####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS281_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS281_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 24 - 41 4.80 14.49 LONGEST_CONTINUOUS_SEGMENT: 18 25 - 42 4.77 15.37 LONGEST_CONTINUOUS_SEGMENT: 18 26 - 43 4.96 16.03 LCS_AVERAGE: 36.57 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 27 - 37 1.90 13.72 LONGEST_CONTINUOUS_SEGMENT: 11 28 - 38 1.97 14.15 LCS_AVERAGE: 15.75 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 34 - 38 0.99 14.07 LCS_AVERAGE: 8.32 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 10 3 4 5 5 6 7 11 11 12 13 15 16 17 17 19 20 22 22 24 25 LCS_GDT V 3 V 3 4 6 10 3 4 5 5 7 8 9 10 10 12 13 13 15 16 18 20 22 22 23 25 LCS_GDT Q 4 Q 4 4 6 13 3 4 5 5 7 8 9 10 10 10 13 13 14 15 16 18 20 22 23 24 LCS_GDT G 5 G 5 4 6 13 3 4 5 5 6 7 8 10 10 12 13 13 14 15 16 18 19 22 23 24 LCS_GDT P 6 P 6 4 6 13 0 3 4 5 6 7 7 8 9 12 13 13 14 15 16 18 19 22 23 24 LCS_GDT W 7 W 7 4 6 13 0 3 4 5 6 7 7 8 9 12 13 13 14 15 16 18 19 22 23 24 LCS_GDT V 8 V 8 4 5 13 1 3 4 5 5 5 7 8 9 12 13 13 14 15 16 18 19 22 23 24 LCS_GDT G 9 G 9 4 5 13 0 3 4 4 5 6 7 8 9 12 13 13 14 15 16 18 19 22 23 24 LCS_GDT S 10 S 10 3 5 13 1 3 4 5 5 6 7 8 9 12 13 13 14 14 15 16 19 22 23 24 LCS_GDT S 11 S 11 4 4 13 3 3 4 5 5 6 6 7 8 10 11 12 13 13 15 16 19 21 23 24 LCS_GDT Y 12 Y 12 4 4 13 3 3 4 5 5 5 5 6 8 10 11 11 12 12 13 16 19 22 23 23 LCS_GDT V 13 V 13 4 4 13 3 3 4 4 4 5 7 8 9 12 13 13 14 14 15 16 19 22 23 24 LCS_GDT A 14 A 14 4 4 17 3 3 4 4 4 6 7 8 9 12 14 14 15 15 16 17 19 22 23 24 LCS_GDT E 15 E 15 3 7 17 3 3 3 4 6 6 7 8 9 13 14 15 15 17 17 19 20 22 23 26 LCS_GDT T 16 T 16 3 7 17 3 4 5 5 7 8 9 12 13 13 14 15 15 17 17 19 20 22 24 26 LCS_GDT G 17 G 17 3 7 17 3 3 4 5 7 8 9 10 13 13 14 15 15 17 17 19 20 21 23 26 LCS_GDT Q 18 Q 18 3 7 17 0 3 4 4 6 6 7 8 12 13 14 15 15 17 17 19 20 22 24 26 LCS_GDT N 19 N 19 4 7 17 3 4 4 5 6 7 9 10 12 13 14 15 15 17 18 20 22 22 24 26 LCS_GDT W 20 W 20 4 7 17 3 4 4 5 6 7 9 10 12 13 14 15 15 17 18 20 22 22 24 26 LCS_GDT A 21 A 21 4 7 17 3 4 4 5 6 6 8 10 12 13 14 15 15 17 17 20 22 22 24 26 LCS_GDT S 22 S 22 4 4 17 3 4 4 5 6 7 9 10 12 13 14 15 15 17 17 18 19 21 22 24 LCS_GDT L 23 L 23 4 5 17 3 4 4 5 6 6 8 10 11 12 14 15 15 17 19 20 22 22 24 26 LCS_GDT A 24 A 24 4 5 18 3 4 4 4 6 6 7 8 9 10 11 13 14 17 19 20 22 22 24 26 LCS_GDT A 25 A 25 4 5 18 3 4 4 4 6 7 9 10 12 13 14 15 15 17 19 20 22 22 24 26 LCS_GDT N 26 N 26 4 5 18 3 4 4 4 6 7 9 10 12 13 15 16 17 17 19 20 22 22 24 26 LCS_GDT E 27 E 27 3 11 18 3 6 6 8 10 11 12 13 13 15 15 16 17 17 19 20 22 22 24 26 LCS_GDT L 28 L 28 3 11 18 3 4 6 8 10 11 12 13 13 15 15 16 17 17 19 20 22 22 24 26 LCS_GDT R 29 R 29 3 11 18 3 3 4 5 7 10 12 13 13 15 15 16 17 17 19 20 22 22 24 26 LCS_GDT V 30 V 30 3 11 18 4 4 6 7 10 11 12 13 13 15 15 16 17 17 19 20 22 22 24 26 LCS_GDT T 31 T 31 3 11 18 4 6 6 8 10 11 12 13 13 15 15 16 17 17 19 20 22 22 24 26 LCS_GDT E 32 E 32 4 11 18 4 6 6 8 10 11 12 13 13 15 15 16 17 17 19 20 22 22 24 26 LCS_GDT R 33 R 33 4 11 18 3 4 5 8 10 11 12 13 13 15 15 16 17 17 19 20 22 22 24 26 LCS_GDT P 34 P 34 5 11 18 4 6 6 8 10 11 12 13 13 15 15 16 