####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS241_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS241_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 3 - 40 4.87 8.07 LCS_AVERAGE: 84.35 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 19 - 37 1.85 9.11 LCS_AVERAGE: 34.56 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 19 - 31 0.96 8.17 LCS_AVERAGE: 20.87 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 37 3 3 3 6 6 8 11 12 13 15 17 17 20 25 26 28 31 33 38 38 LCS_GDT V 3 V 3 3 7 38 3 3 4 6 8 9 12 16 18 21 25 29 30 35 36 36 37 38 38 39 LCS_GDT Q 4 Q 4 5 7 38 3 4 5 6 8 9 13 16 23 25 27 29 33 35 36 36 37 38 38 39 LCS_GDT G 5 G 5 5 7 38 2 4 5 8 12 15 19 23 26 27 31 33 33 35 36 36 37 38 38 39 LCS_GDT P 6 P 6 5 13 38 3 4 5 5 8 12 18 23 26 27 31 33 33 35 36 36 37 38 38 39 LCS_GDT W 7 W 7 12 17 38 3 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT V 8 V 8 12 17 38 6 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT G 9 G 9 12 17 38 6 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT S 10 S 10 12 17 38 6 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT S 11 S 11 12 17 38 6 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT Y 12 Y 12 12 17 38 6 11 12 13 16 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT V 13 V 13 12 17 38 6 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 14 A 14 12 17 38 6 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT E 15 E 15 12 17 38 3 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT T 16 T 16 12 17 38 6 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT G 17 G 17 12 17 38 6 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT Q 18 Q 18 12 17 38 3 3 12 13 14 17 19 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT N 19 N 19 13 19 38 6 12 12 14 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT W 20 W 20 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 21 A 21 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT S 22 S 22 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT L 23 L 23 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 24 A 24 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 25 A 25 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT N 26 N 26 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT E 27 E 27 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT L 28 L 28 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT R 29 R 29 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT V 30 V 30 13 19 38 5 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT T 31 T 31 13 19 38 3 7 11 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT E 32 E 32 6 19 38 4 6 6 10 13 