####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS288_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS288_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 5 - 23 4.98 13.79 LONGEST_CONTINUOUS_SEGMENT: 19 6 - 24 4.89 12.67 LCS_AVERAGE: 40.86 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 19 - 28 1.71 18.48 LONGEST_CONTINUOUS_SEGMENT: 10 36 - 45 1.89 22.91 LCS_AVERAGE: 19.37 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 9 - 17 0.77 16.03 LCS_AVERAGE: 13.69 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 5 18 0 4 4 4 6 8 9 11 11 13 14 16 17 17 19 21 23 25 25 25 LCS_GDT V 3 V 3 4 6 18 3 4 4 4 6 8 8 11 11 13 14 16 17 17 20 22 24 25 25 25 LCS_GDT Q 4 Q 4 5 6 18 3 4 7 7 7 8 9 11 11 13 14 16 17 17 20 22 24 25 25 26 LCS_GDT G 5 G 5 5 6 19 3 4 7 7 7 8 9 11 11 13 14 16 17 18 20 22 24 25 25 26 LCS_GDT P 6 P 6 5 6 19 3 4 7 7 7 8 9 11 12 14 15 17 18 20 21 24 26 26 27 27 LCS_GDT W 7 W 7 5 6 19 3 4 7 7 7 8 9 11 12 14 15 17 20 21 22 24 26 26 28 30 LCS_GDT V 8 V 8 5 6 19 3 4 7 7 7 8 9 11 12 14 15 17 18 20 21 24 26 26 27 28 LCS_GDT G 9 G 9 9 9 19 6 8 9 9 9 9 9 11 12 13 14 16 17 20 21 24 26 26 28 30 LCS_GDT S 10 S 10 9 9 19 4 8 9 9 9 9 9 11 12 14 15 17 20 21 24 25 26 27 29 33 LCS_GDT S 11 S 11 9 9 19 4 8 9 9 9 9 9 11 12 14 15 17 20 21 24 25 26 28 31 33 LCS_GDT Y 12 Y 12 9 9 19 6 8 9 9 9 9 9 11 12 14 15 17 20 21 24 25 26 27 31 33 LCS_GDT V 13 V 13 9 9 19 6 8 9 9 9 9 9 11 12 14 15 17 20 21 24 25 26 28 31 33 LCS_GDT A 14 A 14 9 9 19 6 8 9 9 9 9 9 11 12 14 15 17 20 21 24 25 26 28 31 33 LCS_GDT E 15 E 15 9 9 19 6 8 9 9 9 9 9 11 12 14 15 17 20 21 24 25 26 28 31 33 LCS_GDT T 16 T 16 9 9 19 6 8 9 9 9 9 9 11 12 13 15 17 20 21 24 25 26 28 31 33 LCS_GDT G 17 G 17 9 9 19 3 7 9 9 9 9 9 11 11 13 14 16 20 21 24 25 26 28 31 33 LCS_GDT Q 18 Q 18 3 4 19 1 3 4 5 6 8 9 11 12 14 15 17 20 21 24 25 26 28 31 33 LCS_GDT N 19 N 19 3 10 19 1 3 4 8 9 9 10 10 11 14 15 17 20 21 24 25 26 28 31 33 LCS_GDT W 20 W 20 8 10 19 0 8 8 8 9 9 10 10 11 11 12 16 17 20 24 25 26 28 31 33 LCS_GDT A 21 A 21 8 10 19 5 8 8 8 9 9 10 10 12 14 15 17 20 21 24 25 26 28 31 33 LCS_GDT S 22 S 22 8 10 19 3 8 8 8 9 9 10 10 11 14 15 17 20 21 22 24 26 26 28 30 LCS_GDT L 23 L 23 8 10 19 5 8 8 8 9 9 10 10 12 14 15 17 20 21 24 25 26 28 31 33 LCS_GDT A 24 A 24 8 10 19 5 8 8 8 9 9 10 10 11 12 15 17 20 21 24 25 26 28 31 33 LCS_GDT A 25 A 25 8 10 17 5 8 8 8 9 9 10 10 11 12 15 17 20 21 24 25 26 27 31 33 LCS_GDT N 26 N 26 8 10 17 5 8 8 8 9 9 10 10 11 12 15 17 20 21 24 25 26 28 31 33 LCS_GDT E 27 E 27 8 10 17 4 8 8 8 9 9 10 10 11 11 12 15 20 21 24 25 26 28 31 33 LCS_GDT L 28 L 28 8 10 17 0 5 8 8 9 9 10 10 11 11 12 15 17 20 24 25 26 28 31 33 LCS_GDT R 29 R 29 4 7 17 0 3 4 6 7 8 9 11 11 12 15 16 20 21 24 25 26 28 31 33 LCS_GDT V 30 V 30 4 7 17 0 3 4 5 7 7 8 11 11 12 13 15 20 21 24 25 26 28 31 33 LCS_GDT T 31 T 31 4 7 17 3 3 4 6 7 8 9 11 12 12 14 15 16 21 24 25 26 28 31 33 LCS_GDT E 32 E 32 4 7 17 3 4 4 6 7 8 9 11 12 12 14 15 15 20 24 25 26 28 31 33 LCS_GDT R 33 R 33 4 7 17 3 4 4 6 7 8 9 11 12 12 14 15 15 15 19 25 26 28 31 33 LCS_GDT P 34 P 34 4 7 17 2 4 4 6 7 8 9 11 12 12 14 15 15 15 19 20 20 25 28 33 LCS_GDT F 35 F 35 4 7 17 3 4 4 6 7 8 10 11 12 12 14 15 15 16 19 25 26 28 31 33 LCS_GDT