####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS322_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS322_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 8 - 42 4.89 7.12 LONGEST_CONTINUOUS_SEGMENT: 35 9 - 43 4.96 7.21 LCS_AVERAGE: 73.97 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 20 - 35 1.96 8.50 LCS_AVERAGE: 27.43 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.47 7.83 LCS_AVERAGE: 16.32 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 7 13 3 3 4 7 9 9 16 18 23 25 26 29 31 32 33 34 36 39 39 40 LCS_GDT V 3 V 3 4 7 23 3 5 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT Q 4 Q 4 4 7 23 9 13 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT G 5 G 5 4 7 23 1 5 7 7 9 12 16 20 22 26 27 28 32 34 35 36 37 38 39 40 LCS_GDT P 6 P 6 3 7 23 3 3 4 5 9 11 13 14 22 26 27 28 30 34 35 36 37 38 39 40 LCS_GDT W 7 W 7 3 7 23 3 3 4 6 8 10 11 14 15 17 19 27 30 30 31 32 34 36 39 40 LCS_GDT V 8 V 8 3 11 35 3 3 6 6 8 11 19 22 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT G 9 G 9 9 12 35 9 9 11 12 15 16 19 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT S 10 S 10 9 12 35 9 9 9 10 10 11 14 15 21 24 26 30 32 34 35 36 37 39 39 40 LCS_GDT S 11 S 11 9 12 35 9 9 9 10 10 11 14 19 22 24 27 30 32 34 35 36 37 39 39 40 LCS_GDT Y 12 Y 12 9 12 35 9 9 9 10 10 12 15 19 22 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT V 13 V 13 9 12 35 9 9 9 10 10 11 14 19 21 24 27 30 32 34 35 36 37 39 39 40 LCS_GDT A 14 A 14 9 12 35 9 9 9 10 10 11 13 19 21 23 24 28 31 33 35 36 36 39 39 40 LCS_GDT E 15 E 15 9 12 35 9 9 9 10 10 11 13 19 21 22 23 26 30 33 33 36 36 39 39 40 LCS_GDT T 16 T 16 9 12 35 9 9 9 10 10 11 13 19 21 22 24 30 32 34 35 36 37 39 39 40 LCS_GDT G 17 G 17 9 12 35 9 9 9 10 10 11 13 19 21 23 26 30 32 34 35 36 37 39 39 40 LCS_GDT Q 18 Q 18 4 12 35 3 3 6 10 10 11 13 19 21 24 27 30 32 34 35 36 37 39 39 40 LCS_GDT N 19 N 19 4 13 35 3 3 4 5 7 11 15 19 23 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT W 20 W 20 12 16 35 10 13 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT A 21 A 21 12 16 35 10 13 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT S 22 S 22 12 16 35 10 13 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT L 23 L 23 12 16 35 10 13 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT A 24 A 24 12 16 35 10 13 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT A 25 A 25 12 16 35 10 13 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT N 26 N 26 12 16 35 10 13 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT E 27 E 27 12 16 35 10 13 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT L 28 L 28 12 16 35 10 13 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT R 29 R 29 12 16 35 10 13 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT V 30 V 30 12 16 35 8 13 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT T 31 T 31 12 16 35 9 13 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT E 32 E 32 3 16 35 3 5 7 7 9 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT R 33 R 33 3 16 35 3 3 3 11 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT P 34 P 34 3 16 35 3 3 3 5 9 14 