27.533 38.631 8.304 1.00 2.45 ATOM 316 CA GLY 42 -27.893 40.089 8.624 1.00 3.29 ATOM 317 C GLY 42 -26.662 40.796 8.156 1.00 3.96 ATOM 318 O GLY 42 -26.318 41.897 8.591 1.00 4.93 ATOM 319 N ARG 43 -25.985 40.065 7.277 1.00 4.53 ATOM 320 CA ARG 43 -24.772 40.406 6.541 1.00 3.97 ATOM 321 C ARG 43 -25.052 40.140 4.992 1.00 1.49 ATOM 322 O ARG 43 -24.149 40.495 4.256 1.00 1.61 ATOM 323 CB ARG 43 -23.571 39.598 6.980 1.00 6.66 ATOM 324 CG ARG 43 -22.271 39.906 6.208 1.00 9.02 ATOM 325 CD ARG 43 -21.747 41.315 6.448 1.00 11.61 ATOM 326 NE ARG 43 -21.212 41.475 7.796 1.00 12.13 ATOM 327 CZ ARG 43 -20.789 42.633 8.352 1.00 13.64 ATOM 328 N SER 44 -26.192 39.506 4.389 1.00 0.86 ATOM 329 CA SER 44 -27.579 38.851 4.691 1.00 1.44 ATOM 330 C SER 44 -28.553 39.778 5.472 1.00 2.65 ATOM 331 O SER 44 -29.584 39.387 5.989 1.00 4.45 ATOM 332 CB SER 44 -27.393 37.493 5.323 1.00 2.29 ATOM 333 OG SER 44 -26.757 36.624 4.427 1.00 2.99 ATOM 334 N LYS 45 -28.174 41.008 5.455 1.00 2.20 ATOM 335 CA LYS 45 -28.864 42.254 5.736 1.00 2.39 ATOM 336 C LYS 45 -28.108 43.001 4.673 1.00 2.96 ATOM 337 O LYS 45 -26.986 42.566 4.343 1.00 3.39 ATOM 338 CB LYS 45 -28.681 42.807 7.149 1.00 2.20 ATOM 339 CG LYS 45 -29.482 44.070 7.439 1.00 0.88 ATOM 340 CD LYS 45 -29.320 44.507 8.888 1.00 2.85 ATOM 341 CE LYS 45 -30.131 45.759 9.183 1.00 2.23 ATOM 342 NZ LYS 45 -29.983 46.198 10.596 1.00 4.62 TER END