W 36 W 36 5 10 17 3 5 7 7 9 10 10 11 11 12 14 15 15 18 24 25 26 28 31 33 LCS_GDT I 37 I 37 5 10 17 4 5 7 7 9 10 10 11 12 12 14 15 15 15 19 20 22 26 31 33 LCS_GDT S 38 S 38 5 10 17 4 4 7 7 9 10 10 11 12 12 14 15 15 16 19 20 22 28 31 33 LCS_GDT S 39 S 39 5 10 17 4 5 7 7 9 10 10 11 12 12 14 15 15 18 24 25 26 28 31 33 LCS_GDT F 40 F 40 5 10 17 4 4 6 7 9 10 10 11 12 12 14 15 15 16 19 22 24 28 31 33 LCS_GDT I 41 I 41 5 10 17 4 4 6 7 8 10 10 11 12 12 14 15 15 16 19 20 23 28 31 33 LCS_GDT G 42 G 42 4 10 17 4 4 6 7 9 10 10 11 12 12 14 15 15 16 19 20 23 28 31 33 LCS_GDT R 43 R 43 4 10 17 4 4 7 7 9 10 10 11 12 12 14 15 15 15 19 22 24 28 31 33 LCS_GDT S 44 S 44 4 10 17 4 5 7 7 9 10 10 11 11 12 14 15 15 15 15 16 16 21 22 28 LCS_GDT K 45 K 45 3 10 17 0 5 7 7 9 10 10 11 11 12 14 15 15 15 15 15 16 16 17 17 LCS_AVERAGE LCS_A: 24.64 ( 13.69 19.37 40.86 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 9 9 9 10 10 11 12 14 15 17 20 21 24 25 26 28 31 33 GDT PERCENT_AT 13.64 18.18 20.45 20.45 20.45 22.73 22.73 25.00 27.27 31.82 34.09 38.64 45.45 47.73 54.55 56.82 59.09 63.64 70.45 75.00 GDT RMS_LOCAL 0.32 0.67 0.77 0.77 0.77 1.89 1.71 2.42 3.19 3.89 4.08 4.51 5.12 5.39 6.22 6.41 6.16 7.20 7.44 7.61 GDT RMS_ALL_AT 16.03 16.10 16.03 16.03 16.03 22.91 18.48 21.05 20.35 12.77 13.23 13.59 12.76 12.10 11.75 11.92 11.73 12.20 12.17 12.11 # Checking swapping # possible swapping detected: Y 12 Y 12 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 37.754 0 0.037 0.041 40.262 0.000 0.000 - LGA V 3 V 3 35.670 0 0.027 0.162 37.677 0.000 0.000 33.658 LGA Q 4 Q 4 40.324 0 0.057 1.234 44.509 0.000 0.000 43.090 LGA G 5 G 5 40.640 0 0.320 0.320 40.664 0.000 0.000 - LGA P 6 P 6 37.723 0 0.685 0.581 41.019 0.000 0.000 39.922 LGA W 7 W 7 32.390 0 0.169 0.268 34.248 0.000 0.000 28.973 LGA V 8 V 8 31.755 0 0.662 0.629 35.564 0.000 0.000 32.921 LGA G 9 G 9 27.753 0 0.555 0.555 29.386 0.000 0.000 - LGA S 10 S 10 28.844 0 0.078 0.665 32.478 0.000 0.000 32.478 LGA S 11 S 11 25.212 0 0.067 0.715 26.732 0.000 0.000 25.503 LGA Y 12 Y 12 21.644 0 0.043 1.310 23.218 0.000 0.000 22.533 LGA V 13 V 13 23.950 0 0.122 0.940 26.159 0.000 0.000 25.317 LGA A 14 A 14 26.649 0 0.217 0.214 28.477 0.000 0.000 - LGA E 15 E 15 22.140 0 0.075 1.212 23.649 0.000 0.000 21.860 LGA T 16 T 16 18.750 0 0.060 0.121 19.949 0.000 0.000 18.745 LGA G 17 G 17 22.392 0 0.678 0.678 22.392 0.000 0.000 - LGA Q 18 Q 18 22.535 0 0.668 0.513 24.102 0.000 0.000 22.629 LGA N 19 N 19 21.726 0 0.653 1.232 25.343 0.000 0.000 24.265 LGA W 20 W 20 16.116 0 0.577 1.099 17.884 0.000 0.000 16.768 LGA A 21 A 21 18.748 0 0.671 0.634 19.865 0.000 0.000 - LGA S 22 S 22 18.253 0 0.114 0.668 19.076 0.000 0.000 19.076 LGA L 23 L 23 16.648 0 0.100 0.112 17.306 0.000 0.000 16.543 LGA A 24 A 24 17.375 0 0.027 0.033 18.291 0.000 0.000 - LGA A 25 A 25 18.600 0 0.057 0.054 19.510 0.000 0.000 - LGA N 26 N 26 18.026 0 0.028 0.093 19.163 0.000 0.000 17.595 LGA E 27 E 27 19.136 0 0.595 0.508 22.874 0.000 0.000 22.847 LGA L 28 L 28 18.144 0 0.595 1.206 23.960 0.000 0.000 21.886 LGA R 29 R 29 14.904 0 0.593 1.109 20.836 0.000 0.000 19.129 LGA V 30 V 30 12.100 0 0.107 0.192 14.957 0.000 0.000 11.974 LGA T 31 T 31 10.550 0 0.669 0.578 11.670 