20 23 24 25 27 28 30 30 33 34 37 39 39 40 LCS_GDT F 35 F 35 3 16 35 3 3 12 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT W 36 W 36 5 9 35 4 4 6 7 9 12 20 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT I 37 I 37 5 9 35 4 4 6 7 9 16 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT S 38 S 38 5 9 35 4 4 6 9 15 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT S 39 S 39 5 9 35 4 4 13 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT F 40 F 40 5 9 35 4 4 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT I 41 I 41 5 9 35 4 5 11 14 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 LCS_GDT G 42 G 42 4 9 35 4 4 5 7 9 12 14 19 22 25 27 29 32 33 35 36 37 39 39 40 LCS_GDT R 43 R 43 4 9 35 4 4 4 7 9 12 13 14 15 16 19 22 29 31 33 34 36 39 39 40 LCS_GDT S 44 S 44 4 9 28 4 4 5 7 9 12 13 14 15 16 17 19 27 29 31 32 34 37 39 40 LCS_GDT K 45 K 45 4 8 16 4 4 5 7 9 12 13 14 15 16 16 17 19 20 23 24 24 25 26 34 LCS_AVERAGE LCS_A: 39.24 ( 16.32 27.43 73.97 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 13 14 16 17 20 22 23 24 26 27 30 32 34 35 36 37 39 39 40 GDT PERCENT_AT 22.73 29.55 31.82 36.36 38.64 45.45 50.00 52.27 54.55 59.09 61.36 68.18 72.73 77.27 79.55 81.82 84.09 88.64 88.64 90.91 GDT RMS_LOCAL 0.31 0.53 0.67 0.98 1.11 1.62 2.01 2.17 2.30 2.74 2.91 3.91 4.17 4.65 4.74 4.91 5.04 5.41 5.41 5.58 GDT RMS_ALL_AT 7.81 8.03 7.99 8.15 8.12 8.07 8.13 7.98 8.01 8.44 8.29 7.09 6.98 7.15 7.00 7.05 7.16 6.97 7.17 7.08 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 6.728 0 0.700 0.636 8.839 0.000 0.000 - LGA V 3 V 3 2.396 0 0.181 0.214 4.041 45.455 33.766 4.041 LGA Q 4 Q 4 1.191 0 0.588 1.287 6.387 38.182 29.293 5.768 LGA G 5 G 5 7.001 0 0.217 0.217 7.922 0.000 0.000 - LGA P 6 P 6 7.301 0 0.069 0.459 8.476 0.000 0.000 7.722 LGA W 7 W 7 8.170 0 0.561 1.438 19.094 0.000 0.000 19.094 LGA V 8 V 8 5.067 0 0.534 0.563 8.897 4.091 2.338 5.411 LGA G 9 G 9 4.245 0 0.496 0.496 6.178 5.909 5.909 - LGA S 10 S 10 10.662 0 0.130 0.133 12.544 0.000 0.000 11.385 LGA S 11 S 11 11.131 0 0.080 0.606 12.683 0.000 0.000 10.698 LGA Y 12 Y 12 8.227 0 0.059 1.310 9.903 0.000 0.152 9.677 LGA V 13 V 13 10.264 0 0.018 0.107 13.748 0.000 0.000 13.199 LGA A 14 A 14 16.538 0 0.084 0.082 18.975 0.000 0.000 - LGA E 15 E 15 16.724 0 0.046 1.218 18.150 0.000 0.000 18.031 LGA T 16 T 16 13.799 0 0.025 0.085 14.432 0.000 0.000 9.342 LGA G 17 G 17 14.415 0 0.640 0.640 14.415 0.000 0.000 - LGA Q 18 Q 18 11.446 0 0.638 1.523 13.947 0.000 0.000 13.391 LGA N 19 N 19 7.532 0 0.086 0.362 11.881 0.455 0.227 10.883 LGA W 20 W 20 0.443 0 0.612 1.200 10.073 72.727 23.117 10.073 LGA A 21 A 21 0.999 0 0.057 0.065 1.247 81.818 78.545 - LGA S 22 S 22 0.344 0 0.083 0.681 2.304 95.455 86.667 2.304 LGA L 23 L 23 0.592 0 0.113 1.398 5.183 90.909 58.182 3.220 LGA A 24 A 24 0.701 0 0.039 0.052 0.855 81.818 81.818 - LGA A 25 A 25 0.641 0 0.034 0.034 0.777 81.818 81.818 - LGA N 26 N 26 0.480 0 0.049 1.109 2.988 100.000 78.182 2.988 LGA E 27 E 27 0.524 0 0.079 0.996 5.225 95.455 63.838 5.225 LGA L 28 L 28 0.261 0 0.117 1.336 3.176 95.455 69.545 3.176 LGA R 29 R 29 0.563 0 0.049 0.646 3.125 95.455 64.463 