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT R 33 R 33 6 19 38 4 7 11 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT P 34 P 34 6 19 38 4 7 8 13 17 18 20 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT F 35 F 35 6 19 38 4 6 11 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT W 36 W 36 6 19 38 4 6 11 14 17 18 20 24 26 27 30 33 33 35 36 36 37 38 38 39 LCS_GDT I 37 I 37 6 19 38 4 6 10 15 16 18 21 24 26 27 30 33 33 35 36 36 37 38 38 39 LCS_GDT S 38 S 38 5 9 38 4 4 6 7 10 14 20 22 24 27 29 30 31 34 36 36 37 38 38 39 LCS_GDT S 39 S 39 5 9 38 4 4 6 7 9 12 17 21 23 27 29 30 30 31 32 36 37 38 38 39 LCS_GDT F 40 F 40 5 9 38 4 4 6 7 9 12 14 20 23 27 29 30 30 31 32 34 37 38 38 39 LCS_GDT I 41 I 41 5 9 36 4 4 6 7 9 12 14 18 20 24 27 28 30 30 31 31 32 32 33 39 LCS_GDT G 42 G 42 4 9 34 3 4 4 6 9 10 12 13 17 18 22 24 27 28 31 31 32 32 33 33 LCS_GDT R 43 R 43 4 9 34 3 4 6 7 9 10 12 13 17 18 20 24 25 27 30 31 32 32 33 33 LCS_GDT S 44 S 44 3 9 33 3 3 4 4 9 10 12 13 15 15 17 20 23 26 27 29 32 32 33 33 LCS_GDT K 45 K 45 3 3 15 2 3 3 3 3 7 7 8 10 12 13 14 15 19 20 21 22 25 27 27 LCS_AVERAGE LCS_A: 46.59 ( 20.87 34.56 84.35 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 GDT PERCENT_AT 18.18 27.27 27.27 34.09 38.64 40.91 47.73 54.55 59.09 65.91 70.45 75.00 75.00 79.55 81.82 81.82 84.09 86.36 86.36 88.64 GDT RMS_LOCAL 0.28 0.55 0.55 1.34 1.46 1.60 2.32 2.62 2.85 3.40 3.64 3.83 3.83 4.19 4.41 4.41 4.66 4.87 4.87 5.26 GDT RMS_ALL_AT 7.98 8.02 8.02 8.97 9.34 9.16 7.99 8.20 8.19 8.69 8.61 8.47 8.47 8.46 8.31 8.31 8.18 8.07 8.07 7.93 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 15.759 0 0.640 0.604 17.359 0.000 0.000 - LGA V 3 V 3 11.008 0 0.123 1.071 12.151 0.000 0.000 8.337 LGA Q 4 Q 4 12.387 0 0.674 1.014 15.542 0.000 0.000 15.542 LGA G 5 G 5 10.498 0 0.035 0.035 10.989 0.000 0.000 - LGA P 6 P 6 9.050 0 0.086 0.424 12.278 0.000 0.000 11.735 LGA W 7 W 7 9.921 0 0.433 1.225 21.131 0.000 0.000 21.131 LGA V 8 V 8 8.645 0 0.123 0.176 9.685 0.000 0.000 8.608 LGA G 9 G 9 7.837 0 0.062 0.062 8.494 0.000 0.000 - LGA S 10 S 10 7.652 0 0.096 0.592 9.271 0.000 0.000 9.026 LGA S 11 S 11 4.762 0 0.015 0.682 6.031 14.545 10.000 4.692 LGA Y 12 Y 12 2.880 0 0.121 1.100 7.917 31.818 12.727 7.917 LGA V 13 V 13 3.425 0 0.062 1.007 7.520 13.182 10.390 7.520 LGA A 14 A 14 4.371 0 0.023 0.023 5.041 6.818 6.545 - LGA E 15 E 15 3.170 0 0.060 1.125 5.310 15.455 14.545 3.521 LGA T 16 T 16 4.092 0 0.107 1.149 6.013 5.909 12.208 2.233 LGA G 17 G 17 6.226 0 0.713 0.713 6.226 0.000 0.000 - LGA Q 18 Q 18 5.468 0 0.022 1.313 12.253 16.364 7.273 12.107 LGA N 19 N 19 1.737 0 0.658 1.526 7.770 47.727 24.545 7.770 LGA W 20 W 20 1.497 0 0.075 1.027 6.882 54.545 39.870 6.080 LGA