0.000 0.000 9.503 LGA E 32 E 32 9.731 0 0.123 0.837 15.310 0.000 0.000 15.310 LGA R 33 R 33 10.177 0 0.656 1.363 15.334 0.000 0.000 15.334 LGA P 34 P 34 9.589 0 0.627 0.603 10.431 0.000 0.000 10.431 LGA F 35 F 35 4.272 0 0.639 1.515 12.769 9.545 3.636 12.769 LGA W 36 W 36 1.818 0 0.575 1.349 10.686 62.273 18.182 9.306 LGA I 37 I 37 1.636 0 0.095 0.427 4.619 65.909 39.545 4.619 LGA S 38 S 38 2.089 0 0.116 0.137 2.963 44.545 38.788 2.901 LGA S 39 S 39 2.162 0 0.043 0.559 3.079 36.364 36.970 2.364 LGA F 40 F 40 2.245 0 0.110 0.993 4.935 35.909 24.793 4.935 LGA I 41 I 41 2.389 0 0.615 0.603 3.663 31.364 32.045 2.645 LGA G 42 G 42 2.897 0 0.282 0.282 3.799 23.182 23.182 - LGA R 43 R 43 1.006 0 0.031 0.992 3.833 69.545 49.752 3.833 LGA S 44 S 44 2.082 0 0.715 0.631 4.106 42.273 33.636 4.106 LGA K 45 K 45 2.607 0 0.044 0.211 6.508 23.636 16.768 6.508 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.745 10.555 11.219 10.103 7.211 3.221 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 11 2.42 30.114 26.493 0.436 LGA_LOCAL RMSD: 2.422 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 21.048 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.745 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.062170 * X + 0.824874 * Y + 0.561888 * Z + -14.781870 Y_new = -0.997956 * X + 0.043037 * Y + 0.047239 * Z + 28.791210 Z_new = 0.014784 * X + -0.563676 * Y + 0.825864 * Z + 13.490993 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.508579 -0.014785 -0.598904 [DEG: -86.4352 -0.8471 -34.3147 ] ZXZ: 1.654670 0.599064 3.115371 [DEG: 94.8056 34.3238 178.4976 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS288_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS288_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 11 2.42 26.493 10.75 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS288_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 REFINED PARENT N/A ATOM 9 N ALA 2 -23.685 20.825 18.294 1.00 14.00 ATOM 10 CA ALA 2 -23.161 20.404 19.603 1.00 14.00 ATOM 11 C ALA 2 -22.187 19.210 19.504 1.00 14.00 ATOM 12 O ALA 2 -22.256 18.431 18.558 1.00 14.00 ATOM 13 CB ALA 2 -24.371 20.081 20.494 1.00 14.20 ATOM 14 N VAL 3 -21.304 19.001 20.486 1.00 14.70 ATOM 15 CA VAL 3 -20.472 17.780 20.582 1.00 14.70 ATOM 16 C VAL 3 -20.094 17.446 22.035 1.00 14.70 ATOM 17 O VAL 3 -19.773 18.337 22.823 1.00 14.70 ATOM 18 CB VAL 3 -19.166 17.855 19.745 1.00 14.40 ATOM 19 CG1 VAL 3 -18.610 16.443 19.501 1.00 14.40 ATOM 20 CG2 VAL 3 -19.299 18.473 18.347 1.00 14.40 ATOM 21 N GLN 4 -20.100 16.152 22.361 1.00 16.40 ATOM 22 CA GLN 4 -19.537 15.552 23.578 1.00 16.40 ATOM 23 C GLN 4 -18.647 14.374 23.125 1.00 16.40 ATOM 24 O GLN 4 -19.073 13.566 22.296 1.00 16.40 ATOM 25 CB GLN 4 -20.675 15.143 24.536 1.00 17.80 ATOM 26 CG GLN 4 -20.204 14.518 25.866 1.00 17.80 ATOM 27 CD GLN 4 -19.571 15.504 26.855 1.00 17.80 ATOM 28 OE1 GLN 4 -19.731 16.716 26.786 1.00 17.80 ATOM 29 NE2 GLN 4 -18.827 15.021 27.829 1.00 17.80 ATOM 30 N GLY 5 -17.410 14.287 23.628 1.00 16.80 ATOM 31 CA GLY 5 -16.365 13.386 23.110 1.00 16.80 ATOM 32 C GLY 5 -15.270 14.206 22.403 1.00 16.80 ATOM 33 O GLY 5 -14.515 14.885 23.104 1.00 16.80 ATOM 34 N PRO 6 -15.154 14.189 21.057 1.00 16.50 