2.244 LGA V 30 V 30 0.807 0 0.364 0.990 3.689 68.636 61.818 3.689 LGA T 31 T 31 0.546 0 0.291 0.287 3.025 82.273 58.961 2.693 LGA E 32 E 32 4.549 0 0.496 1.148 8.787 18.636 8.283 7.864 LGA R 33 R 33 3.114 0 0.083 0.977 7.552 9.091 7.603 6.129 LGA P 34 P 34 5.572 0 0.625 0.625 6.885 0.000 0.000 6.885 LGA F 35 F 35 2.525 0 0.657 1.255 8.181 29.091 11.074 8.181 LGA W 36 W 36 4.025 0 0.586 0.650 11.895 25.000 7.143 11.895 LGA I 37 I 37 3.695 0 0.107 0.350 5.990 23.636 12.045 5.990 LGA S 38 S 38 3.621 0 0.091 0.643 6.744 16.818 11.212 6.744 LGA S 39 S 39 2.568 0 0.301 0.364 4.549 26.818 28.788 2.269 LGA F 40 F 40 1.726 0 0.040 0.578 9.187 58.182 23.967 9.134 LGA I 41 I 41 3.203 0 0.657 0.899 6.949 17.273 8.636 6.894 LGA G 42 G 42 8.995 0 0.643 0.643 9.912 0.000 0.000 - LGA R 43 R 43 12.706 0 0.311 1.551 23.195 0.000 0.000 23.195 LGA S 44 S 44 13.853 0 0.067 0.675 17.755 0.000 0.000 12.166 LGA K 45 K 45 20.422 0 0.357 1.119 29.879 0.000 0.000 29.879 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 6.895 6.854 8.544 30.919 22.668 6.338 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 23 2.17 50.000 44.805 1.013 LGA_LOCAL RMSD: 2.171 Number of atoms: 23 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.979 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 6.895 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.128677 * X + 0.901385 * Y + 0.413458 * Z + -96.556511 Y_new = 0.967343 * X + -0.022278 * Y + -0.252488 * Z + 14.590291 Z_new = -0.218378 * X + 0.432445 * Y + -0.874816 * Z + 43.194691 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.438552 0.220152 2.682493 [DEG: 82.4230 12.6138 153.6956 ] ZXZ: 1.022565 2.635851 -0.467627 [DEG: 58.5886 151.0231 -26.7931 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS322_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS322_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 23 2.17 44.805 6.90 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS322_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 17 N ALA 2 8.071 42.444 9.948 1.00 3.60 ATOM 19 CA ALA 2 8.694 42.362 11.262 1.00 3.60 ATOM 21 CB ALA 2 7.699 42.926 12.275 1.00 3.60 ATOM 25 C ALA 2 9.216 40.964 11.645 1.00 3.60 ATOM 26 O ALA 2 9.966 40.822 12.610 1.00 3.60 ATOM 27 N VAL 3 8.845 39.928 10.891 1.00 3.37 ATOM 29 CA VAL 3 9.091 38.511 11.182 1.00 3.37 ATOM 31 CB VAL 3 7.923 37.874 11.973 1.00 3.37 ATOM 33 CG1 VAL 3 8.256 36.439 12.408 1.00 3.37 ATOM 37 CG2 VAL 3 7.551 38.648 13.243 1.00 3.37 ATOM 41 C VAL 3 9.302 37.772 9.865 1.00 3.37 ATOM 42 O VAL 3 8.340 37.328 9.246 1.00 3.37 ATOM 43 N GLN 4 10.553 37.621 9.405 1.00 3.05 ATOM 45 CA GLN 4 10.823 37.011 8.089 1.00 3.05 ATOM 47 CB GLN 4 12.073 37.605 7.406 1.00 3.05 ATOM 50 CG GLN 4 11.962 37.654 5.862 1.00 3.05 ATOM 53 CD GLN 4 10.858 38.580 5.331 1.00 3.05 ATOM 54 OE1 GLN 4 11.073 39.749 5.035 1.00 3.05 ATOM 55 NE2 GLN 4 9.635 38.109 5.198 1.00 3.05 ATOM 58 C GLN 4 10.655 35.476 8.019 1.00 3.05 ATOM 59 O GLN 4 11.268 34.806 7.194 1.00 3.05 ATOM 60 N GLY 5 9.762 34.931 8.847 1.00 3.88 ATOM 62 CA GLY 5 9.203 33.589 8.728 1.00 3.88 ATOM 65 C GLY 5 7.857 33.654 8.015 1.00 3.88 ATOM 66 