####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS261_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS261_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 36 8 - 43 4.97 6.90 LCS_AVERAGE: 76.03 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 20 - 35 1.97 8.55 LCS_AVERAGE: 25.41 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.61 7.66 LCS_AVERAGE: 16.37 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 7 13 3 3 4 6 13 14 19 22 26 27 29 30 32 32 34 37 38 39 40 41 LCS_GDT V 3 V 3 4 7 24 3 5 14 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT Q 4 Q 4 4 7 24 3 11 14 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT G 5 G 5 4 7 24 0 4 5 6 10 11 14 17 25 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT P 6 P 6 3 7 24 3 3 5 8 10 12 14 23 25 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT W 7 W 7 3 7 24 3 3 6 7 9 10 12 14 14 27 29 30 31 32 34 37 37 39 40 41 LCS_GDT V 8 V 8 3 11 36 3 3 6 6 8 17 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT G 9 G 9 9 11 36 8 9 11 12 14 16 21 23 26 26 29 30 33 35 35 37 38 39 40 41 LCS_GDT S 10 S 10 9 11 36 8 9 9 9 11 11 14 16 21 24 27 30 33 35 35 37 38 39 40 41 LCS_GDT S 11 S 11 9 11 36 8 9 9 9 11 12 17 19 22 26 28 30 33 35 35 37 38 39 40 41 LCS_GDT Y 12 Y 12 9 11 36 8 9 9 9 11 11 17 19 22 26 28 30 33 35 35 37 38 39 40 41 LCS_GDT V 13 V 13 9 11 36 8 9 9 9 11 12 17 19 22 26 28 30 33 35 35 37 38 39 40 41 LCS_GDT A 14 A 14 9 11 36 8 9 9 9 11 11 15 18 21 22 25 28 31 33 35 36 38 39 40 41 LCS_GDT E 15 E 15 9 11 36 8 9 9 9 11 11 14 18 21 22 23 28 31 33 34 36 38 39 40 41 LCS_GDT T 16 T 16 9 11 36 8 9 9 9 11 11 15 18 21 22 24 28 32 35 35 36 38 39 40 41 LCS_GDT G 17 G 17 9 11 36 3 9 9 9 11 11 15 18 21 23 27 30 33 35 35 36 38 39 40 41 LCS_GDT Q 18 Q 18 4 11 36 3 4 5 9 11 11 15 18 21 24 28 30 33 35 35 37 38 39 40 41 LCS_GDT N 19 N 19 3 13 36 4 4 4 4 6 10 16 19 23 26 29 30 33 35 35 37 38 39 40 41 LCS_GDT W 20 W 20 12 16 36 10 12 14 14 17 20 21 23 26 27 29 30 32 35 35 37 38 39 40 41 LCS_GDT A 21 A 21 12 16 36 10 12 14 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT S 22 S 22 12 16 36 10 12 14 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT L 23 L 23 12 16 36 10 12 14 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT A 24 A 24 12 16 36 10 12 14 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT A 25 A 25 12 16 36 10 12 14 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT N 26 N 26 12 16 36 10 12 14 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT E 27 E 27 12 16 36 10 12 14 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT L 28 L 28 12 16 36 10 12 14 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT R 29 R 29 12 16 36 10 12 14 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT V 30 V 30 12 16 36 5 12 14 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT T 31 T 31 12 16 36 4 12 14 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT E 32 E 32 3 16 36 3 3 3 6 7 17 20 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT R 33 R 33 3 16 36 3 3 3 12 16 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT P 34 P 34 3 16 36 3 3 3 5 11 14 20 23 