ATOM 35 CA PRO 6 -14.297 15.129 20.321 1.00 16.50 ATOM 36 C PRO 6 -14.859 16.567 20.382 1.00 16.50 ATOM 37 O PRO 6 -15.934 16.800 20.934 1.00 16.50 ATOM 38 CB PRO 6 -14.218 14.569 18.899 1.00 17.10 ATOM 39 CG PRO 6 -15.555 13.852 18.721 1.00 17.10 ATOM 40 CD PRO 6 -15.889 13.343 20.125 1.00 17.10 ATOM 41 N TRP 7 -14.116 17.555 19.861 1.00 14.50 ATOM 42 CA TRP 7 -14.423 18.997 20.005 1.00 14.50 ATOM 43 C TRP 7 -14.674 19.424 21.469 1.00 14.50 ATOM 44 O TRP 7 -15.430 20.348 21.766 1.00 14.50 ATOM 45 CB TRP 7 -15.498 19.449 19.006 1.00 14.20 ATOM 46 CG TRP 7 -15.153 19.186 17.571 1.00 14.20 ATOM 47 CD1 TRP 7 -15.353 18.009 16.936 1.00 14.20 ATOM 48 CD2 TRP 7 -14.442 20.041 16.613 1.00 14.20 ATOM 49 NE1 TRP 7 -14.780 18.064 15.683 1.00 14.20 ATOM 50 CE2 TRP 7 -14.217 19.286 15.425 1.00 14.20 ATOM 51 CE3 TRP 7 -13.943 21.361 16.617 1.00 14.20 ATOM 52 CZ2 TRP 7 -13.525 19.784 14.314 1.00 14.20 ATOM 53 CZ3 TRP 7 -13.234 21.871 15.507 1.00 14.20 ATOM 54 CH2 TRP 7 -13.018 21.088 14.363 1.00 14.20 ATOM 55 N VAL 8 -13.985 18.740 22.388 1.00 14.90 ATOM 56 CA VAL 8 -13.843 19.043 23.817 1.00 14.90 ATOM 57 C VAL 8 -12.346 19.149 24.106 1.00 14.90 ATOM 58 O VAL 8 -11.560 18.306 23.668 1.00 14.90 ATOM 59 CB VAL 8 -14.502 17.967 24.707 1.00 15.30 ATOM 60 CG1 VAL 8 -14.217 18.184 26.202 1.00 15.30 ATOM 61 CG2 VAL 8 -16.025 17.940 24.525 1.00 15.30 ATOM 62 N GLY 9 -11.949 20.181 24.847 1.00 14.40 ATOM 63 CA GLY 9 -10.576 20.348 25.311 1.00 14.40 ATOM 64 C GLY 9 -10.472 21.538 26.243 1.00 14.40 ATOM 65 O GLY 9 -10.879 22.637 25.869 1.00 14.40 ATOM 66 N SER 10 -9.921 21.330 27.440 1.00 15.70 ATOM 67 CA SER 10 -9.808 22.347 28.502 1.00 15.70 ATOM 68 C SER 10 -9.181 23.659 27.994 1.00 15.70 ATOM 69 O SER 10 -9.622 24.755 28.348 1.00 15.70 ATOM 70 CB SER 10 -8.988 21.746 29.650 1.00 16.40 ATOM 71 OG SER 10 -8.871 22.647 30.739 1.00 16.40 ATOM 72 N SER 11 -8.221 23.539 27.070 1.00 16.20 ATOM 73 CA SER 11 -7.504 24.643 26.424 1.00 16.20 ATOM 74 C SER 11 -8.385 25.578 25.585 1.00 16.20 ATOM 75 O SER 11 -8.103 26.771 25.541 1.00 16.20 ATOM 76 CB SER 11 -6.427 24.070 25.496 1.00 16.90 ATOM 77 OG SER 11 -5.678 23.059 26.151 1.00 16.90 ATOM 78 N TYR 12 -9.431 25.066 24.913 1.00 13.60 ATOM 79 CA TYR 12 -10.357 25.889 24.110 1.00 13.60 ATOM 80 C TYR 12 -11.701 26.121 24.812 1.00 13.60 ATOM 81 O TYR 12 -12.235 27.224 24.739 1.00 13.60 ATOM 82 CB TYR 12 -10.540 25.307 22.689 1.00 13.20 ATOM 83 CG TYR 12 -11.884 24.647 22.452 1.00 13.20 ATOM 84 CD1 TYR 12 -12.986 25.437 22.076 1.00 13.20 ATOM 85 CD2 TYR 12 -12.071 23.292 22.760 1.00 13.20 ATOM 86 CE1 TYR 12 -14.286 24.905 22.090 1.00 13.20 ATOM 87 CE2 TYR 12 -13.363 22.741 22.722 1.00 13.20 ATOM 88 CZ TYR 12 -14.475 23.551 22.421 1.00 13.20 ATOM 89 OH TYR 12 -15.724 23.027 22.486 1.00 13.20 ATOM 90 N VAL 13 -12.271 25.125 25.498 1.00 12.50 ATOM 91 CA VAL 13 -13.656 25.189 26.013 1.00 12.50 ATOM 92 C VAL 13 -13.829 26.229 27.137 1.00 12.50 ATOM 93 O VAL 13 -14.929 26.742 27.346 1.00 12.50 ATOM 94 CB VAL 13 -14.127 23.770 26.403 1.00 12.60 ATOM 95 CG1 VAL 13 -13.586 23.292 27.752 1.00 12.60 ATOM 96 CG2 VAL 13 -15.650 23.642 26.426 1.00 12.60 ATOM 97 N ALA 14 -12.729 26.589 27.811 1.00 14.50 ATOM 98 CA ALA 14 -12.643 27.667 