17 17 19 20 22 22 24 26 LCS_GDT F 35 F 35 5 11 18 3 4 5 8 10 11 12 13 13 15 15 16 17 17 19 20 22 22 24 26 LCS_GDT W 36 W 36 5 11 18 3 6 6 8 10 11 12 13 13 15 15 16 17 17 19 20 22 22 24 26 LCS_GDT I 37 I 37 5 11 18 3 6 6 8 10 11 12 13 13 15 15 16 17 17 19 20 22 22 24 26 LCS_GDT S 38 S 38 5 11 18 1 4 5 7 10 11 12 13 13 15 15 16 17 17 19 20 22 22 24 26 LCS_GDT S 39 S 39 3 4 18 0 3 3 4 5 7 9 13 13 15 15 16 17 17 19 20 22 22 24 26 LCS_GDT F 40 F 40 3 4 18 3 3 3 4 4 6 7 10 11 15 15 16 17 17 19 20 20 22 24 26 LCS_GDT I 41 I 41 3 5 18 3 3 4 5 6 6 7 11 12 15 15 16 17 17 19 20 20 22 24 26 LCS_GDT G 42 G 42 3 5 18 3 3 4 5 6 6 7 10 11 13 13 16 17 17 18 19 20 20 21 24 LCS_GDT R 43 R 43 3 5 18 1 3 3 4 4 5 7 7 7 9 11 11 14 15 16 17 19 20 21 22 LCS_GDT S 44 S 44 3 5 15 1 3 3 4 4 5 5 6 7 9 11 11 12 12 14 15 17 19 21 22 LCS_GDT K 45 K 45 0 5 13 0 0 3 4 4 5 5 6 7 8 9 10 12 12 12 13 14 14 16 18 LCS_AVERAGE LCS_A: 20.21 ( 8.32 15.75 36.57 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 6 8 10 11 12 13 13 15 15 16 17 17 19 20 22 22 24 26 GDT PERCENT_AT 9.09 13.64 13.64 18.18 22.73 25.00 27.27 29.55 29.55 34.09 34.09 36.36 38.64 38.64 43.18 45.45 50.00 50.00 54.55 59.09 GDT RMS_LOCAL 0.13 0.79 0.79 1.27 1.63 1.77 2.01 2.61 2.61 3.40 3.40 3.75 4.18 4.18 4.93 5.45 6.23 6.23 6.77 7.33 GDT RMS_ALL_AT 15.45 13.49 13.49 13.69 13.84 13.85 13.94 14.34 14.34 15.12 15.12 13.98 14.34 14.34 14.20 14.08 13.55 13.55 13.56 13.77 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 7.431 0 0.095 0.140 11.034 0.000 0.000 - LGA V 3 V 3 11.036 0 0.059 0.100 12.708 0.000 0.000 12.326 LGA Q 4 Q 4 17.143 0 0.134 0.211 19.892 0.000 0.000 19.416 LGA G 5 G 5 21.952 0 0.197 0.197 21.952 0.000 0.000 - LGA P 6 P 6 22.502 0 0.673 0.540 26.379 0.000 0.000 26.379 LGA W 7 W 7 20.371 0 0.352 1.184 23.952 0.000 0.000 23.952 LGA V 8 V 8 19.184 0 0.669 0.861 20.733 0.000 0.000 19.277 LGA G 9 G 9 21.149 0 0.511 0.511 21.267 0.000 0.000 - LGA S 10 S 10 24.218 0 0.666 0.665 27.958 0.000 0.000 27.958 LGA S 11 S 11 21.114 0 0.583 0.795 21.814 0.000 0.000 17.584 LGA Y 12 Y 12 19.299 0 0.118 1.358 20.518 0.000 0.000 19.918 LGA V 13 V 13 19.275 0 0.627 1.480 22.386 0.000 0.000 22.386 LGA A 14 A 14 18.352 0 0.610 0.581 18.352 0.000 0.000 - LGA E 15 E 15 13.994 0 0.639 1.003 16.275 0.000 0.000 16.275 LGA T 16 T 16 11.884 0 0.533 1.017 12.868 0.000 0.000 11.513 LGA G 17 G 17 15.398 0 0.643 0.643 18.581 0.000 0.000 - LGA Q 18 Q 18 16.656 0 0.477 1.521 23.104 0.000 0.000 23.104 LGA N 19 N 19 17.973 0 0.642 0.557 21.244 0.000 0.000 20.516 LGA W 20 W 20 19.855 0 0.087 1.153 25.834 0.000 0.000 25.278 LGA A 21 A 21 17.924 0 0.664 0.613 18.445 0.000 0.000 - LGA S 22 S 22 21.287 0 0.025 0.050 23.779 0.000 0.000 23.770 LGA L 23 L 23 16.297 0 0.623 1.397 18.230 0.000 0.000 18.020 LGA A 24 A 24 12.256 0 0.642 0.610 14.101 0.000 0.000 - LGA A 25 A 25 10.585 0 0.393 0.385 12.572 0.000 0.000 - LGA N 26 N 26 7.941 0 0.646 0.828 13.604 0.000 0.000 10.347 LGA E 27 E 27 2.431 0 0.653 1.342 5.900 27.273 12.929 4.815 LGA L 28 L 28 1.643 0 0.276 0.246 2.137 51.364 58.409 1.327 LGA R 29 R 29 3.489 0 0.569 1.431 13.104 18.636 6.777 12.905 LGA V 30 V 30 