A 21 A 21 2.425 0 0.042 0.047 3.014 38.182 34.182 - LGA S 22 S 22 2.250 0 0.105 0.142 2.400 41.364 40.303 2.375 LGA L 23 L 23 0.900 0 0.077 0.106 1.752 69.545 72.045 1.181 LGA A 24 A 24 1.586 0 0.029 0.029 1.997 54.545 53.818 - LGA A 25 A 25 2.242 0 0.021 0.025 2.502 38.182 36.000 - LGA N 26 N 26 1.600 0 0.061 0.091 2.298 58.182 52.955 2.298 LGA E 27 E 27 1.135 0 0.071 0.990 3.405 65.455 52.525 3.405 LGA L 28 L 28 1.152 0 0.073 0.141 1.621 65.455 63.636 1.621 LGA R 29 R 29 1.162 0 0.080 1.403 8.324 65.455 38.182 8.324 LGA V 30 V 30 1.325 0 0.252 1.158 3.602 65.909 51.948 3.602 LGA T 31 T 31 1.403 0 0.696 0.676 4.408 52.273 34.026 4.403 LGA E 32 E 32 3.844 0 0.589 1.259 11.030 25.909 11.515 11.030 LGA R 33 R 33 2.512 0 0.063 1.344 12.068 22.727 9.256 12.068 LGA P 34 P 34 3.667 0 0.086 0.393 6.696 13.636 8.052 6.696 LGA F 35 F 35 2.508 0 0.099 1.230 3.433 32.727 29.752 3.058 LGA W 36 W 36 3.753 0 0.652 1.274 14.435 14.545 4.156 14.162 LGA I 37 I 37 3.017 0 0.071 0.951 5.714 12.727 14.545 2.981 LGA S 38 S 38 6.766 0 0.119 0.653 9.018 0.455 0.303 8.142 LGA S 39 S 39 7.411 0 0.181 0.719 10.556 0.000 0.000 6.814 LGA F 40 F 40 7.844 0 0.119 1.085 11.079 0.000 0.000 9.535 LGA I 41 I 41 11.838 0 0.565 0.573 15.008 0.000 0.000 11.955 LGA G 42 G 42 16.497 0 0.150 0.150 19.214 0.000 0.000 - LGA R 43 R 43 16.486 0 0.650 1.300 17.098 0.000 0.000 16.601 LGA S 44 S 44 18.591 0 0.714 0.811 21.644 0.000 0.000 17.316 LGA K 45 K 45 22.457 0 0.149 0.350 25.050 0.000 0.000 20.950 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.589 7.767 8.625 21.446 16.939 9.247 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 24 2.62 49.432 46.887 0.882 LGA_LOCAL RMSD: 2.620 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.203 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.589 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.578785 * X + -0.656967 * Y + 0.483118 * Z + 1.058260 Y_new = -0.814328 * X + -0.434139 * Y + 0.385219 * Z + 27.514317 Z_new = -0.043336 * X + -0.616375 * Y + -0.786259 * Z + -15.048965 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.952891 0.043349 -2.476725 [DEG: -54.5966 2.4837 -141.9059 ] ZXZ: 2.243925 2.475528 -3.071401 [DEG: 128.5674 141.8373 -175.9783 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS241_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS241_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 24 2.62 46.887 7.59 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS241_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 20 N ALA 2 -2.402 45.511 12.338 1.00 0.00 ATOM 22 CA ALA 2 -2.718 44.780 13.558 1.00 0.00 ATOM 24 CB ALA 2 -3.404 43.477 13.238 1.00 0.00 ATOM 28 C ALA 2 -1.440 44.476 14.320 