28.805 1.00 14.50 ATOM 99 C ALA 14 -11.970 28.963 28.281 1.00 14.50 ATOM 100 O ALA 14 -11.852 29.939 29.028 1.00 14.50 ATOM 101 CB ALA 14 -11.912 27.108 30.031 1.00 15.00 ATOM 102 N GLU 15 -11.512 28.989 27.021 1.00 14.40 ATOM 103 CA GLU 15 -10.817 30.148 26.436 1.00 14.40 ATOM 104 C GLU 15 -11.482 30.736 25.183 1.00 14.40 ATOM 105 O GLU 15 -11.280 31.913 24.932 1.00 14.40 ATOM 106 CB GLU 15 -9.341 29.848 26.168 1.00 15.50 ATOM 107 CG GLU 15 -8.518 29.524 27.425 1.00 15.50 ATOM 108 CD GLU 15 -8.467 30.680 28.450 1.00 15.50 ATOM 109 OE1 GLU 15 -8.383 31.869 28.055 1.00 15.50 ATOM 110 OE2 GLU 15 -8.465 30.399 29.675 1.00 15.50 ATOM 111 N THR 16 -12.281 29.984 24.414 1.00 11.70 ATOM 112 CA THR 16 -13.157 30.531 23.348 1.00 11.70 ATOM 113 C THR 16 -14.477 31.059 23.911 1.00 11.70 ATOM 114 O THR 16 -15.102 31.941 23.322 1.00 11.70 ATOM 115 CB THR 16 -13.498 29.502 22.270 1.00 11.20 ATOM 116 OG1 THR 16 -14.109 28.362 22.828 1.00 11.20 ATOM 117 CG2 THR 16 -12.283 29.065 21.474 1.00 11.20 ATOM 118 N GLY 17 -14.926 30.474 25.027 1.00 11.80 ATOM 119 CA GLY 17 -15.997 30.970 25.889 1.00 11.80 ATOM 120 C GLY 17 -15.369 31.607 27.133 1.00 11.80 ATOM 121 O GLY 17 -14.269 31.220 27.529 1.00 11.80 ATOM 122 N GLN 18 -16.041 32.586 27.752 1.00 14.20 ATOM 123 CA GLN 18 -15.563 33.421 28.884 1.00 14.20 ATOM 124 C GLN 18 -14.347 34.330 28.581 1.00 14.20 ATOM 125 O GLN 18 -14.216 35.412 29.154 1.00 14.20 ATOM 126 CB GLN 18 -15.287 32.561 30.139 1.00 15.40 ATOM 127 CG GLN 18 -16.304 31.446 30.452 1.00 15.40 ATOM 128 CD GLN 18 -17.744 31.921 30.661 1.00 15.40 ATOM 129 OE1 GLN 18 -18.039 33.086 30.900 1.00 15.40 ATOM 130 NE2 GLN 18 -18.707 31.025 30.586 1.00 15.40 ATOM 131 N ASN 19 -13.484 33.906 27.660 1.00 14.30 ATOM 132 CA ASN 19 -12.365 34.618 27.046 1.00 14.30 ATOM 133 C ASN 19 -12.508 34.489 25.512 1.00 14.30 ATOM 134 O ASN 19 -13.363 33.728 25.050 1.00 14.30 ATOM 135 CB ASN 19 -11.040 34.051 27.586 1.00 14.80 ATOM 136 CG ASN 19 -10.997 33.979 29.104 1.00 14.80 ATOM 137 OD1 ASN 19 -10.708 34.957 29.782 1.00 14.80 ATOM 138 ND2 ASN 19 -11.306 32.844 29.702 1.00 14.80 ATOM 139 N TRP 20 -11.789 35.307 24.723 1.00 11.70 ATOM 140 CA TRP 20 -11.965 35.452 23.247 1.00 11.70 ATOM 141 C TRP 20 -13.434 35.755 22.819 1.00 11.70 ATOM 142 O TRP 20 -13.811 35.749 21.650 1.00 11.70 ATOM 143 CB TRP 20 -11.280 34.283 22.494 1.00 10.20 ATOM 144 CG TRP 20 -9.897 33.899 22.972 1.00 10.20 ATOM 145 CD1 TRP 20 -9.020 34.727 23.585 1.00 10.20 ATOM 146 CD2 TRP 20 -9.213 32.598 22.928 1.00 10.20 ATOM 147 NE1 TRP 20 -7.930 34.017 24.041 1.00 10.20 ATOM 148 CE2 TRP 20 -7.992 32.694 23.665 1.00 10.20 ATOM 149 CE3 TRP 20 -9.503 31.337 22.359 1.00 10.20 ATOM 150 CZ2 TRP 20 -7.128 31.600 23.848 1.00 10.20 ATOM 151 CZ3 TRP 20 -8.637 30.235 22.518 1.00 10.20 ATOM 152 CH2 TRP 20 -7.453 30.363 23.266 1.00 10.20 ATOM 153 N ALA 21 -14.241 36.096 23.824 1.00 12.40 ATOM 154 CA ALA 21 -15.681 36.277 23.934 1.00 12.40 ATOM 155 C ALA 21 -15.888 37.059 25.241 1.00 12.40 ATOM 156 O ALA 21 -15.055 36.943 26.144 1.00 12.40 ATOM 157 CB ALA 21 -16.356 34.907 24.038 1.00 12.50 ATOM 158 N SER 22 -16.956 37.854 25.358 1.00 14.90 ATOM 159 CA SER 22 -17.161 38.867 26.424 1.00 14.90 ATOM 160 C SER 22 -16.101 