O GLY 5 6.955 34.224 8.613 1.00 3.88 ATOM 67 N PRO 6 7.686 33.075 6.805 1.00 3.08 ATOM 68 CD PRO 6 8.731 32.391 6.050 1.00 3.08 ATOM 71 CG PRO 6 8.183 32.181 4.639 1.00 3.08 ATOM 74 CB PRO 6 6.676 32.138 4.857 1.00 3.08 ATOM 77 CA PRO 6 6.463 33.152 5.982 1.00 3.08 ATOM 79 C PRO 6 5.101 32.927 6.672 1.00 3.08 ATOM 80 O PRO 6 4.085 33.403 6.154 1.00 3.08 ATOM 81 N TRP 7 5.136 32.242 7.830 1.00 2.14 ATOM 83 CA TRP 7 4.133 32.103 8.903 1.00 2.14 ATOM 85 CB TRP 7 4.644 32.826 10.161 1.00 2.14 ATOM 88 CG TRP 7 4.066 32.481 11.502 1.00 2.14 ATOM 89 CD1 TRP 7 2.870 31.908 11.785 1.00 2.14 ATOM 91 NE1 TRP 7 2.754 31.726 13.153 1.00 2.14 ATOM 93 CE2 TRP 7 3.880 32.153 13.823 1.00 2.14 ATOM 94 CZ2 TRP 7 4.268 32.138 15.171 1.00 2.14 ATOM 96 CH2 TRP 7 5.514 32.678 15.535 1.00 2.14 ATOM 98 CZ3 TRP 7 6.358 33.220 14.547 1.00 2.14 ATOM 100 CE3 TRP 7 5.967 33.211 13.194 1.00 2.14 ATOM 102 CD2 TRP 7 4.722 32.672 12.796 1.00 2.14 ATOM 103 C TRP 7 2.721 32.497 8.465 1.00 2.14 ATOM 104 O TRP 7 1.985 31.594 8.068 1.00 2.14 ATOM 105 N VAL 8 2.388 33.801 8.441 1.00 1.91 ATOM 107 CA VAL 8 1.304 34.337 7.597 1.00 1.91 ATOM 109 CB VAL 8 -0.082 34.332 8.281 1.00 1.91 ATOM 111 CG1 VAL 8 -1.158 34.709 7.254 1.00 1.91 ATOM 115 CG2 VAL 8 -0.493 32.947 8.762 1.00 1.91 ATOM 119 C VAL 8 1.559 35.718 6.982 1.00 1.91 ATOM 120 O VAL 8 1.177 36.751 7.527 1.00 1.91 ATOM 121 N GLY 9 2.112 35.739 5.769 1.00 1.88 ATOM 123 CA GLY 9 1.898 36.875 4.847 1.00 1.88 ATOM 126 C GLY 9 0.530 36.870 4.165 1.00 1.88 ATOM 127 O GLY 9 -0.168 35.870 4.208 1.00 1.88 ATOM 128 N SER 10 0.184 37.951 3.462 1.00 2.14 ATOM 130 CA SER 10 -1.031 38.114 2.623 1.00 2.14 ATOM 132 CB SER 10 -0.761 39.341 1.737 1.00 2.14 ATOM 135 OG SER 10 0.493 39.243 1.072 1.00 2.14 ATOM 137 C SER 10 -1.352 36.917 1.709 1.00 2.14 ATOM 138 O SER 10 -2.474 36.401 1.704 1.00 2.14 ATOM 139 N SER 11 -0.364 36.462 0.935 1.00 2.11 ATOM 141 CA SER 11 -0.540 35.296 0.076 1.00 2.11 ATOM 143 CB SER 11 0.685 35.043 -0.811 1.00 2.11 ATOM 146 OG SER 11 1.758 34.507 -0.071 1.00 2.11 ATOM 148 C SER 11 -0.902 34.079 0.920 1.00 2.11 ATOM 149 O SER 11 -1.949 33.501 0.686 1.00 2.11 ATOM 150 N TYR 12 -0.160 33.801 1.994 1.00 1.66 ATOM 152 CA TYR 12 -0.425 32.687 2.898 1.00 1.66 ATOM 154 CB TYR 12 0.709 32.575 3.924 1.00 1.66 ATOM 157 CG TYR 12 2.066 32.447 3.254 1.00 1.66 ATOM 158 CD1 TYR 12 2.915 33.564 3.140 1.00 1.66 ATOM 160 CE1 TYR 12 4.124 33.468 2.428 1.00 1.66 ATOM 162 CZ TYR 12 4.474 32.258 1.798 1.00 1.66 ATOM 163 OH TYR 12 5.636 32.174 1.100 1.00 1.66 ATOM 165 CE2 TYR 12 3.620 31.141 1.896 1.00 1.66 ATOM 167 CD2 TYR 12 2.424 31.237 2.630 1.00 1.66 ATOM 169 C TYR 12 -1.831 32.752 3.534 1.00 1.66 ATOM 170 O TYR 12 -2.493 31.717 3.604 1.00 1.66 ATOM 171 N VAL 13 -2.353 33.943 3.888 1.00 1.46 ATOM 173 CA VAL 13 -3.772 34.163 4.255 1.00 1.46 ATOM 175 CB VAL 13 -4.177 35.661 4.413 1.00 1.46 ATOM 177 CG1 VAL 13 -5.682 35.848 4.701 1.00 1.46 ATOM 181 CG2 VAL 13 -3.370 36.446 5.443 1.00 1.46 ATOM 185 C VAL 13 -4.696 33.629 3.165 1.00 1.46 ATOM 186 O VAL 13 -5.657 32.924 3.464 1.00 1.46 ATOM 187 N ALA 14 -4.442 33.981 1.904 1.00 1.81 ATOM 189 CA ALA 14 -5.296 33.511 0.818 