24 27 29 30 31 32 34 37 38 39 40 41 LCS_GDT F 35 F 35 3 16 36 3 4 4 13 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT W 36 W 36 6 7 36 4 4 6 7 8 13 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT I 37 I 37 6 7 36 4 4 6 8 12 18 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT S 38 S 38 6 7 36 4 5 8 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT S 39 S 39 6 7 36 4 5 6 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT F 40 F 40 6 7 36 4 5 6 11 16 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT I 41 I 41 6 7 36 4 7 13 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 LCS_GDT G 42 G 42 3 7 36 3 4 5 6 8 11 16 19 22 26 27 30 32 34 35 37 38 39 40 41 LCS_GDT R 43 R 43 3 4 36 3 3 4 6 8 8 11 16 19 21 25 28 31 33 34 35 38 38 39 41 LCS_GDT S 44 S 44 3 4 29 3 3 3 6 8 8 9 11 12 13 14 17 23 24 27 31 32 36 38 38 LCS_GDT K 45 K 45 3 3 14 2 3 3 6 8 8 8 11 12 13 14 15 15 17 17 17 17 17 19 19 LCS_AVERAGE LCS_A: 39.27 ( 16.37 25.41 76.03 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 14 14 17 20 21 23 26 27 29 30 33 35 35 37 38 39 40 41 GDT PERCENT_AT 22.73 27.27 31.82 31.82 38.64 45.45 47.73 52.27 59.09 61.36 65.91 68.18 75.00 79.55 79.55 84.09 86.36 88.64 90.91 93.18 GDT RMS_LOCAL 0.35 0.61 0.85 0.85 1.36 1.65 1.80 2.13 2.58 2.76 3.06 3.19 4.49 4.68 4.68 4.73 5.03 5.14 5.36 5.57 GDT RMS_ALL_AT 7.72 7.66 8.09 8.09 7.98 8.06 8.09 7.94 8.06 8.46 8.36 8.41 7.10 7.06 7.06 7.23 6.96 7.05 6.98 6.94 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 5.407 0 0.684 0.646 7.730 1.818 1.455 - LGA V 3 V 3 1.939 0 0.251 0.278 3.648 45.455 36.883 3.648 LGA Q 4 Q 4 1.502 0 0.639 1.000 6.539 35.909 24.848 5.689 LGA G 5 G 5 6.683 0 0.114 0.114 7.274 0.000 0.000 - LGA P 6 P 6 6.634 0 0.054 0.415 7.875 0.000 0.000 7.439 LGA W 7 W 7 7.160 0 0.370 0.363 11.716 0.000 0.000 10.796 LGA V 8 V 8 4.702 0 0.257 0.619 7.274 6.364 3.636 5.194 LGA G 9 G 9 4.042 0 0.539 0.539 5.999 8.182 8.182 - LGA S 10 S 10 10.498 0 0.084 0.361 12.869 0.000 0.000 12.600 LGA S 11 S 11 10.804 0 0.271 0.357 12.436 0.000 0.000 10.907 LGA Y 12 Y 12 8.114 0 0.049 0.854 9.389 0.000 1.515 6.340 LGA V 13 V 13 9.299 0 0.049 0.144 12.694 0.000 0.000 12.155 LGA A 14 A 14 15.988 0 0.043 0.207 18.022 0.000 0.000 - LGA E 15 E 15 16.613 0 0.095 1.304 18.178 0.000 0.000 18.178 LGA T 16 T 16 13.403 0 0.068 0.096 14.015 0.000 0.000 8.848 LGA G 17 G 17 14.204 0 0.657 0.657 14.204 0.000 0.000 - LGA Q 18 Q 18 10.772 0 0.676 0.791 14.655 0.000 0.000 13.574 LGA N 19 N 19 7.226 0 0.088 0.313 11.506 0.455 0.227 10.144 LGA W 20 W 20 0.233 0 0.620 1.311 11.113 81.818 25.455 11.113 LGA A 21 A 21 1.310 0 0.108 0.111 2.055 77.727 69.818 - LGA S 22 S 22 1.147 0 0.035 0.692 2.398 69.545 63.636 2.398 LGA L 23 L 23 0.965 0 0.067 1.412 5.778 86.364 54.091 3.758 LGA A 24 A 24 0.558 0 0.035 0.044 0.811 86.364 85.455 - LGA A 25 A 25 0.662 0 0.053 0.072 0.837 90.909 89.091 - LGA N 26 N 26 0.380 0 0.046 1.064 3.980 100.000 75.000 3.980 LGA E 27 E 27 0.410 0 0.043 0.279 1.318 90.909 88.081 1.318 LGA L 28 L 28 0.546 0 0.053 1.128 3.642 95.455 75.682 1.002 LGA R 29 R 29 0.466 0 0.018 1.612 8.160 90.909 50.579 8.160 LGA V 