39.983 26.373 1.00 14.90 ATOM 161 O SER 22 -16.448 41.136 26.142 1.00 14.90 ATOM 162 CB SER 22 -17.309 38.241 27.821 1.00 15.30 ATOM 163 OG SER 22 -18.409 37.340 27.851 1.00 15.30 ATOM 164 N LEU 23 -14.809 39.642 26.439 1.00 14.10 ATOM 165 CA LEU 23 -13.675 40.534 26.155 1.00 14.10 ATOM 166 C LEU 23 -13.798 41.126 24.734 1.00 14.10 ATOM 167 O LEU 23 -13.768 42.340 24.544 1.00 14.10 ATOM 168 CB LEU 23 -12.358 39.731 26.284 1.00 14.10 ATOM 169 CG LEU 23 -12.080 39.063 27.646 1.00 14.10 ATOM 170 CD1 LEU 23 -10.765 38.289 27.569 1.00 14.10 ATOM 171 CD2 LEU 23 -11.968 40.078 28.781 1.00 14.10 ATOM 172 N ALA 24 -14.033 40.249 23.749 1.00 12.40 ATOM 173 CA ALA 24 -14.236 40.603 22.341 1.00 12.40 ATOM 174 C ALA 24 -15.549 41.373 22.094 1.00 12.40 ATOM 175 O ALA 24 -15.598 42.289 21.275 1.00 12.40 ATOM 176 CB ALA 24 -14.221 39.297 21.543 1.00 12.10 ATOM 177 N ALA 25 -16.620 41.021 22.819 1.00 14.50 ATOM 178 CA ALA 25 -17.911 41.709 22.721 1.00 14.50 ATOM 179 C ALA 25 -17.857 43.137 23.306 1.00 14.50 ATOM 180 O ALA 25 -18.495 44.050 22.773 1.00 14.50 ATOM 181 CB ALA 25 -18.973 40.848 23.417 1.00 14.70 ATOM 182 N ASN 26 -17.081 43.344 24.378 1.00 16.10 ATOM 183 CA ASN 26 -16.871 44.653 25.007 1.00 16.10 ATOM 184 C ASN 26 -15.907 45.558 24.209 1.00 16.10 ATOM 185 O ASN 26 -16.119 46.770 24.154 1.00 16.10 ATOM 186 CB ASN 26 -16.376 44.447 26.454 1.00 16.80 ATOM 187 CG ASN 26 -17.409 43.839 27.398 1.00 16.80 ATOM 188 OD1 ASN 26 -18.591 43.699 27.103 1.00 16.80 ATOM 189 ND2 ASN 26 -17.001 43.489 28.599 1.00 16.80 ATOM 190 N GLU 27 -14.870 44.996 23.574 1.00 14.90 ATOM 191 CA GLU 27 -13.864 45.732 22.789 1.00 14.90 ATOM 192 C GLU 27 -13.577 45.063 21.432 1.00 14.90 ATOM 193 O GLU 27 -12.944 44.005 21.372 1.00 14.90 ATOM 194 CB GLU 27 -12.561 45.876 23.600 1.00 15.50 ATOM 195 CG GLU 27 -12.634 46.911 24.735 1.00 15.50 ATOM 196 CD GLU 27 -12.859 48.361 24.250 1.00 15.50 ATOM 197 OE1 GLU 27 -12.483 48.702 23.099 1.00 15.50 ATOM 198 OE2 GLU 27 -13.377 49.188 25.039 1.00 15.50 ATOM 199 N LEU 28 -14.001 45.724 20.344 1.00 12.80 ATOM 200 CA LEU 28 -13.873 45.265 18.951 1.00 12.80 ATOM 201 C LEU 28 -13.468 46.408 17.996 1.00 12.80 ATOM 202 O LEU 28 -13.991 47.520 18.091 1.00 12.80 ATOM 203 CB LEU 28 -15.179 44.572 18.505 1.00 12.40 ATOM 204 CG LEU 28 -16.439 45.473 18.475 1.00 12.40 ATOM 205 CD1 LEU 28 -16.790 45.915 17.050 1.00 12.40 ATOM 206 CD2 LEU 28 -17.661 44.749 19.044 1.00 12.40 ATOM 207 N ARG 29 -12.553 46.110 17.064 1.00 12.40 ATOM 208 CA ARG 29 -11.996 46.996 16.011 1.00 12.40 ATOM 209 C ARG 29 -11.701 46.177 14.740 1.00 12.40 ATOM 210 O ARG 29 -11.606 44.954 14.818 1.00 12.40 ATOM 211 CB ARG 29 -10.732 47.698 16.564 1.00 13.90 ATOM 212 CG ARG 29 -11.040 48.971 17.369 1.00 13.90 ATOM 213 CD ARG 29 -9.810 49.462 18.149 1.00 13.90 ATOM 214 NE ARG 29 -10.178 50.479 19.160 1.00 13.90 ATOM 215 CZ ARG 29 -10.755 50.268 20.333 1.00 13.90 ATOM 216 NH1 ARG 29 -11.043 51.259 21.124 1.00 13.90 ATOM 217 NH2 ARG 29 -11.067 49.077 20.757 1.00 13.90 ATOM 218 N VAL 30 -11.575 46.805 13.565 1.00 10.30 ATOM 219 CA VAL 30 -11.432 46.111 12.254 1.00 10.30 ATOM 220 C VAL 30 -10.522 46.894 11.286 1.00 10.30 ATOM 221 O VAL 30 -10.620 48.121 11.217 1.00 10.30 ATOM 222 CB VAL 