2.946 0 0.269 1.041 7.622 41.818 23.896 6.580 LGA T 31 T 31 2.200 0 0.315 1.206 4.040 41.818 34.545 3.473 LGA E 32 E 32 1.230 0 0.322 1.250 6.680 70.455 37.576 6.064 LGA R 33 R 33 2.284 0 0.661 1.454 5.965 29.091 25.124 5.458 LGA P 34 P 34 0.313 0 0.650 0.539 3.034 60.909 45.455 3.034 LGA F 35 F 35 2.524 0 0.048 1.251 12.148 35.909 13.554 12.148 LGA W 36 W 36 0.936 0 0.086 0.130 6.375 59.091 28.052 6.375 LGA I 37 I 37 2.633 0 0.680 1.388 5.374 42.273 22.500 5.332 LGA S 38 S 38 0.991 0 0.562 0.820 3.512 55.455 49.697 3.512 LGA S 39 S 39 5.690 0 0.699 0.580 7.646 1.364 0.909 6.317 LGA F 40 F 40 6.654 0 0.651 1.482 12.246 0.000 0.000 12.246 LGA I 41 I 41 8.744 0 0.153 1.093 12.658 0.000 0.000 12.214 LGA G 42 G 42 13.724 0 0.679 0.679 14.818 0.000 0.000 - LGA R 43 R 43 16.409 0 0.234 1.153 19.883 0.000 0.000 17.686 LGA S 44 S 44 17.171 0 0.650 0.787 21.108 0.000 0.000 15.768 LGA K 45 K 45 18.535 0 0.590 0.764 20.963 0.000 0.000 13.408 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.524 11.408 12.246 12.169 8.169 3.273 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 2.61 26.705 24.273 0.479 LGA_LOCAL RMSD: 2.612 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.335 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.524 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.110685 * X + -0.526746 * Y + 0.842786 * Z + -19.215363 Y_new = -0.376101 * X + 0.807131 * Y + 0.455068 * Z + -18.672596 Z_new = -0.919944 * X + -0.266603 * Y + -0.287447 * Z + 90.887047 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.857011 1.167938 -2.393797 [DEG: -106.3989 66.9179 -137.1544 ] ZXZ: 2.065896 1.862356 -1.852873 [DEG: 118.3671 106.7052 -106.1618 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS281_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS281_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 2.61 24.273 11.52 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS281_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 10 N ALA 2 14.767 40.414 17.775 1.00 0.70 ATOM 11 CA ALA 2 14.362 39.556 18.862 1.00 0.60 ATOM 12 C ALA 2 13.235 40.193 19.619 1.00 0.40 ATOM 13 O ALA 2 13.297 41.373 19.983 1.00 0.40 ATOM 15 CB ALA 2 15.479 39.237 19.869 1.00 0.40 ATOM 16 N VAL 3 12.157 39.408 19.841 1.00 0.40 ATOM 17 CA VAL 3 10.988 39.858 20.540 1.00 0.60 ATOM 18 C VAL 3 11.053 39.286 21.928 1.00 0.50 ATOM 19 O VAL 3 11.087 38.061 22.117 1.00 0.60 ATOM 21 CB VAL 3 9.690 39.440 19.855 1.00 0.40 ATOM 22 CG1 VAL 3 8.456 39.831 20.695 1.00 0.60 ATOM 23 CG2 VAL 3 9.650 40.047 18.442 1.00 0.40 ATOM 24 N GLN 4 11.100 40.194 22.926 1.00 0.40 ATOM 25 CA GLN 4 11.123 39.853 24.324 1.00 0.40 ATOM 26 C GLN 4 9.894 40.519 24.835 1.00 0.70 ATOM 27 O GLN 4 9.797 41.751 24.857 1.00 0.50 ATOM 29 CB GLN 4 12.357 40.383 25.086 1.00 0.70 ATOM 30 CG GLN 4 13.703 39.787 24.709 1.00 0.40 ATOM 31 CD GLN 4 14.838 40.386 25.524 1.00 0.60 ATOM 32 OE1 GLN 4 14.740 41.512 26.017 1.00 0.40 ATOM 33 NE2 GLN 4 15.912 39.637 25.679 1.00 0.40 ATOM 34 N GLY 5 8.904 39.694 25.230 1.00 0.70 ATOM 35 CA GLY 5 7.638 40.165 25.708 1.00 0.60 ATOM 36 C GLY 5 6.792 40.098 24.464 1.00 0.60 ATOM 37 O GLY 