30 V 30 0.633 0 0.149 0.845 2.518 95.455 75.065 1.643 LGA T 31 T 31 0.723 0 0.422 0.342 2.298 66.364 56.104 2.298 LGA E 32 E 32 4.957 0 0.451 1.335 11.141 16.364 7.273 11.141 LGA R 33 R 33 3.244 0 0.125 1.244 10.045 7.273 4.132 10.045 LGA P 34 P 34 5.415 0 0.631 0.638 6.729 0.455 0.260 6.617 LGA F 35 F 35 2.852 0 0.584 0.847 11.138 24.545 9.421 11.138 LGA W 36 W 36 3.729 0 0.579 0.625 10.433 29.545 8.442 10.433 LGA I 37 I 37 3.250 0 0.098 1.465 7.458 33.182 21.364 3.481 LGA S 38 S 38 3.068 0 0.218 0.692 5.913 22.727 16.061 5.913 LGA S 39 S 39 2.956 0 0.227 0.755 4.801 24.545 19.697 4.653 LGA F 40 F 40 2.362 0 0.107 0.106 9.086 47.727 19.008 9.086 LGA I 41 I 41 2.961 0 0.632 0.937 6.194 20.000 10.455 6.179 LGA G 42 G 42 8.347 0 0.173 0.173 12.060 0.000 0.000 - LGA R 43 R 43 12.641 0 0.474 1.701 20.847 0.000 0.000 20.847 LGA S 44 S 44 16.602 0 0.705 0.618 20.056 0.000 0.000 16.633 LGA K 45 K 45 21.363 0 0.572 1.261 29.012 0.000 0.000 29.012 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 6.737 6.717 8.256 30.826 22.748 8.883 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 23 2.13 48.864 44.382 1.031 LGA_LOCAL RMSD: 2.131 Number of atoms: 23 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.937 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 6.737 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.321781 * X + 0.141184 * Y + -0.936229 * Z + 20.073627 Y_new = 0.580291 * X + -0.810744 * Y + 0.077185 * Z + 46.082722 Z_new = -0.748144 * X + -0.568121 * Y + -0.342810 * Z + 90.131638 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.064492 0.845261 -2.113719 [DEG: 60.9909 48.4299 -121.1072 ] ZXZ: -1.653052 1.920702 -2.220270 [DEG: -94.7129 110.0481 -127.2121 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS261_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS261_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 23 2.13 44.382 6.74 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS261_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 17 N ALA 2 7.648 41.847 12.688 1.00 3.69 ATOM 19 CA ALA 2 7.878 40.948 13.815 1.00 3.69 ATOM 21 CB ALA 2 6.693 41.099 14.779 1.00 3.69 ATOM 25 C ALA 2 8.114 39.471 13.462 1.00 3.69 ATOM 26 O ALA 2 8.780 38.798 14.249 1.00 3.69 ATOM 27 N VAL 3 7.616 38.941 12.328 1.00 3.37 ATOM 29 CA VAL 3 7.864 37.522 11.991 1.00 3.37 ATOM 31 CB VAL 3 6.728 36.574 12.454 1.00 3.37 ATOM 33 CG1 VAL 3 7.039 35.102 12.126 1.00 3.37 ATOM 37 CG2 VAL 3 6.532 36.632 13.980 1.00 3.37 ATOM 41 C VAL 3 8.221 37.380 10.520 1.00 3.37 ATOM 42 O VAL 3 7.396 37.025 9.697 1.00 3.37 ATOM 43 N GLN 4 9.494 37.600 10.183 1.00 3.35 ATOM 45 CA GLN 4 10.075 37.367 8.847 1.00 3.35 ATOM 47 CB GLN 4 11.454 38.055 8.765 1.00 3.35 ATOM 50 CG GLN 4 11.359 39.592 8.840 1.00 3.35 ATOM 53 CD GLN 4 10.536 40.166 7.688 1.00 3.35 ATOM 54 OE1 GLN 4 10.957 40.174 6.544 1.00 3.35 ATOM 55 NE2 GLN 4 9.325 40.610 7.929 1.00 3.35 ATOM 58 C GLN 4 10.104 35.892 8.362 1.00 3.35 ATOM 59 O GLN 4 10.796 35.571 7.397 1.00 3.35 ATOM 60 N GLY 5 9.346 34.975 8.974 1.00 3.58 ATOM 62 CA GLY 5 9.035 33.677 8.360 1.00 3.58 ATOM 65 C GLY 5 7.831 33.814 7.407 1.00 3.58 ATOM 