1.00 1.81 ATOM 191 CB ALA 14 -5.027 34.381 -0.415 1.00 1.81 ATOM 195 C ALA 14 -5.137 32.003 0.481 1.00 1.81 ATOM 196 O ALA 14 -6.084 31.378 0.008 1.00 1.81 ATOM 197 N GLU 15 -3.960 31.418 0.719 1.00 1.79 ATOM 199 CA GLU 15 -3.585 30.020 0.448 1.00 1.79 ATOM 201 CB GLU 15 -2.042 29.902 0.473 1.00 1.79 ATOM 204 CG GLU 15 -1.275 30.618 -0.658 1.00 1.79 ATOM 207 CD GLU 15 0.201 30.881 -0.283 1.00 1.79 ATOM 208 OE1 GLU 15 0.684 32.024 -0.484 1.00 1.79 ATOM 209 OE2 GLU 15 0.855 29.938 0.216 1.00 1.79 ATOM 210 C GLU 15 -4.140 29.036 1.495 1.00 1.79 ATOM 211 O GLU 15 -4.402 27.876 1.181 1.00 1.79 ATOM 212 N THR 16 -4.310 29.489 2.742 1.00 1.74 ATOM 214 CA THR 16 -4.604 28.625 3.909 1.00 1.74 ATOM 216 CB THR 16 -3.437 28.636 4.904 1.00 1.74 ATOM 218 CG2 THR 16 -2.116 28.153 4.306 1.00 1.74 ATOM 222 OG1 THR 16 -3.227 29.943 5.366 1.00 1.74 ATOM 224 C THR 16 -5.886 29.006 4.648 1.00 1.74 ATOM 225 O THR 16 -6.440 28.204 5.402 1.00 1.74 ATOM 226 N GLY 17 -6.396 30.209 4.390 1.00 2.11 ATOM 228 CA GLY 17 -7.695 30.696 4.820 1.00 2.11 ATOM 231 C GLY 17 -7.592 31.810 5.874 1.00 2.11 ATOM 232 O GLY 17 -6.637 31.933 6.661 1.00 2.11 ATOM 233 N GLN 18 -8.684 32.572 5.952 1.00 1.99 ATOM 235 CA GLN 18 -8.956 33.546 7.014 1.00 1.99 ATOM 237 CB GLN 18 -10.420 34.011 6.843 1.00 1.99 ATOM 240 CG GLN 18 -11.034 34.756 8.043 1.00 1.99 ATOM 243 CD GLN 18 -10.262 35.999 8.465 1.00 1.99 ATOM 244 OE1 GLN 18 -9.694 36.714 7.657 1.00 1.99 ATOM 245 NE2 GLN 18 -10.201 36.296 9.744 1.00 1.99 ATOM 248 C GLN 18 -8.718 32.957 8.413 1.00 1.99 ATOM 249 O GLN 18 -8.238 33.652 9.301 1.00 1.99 ATOM 250 N ASN 19 -9.034 31.676 8.619 1.00 1.79 ATOM 252 CA ASN 19 -8.808 30.975 9.879 1.00 1.79 ATOM 254 CB ASN 19 -9.364 29.537 9.775 1.00 1.79 ATOM 257 CG ASN 19 -10.815 29.452 9.317 1.00 1.79 ATOM 258 OD1 ASN 19 -11.172 29.925 8.252 1.00 1.79 ATOM 259 ND2 ASN 19 -11.694 28.833 10.071 1.00 1.79 ATOM 262 C ASN 19 -7.324 30.966 10.279 1.00 1.79 ATOM 263 O ASN 19 -7.001 31.296 11.420 1.00 1.79 ATOM 264 N TRP 20 -6.430 30.632 9.342 1.00 1.57 ATOM 266 CA TRP 20 -4.981 30.592 9.562 1.00 1.57 ATOM 268 CB TRP 20 -4.342 29.848 8.388 1.00 1.57 ATOM 271 CG TRP 20 -2.903 29.489 8.575 1.00 1.57 ATOM 272 CD1 TRP 20 -1.864 30.128 8.005 1.00 1.57 ATOM 274 NE1 TRP 20 -0.670 29.581 8.425 1.00 1.57 ATOM 276 CE2 TRP 20 -0.888 28.494 9.245 1.00 1.57 ATOM 277 CZ2 TRP 20 -0.030 27.597 9.896 1.00 1.57 ATOM 279 CH2 TRP 20 -0.583 26.562 10.669 1.00 1.57 ATOM 281 CZ3 TRP 20 -1.981 26.433 10.776 1.00 1.57 ATOM 283 CE3 TRP 20 -2.835 27.347 10.128 1.00 1.57 ATOM 285 CD2 TRP 20 -2.310 28.403 9.351 1.00 1.57 ATOM 286 C TRP 20 -4.396 31.994 9.759 1.00 1.57 ATOM 287 O TRP 20 -3.568 32.200 10.646 1.00 1.57 ATOM 288 N ALA 21 -4.914 32.990 9.031 1.00 1.25 ATOM 290 CA ALA 21 -4.552 34.393 9.273 1.00 1.25 ATOM 292 CB ALA 21 -5.210 35.227 8.186 1.00 1.25 ATOM 296 C ALA 21 -4.928 34.914 10.672 1.00 1.25 ATOM 297 O ALA 21 -4.135 35.599 11.329 1.00 1.25 ATOM 298 N SER 22 -6.134 34.590 11.146 1.00 1.25 ATOM 300 CA SER 22 -6.548 34.871 12.519 1.00 1.25 ATOM 302 CB SER 22 -7.993 34.417 12.768 1.00 1.25 ATOM 305 OG SER 22 -8.907 35.450 12.439 1.00 1.25 ATOM 307 C SER 