30 -12.816 45.851 11.601 1.00 10.40 ATOM 223 CG1 VAL 30 -12.731 44.977 10.342 1.00 10.40 ATOM 224 CG2 VAL 30 -13.820 45.148 12.530 1.00 10.40 ATOM 225 N THR 31 -9.663 46.204 10.521 1.00 9.00 ATOM 226 CA THR 31 -8.728 46.768 9.514 1.00 9.00 ATOM 227 C THR 31 -8.563 45.875 8.261 1.00 9.00 ATOM 228 O THR 31 -9.153 44.798 8.148 1.00 9.00 ATOM 229 CB THR 31 -7.341 47.078 10.119 1.00 9.10 ATOM 230 OG1 THR 31 -6.731 45.902 10.602 1.00 9.10 ATOM 231 CG2 THR 31 -7.366 48.119 11.238 1.00 9.10 ATOM 232 N GLU 32 -7.811 46.372 7.268 1.00 8.50 ATOM 233 CA GLU 32 -7.668 45.814 5.906 1.00 8.50 ATOM 234 C GLU 32 -6.347 45.034 5.680 1.00 8.50 ATOM 235 O GLU 32 -5.455 45.029 6.532 1.00 8.50 ATOM 236 CB GLU 32 -7.806 46.974 4.897 1.00 9.30 ATOM 237 CG GLU 32 -9.163 47.698 4.995 1.00 9.30 ATOM 238 CD GLU 32 -9.341 48.843 3.975 1.00 9.30 ATOM 239 OE1 GLU 32 -8.375 49.233 3.272 1.00 9.30 ATOM 240 OE2 GLU 32 -10.470 49.382 3.877 1.00 9.30 ATOM 241 N ARG 33 -6.183 44.397 4.506 1.00 8.20 ATOM 242 CA ARG 33 -5.020 43.539 4.163 1.00 8.20 ATOM 243 C ARG 33 -3.629 44.173 4.397 1.00 8.20 ATOM 244 O ARG 33 -2.757 43.454 4.889 1.00 8.20 ATOM 245 CB ARG 33 -5.138 43.003 2.718 1.00 9.30 ATOM 246 CG ARG 33 -6.225 41.926 2.562 1.00 9.30 ATOM 247 CD ARG 33 -6.255 41.370 1.129 1.00 9.30 ATOM 248 NE ARG 33 -7.277 40.309 0.991 1.00 9.30 ATOM 249 CZ ARG 33 -7.090 38.999 0.943 1.00 9.30 ATOM 250 NH1 ARG 33 -8.103 38.182 0.946 1.00 9.30 ATOM 251 NH2 ARG 33 -5.907 38.456 0.893 1.00 9.30 ATOM 252 N PRO 34 -3.388 45.478 4.143 1.00 8.50 ATOM 253 CA PRO 34 -2.096 46.113 4.442 1.00 8.50 ATOM 254 C PRO 34 -1.735 46.146 5.938 1.00 8.50 ATOM 255 O PRO 34 -0.553 46.094 6.279 1.00 8.50 ATOM 256 CB PRO 34 -2.185 47.528 3.860 1.00 9.20 ATOM 257 CG PRO 34 -3.203 47.373 2.733 1.00 9.20 ATOM 258 CD PRO 34 -4.197 46.389 3.343 1.00 9.20 ATOM 259 N PHE 35 -2.732 46.192 6.835 1.00 7.50 ATOM 260 CA PHE 35 -2.527 46.063 8.287 1.00 7.50 ATOM 261 C PHE 35 -2.275 44.606 8.707 1.00 7.50 ATOM 262 O PHE 35 -1.510 44.366 9.643 1.00 7.50 ATOM 263 CB PHE 35 -3.740 46.618 9.048 1.00 8.50 ATOM 264 CG PHE 35 -3.924 48.123 8.975 1.00 8.50 ATOM 265 CD1 PHE 35 -4.596 48.713 7.886 1.00 8.50 ATOM 266 CD2 PHE 35 -3.449 48.937 10.023 1.00 8.50 ATOM 267 CE1 PHE 35 -4.792 50.106 7.849 1.00 8.50 ATOM 268 CE2 PHE 35 -3.647 50.329 9.985 1.00 8.50 ATOM 269 CZ PHE 35 -4.318 50.914 8.899 1.00 8.50 ATOM 270 N TRP 36 -2.884 43.631 8.020 1.00 6.10 ATOM 271 CA TRP 36 -2.621 42.205 8.247 1.00 6.10 ATOM 272 C TRP 36 -1.175 41.819 7.923 1.00 6.10 ATOM 273 O TRP 36 -0.484 41.313 8.802 1.00 6.10 ATOM 274 CB TRP 36 -3.600 41.318 7.454 1.00 6.50 ATOM 275 CG TRP 36 -3.094 39.942 7.106 1.00 6.50 ATOM 276 CD1 TRP 36 -2.574 39.046 7.977 1.00 6.50 ATOM 277 CD2 TRP 36 -2.959 39.328 5.784 1.00 6.50 ATOM 278 NE1 TRP 36 -2.131 37.929 7.293 1.00 6.50 ATOM 279 CE2 TRP 36 -2.345 38.048 5.938 1.00 6.50 ATOM 280 CE3 TRP 36 -3.271 39.730 4.466 1.00 6.50 ATOM 281 CZ2 TRP 36 -2.065 37.208 4.850 1.00 6.50 ATOM 282 CZ3 TRP 36 -2.998 38.894 3.365 1.00 6.50 ATOM 283 CH2 TRP 36 -2.401 37.634 3.553 1.00 6.50 ATOM 284 N ILE 37 -0.699 42.047 6.693 1.00 6.70 ATOM 285 CA ILE 37 0.575 41.463 6.237 1.00 6.70 ATOM 286 C ILE 37 1.795 41.905 7.067 1.00 6.70 ATOM 287 O ILE 