5 7.094 40.824 23.514 1.00 0.40 ATOM 39 N PRO 6 5.709 39.327 24.443 1.00 0.40 ATOM 40 CA PRO 6 4.858 39.158 23.286 1.00 0.60 ATOM 41 C PRO 6 4.209 40.394 22.729 1.00 0.50 ATOM 42 O PRO 6 3.983 41.358 23.464 1.00 0.60 ATOM 43 CB PRO 6 3.826 38.102 23.676 1.00 0.40 ATOM 44 CG PRO 6 4.183 37.719 25.113 1.00 0.70 ATOM 45 CD PRO 6 5.691 37.734 25.074 1.00 0.60 ATOM 46 N TRP 7 3.927 40.353 21.408 1.00 0.50 ATOM 47 CA TRP 7 3.432 41.447 20.602 1.00 0.50 ATOM 48 C TRP 7 2.118 41.997 21.065 1.00 0.60 ATOM 49 O TRP 7 1.213 41.246 21.447 1.00 0.70 ATOM 51 CB TRP 7 3.166 41.037 19.136 1.00 0.70 ATOM 52 CG TRP 7 2.729 42.214 18.335 1.00 0.70 ATOM 53 CD1 TRP 7 1.434 42.462 17.918 1.00 0.50 ATOM 54 CD2 TRP 7 3.540 43.239 17.811 1.00 0.50 ATOM 55 NE1 TRP 7 1.406 43.614 17.154 1.00 0.40 ATOM 56 CE2 TRP 7 2.697 44.114 17.085 1.00 0.60 ATOM 57 CE3 TRP 7 4.907 43.561 17.887 1.00 0.70 ATOM 58 CZ2 TRP 7 3.200 45.244 16.417 1.00 0.60 ATOM 59 CZ3 TRP 7 5.388 44.681 17.223 1.00 0.40 ATOM 60 CH2 TRP 7 4.527 45.496 16.509 1.00 0.40 ATOM 61 N VAL 8 2.024 43.345 21.059 1.00 0.50 ATOM 62 CA VAL 8 0.840 44.072 21.433 1.00 0.60 ATOM 63 C VAL 8 0.845 45.372 20.651 1.00 0.70 ATOM 64 O VAL 8 1.915 45.898 20.316 1.00 0.60 ATOM 66 CB VAL 8 0.739 44.302 22.948 1.00 0.40 ATOM 67 CG1 VAL 8 1.899 45.173 23.477 1.00 0.70 ATOM 68 CG2 VAL 8 -0.670 44.799 23.318 1.00 0.50 ATOM 69 N GLY 9 -0.356 45.903 20.316 1.00 0.60 ATOM 70 CA GLY 9 -0.439 47.152 19.612 1.00 0.50 ATOM 71 C GLY 9 -1.526 47.251 18.597 1.00 0.70 ATOM 72 O GLY 9 -1.835 46.310 17.859 1.00 0.40 ATOM 74 N SER 10 -2.111 48.469 18.547 1.00 0.60 ATOM 75 CA SER 10 -3.162 48.821 17.637 1.00 0.40 ATOM 76 C SER 10 -2.463 49.652 16.604 1.00 0.40 ATOM 77 O SER 10 -1.775 50.625 16.929 1.00 0.50 ATOM 79 CB SER 10 -4.293 49.640 18.290 1.00 0.60 ATOM 80 OG SER 10 -3.806 50.882 18.786 1.00 0.60 ATOM 81 N SER 11 -2.631 49.268 15.328 1.00 0.70 ATOM 82 CA SER 11 -2.001 49.940 14.223 1.00 0.60 ATOM 83 C SER 11 -2.823 49.793 12.974 1.00 0.40 ATOM 84 O SER 11 -3.797 49.039 12.963 1.00 0.50 ATOM 86 CB SER 11 -0.582 49.382 13.975 1.00 0.60 ATOM 87 OG SER 11 -0.629 48.002 13.630 1.00 0.60 ATOM 88 N TYR 12 -2.473 50.565 11.915 1.00 0.60 ATOM 89 CA TYR 12 -3.190 50.517 10.663 1.00 0.40 ATOM 90 C TYR 12 -2.716 49.241 9.987 1.00 0.40 ATOM 91 O TYR 12 -3.521 48.430 9.533 1.00 0.70 ATOM 93 CB TYR 12 -2.873 51.722 9.737 1.00 0.60 ATOM 94 CG TYR 12 -1.396 51.685 9.396 1.00 0.70 ATOM 95 CD1 TYR 12 -0.901 51.013 8.298 1.00 0.50 ATOM 96 CD2 TYR 12 -0.468 52.320 10.220 1.00 0.60 ATOM 97 CE1 TYR 12 0.457 50.948 8.006 1.00 0.60 ATOM 98 CE2 TYR 12 0.897 52.236 9.986 1.00 0.50 ATOM 99 CZ TYR 12 1.347 51.541 8.884 1.00 0.50 ATOM 100 OH TYR 12 2.692 51.387 8.658 1.00 0.50 ATOM 101 N VAL 13 -1.371 49.045 9.923 1.00 0.70 ATOM 102 CA VAL 13 -0.738 47.882 9.344 1.00 0.50 ATOM 103 C VAL 13 0.304 47.498 10.365 1.00 0.60 ATOM 104 O VAL 13 0.989 48.369 10.914 1.00 0.40 ATOM 106 CB VAL 13 -0.041 48.124 7.999 1.00 0.40 ATOM 107 CG1 VAL 13 -1.047 48.627 6.935 1.00 0.70 ATOM 108 CG2 VAL 13 1.110 49.136 8.167 1.00 0.50 ATOM 109 N ALA 14 0.421 46.185 10.671 1.00 0.70 ATOM 110 CA ALA 14 1.407 45.732 11.619 