22 -5.610 34.194 13.516 1.00 1.25 ATOM 308 O SER 22 -5.053 34.896 14.356 1.00 1.25 ATOM 309 N LEU 23 -5.381 32.881 13.376 1.00 1.43 ATOM 311 CA LEU 23 -4.498 32.109 14.257 1.00 1.43 ATOM 313 CB LEU 23 -4.399 30.671 13.709 1.00 1.43 ATOM 316 CG LEU 23 -3.426 29.747 14.468 1.00 1.43 ATOM 318 CD1 LEU 23 -3.864 29.500 15.912 1.00 1.43 ATOM 322 CD2 LEU 23 -3.355 28.396 13.754 1.00 1.43 ATOM 326 C LEU 23 -3.123 32.766 14.410 1.00 1.43 ATOM 327 O LEU 23 -2.717 33.047 15.529 1.00 1.43 ATOM 328 N ALA 24 -2.459 33.090 13.301 1.00 1.26 ATOM 330 CA ALA 24 -1.135 33.707 13.347 1.00 1.26 ATOM 332 CB ALA 24 -0.530 33.589 11.959 1.00 1.26 ATOM 336 C ALA 24 -1.133 35.150 13.907 1.00 1.26 ATOM 337 O ALA 24 -0.195 35.545 14.604 1.00 1.26 ATOM 338 N ALA 25 -2.201 35.938 13.688 1.00 1.03 ATOM 340 CA ALA 25 -2.375 37.221 14.391 1.00 1.03 ATOM 342 CB ALA 25 -3.622 37.937 13.848 1.00 1.03 ATOM 346 C ALA 25 -2.447 37.061 15.927 1.00 1.03 ATOM 347 O ALA 25 -1.834 37.843 16.668 1.00 1.03 ATOM 348 N ASN 26 -3.153 36.024 16.393 1.00 1.31 ATOM 350 CA ASN 26 -3.269 35.688 17.811 1.00 1.31 ATOM 352 CB ASN 26 -4.380 34.627 18.020 1.00 1.31 ATOM 355 CG ASN 26 -5.711 34.824 17.291 1.00 1.31 ATOM 356 OD1 ASN 26 -6.327 33.874 16.829 1.00 1.31 ATOM 357 ND2 ASN 26 -6.258 36.013 17.191 1.00 1.31 ATOM 360 C ASN 26 -1.913 35.200 18.375 1.00 1.31 ATOM 361 O ASN 26 -1.478 35.667 19.425 1.00 1.31 ATOM 362 N GLU 27 -1.189 34.330 17.659 1.00 1.79 ATOM 364 CA GLU 27 0.157 33.847 18.007 1.00 1.79 ATOM 366 CB GLU 27 0.705 32.902 16.928 1.00 1.79 ATOM 369 CG GLU 27 0.057 31.520 16.884 1.00 1.79 ATOM 372 CD GLU 27 0.761 30.701 15.799 1.00 1.79 ATOM 373 OE1 GLU 27 0.466 30.928 14.603 1.00 1.79 ATOM 374 OE2 GLU 27 1.660 29.916 16.160 1.00 1.79 ATOM 375 C GLU 27 1.170 34.977 18.151 1.00 1.79 ATOM 376 O GLU 27 1.988 34.955 19.077 1.00 1.79 ATOM 377 N LEU 28 1.123 35.976 17.263 1.00 1.95 ATOM 379 CA LEU 28 1.983 37.152 17.340 1.00 1.95 ATOM 381 CB LEU 28 2.279 37.678 15.931 1.00 1.95 ATOM 384 CG LEU 28 3.698 38.261 15.831 1.00 1.95 ATOM 386 CD1 LEU 28 4.786 37.180 15.874 1.00 1.95 ATOM 390 CD2 LEU 28 3.865 38.985 14.507 1.00 1.95 ATOM 394 C LEU 28 1.465 38.221 18.329 1.00 1.95 ATOM 395 O LEU 28 2.233 39.106 18.709 1.00 1.95 ATOM 396 N ARG 29 0.229 38.076 18.838 1.00 2.27 ATOM 398 CA ARG 29 -0.474 39.003 19.750 1.00 2.27 ATOM 400 CB ARG 29 0.163 39.009 21.157 1.00 2.27 ATOM 403 CG ARG 29 0.081 37.660 21.892 1.00 2.27 ATOM 406 CD ARG 29 1.446 37.160 22.373 1.00 2.27 ATOM 409 NE ARG 29 2.279 36.665 21.259 1.00 2.27 ATOM 411 CZ ARG 29 3.489 37.052 20.899 1.00 2.27 ATOM 412 NH1 ARG 29 4.164 36.351 20.037 1.00 2.27 ATOM 415 NH2 ARG 29 4.058 38.115 21.386 1.00 2.27 ATOM 418 C ARG 29 -0.658 40.409 19.168 1.00 2.27 ATOM 419 O ARG 29 -0.494 41.407 19.867 1.00 2.27 ATOM 420 N VAL 30 -0.992 40.492 17.881 1.00 2.08 ATOM 422 CA VAL 30 -1.061 41.763 17.131 1.00 2.08 ATOM 424 CB VAL 30 -0.191 41.734 15.856 1.00 2.08 ATOM 426 CG1 VAL 30 1.295 41.666 16.226 1.00 2.08 ATOM 430 CG2 VAL 30 -0.527 40.563 14.918 1.00 2.08 ATOM 434 C VAL 30 -2.502 42.228 16.905 1.00 2.08 ATOM 435 O VAL 30 -2.903 42.604 15.807 1.00 2.08 ATOM 436 N THR 31 -3.301 