37 2.645 41.077 7.401 1.00 6.70 ATOM 288 CB ILE 37 0.749 41.670 4.715 1.00 7.50 ATOM 289 CG1 ILE 37 1.916 40.850 4.121 1.00 7.50 ATOM 290 CG2 ILE 37 0.950 43.149 4.341 1.00 7.50 ATOM 291 CD1 ILE 37 1.727 39.332 4.245 1.00 7.50 ATOM 292 N SER 38 1.854 43.172 7.490 1.00 6.90 ATOM 293 CA SER 38 2.900 43.671 8.398 1.00 6.90 ATOM 294 C SER 38 2.749 43.109 9.819 1.00 6.90 ATOM 295 O SER 38 3.742 42.719 10.432 1.00 6.90 ATOM 296 CB SER 38 2.889 45.203 8.420 1.00 7.40 ATOM 297 OG SER 38 1.641 45.699 8.883 1.00 7.40 ATOM 298 N SER 39 1.518 42.989 10.325 1.00 6.00 ATOM 299 CA SER 39 1.210 42.392 11.635 1.00 6.00 ATOM 300 C SER 39 1.381 40.863 11.678 1.00 6.00 ATOM 301 O SER 39 1.504 40.281 12.757 1.00 6.00 ATOM 302 CB SER 39 -0.202 42.815 12.042 1.00 6.10 ATOM 303 OG SER 39 -0.477 42.421 13.374 1.00 6.10 ATOM 304 N PHE 40 1.412 40.211 10.514 1.00 5.90 ATOM 305 CA PHE 40 1.717 38.793 10.335 1.00 5.90 ATOM 306 C PHE 40 3.234 38.538 10.272 1.00 5.90 ATOM 307 O PHE 40 3.745 37.681 10.989 1.00 5.90 ATOM 308 CB PHE 40 0.980 38.298 9.080 1.00 6.30 ATOM 309 CG PHE 40 1.198 36.842 8.714 1.00 6.30 ATOM 310 CD1 PHE 40 0.649 35.820 9.512 1.00 6.30 ATOM 311 CD2 PHE 40 1.927 36.500 7.557 1.00 6.30 ATOM 312 CE1 PHE 40 0.857 34.469 9.179 1.00 6.30 ATOM 313 CE2 PHE 40 2.119 35.150 7.213 1.00 6.30 ATOM 314 CZ PHE 40 1.591 34.133 8.028 1.00 6.30 ATOM 315 N ILE 41 3.978 39.295 9.456 1.00 7.00 ATOM 316 CA ILE 41 5.434 39.109 9.285 1.00 7.00 ATOM 317 C ILE 41 6.248 39.697 10.461 1.00 7.00 ATOM 318 O ILE 41 7.244 39.107 10.885 1.00 7.00 ATOM 319 CB ILE 41 5.865 39.669 7.903 1.00 7.70 ATOM 320 CG1 ILE 41 5.225 38.815 6.778 1.00 7.70 ATOM 321 CG2 ILE 41 7.398 39.706 7.736 1.00 7.70 ATOM 322 CD1 ILE 41 5.467 39.327 5.351 1.00 7.70 ATOM 323 N GLY 42 5.832 40.844 11.010 1.00 7.30 ATOM 324 CA GLY 42 6.590 41.662 11.972 1.00 7.30 ATOM 325 C GLY 42 6.343 41.377 13.461 1.00 7.30 ATOM 326 O GLY 42 6.064 42.313 14.215 1.00 7.30 ATOM 327 N ARG 43 6.432 40.110 13.897 1.00 6.60 ATOM 328 CA ARG 43 6.304 39.674 15.314 1.00 6.60 ATOM 329 C ARG 43 7.527 38.843 15.764 1.00 6.60 ATOM 330 O ARG 43 8.269 38.323 14.928 1.00 6.60 ATOM 331 CB ARG 43 4.943 38.966 15.529 1.00 7.60 ATOM 332 CG ARG 43 3.707 39.770 15.061 1.00 7.60 ATOM 333 CD ARG 43 3.472 41.072 15.839 1.00 7.60 ATOM 334 NE ARG 43 2.497 41.965 15.173 1.00 7.60 ATOM 335 CZ ARG 43 2.514 43.290 15.166 1.00 7.60 ATOM 336 NH1 ARG 43 1.471 43.964 14.776 1.00 7.60 ATOM 337 NH2 ARG 43 3.558 43.976 15.534 1.00 7.60 ATOM 338 N SER 44 7.762 38.736 17.079 1.00 7.10 ATOM 339 CA SER 44 9.020 38.209 17.667 1.00 7.10 ATOM 340 C SER 44 9.151 36.678 17.782 1.00 7.10 ATOM 341 O SER 44 10.249 36.187 18.066 1.00 7.10 ATOM 342 CB SER 44 9.264 38.847 19.044 1.00 7.30 ATOM 343 OG SER 44 9.483 40.247 18.925 1.00 7.30 ATOM 344 N LYS 45 8.069 35.915 17.570 1.00 6.60 ATOM 345 CA LYS 45 8.053 34.439 17.433 1.00 6.60 ATOM 346 C LYS 45 6.814 33.996 16.642 1.00 6.60 ATOM 347 O LYS 45 5.848 34.755 16.536 1.00 6.60 ATOM 348 CB LYS 45 8.142 33.775 18.830 1.00 7.10 ATOM 349 CG LYS 45 8.203 32.237 18.808 1.00 7.10 ATOM 350 CD LYS 45 8.654 31.637 20.149 1.00 7.10 ATOM 351 CE LYS 45 8.504 30.109 20.100 1.00 7.10 ATOM 352 NZ LYS 45 9.054 29.452 21.316 1.00 7.10 TER END