1.00 0.50 ATOM 111 C ALA 14 2.356 44.808 10.941 1.00 0.50 ATOM 112 O ALA 14 1.959 43.731 10.484 1.00 0.50 ATOM 114 CB ALA 14 0.834 44.990 12.841 1.00 0.40 ATOM 115 N GLU 15 3.641 45.218 10.839 1.00 0.40 ATOM 116 CA GLU 15 4.632 44.391 10.218 1.00 0.60 ATOM 117 C GLU 15 5.437 43.761 11.317 1.00 0.40 ATOM 118 O GLU 15 5.986 44.451 12.184 1.00 0.70 ATOM 120 CB GLU 15 5.533 45.167 9.230 1.00 0.70 ATOM 121 CG GLU 15 6.337 46.265 9.865 1.00 0.70 ATOM 122 CD GLU 15 7.227 47.042 8.929 1.00 0.50 ATOM 123 OE1 GLU 15 7.557 46.563 7.833 1.00 0.40 ATOM 124 OE2 GLU 15 7.644 48.166 9.319 1.00 0.70 ATOM 125 N THR 16 5.487 42.415 11.300 1.00 0.40 ATOM 126 CA THR 16 6.216 41.654 12.281 1.00 0.60 ATOM 127 C THR 16 6.984 40.667 11.439 1.00 0.50 ATOM 128 O THR 16 6.537 39.539 11.207 1.00 0.40 ATOM 130 CB THR 16 5.283 40.949 13.257 1.00 0.40 ATOM 131 OG1 THR 16 4.565 41.902 14.028 1.00 0.50 ATOM 132 CG2 THR 16 6.111 40.070 14.217 1.00 0.40 ATOM 133 N GLY 17 8.168 41.092 10.948 1.00 0.70 ATOM 134 CA GLY 17 8.970 40.234 10.113 1.00 0.60 ATOM 135 C GLY 17 10.338 40.055 10.669 1.00 0.70 ATOM 136 O GLY 17 10.907 40.975 11.262 1.00 0.70 ATOM 138 N GLN 18 10.886 38.830 10.449 1.00 0.70 ATOM 139 CA GLN 18 12.188 38.344 10.850 1.00 0.50 ATOM 140 C GLN 18 12.461 38.493 12.325 1.00 0.40 ATOM 141 O GLN 18 13.566 38.823 12.769 1.00 0.40 ATOM 143 CB GLN 18 13.357 38.773 9.909 1.00 0.60 ATOM 144 CG GLN 18 14.691 38.197 10.303 1.00 0.70 ATOM 145 CD GLN 18 15.795 38.624 9.385 1.00 0.60 ATOM 146 OE1 GLN 18 15.536 39.378 8.423 1.00 0.50 ATOM 147 NE2 GLN 18 17.007 38.103 9.548 1.00 0.60 ATOM 148 N ASN 19 11.401 38.250 13.126 1.00 0.60 ATOM 149 CA ASN 19 11.501 38.339 14.552 1.00 0.40 ATOM 150 C ASN 19 11.629 37.009 15.187 1.00 0.70 ATOM 151 O ASN 19 11.006 36.032 14.755 1.00 0.70 ATOM 153 CB ASN 19 10.373 39.120 15.248 1.00 0.70 ATOM 154 CG ASN 19 10.372 40.582 14.869 1.00 0.60 ATOM 155 OD1 ASN 19 9.368 41.053 14.321 1.00 0.70 ATOM 156 ND2 ASN 19 11.476 41.244 15.135 1.00 0.70 ATOM 157 N TRP 20 12.500 36.952 16.210 1.00 0.50 ATOM 158 CA TRP 20 12.721 35.753 16.945 1.00 0.40 ATOM 159 C TRP 20 12.302 36.042 18.349 1.00 0.50 ATOM 160 O TRP 20 12.978 36.771 19.083 1.00 0.60 ATOM 162 CB TRP 20 14.180 35.241 16.902 1.00 0.70 ATOM 163 CG TRP 20 14.300 33.950 17.636 1.00 0.40 ATOM 164 CD1 TRP 20 14.867 33.793 18.887 1.00 0.70 ATOM 165 CD2 TRP 20 13.922 32.672 17.184 1.00 0.60 ATOM 166 NE1 TRP 20 14.853 32.454 19.237 1.00 0.50 ATOM 167 CE2 TRP 20 14.264 31.747 18.199 1.00 0.50 ATOM 168 CE3 TRP 20 13.295 32.172 16.028 1.00 0.70 ATOM 169 CZ2 TRP 20 14.030 30.368 18.059 1.00 0.60 ATOM 170 CZ3 TRP 20 13.071 30.808 15.905 1.00 0.60 ATOM 171 CH2 TRP 20 13.438 29.941 16.916 1.00 0.50 ATOM 172 N ALA 21 11.127 35.501 18.729 1.00 0.50 ATOM 173 CA ALA 21 10.629 35.652 20.063 1.00 0.50 ATOM 174 C ALA 21 11.144 34.444 20.781 1.00 0.60 ATOM 175 O ALA 21 11.065 33.325 20.269 1.00 0.40 ATOM 177 CB ALA 21 9.101 35.696 20.182 1.00 0.50 ATOM 178 N SER 22 11.675 34.674 21.998 1.00 0.50 ATOM 179 CA SER 22 12.226 33.636 22.835 1.00 0.60 ATOM 180 C SER 22 11.134 32.685 23.254 1.00 0.50 ATOM 181 O SER 22 11.360 31.475 23.358 1.00 0.70 ATOM 