1.00 0.00 ATOM 29 O ALA 2 -1.427 44.388 15.552 1.00 0.00 ATOM 30 N VAL 3 -0.374 44.309 13.533 1.00 0.00 ATOM 32 CA VAL 3 0.976 43.960 13.921 1.00 0.00 ATOM 34 CB VAL 3 1.500 42.842 13.000 1.00 0.00 ATOM 36 CG1 VAL 3 0.696 41.581 13.085 1.00 0.00 ATOM 40 CG2 VAL 3 1.423 43.340 11.574 1.00 0.00 ATOM 44 C VAL 3 1.924 45.152 13.745 1.00 0.00 ATOM 45 O VAL 3 1.588 46.152 13.090 1.00 0.00 ATOM 46 N GLN 4 3.134 45.031 14.308 1.00 0.00 ATOM 48 CA GLN 4 4.172 46.067 14.197 1.00 0.00 ATOM 50 CB GLN 4 5.413 45.645 14.977 1.00 0.00 ATOM 53 CG GLN 4 5.186 45.478 16.471 1.00 0.00 ATOM 56 CD GLN 4 4.576 44.102 16.825 1.00 0.00 ATOM 57 OE1 GLN 4 3.772 43.543 16.075 1.00 0.00 ATOM 58 NE2 GLN 4 4.967 43.557 17.972 1.00 0.00 ATOM 61 C GLN 4 4.543 46.332 12.731 1.00 0.00 ATOM 62 O GLN 4 5.040 47.401 12.380 1.00 0.00 ATOM 63 N GLY 5 4.300 45.338 11.885 1.00 0.00 ATOM 65 CA GLY 5 4.527 45.426 10.456 1.00 0.00 ATOM 68 C GLY 5 4.423 44.052 9.778 1.00 0.00 ATOM 69 O GLY 5 4.436 43.013 10.449 1.00 0.00 ATOM 70 N PRO 6 4.373 44.007 8.435 1.00 0.00 ATOM 71 CD PRO 6 4.313 45.263 7.655 1.00 0.00 ATOM 74 CG PRO 6 3.957 44.753 6.276 1.00 0.00 ATOM 77 CB PRO 6 4.560 43.366 6.213 1.00 0.00 ATOM 80 CA PRO 6 4.326 42.803 7.617 1.00 0.00 ATOM 82 C PRO 6 5.436 41.827 7.996 1.00 0.00 ATOM 83 O PRO 6 5.263 40.615 7.858 1.00 0.00 ATOM 84 N TRP 7 6.573 42.351 8.469 1.00 0.00 ATOM 86 CA TRP 7 7.710 41.545 8.899 1.00 0.00 ATOM 88 CB TRP 7 8.879 42.461 9.271 1.00 0.00 ATOM 91 CG TRP 7 8.613 43.361 10.455 1.00 0.00 ATOM 92 CD1 TRP 7 8.137 44.635 10.407 1.00 0.00 ATOM 94 NE1 TRP 7 8.042 45.157 11.677 1.00 0.00 ATOM 96 CE2 TRP 7 8.456 44.207 12.575 1.00 0.00 ATOM 97 CZ2 TRP 7 8.539 44.261 13.956 1.00 0.00 ATOM 99 CH2 TRP 7 8.996 43.126 14.620 1.00 0.00 ATOM 101 CZ3 TRP 7 9.359 41.989 13.936 1.00 0.00 ATOM 103 CE3 TRP 7 9.283 41.938 12.552 1.00 0.00 ATOM 105 CD2 TRP 7 8.820 43.065 11.857 1.00 0.00 ATOM 106 C TRP 7 7.379 40.626 10.079 1.00 0.00 ATOM 107 O TRP 7 7.978 39.553 10.239 1.00 0.00 ATOM 108 N VAL 8 6.393 41.029 10.887 1.00 0.00 ATOM 110 CA VAL 8 5.980 40.256 12.046 1.00 0.00 ATOM 112 CB VAL 8 4.957 41.033 12.888 1.00 0.00 ATOM 114 CG1 VAL 8 4.439 40.175 14.012 1.00 0.00 ATOM 118 CG2 VAL 8 5.552 42.274 13.393 1.00 0.00 ATOM 122 C VAL 8 5.281 39.052 11.509 1.00 0.00 ATOM 123 O VAL 8 5.538 37.904 11.889 1.00 0.00 ATOM 124 N GLY 9 4.394 39.359 10.579 1.00 0.00 ATOM 126 CA GLY 9 3.581 38.377 9.903 1.00 0.00 ATOM 129 C GLY 9 4.417 37.374 9.140 1.00 0.00 ATOM 130 O GLY 9 4.246 36.161 9.284 1.00 0.00 ATOM 131 N SER 10 5.341 37.901 8.338 1.00 0.00 ATOM 133 CA SER 10 6.214 37.105 7.500 1.00 0.00 ATOM 135 CB SER 10 7.132 38.029 6.723 1.00 0.00 ATOM 138 OG SER 10 6.400 38.844 5.841 1.00 