66 O GLY 5 6.892 34.517 7.768 1.00 3.58 ATOM 67 N PRO 6 7.777 33.146 6.233 1.00 3.04 ATOM 68 CD PRO 6 8.814 32.267 5.708 1.00 3.04 ATOM 71 CG PRO 6 8.507 32.085 4.223 1.00 3.04 ATOM 74 CB PRO 6 6.994 32.265 4.152 1.00 3.04 ATOM 77 CA PRO 6 6.702 33.314 5.230 1.00 3.04 ATOM 79 C PRO 6 5.249 33.171 5.715 1.00 3.04 ATOM 80 O PRO 6 4.331 33.632 5.030 1.00 3.04 ATOM 81 N TRP 7 5.081 32.525 6.874 1.00 3.04 ATOM 83 CA TRP 7 3.906 31.882 7.474 1.00 3.04 ATOM 85 CB TRP 7 4.355 31.249 8.802 1.00 3.04 ATOM 88 CG TRP 7 5.726 30.621 8.793 1.00 3.04 ATOM 89 CD1 TRP 7 6.686 30.837 9.722 1.00 3.04 ATOM 91 NE1 TRP 7 7.835 30.149 9.377 1.00 3.04 ATOM 93 CE2 TRP 7 7.683 29.469 8.188 1.00 3.04 ATOM 94 CZ2 TRP 7 8.549 28.671 7.425 1.00 3.04 ATOM 96 CH2 TRP 7 8.082 28.111 6.224 1.00 3.04 ATOM 98 CZ3 TRP 7 6.761 28.352 5.809 1.00 3.04 ATOM 100 CE3 TRP 7 5.900 29.151 6.586 1.00 3.04 ATOM 102 CD2 TRP 7 6.335 29.736 7.795 1.00 3.04 ATOM 103 C TRP 7 2.638 32.727 7.644 1.00 3.04 ATOM 104 O TRP 7 1.584 32.182 7.960 1.00 3.04 ATOM 105 N VAL 8 2.708 34.039 7.431 1.00 2.40 ATOM 107 CA VAL 8 1.537 34.920 7.515 1.00 2.40 ATOM 109 CB VAL 8 1.342 35.483 8.948 1.00 2.40 ATOM 111 CG1 VAL 8 -0.148 35.450 9.271 1.00 2.40 ATOM 115 CG2 VAL 8 2.070 34.734 10.083 1.00 2.40 ATOM 119 C VAL 8 1.508 36.012 6.437 1.00 2.40 ATOM 120 O VAL 8 0.814 37.016 6.582 1.00 2.40 ATOM 121 N GLY 9 2.236 35.831 5.324 1.00 2.27 ATOM 123 CA GLY 9 2.104 36.718 4.156 1.00 2.27 ATOM 126 C GLY 9 0.731 36.610 3.512 1.00 2.27 ATOM 127 O GLY 9 0.162 35.525 3.516 1.00 2.27 ATOM 128 N SER 10 0.188 37.687 2.923 1.00 2.17 ATOM 130 CA SER 10 -1.225 37.699 2.485 1.00 2.17 ATOM 132 CB SER 10 -1.757 39.106 2.178 1.00 2.17 ATOM 135 OG SER 10 -0.731 40.073 2.181 1.00 2.17 ATOM 137 C SER 10 -1.626 36.552 1.527 1.00 2.17 ATOM 138 O SER 10 -2.719 36.004 1.690 1.00 2.17 ATOM 139 N SER 11 -0.650 36.126 0.697 1.00 2.06 ATOM 141 CA SER 11 -0.347 34.774 0.163 1.00 2.06 ATOM 143 CB SER 11 1.210 34.739 0.149 1.00 2.06 ATOM 146 OG SER 11 1.759 33.515 -0.335 1.00 2.06 ATOM 148 C SER 11 -0.876 33.657 1.067 1.00 2.06 ATOM 149 O SER 11 -2.048 33.296 1.101 1.00 2.06 ATOM 150 N TYR 12 0.024 33.204 1.925 1.00 1.62 ATOM 152 CA TYR 12 -0.132 32.150 2.864 1.00 1.62 ATOM 154 CB TYR 12 1.106 32.170 3.777 1.00 1.62 ATOM 157 CG TYR 12 1.390 30.862 4.483 1.00 1.62 ATOM 158 CD1 TYR 12 2.433 30.029 4.033 1.00 1.62 ATOM 160 CE1 TYR 12 2.717 28.828 4.711 1.00 1.62 ATOM 162 CZ TYR 12 1.944 28.458 5.829 1.00 1.62 ATOM 163 OH TYR 12 2.233 27.325 6.514 1.00 1.62 ATOM 165 CE2 TYR 12 0.876 29.271 6.253 1.00 1.62 ATOM 167 CD2 TYR 12 0.609 30.477 5.586 1.00 1.62 ATOM 169 C TYR 12 -1.437 32.227 3.671 1.00 1.62 ATOM 170 O TYR 12 -2.081 31.213 3.912 1.00 1.62 ATOM 171 N VAL 13 -1.863 33.432 4.045 1.00 1.43 ATOM 173 CA VAL 13 -3.093 33.726 4.787 1.00 1.43 ATOM 175 CB VAL 13 -3.098 35.241 5.113 1.00 1.43 ATOM 177 CG1 VAL 13 -4.436 35.828 5.567 1.00 1.43 ATOM 181 CG2 VAL 13 -2.075 35.554 6.207 1.00 1.43 ATOM 185 C VAL 13 -4.362 33.358 4.048 1.00 1.43 ATOM 186 O VAL 13 -5.236 32.759 4.678 1.00 1.43 ATOM 187 N ALA 14 -4.486 33.700 2.751 1.00 1.69 ATOM 189 CA ALA 14 -5.589 33.144 1.971 1.00 