183 CB SER 22 12.944 34.234 24.066 1.00 0.60 ATOM 184 OG SER 22 12.042 34.964 24.891 1.00 0.50 ATOM 185 N LEU 23 9.926 33.248 23.472 1.00 0.60 ATOM 186 CA LEU 23 8.755 32.510 23.832 1.00 0.60 ATOM 187 C LEU 23 8.166 31.839 22.619 1.00 0.40 ATOM 188 O LEU 23 7.872 32.483 21.604 1.00 0.60 ATOM 190 CB LEU 23 7.680 33.429 24.462 1.00 0.70 ATOM 191 CG LEU 23 6.448 32.719 24.933 1.00 0.50 ATOM 192 CD1 LEU 23 6.820 31.792 26.071 1.00 0.40 ATOM 193 CD2 LEU 23 5.331 33.676 25.322 1.00 0.60 ATOM 194 N ALA 24 8.014 30.505 22.719 1.00 0.70 ATOM 195 CA ALA 24 7.419 29.683 21.696 1.00 0.50 ATOM 196 C ALA 24 5.943 29.940 21.793 1.00 0.50 ATOM 197 O ALA 24 5.397 30.100 22.889 1.00 0.40 ATOM 199 CB ALA 24 7.657 28.175 21.885 1.00 0.70 ATOM 200 N ALA 25 5.271 29.955 20.621 1.00 0.50 ATOM 201 CA ALA 25 3.862 30.234 20.473 1.00 0.40 ATOM 202 C ALA 25 3.551 31.657 20.871 1.00 0.40 ATOM 203 O ALA 25 2.486 31.957 21.422 1.00 0.50 ATOM 205 CB ALA 25 2.923 29.213 21.156 1.00 0.50 ATOM 206 N ASN 26 4.518 32.570 20.611 1.00 0.40 ATOM 207 CA ASN 26 4.368 33.976 20.864 1.00 0.40 ATOM 208 C ASN 26 3.574 34.479 19.701 1.00 0.70 ATOM 209 O ASN 26 3.827 34.126 18.548 1.00 0.50 ATOM 211 CB ASN 26 5.687 34.761 20.944 1.00 0.40 ATOM 212 CG ASN 26 5.471 36.200 21.355 1.00 0.40 ATOM 213 OD1 ASN 26 4.346 36.694 21.215 1.00 0.40 ATOM 214 ND2 ASN 26 6.529 36.832 21.812 1.00 0.50 ATOM 215 N GLU 27 2.555 35.302 20.004 1.00 0.70 ATOM 216 CA GLU 27 1.677 35.873 19.022 1.00 0.60 ATOM 217 C GLU 27 2.382 36.925 18.223 1.00 0.40 ATOM 218 O GLU 27 3.090 37.769 18.784 1.00 0.60 ATOM 220 CB GLU 27 0.454 36.568 19.653 1.00 0.60 ATOM 221 CG GLU 27 -0.504 35.605 20.402 1.00 0.60 ATOM 222 CD GLU 27 -0.181 35.273 21.828 1.00 0.50 ATOM 223 OE1 GLU 27 0.762 35.694 22.438 1.00 0.70 ATOM 224 OE2 GLU 27 -0.984 34.495 22.374 1.00 0.70 ATOM 225 N LEU 28 2.220 36.870 16.878 1.00 0.50 ATOM 226 CA LEU 28 2.786 37.857 15.993 1.00 0.60 ATOM 227 C LEU 28 1.963 39.107 16.176 1.00 0.70 ATOM 228 O LEU 28 2.516 40.195 16.326 1.00 0.50 ATOM 230 CB LEU 28 2.736 37.410 14.517 1.00 0.70 ATOM 231 CG LEU 28 3.573 36.210 14.195 1.00 0.50 ATOM 232 CD1 LEU 28 3.336 35.811 12.752 1.00 0.70 ATOM 233 CD2 LEU 28 5.054 36.432 14.483 1.00 0.50 ATOM 234 N ARG 29 0.616 38.951 16.190 1.00 0.60 ATOM 235 CA ARG 29 -0.312 40.038 16.401 1.00 0.50 ATOM 236 C ARG 29 -1.636 39.408 16.757 1.00 0.60 ATOM 237 O ARG 29 -1.963 38.307 16.306 1.00 0.40 ATOM 239 CB ARG 29 -0.529 40.978 15.175 1.00 0.50 ATOM 240 CG ARG 29 -1.419 42.116 15.423 1.00 0.60 ATOM 241 CD ARG 29 -1.465 42.863 14.094 1.00 0.50 ATOM 242 NE ARG 29 -2.339 44.017 14.269 1.00 0.60 ATOM 243 CZ ARG 29 -2.604 44.891 13.302 1.00 0.70 ATOM 244 NH1 ARG 29 -1.989 44.775 12.124 1.00 0.70 ATOM 245 NH2 ARG 29 -3.436 45.893 13.565 1.00 0.40 ATOM 246 N VAL 30 -2.392 40.120 17.624 1.00 0.40 ATOM 247 CA VAL 30 -3.711 39.796 18.136 1.00 0.60 ATOM 248 C VAL 30 -4.500 41.079 18.314 1.00 0.50 ATOM 249 O VAL 30 -4.019 42.166 17.971 1.00 0.50 ATOM 251 CB VAL 30 -3.750 38.991 19.439 1.00 0.50 ATOM 252 CG1 VAL 30 -3.119 39.789 20.585 1.00 0.50 ATOM 253 CG2 VAL 30 -5.209 38.586 19.776 1.00 0.40 ATOM 254 N THR 31 -5.759 40.948 