42.244 17.972 1.00 2.45 ATOM 438 CA THR 31 -4.646 42.848 18.023 1.00 2.45 ATOM 440 CB THR 31 -4.598 44.386 18.154 1.00 2.45 ATOM 442 CG2 THR 31 -3.782 44.834 19.367 1.00 2.45 ATOM 446 OG1 THR 31 -4.028 45.003 17.023 1.00 2.45 ATOM 448 C THR 31 -5.629 42.361 16.955 1.00 2.45 ATOM 449 O THR 31 -6.358 43.138 16.332 1.00 2.45 ATOM 450 N GLU 32 -5.678 41.037 16.782 1.00 3.02 ATOM 452 CA GLU 32 -6.868 40.308 16.313 1.00 3.02 ATOM 454 CB GLU 32 -7.919 40.263 17.451 1.00 3.02 ATOM 457 CG GLU 32 -7.572 39.286 18.599 1.00 3.02 ATOM 460 CD GLU 32 -6.070 39.239 18.923 1.00 3.02 ATOM 461 OE1 GLU 32 -5.390 38.425 18.253 1.00 3.02 ATOM 462 OE2 GLU 32 -5.579 40.133 19.646 1.00 3.02 ATOM 463 C GLU 32 -7.374 40.799 14.947 1.00 3.02 ATOM 464 O GLU 32 -8.580 40.872 14.695 1.00 3.02 ATOM 465 N ARG 33 -6.441 41.153 14.045 1.00 2.07 ATOM 467 CA ARG 33 -6.726 41.517 12.647 1.00 2.07 ATOM 469 CB ARG 33 -6.785 43.040 12.455 1.00 2.07 ATOM 472 CG ARG 33 -7.975 43.704 13.174 1.00 2.07 ATOM 475 CD ARG 33 -9.362 43.223 12.712 1.00 2.07 ATOM 478 NE ARG 33 -10.438 43.951 13.401 1.00 2.07 ATOM 480 CZ ARG 33 -10.802 43.850 14.668 1.00 2.07 ATOM 481 NH1 ARG 33 -11.645 44.715 15.154 1.00 2.07 ATOM 484 NH2 ARG 33 -10.339 42.927 15.464 1.00 2.07 ATOM 487 C ARG 33 -5.745 40.845 11.647 1.00 2.07 ATOM 488 O ARG 33 -4.521 41.054 11.688 1.00 2.07 ATOM 489 N PRO 34 -6.284 40.084 10.674 1.00 2.29 ATOM 490 CD PRO 34 -7.676 39.666 10.547 1.00 2.29 ATOM 493 CG PRO 34 -7.707 38.561 9.500 1.00 2.29 ATOM 496 CB PRO 34 -6.488 38.847 8.639 1.00 2.29 ATOM 499 CA PRO 34 -5.489 39.470 9.616 1.00 2.29 ATOM 501 C PRO 34 -4.558 40.403 8.854 1.00 2.29 ATOM 502 O PRO 34 -3.489 39.955 8.424 1.00 2.29 ATOM 503 N PHE 35 -4.926 41.692 8.709 1.00 1.96 ATOM 505 CA PHE 35 -3.994 42.670 8.144 1.00 1.96 ATOM 507 CB PHE 35 -4.422 43.382 6.868 1.00 1.96 ATOM 510 CG PHE 35 -3.911 42.713 5.610 1.00 1.96 ATOM 511 CD1 PHE 35 -4.502 41.510 5.184 1.00 1.96 ATOM 513 CE1 PHE 35 -4.010 40.855 4.045 1.00 1.96 ATOM 515 CZ PHE 35 -2.947 41.418 3.318 1.00 1.96 ATOM 517 CE2 PHE 35 -2.323 42.598 3.761 1.00 1.96 ATOM 519 CD2 PHE 35 -2.796 43.231 4.923 1.00 1.96 ATOM 521 C PHE 35 -2.838 43.130 9.018 1.00 1.96 ATOM 522 O PHE 35 -1.768 43.408 8.476 1.00 1.96 ATOM 523 N TRP 36 -2.953 43.043 10.350 1.00 1.79 ATOM 525 CA TRP 36 -1.749 42.986 11.180 1.00 1.79 ATOM 527 CB TRP 36 -2.038 43.097 12.678 1.00 1.79 ATOM 530 CG TRP 36 -2.151 44.492 13.211 1.00 1.79 ATOM 531 CD1 TRP 36 -3.133 44.943 14.018 1.00 1.79 ATOM 533 NE1 TRP 36 -2.869 46.237 14.409 1.00 1.79 ATOM 535 CE2 TRP 36 -1.706 46.710 13.850 1.00 1.79 ATOM 536 CZ2 TRP 36 -1.034 47.937 13.929 1.00 1.79 ATOM 538 CH2 TRP 36 0.200 48.082 13.275 1.00 1.79 ATOM 540 CZ3 TRP 36 0.750 46.995 12.574 1.00 1.79 ATOM 542 CE3 TRP 36 0.050 45.777 12.482 1.00 1.79 ATOM 544 CD2 TRP 36 -1.203 45.603 13.103 1.00 1.79 ATOM 545 C TRP 36 -0.877 41.797 10.859 1.00 1.79 ATOM 546 O TRP 36 0.281 42.066 10.557 1.00 1.79 ATOM 547 N ILE 37 -1.370 40.544 10.842 1.00 1.53 ATOM 549 CA ILE 37 -0.386 39.459 10.554 1.00 1.53 ATOM 551 CB ILE 37 -0.872 38.042 10.890 1.00 1.53 ATOM 553 CG2 ILE 37 -1.760 37.422 9.807 1.00 1.53 ATOM 557 CG1 ILE 37 