1.69 ATOM 191 CB ALA 14 -6.684 34.126 1.531 1.00 1.69 ATOM 195 C ALA 14 -5.424 31.660 1.547 1.00 1.69 ATOM 196 O ALA 14 -6.373 30.885 1.659 1.00 1.69 ATOM 197 N GLU 15 -4.194 31.204 1.288 1.00 1.65 ATOM 199 CA GLU 15 -3.856 29.835 0.838 1.00 1.65 ATOM 201 CB GLU 15 -2.405 29.834 0.277 1.00 1.65 ATOM 204 CG GLU 15 -1.291 29.122 1.056 1.00 1.65 ATOM 207 CD GLU 15 0.095 29.373 0.421 1.00 1.65 ATOM 208 OE1 GLU 15 0.469 30.544 0.116 1.00 1.65 ATOM 209 OE2 GLU 15 0.797 28.369 0.157 1.00 1.65 ATOM 210 C GLU 15 -4.063 28.764 1.923 1.00 1.65 ATOM 211 O GLU 15 -4.187 27.579 1.611 1.00 1.65 ATOM 212 N THR 16 -4.152 29.203 3.183 1.00 1.68 ATOM 214 CA THR 16 -4.493 28.403 4.364 1.00 1.68 ATOM 216 CB THR 16 -3.326 28.306 5.366 1.00 1.68 ATOM 218 CG2 THR 16 -2.087 27.639 4.773 1.00 1.68 ATOM 222 OG1 THR 16 -2.935 29.576 5.817 1.00 1.68 ATOM 224 C THR 16 -5.766 28.876 5.086 1.00 1.68 ATOM 225 O THR 16 -6.204 28.245 6.055 1.00 1.68 ATOM 226 N GLY 17 -6.430 29.925 4.579 1.00 1.92 ATOM 228 CA GLY 17 -7.756 30.307 5.062 1.00 1.92 ATOM 231 C GLY 17 -7.741 31.168 6.336 1.00 1.92 ATOM 232 O GLY 17 -6.746 31.339 7.049 1.00 1.92 ATOM 233 N GLN 18 -8.904 31.750 6.641 1.00 2.03 ATOM 235 CA GLN 18 -9.018 32.733 7.724 1.00 2.03 ATOM 237 CB GLN 18 -10.239 33.644 7.521 1.00 2.03 ATOM 240 CG GLN 18 -10.166 34.458 6.209 1.00 2.03 ATOM 243 CD GLN 18 -8.959 35.399 6.126 1.00 2.03 ATOM 244 OE1 GLN 18 -8.994 36.537 6.564 1.00 2.03 ATOM 245 NE2 GLN 18 -7.846 34.973 5.559 1.00 2.03 ATOM 248 C GLN 18 -8.910 32.129 9.142 1.00 2.03 ATOM 249 O GLN 18 -8.548 32.832 10.082 1.00 2.03 ATOM 250 N ASN 19 -9.088 30.813 9.289 1.00 1.84 ATOM 252 CA ASN 19 -8.749 30.071 10.508 1.00 1.84 ATOM 254 CB ASN 19 -9.170 28.592 10.351 1.00 1.84 ATOM 257 CG ASN 19 -10.614 28.400 9.916 1.00 1.84 ATOM 258 OD1 ASN 19 -10.999 28.799 8.829 1.00 1.84 ATOM 259 ND2 ASN 19 -11.452 27.781 10.721 1.00 1.84 ATOM 262 C ASN 19 -7.244 30.174 10.826 1.00 1.84 ATOM 263 O ASN 19 -6.875 30.489 11.961 1.00 1.84 ATOM 264 N TRP 20 -6.381 29.951 9.820 1.00 1.49 ATOM 266 CA TRP 20 -4.939 30.161 9.969 1.00 1.49 ATOM 268 CB TRP 20 -4.145 29.553 8.811 1.00 1.49 ATOM 271 CG TRP 20 -2.662 29.730 8.971 1.00 1.49 ATOM 272 CD1 TRP 20 -1.956 30.792 8.518 1.00 1.49 ATOM 274 NE1 TRP 20 -0.639 30.684 8.915 1.00 1.49 ATOM 276 CE2 TRP 20 -0.418 29.527 9.626 1.00 1.49 ATOM 277 CZ2 TRP 20 0.730 28.974 10.211 1.00 1.49 ATOM 279 CH2 TRP 20 0.637 27.729 10.858 1.00 1.49 ATOM 281 CZ3 TRP 20 -0.597 27.054 10.894 1.00 1.49 ATOM 283 CE3 TRP 20 -1.743 27.622 10.303 1.00 1.49 ATOM 285 CD2 TRP 20 -1.689 28.879 9.658 1.00 1.49 ATOM 286 C TRP 20 -4.598 31.644 10.132 1.00 1.49 ATOM 287 O TRP 20 -3.747 31.975 10.952 1.00 1.49 ATOM 288 N ALA 21 -5.298 32.556 9.443 1.00 1.48 ATOM 290 CA ALA 21 -5.119 33.997 9.675 1.00 1.48 ATOM 292 CB ALA 21 -6.090 34.780 8.784 1.00 1.48 ATOM 296 C ALA 21 -5.279 34.395 11.160 1.00 1.48 ATOM 297 O ALA 21 -4.374 35.016 11.722 1.00 1.48 ATOM 298 N SER 22 -6.382 33.998 11.810 1.00 1.22 ATOM 300 CA SER 22 -6.581 34.258 13.248 1.00 1.22 ATOM 302 CB SER 22 -8.017 33.986 13.702 1.00 1.22 ATOM 305 OG SER 22 -8.744 35.195 13.649 1.00 1.22 ATOM 307 C SER 22 -5.589 33.512 14.144 1.00 1.22 ATOM 308 O SER 22 -5.055 34.120 15.070 1.00 1.22 ATOM 309 N LEU 23 -5.265 32.240 13.862 1.00 1.30 ATOM 311 CA LEU 23 -4.229 31.521 14.630 1.00 1.30 ATOM 313 CB LEU 23 -4.060 30.118 14.010 1.00 1.30 ATOM 316 CG LEU 23 -2.976 29.241 14.667 1.00 1.30 ATOM 318 CD1 LEU 23 -3.316 28.883 16.114 1.00 1.30 ATOM 322 CD2 LEU 23 -2.822 27.945 13.869 1.00 1.30 ATOM 326 C LEU 23 -2.896 32.291 14.665 1.00 1.30 ATOM 327 O LEU 23 -2.287 32.478 15.718 1.00 1.30 ATOM 328 N ALA 24 -2.478 32.780 13.502 1.00 1.37 ATOM 330 CA ALA 24 -1.248 33.531 13.336 1.00 1.37 ATOM 332 CB ALA 24 -0.943 33.573 11.847 1.00 1.37 ATOM 336 C ALA 24 -1.307 34.936 13.954 1.00 1.37 ATOM 337 O ALA 24 -0.295 35.388 14.476 1.00 1.37 ATOM 338 N ALA 25 -2.449 35.633 13.952 1.00 1.02 ATOM 340 CA ALA 25 -2.601 36.901 14.681 1.00 1.02 ATOM 342 CB ALA 25 -3.970 37.505 14.340 1.00 1.02 ATOM 346 C ALA 25 -2.406 36.716 16.193 1.00 1.02 ATOM 347 O ALA 25 -1.543 37.370 16.804 1.00 1.02 ATOM 348 N ASN 26 -3.138 35.746 16.754 1.00 1.47 ATOM 350 CA ASN 26 -3.049 35.406 18.164 1.00 1.47 ATOM 352 CB ASN 26 -4.083 34.326 18.515 1.00 1.47 ATOM 355 CG ASN 26 -4.698 34.640 19.863 1.00 1.47 ATOM 356 OD1 ASN 26 -4.179 34.311 20.914 1.00 1.47 ATOM 357 ND2 ASN 26 -5.786 35.369 19.878 1.00 1.47 ATOM 360 C ASN 26 -1.621 35.024 18.573 1.00 1.47 ATOM 361 O ASN 26 -1.126 35.534 19.576 1.00 1.47 ATOM 362 N GLU 27 -0.911 34.237 17.757 1.00 1.94 ATOM 364 CA GLU 27 0.493 33.882 18.012 1.00 1.94 ATOM 366 CB GLU 27 0.874 32.625 17.211 1.00 1.94 ATOM 369 CG GLU 27 0.188 31.361 17.765 1.00 1.94 ATOM 372 CD GLU 27 0.487 31.189 19.257 1.00 1.94 ATOM 373 OE1 GLU 27 1.668 30.999 19.612 1.00 1.94 ATOM 374 OE2 GLU 27 -0.394 31.428 20.112 1.00 1.94 ATOM 375 C GLU 27 1.493 35.032 17.819 1.00 1.94 ATOM 376 O GLU 27 2.497 35.084 18.532 1.00 1.94 ATOM 377 N LEU 28 1.201 36.014 16.959 1.00 1.85 ATOM 379 CA LEU 28 1.954 37.278 16.885 1.00 1.85 ATOM 381 CB LEU 28 1.736 37.930 15.494 1.00 1.85 ATOM 384 CG LEU 28 2.819 37.590 14.450 1.00 1.85 ATOM 386 CD1 LEU 28 2.951 36.097 14.145 1.00 1.85 ATOM 390 CD2 LEU 28 2.548 38.306 13.123 1.00 1.85 ATOM 394 C LEU 28 1.583 38.242 18.023 1.00 1.85 ATOM 395 O LEU 28 2.176 39.316 18.128 1.00 1.85 ATOM 396 N ARG 29 0.611 37.864 18.868 1.00 2.01 ATOM 398 CA ARG 29 0.010 38.680 19.934 1.00 2.01 ATOM 400 CB ARG 29 1.002 38.842 21.115 1.00 2.01 ATOM 403 CG ARG 29 1.788 37.579 21.522 1.00 2.01 ATOM 406 CD ARG 29 0.913 36.425 22.031 1.00 2.01 ATOM 409 NE ARG 29 1.634 35.139 21.946 1.00 2.01 ATOM 411 CZ ARG 29 1.115 33.948 21.682 1.00 2.01 ATOM 412 NH1 ARG 29 1.904 32.926 21.527 1.00 2.01 ATOM 415 NH2 ARG 29 -0.157 33.730 21.542 1.00 2.01 ATOM 418 C ARG 29 -0.516 40.016 19.397 1.00 2.01 ATOM 419 O ARG 29 -0.558 41.003 20.131 1.00 2.01 ATOM 420 N VAL 30 -0.913 40.057 18.121 1.00 1.61 ATOM 422 CA VAL 30 -1.333 41.288 17.432 1.00 1.61 ATOM 424 CB VAL 30 -0.394 41.607 16.251 1.00 1.61 ATOM 426 CG1 VAL 30 -0.722 40.847 14.962 1.00 1.61 ATOM 430 CG2 VAL 30 -0.379 43.116 15.981 1.00 1.61 ATOM 434 C VAL 30 -2.810 41.162 17.071 1.00 1.61 ATOM 435 O VAL 30 -3.294 40.062 16.827 1.00 1.61 ATOM 436 N THR 31 -3.546 42.272 