18.804 1.00 0.70 ATOM 255 CA THR 31 -6.743 41.978 19.108 1.00 0.50 ATOM 256 C THR 31 -7.254 42.726 17.918 1.00 0.50 ATOM 257 O THR 31 -8.379 42.471 17.481 1.00 0.40 ATOM 259 CB THR 31 -6.411 42.953 20.239 1.00 0.40 ATOM 260 OG1 THR 31 -6.330 42.311 21.509 1.00 0.70 ATOM 261 CG2 THR 31 -7.480 44.058 20.269 1.00 0.60 ATOM 262 N GLU 32 -6.433 43.635 17.344 1.00 0.40 ATOM 263 CA GLU 32 -6.847 44.420 16.213 1.00 0.60 ATOM 264 C GLU 32 -6.632 43.656 14.939 1.00 0.60 ATOM 265 O GLU 32 -5.747 43.964 14.131 1.00 0.60 ATOM 267 CB GLU 32 -6.166 45.800 16.131 1.00 0.70 ATOM 268 CG GLU 32 -6.530 46.754 17.298 1.00 0.50 ATOM 269 CD GLU 32 -7.953 47.208 17.407 1.00 0.40 ATOM 270 OE1 GLU 32 -8.656 47.511 16.482 1.00 0.40 ATOM 271 OE2 GLU 32 -8.394 47.259 18.570 1.00 0.50 ATOM 272 N ARG 33 -7.478 42.619 14.748 1.00 0.40 ATOM 273 CA ARG 33 -7.446 41.779 13.582 1.00 0.60 ATOM 274 C ARG 33 -7.760 42.430 12.256 1.00 0.60 ATOM 275 O ARG 33 -7.071 42.050 11.313 1.00 0.50 ATOM 277 CB ARG 33 -8.219 40.451 13.679 1.00 0.50 ATOM 278 CG ARG 33 -7.672 39.468 14.632 1.00 0.50 ATOM 279 CD ARG 33 -8.602 38.260 14.540 1.00 0.50 ATOM 280 NE ARG 33 -9.913 38.681 15.024 1.00 0.70 ATOM 281 CZ ARG 33 -10.991 37.902 14.993 1.00 0.40 ATOM 282 NH1 ARG 33 -10.916 36.698 14.421 1.00 0.70 ATOM 283 NH2 ARG 33 -12.128 38.378 15.485 1.00 0.70 ATOM 284 N PRO 34 -8.727 43.340 12.054 1.00 0.60 ATOM 285 CA PRO 34 -8.987 43.935 10.760 1.00 0.50 ATOM 286 C PRO 34 -7.819 44.616 10.102 1.00 0.50 ATOM 287 O PRO 34 -7.823 44.777 8.915 1.00 0.70 ATOM 288 CB PRO 34 -10.228 44.817 10.933 1.00 0.40 ATOM 289 CG PRO 34 -10.600 44.656 12.368 1.00 0.60 ATOM 290 CD PRO 34 -9.307 44.364 13.126 1.00 0.70 ATOM 291 N PHE 35 -6.833 45.141 10.869 1.00 0.70 ATOM 292 CA PHE 35 -5.733 45.881 10.295 1.00 0.40 ATOM 293 C PHE 35 -4.778 44.935 9.615 1.00 0.70 ATOM 294 O PHE 35 -4.561 43.837 10.121 1.00 0.70 ATOM 296 CB PHE 35 -4.942 46.673 11.353 1.00 0.70 ATOM 297 CG PHE 35 -5.662 47.788 12.060 1.00 0.70 ATOM 298 CD1 PHE 35 -5.715 49.065 11.468 1.00 0.70 ATOM 299 CD2 PHE 35 -6.300 47.612 13.270 1.00 0.40 ATOM 300 CE1 PHE 35 -6.299 50.111 12.155 1.00 0.60 ATOM 301 CE2 PHE 35 -6.907 48.624 13.965 1.00 0.70 ATOM 302 CZ PHE 35 -6.921 49.916 13.375 1.00 0.60 ATOM 303 N TRP 36 -4.201 45.327 8.443 1.00 0.60 ATOM 304 CA TRP 36 -3.258 44.463 7.779 1.00 0.40 ATOM 305 C TRP 36 -1.905 44.330 8.364 1.00 0.50 ATOM 306 O TRP 36 -1.247 45.204 8.859 1.00 0.70 ATOM 308 CB TRP 36 -3.062 44.515 6.257 1.00 0.60 ATOM 309 CG TRP 36 -4.303 44.087 5.548 1.00 0.50 ATOM 310 CD1 TRP 36 -5.285 44.937 5.072 1.00 0.40 ATOM 311 CD2 TRP 36 -4.732 42.769 5.298 1.00 0.70 ATOM 312 NE1 TRP 36 -6.316 44.192 4.524 1.00 0.50 ATOM 313 CE2 TRP 36 -5.986 42.850 4.648 1.00 0.50 ATOM 314 CE3 TRP 36 -4.192 41.490 5.521 1.00 0.70 ATOM 315 CZ2 TRP 36 -6.702 41.701 4.271 1.00 0.40 ATOM 316 CZ3 TRP 36 -4.910 40.365 5.141 1.00 0.50 ATOM 317 CH2 TRP 36 -6.141 40.494 4.523 1.00 0.40 ATOM 318 N ILE 37 -1.539 43.045 8.395 1.00 0.60 ATOM 319 CA ILE 37 -0.341 42.509 8.951 1.00 0.60 ATOM 320 C ILE 37 0.552 42.241 7.770 1.00 0.50 ATOM 321 O ILE 37 0.082 41.918 6.674 1.00 0.40 ATOM 323 CB ILE 37 -0.624 41.188 9.656 1.00 0.70 ATOM 324 CG1 ILE 37 -1.531 41.310 10.880 1.00 0.50 ATOM 325 CG2 ILE 37 0.727 40.521 9.954 1.00 0.60 ATOM 326 CD1 ILE 37 -2.002 39.976 11.432 1.00 0.60 ATOM 327 N SER 38 1.866 42.440 7.979 1.00 0.60 ATOM 328 CA SER 38 2.861 42.183 6.987 1.00 0.70 ATOM 329 C SER 38 3.914 41.360 7.684 1.00 0.50 ATOM 330 O SER 38 4.814 41.878 8.343 1.00 0.70 ATOM 332 CB SER 38 3.401 43.470 6.352 1.00 0.70 ATOM 333 OG SER 38 4.328 43.109 5.334 1.00 0.60 ATOM 334 N SER 39 3.742 40.021 7.597 1.00 0.60 ATOM 335 CA SER 39 4.585 39.012 8.178 1.00 0.50 ATOM 336 C SER 39 4.682 37.816 7.255 1.00 0.60 ATOM 337 O SER 39 3.820 37.607 6.395 1.00 0.70 ATOM 339 CB SER 39 4.052 38.513 9.524 1.00 0.70 ATOM 340 OG SER 39 2.777 37.905 9.366 1.00 0.60 ATOM 341 N PHE 40 5.769 37.018 7.400 1.00 0.40 ATOM 342 CA PHE 40 5.985 35.856 6.578 1.00 0.60 ATOM 343 C PHE 40 6.704 34.810 7.380 1.00 0.60 ATOM 344 O PHE 40 7.670 35.106 8.083 1.00 0.60 ATOM 346 CB PHE 40 6.863 36.200 5.340 1.00 0.70 ATOM 347 CG PHE 40 8.211 36.670 5.814 1.00 0.70 ATOM 348 CD1 PHE 40 9.232 35.750 6.002 1.00 0.60 ATOM 349 CD2 PHE 40 8.425 37.984 6.153 1.00 0.50 ATOM 350 CE1 PHE 40 10.464 36.154 6.538 1.00 0.50 ATOM 351 CE2 PHE 40 9.640 38.387 6.700 1.00 0.50 ATOM 352 CZ PHE 40 10.645 37.460 6.889 1.00 0.50 ATOM 353 N ILE 41 6.209 33.557 7.298 1.00 0.70 ATOM 354 CA ILE 41 6.805 32.442 7.997 1.00 0.60 ATOM 355 C ILE 41 6.606 31.234 7.132 1.00 0.70 ATOM 356 O ILE 41 5.698 31.194 6.297 1.00 0.70 ATOM 358 CB ILE 41 6.250 32.212 9.411 1.00 0.70 ATOM 359 CG1 ILE 41 6.934 31.081 10.165 1.00 0.60 ATOM 360 CG2 ILE 41 4.732 32.047 9.276 1.00 0.60 ATOM 361 CD1 ILE 41 6.647 31.087 11.655 1.00 0.70 ATOM 362 N GLY 42 7.476 30.222 7.282 1.00 0.40 ATOM 363 CA GLY 42 7.283 29.047 6.511 1.00 0.40 ATOM 364 C GLY 42 8.127 27.935 6.966 1.00 0.70 ATOM 365 O GLY 42 9.200 28.114 7.552 1.00 0.50 ATOM 367 N ARG 43 7.592 26.737 6.687 1.00 0.70 ATOM 368 CA ARG 43 8.270 25.533 6.965 1.00 0.70 ATOM 369 C ARG 43 8.750 25.125 5.624 1.00 0.70 ATOM 370 O ARG 43 8.064 24.481 4.828 1.00 0.60 ATOM 372 CB ARG 43 7.489 24.427 7.704 1.00 0.70 ATOM 373 CG ARG 43 7.020 24.782 9.055 1.00 0.70 ATOM 374 CD ARG 43 8.289 24.907 9.896 1.00 0.60 ATOM 375 NE ARG 43 7.880 25.260 11.252 1.00 0.70 ATOM 376 CZ ARG 43 8.741 25.448 12.251 1.00 0.70 ATOM 377 NH1 ARG 43 10.041 25.234 12.049 1.00 0.60 ATOM 378 NH2 ARG 43 8.259 25.791 13.440 1.00 0.60 ATOM 379 N SER 44 9.982 25.611 5.378 1.00 0.50 ATOM 380 CA SER 44 10.806 25.397 4.224 1.00 0.40 ATOM 381 C SER 44 11.403 24.025 4.393 1.00 0.40 ATOM 382 O SER 44 11.828 23.412 3.415 1.00 0.70 ATOM 384 CB SER 44 11.932 26.432 4.112 1.00 0.50 ATOM 385 OG SER 44 12.787 26.325 5.242 1.00 0.70 ATOM 386 N LYS 45 11.456 23.539 5.672 1.00 0.40 ATOM 387 CA LYS 45 11.920 22.228 6.055 1.00 0.70 ATOM 388 C LYS 45 10.986 21.279 5.355 1.00 0.70 ATOM 389 O LYS 45 11.436 20.278 4.795 1.00 0.50 ATOM 391 CB LYS 45 11.758 21.943 7.561 1.00 0.60 ATOM 392 CG LYS 45 12.640 22.794 8.435 1.00 0.40 ATOM 393 CD LYS 45 12.447 22.482 9.887 1.00 0.70 ATOM 394 CE LYS 45 13.234 23.225 10.897 1.00 0.50 ATOM 395 NZ LYS 45 12.926 22.796 12.311 1.00 0.60 TER END