0.322 37.109 11.175 1.00 1.53 ATOM 560 CD1 ILE 37 1.133 37.481 12.424 1.00 1.53 ATOM 564 C ILE 37 0.289 39.599 9.174 1.00 1.53 ATOM 565 O ILE 37 1.509 39.462 9.047 1.00 1.53 ATOM 566 N SER 38 -0.486 40.019 8.168 1.00 2.34 ATOM 568 CA SER 38 0.034 40.229 6.809 1.00 2.34 ATOM 570 CB SER 38 -1.116 40.471 5.852 1.00 2.34 ATOM 573 OG SER 38 -2.007 39.374 5.867 1.00 2.34 ATOM 575 C SER 38 1.069 41.347 6.688 1.00 2.34 ATOM 576 O SER 38 2.025 41.184 5.925 1.00 2.34 ATOM 577 N SER 39 0.911 42.441 7.450 1.00 2.41 ATOM 579 CA SER 39 2.009 43.389 7.654 1.00 2.41 ATOM 581 CB SER 39 1.568 44.681 8.331 1.00 2.41 ATOM 584 OG SER 39 1.072 44.500 9.636 1.00 2.41 ATOM 586 C SER 39 3.218 42.703 8.288 1.00 2.41 ATOM 587 O SER 39 4.239 42.561 7.620 1.00 2.41 ATOM 588 N PHE 40 3.055 42.146 9.493 1.00 2.15 ATOM 590 CA PHE 40 4.134 41.567 10.287 1.00 2.15 ATOM 592 CB PHE 40 3.609 41.084 11.652 1.00 2.15 ATOM 595 CG PHE 40 3.653 42.132 12.759 1.00 2.15 ATOM 596 CD1 PHE 40 2.671 43.135 12.847 1.00 2.15 ATOM 598 CE1 PHE 40 2.727 44.096 13.876 1.00 2.15 ATOM 600 CZ PHE 40 3.770 44.070 14.814 1.00 2.15 ATOM 602 CE2 PHE 40 4.752 43.071 14.736 1.00 2.15 ATOM 604 CD2 PHE 40 4.687 42.106 13.716 1.00 2.15 ATOM 606 C PHE 40 4.991 40.531 9.555 1.00 2.15 ATOM 607 O PHE 40 6.149 40.441 9.931 1.00 2.15 ATOM 608 N ILE 41 4.531 39.787 8.538 1.00 1.65 ATOM 610 CA ILE 41 5.333 38.665 7.989 1.00 1.65 ATOM 612 CB ILE 41 4.516 37.370 8.229 1.00 1.65 ATOM 614 CG2 ILE 41 4.928 36.216 7.311 1.00 1.65 ATOM 618 CG1 ILE 41 4.587 36.770 9.652 1.00 1.65 ATOM 621 CD1 ILE 41 4.173 37.657 10.816 1.00 1.65 ATOM 625 C ILE 41 5.805 38.787 6.516 1.00 1.65 ATOM 626 O ILE 41 6.720 38.068 6.103 1.00 1.65 ATOM 627 N GLY 42 5.221 39.655 5.684 1.00 4.65 ATOM 629 CA GLY 42 5.599 39.752 4.260 1.00 4.65 ATOM 632 C GLY 42 6.972 40.413 4.039 1.00 4.65 ATOM 633 O GLY 42 7.870 40.336 4.874 1.00 4.65 ATOM 634 N ARG 43 7.160 41.040 2.869 1.00 4.28 ATOM 636 CA ARG 43 8.409 41.706 2.430 1.00 4.28 ATOM 638 CB ARG 43 8.285 42.056 0.929 1.00 4.28 ATOM 641 CG ARG 43 9.580 42.618 0.309 1.00 4.28 ATOM 644 CD ARG 43 9.465 42.878 -1.205 1.00 4.28 ATOM 647 NE ARG 43 8.438 43.891 -1.529 1.00 4.28 ATOM 649 CZ ARG 43 8.431 44.747 -2.540 1.00 4.28 ATOM 650 NH1 ARG 43 7.472 45.619 -2.633 1.00 4.28 ATOM 653 NH2 ARG 43 9.360 44.783 -3.452 1.00 4.28 ATOM 656 C ARG 43 8.819 42.914 3.291 1.00 4.28 ATOM 657 O ARG 43 8.500 44.046 2.940 1.00 4.28 ATOM 658 N SER 44 9.576 42.659 4.358 1.00 4.11 ATOM 660 CA SER 44 10.292 43.653 5.166 1.00 4.11 ATOM 662 CB SER 44 11.099 42.951 6.269 1.00 4.11 ATOM 665 OG SER 44 12.101 42.096 5.751 1.00 4.11 ATOM 667 C SER 44 11.181 44.569 4.305 1.00 4.11 ATOM 668 O SER 44 11.846 44.115 3.368 1.00 4.11 ATOM 669 N LYS 45 11.184 45.872 4.633 1.00 2.77 ATOM 671 CA LYS 45 12.207 46.854 4.235 1.00 2.77 ATOM 673 CB LYS 45 12.227 47.134 2.717 1.00 2.77 ATOM 676 CG LYS 45 13.410 47.982 2.194 1.00 2.77 ATOM 679 CD LYS 45 14.787 47.647 2.797 1.00 2.77 ATOM 682 CE LYS 45 15.940 48.379 2.089 1.00 2.77 ATOM 685 NZ LYS 45 15.853 49.848 2.255 1.00 2.77 ATOM 689 C LYS 45 12.150 48.114 5.098 1.00 2.77 ATOM 690 O LYS 45 12.491 48.021 6.273 1.00 2.77 TER END