17.153 1.00 2.11 ATOM 438 CA THR 31 -4.967 42.288 17.549 1.00 2.11 ATOM 440 CB THR 31 -5.334 43.641 18.193 1.00 2.11 ATOM 442 CG2 THR 31 -4.714 43.763 19.586 1.00 2.11 ATOM 446 OG1 THR 31 -4.836 44.746 17.460 1.00 2.11 ATOM 448 C THR 31 -5.998 41.852 16.491 1.00 2.11 ATOM 449 O THR 31 -6.730 42.688 15.967 1.00 2.11 ATOM 450 N GLU 32 -6.079 40.543 16.218 1.00 3.59 ATOM 452 CA GLU 32 -7.049 39.839 15.355 1.00 3.59 ATOM 454 CB GLU 32 -8.274 39.358 16.159 1.00 3.59 ATOM 457 CG GLU 32 -7.932 38.293 17.219 1.00 3.59 ATOM 460 CD GLU 32 -7.284 37.014 16.653 1.00 3.59 ATOM 461 OE1 GLU 32 -7.545 36.662 15.475 1.00 3.59 ATOM 462 OE2 GLU 32 -6.498 36.403 17.409 1.00 3.59 ATOM 463 C GLU 32 -7.412 40.580 14.052 1.00 3.59 ATOM 464 O GLU 32 -8.576 40.744 13.692 1.00 3.59 ATOM 465 N ARG 33 -6.390 41.076 13.339 1.00 2.41 ATOM 467 CA ARG 33 -6.532 41.894 12.123 1.00 2.41 ATOM 469 CB ARG 33 -6.369 43.380 12.483 1.00 2.41 ATOM 472 CG ARG 33 -7.634 43.963 13.141 1.00 2.41 ATOM 475 CD ARG 33 -7.315 45.198 13.990 1.00 2.41 ATOM 478 NE ARG 33 -8.505 45.668 14.732 1.00 2.41 ATOM 480 CZ ARG 33 -9.321 46.651 14.398 1.00 2.41 ATOM 481 NH1 ARG 33 -10.332 46.967 15.159 1.00 2.41 ATOM 484 NH2 ARG 33 -9.148 47.337 13.302 1.00 2.41 ATOM 487 C ARG 33 -5.536 41.425 11.032 1.00 2.41 ATOM 488 O ARG 33 -4.321 41.691 11.118 1.00 2.41 ATOM 489 N PRO 34 -6.029 40.724 9.989 1.00 1.97 ATOM 490 CD PRO 34 -7.384 40.190 9.861 1.00 1.97 ATOM 493 CG PRO 34 -7.320 39.112 8.780 1.00 1.97 ATOM 496 CB PRO 34 -6.188 39.608 7.888 1.00 1.97 ATOM 499 CA PRO 34 -5.207 40.225 8.889 1.00 1.97 ATOM 501 C PRO 34 -4.290 41.262 8.205 1.00 1.97 ATOM 502 O PRO 34 -3.216 40.909 7.715 1.00 1.97 ATOM 503 N PHE 35 -4.663 42.546 8.209 1.00 1.79 ATOM 505 CA PHE 35 -3.777 43.635 7.777 1.00 1.79 ATOM 507 CB PHE 35 -4.548 44.964 7.748 1.00 1.79 ATOM 510 CG PHE 35 -3.687 46.144 7.328 1.00 1.79 ATOM 511 CD1 PHE 35 -3.048 46.138 6.073 1.00 1.79 ATOM 513 CE1 PHE 35 -2.192 47.192 5.707 1.00 1.79 ATOM 515 CZ PHE 35 -1.972 48.258 6.592 1.00 1.79 ATOM 517 CE2 PHE 35 -2.617 48.277 7.841 1.00 1.79 ATOM 519 CD2 PHE 35 -3.474 47.223 8.209 1.00 1.79 ATOM 521 C PHE 35 -2.484 43.761 8.608 1.00 1.79 ATOM 522 O PHE 35 -1.389 43.815 8.031 1.00 1.79 ATOM 523 N TRP 36 -2.613 43.730 9.949 1.00 1.58 ATOM 525 CA TRP 36 -1.471 43.689 10.867 1.00 1.58 ATOM 527 CB TRP 36 -1.880 43.520 12.342 1.00 1.58 ATOM 530 CG TRP 36 -2.741 44.520 13.057 1.00 1.58 ATOM 531 CD1 TRP 36 -3.364 44.231 14.218 1.00 1.58 ATOM 533 NE1 TRP 36 -4.007 45.345 14.708 1.00 1.58 ATOM 535 CE2 TRP 36 -3.860 46.419 13.860 1.00 1.58 ATOM 536 CZ2 TRP 36 -4.326 47.740 13.914 1.00 1.58 ATOM 538 CH2 TRP 36 -3.984 48.627 12.881 1.00 1.58 ATOM 540 CZ3 TRP 36 -3.182 48.182 11.815 1.00 1.58 ATOM 542 CE3 TRP 36 -2.720 46.851 11.770 1.00 1.58 ATOM 544 CD2 TRP 36 -3.046 45.928 12.788 1.00 1.58 ATOM 545 C TRP 36 -0.566 42.514 10.524 1.00 1.58 ATOM 546 O TRP 36 0.621 42.730 10.301 1.00 1.58 ATOM 547 N ILE 37 -1.109 41.285 10.474 1.00 1.18 ATOM 549 CA ILE 37 -0.202 40.128 10.251 1.00 1.18 ATOM 551 CB ILE 37 -0.861 38.769 10.539 1.00 1.18 ATOM 553 CG2 ILE 37 -1.260 38.701 12.016 1.00 1.18 ATOM 557 CG1 ILE 37 -2.038 38.483 9.591 1.00 1.18 ATOM 560 CD1 ILE 37 -3.012 37.365 9.989 1.00 1.18 ATOM 564 C ILE 37 0.505 40.154 8.883 1.00 1.18 ATOM 565 O ILE 37 1.707 39.889 8.790 1.00 1.18 ATOM 566 N SER 38 -0.224 40.563 7.834 1.00 1.39 ATOM 568 CA SER 38 0.324 40.694 6.476 1.00 1.39 ATOM 570 CB SER 38 -0.747 41.171 5.481 1.00 1.39 ATOM 573 OG SER 38 -1.895 40.325 5.498 1.00 1.39 ATOM 575 C SER 38 1.538 41.628 6.511 1.00 1.39 ATOM 576 O SER 38 2.654 41.217 6.188 1.00 1.39 ATOM 577 N SER 39 1.331 42.834 7.054 1.00 1.66 ATOM 579 CA SER 39 2.377 43.847 7.255 1.00 1.66 ATOM 581 CB SER 39 1.777 45.080 7.933 1.00 1.66 ATOM 584 OG SER 39 0.645 45.525 7.202 1.00 1.66 ATOM 586 C SER 39 3.594 43.299 8.021 1.00 1.66 ATOM 587 O SER 39 4.719 43.391 7.537 1.00 1.66 ATOM 588 N PHE 40 3.369 42.638 9.160 1.00 1.63 ATOM 590 CA PHE 40 4.422 42.064 10.012 1.00 1.63 ATOM 592 CB PHE 40 3.815 41.671 11.373 1.00 1.63 ATOM 595 CG PHE 40 3.491 42.784 12.363 1.00 1.63 ATOM 596 CD1 PHE 40 3.257 42.430 13.706 1.00 1.63 ATOM 598 CE1 PHE 40 2.971 43.413 14.669 1.00 1.63 ATOM 600 CZ PHE 40 2.907 44.765 14.291 1.00 1.63 ATOM 602 CE2 PHE 40 3.140 45.131 12.955 1.00 1.63 ATOM 604 CD2 PHE 40 3.439 44.146 11.994 1.00 1.63 ATOM 606 C PHE 40 5.178 40.859 9.418 1.00 1.63 ATOM 607 O PHE 40 6.210 40.463 9.989 1.00 1.63 ATOM 608 N ILE 41 4.700 40.293 8.298 1.00 1.86 ATOM 610 CA ILE 41 5.494 39.327 7.521 1.00 1.86 ATOM 612 CB ILE 41 4.645 38.082 7.170 1.00 1.86 ATOM 614 CG2 ILE 41 5.258 37.263 6.016 1.00 1.86 ATOM 618 CG1 ILE 41 4.514 37.081 8.341 1.00 1.86 ATOM 621 CD1 ILE 41 4.158 37.610 9.733 1.00 1.86 ATOM 625 C ILE 41 6.165 40.003 6.311 1.00 1.86 ATOM 626 O ILE 41 7.233 39.553 5.900 1.00 1.86 ATOM 627 N GLY 42 5.586 41.077 5.752 1.00 2.32 ATOM 629 CA GLY 42 6.091 41.855 4.610 1.00 2.32 ATOM 632 C GLY 42 6.671 41.081 3.411 1.00 2.32 ATOM 633 O GLY 42 7.548 41.597 2.724 1.00 2.32 ATOM 634 N ARG 43 6.178 39.863 3.161 1.00 2.54 ATOM 636 CA ARG 43 6.709 38.728 2.360 1.00 2.54 ATOM 638 CB ARG 43 5.580 37.678 2.191 1.00 2.54 ATOM 641 CG ARG 43 6.034 36.253 2.565 1.00 2.54 ATOM 644 CD ARG 43 6.812 35.515 1.466 1.00 2.54 ATOM 647 NE ARG 43 5.899 34.837 0.530 1.00 2.54 ATOM 649 CZ ARG 43 5.441 35.263 -0.630 1.00 2.54 ATOM 650 NH1 ARG 43 4.625 34.504 -1.280 1.00 2.54 ATOM 653 NH2 ARG 43 5.745 36.397 -1.193 1.00 2.54 ATOM 656 C ARG 43 7.609 38.933 1.128 1.00 2.54 ATOM 657 O ARG 43 7.258 38.432 0.053 1.00 2.54 ATOM 658 N SER 44 8.768 39.571 1.350 1.00 5.42 ATOM 660 CA SER 44 10.083 39.482 0.661 1.00 5.42 ATOM 662 CB SER 44 10.117 38.452 -0.485 1.00 5.42 ATOM 665 OG SER 44 9.855 37.140 0.005 1.00 5.42 ATOM 667 C SER 44 10.662 40.837 0.182 1.00 5.42 ATOM 668 O SER 44 11.817 40.861 -0.237 1.00 5.42 ATOM 669 N LYS 45 9.911 41.948 0.266 1.00 4.49 ATOM 671 CA LYS 45 10.414 43.344 0.185 1.00 4.49 ATOM 673 CB LYS 45 10.781 43.711 -1.266 1.00 4.49 ATOM 676 CG LYS 45 11.378 45.121 -1.402 1.00 4.49 ATOM 679 CD LYS 45 10.546 46.052 -2.290 1.00 4.49 ATOM 682 CE LYS 45 9.146 46.331 -1.732 1.00 4.49 ATOM 685 NZ LYS 45 8.430 47.339 -2.544 1.00 4.49 ATOM 689 C LYS 45 9.411 44.323 0.832 1.00 4.49 ATOM 690 O LYS 45 9.808 45.063 1.721 1.00 4.49 TER END