0.00 ATOM 140 C SER 10 7.054 36.162 8.348 1.00 0.00 ATOM 141 O SER 10 7.210 34.987 8.013 1.00 0.00 ATOM 142 N SER 11 7.564 36.653 9.479 1.00 0.00 ATOM 144 CA SER 11 8.356 35.804 10.342 1.00 0.00 ATOM 146 CB SER 11 8.937 36.632 11.473 1.00 0.00 ATOM 149 OG SER 11 9.823 37.608 10.987 1.00 0.00 ATOM 151 C SER 11 7.487 34.690 10.927 1.00 0.00 ATOM 152 O SER 11 7.879 33.516 10.954 1.00 0.00 ATOM 153 N TYR 12 6.270 35.045 11.350 1.00 0.00 ATOM 155 CA TYR 12 5.368 34.082 11.957 1.00 0.00 ATOM 157 CB TYR 12 4.035 34.747 12.302 1.00 0.00 ATOM 160 CG TYR 12 3.023 33.824 12.923 1.00 0.00 ATOM 161 CD1 TYR 12 3.127 33.506 14.258 1.00 0.00 ATOM 163 CE1 TYR 12 2.220 32.686 14.843 1.00 0.00 ATOM 165 CZ TYR 12 1.195 32.154 14.103 1.00 0.00 ATOM 166 OH TYR 12 0.282 31.305 14.705 1.00 0.00 ATOM 168 CE2 TYR 12 1.084 32.461 12.769 1.00 0.00 ATOM 170 CD2 TYR 12 1.994 33.297 12.170 1.00 0.00 ATOM 172 C TYR 12 5.107 32.917 11.032 1.00 0.00 ATOM 173 O TYR 12 5.319 31.756 11.403 1.00 0.00 ATOM 174 N VAL 13 4.676 33.237 9.819 1.00 0.00 ATOM 176 CA VAL 13 4.335 32.235 8.826 1.00 0.00 ATOM 178 CB VAL 13 3.571 32.913 7.683 1.00 0.00 ATOM 180 CG1 VAL 13 4.437 33.774 6.926 1.00 0.00 ATOM 184 CG2 VAL 13 2.936 31.880 6.779 1.00 0.00 ATOM 188 C VAL 13 5.547 31.452 8.337 1.00 0.00 ATOM 189 O VAL 13 5.451 30.247 8.092 1.00 0.00 ATOM 190 N ALA 14 6.721 32.093 8.276 1.00 0.00 ATOM 192 CA ALA 14 7.927 31.400 7.845 1.00 0.00 ATOM 194 CB ALA 14 9.107 32.358 7.855 1.00 0.00 ATOM 198 C ALA 14 8.227 30.202 8.741 1.00 0.00 ATOM 199 O ALA 14 8.682 29.162 8.254 1.00 0.00 ATOM 200 N GLU 15 7.959 30.333 10.043 1.00 0.00 ATOM 202 CA GLU 15 8.190 29.223 10.967 1.00 0.00 ATOM 204 CB GLU 15 8.755 29.731 12.299 1.00 0.00 ATOM 207 CG GLU 15 10.124 30.404 12.198 1.00 0.00 ATOM 210 CD GLU 15 10.683 30.846 13.545 1.00 0.00 ATOM 211 OE1 GLU 15 9.991 30.724 14.532 1.00 0.00 ATOM 212 OE2 GLU 15 11.807 31.293 13.580 1.00 0.00 ATOM 213 C GLU 15 6.924 28.383 11.231 1.00 0.00 ATOM 214 O GLU 15 7.019 27.195 11.548 1.00 0.00 ATOM 215 N THR 16 5.749 29.008 11.111 1.00 0.00 ATOM 217 CA THR 16 4.462 28.381 11.418 1.00 0.00 ATOM 219 CB THR 16 3.432 29.441 11.839 1.00 0.00 ATOM 221 CG2 THR 16 2.107 28.784 12.191 1.00 0.00 ATOM 225 OG1 THR 16 3.931 30.149 12.967 1.00 0.00 ATOM 227 C THR 16 3.837 27.567 10.289 1.00 0.00 ATOM 228 O THR 16 3.235 26.522 10.539 1.00 0.00 ATOM 229 N GLY 17 3.914 28.066 9.058 1.00 0.00 ATOM 231 CA GLY 17 3.202 27.437 7.966 1.00 0.00 ATOM 234 C GLY 17 1.767 27.933 8.008 1.00 0.00 ATOM 235 O GLY 17 1.507 29.011 8.554 1.00 0.00 ATOM 236 N GLN 18 0.845 27.173 7.420 1.00 0.00 ATOM 238 CA GLN 18 -0.540 27.614 7.332 1.00 0.00 ATOM 240 CB GLN 18 -1.359 26.637 6.484 1.00 0.00 ATOM 243 CG GLN 18 -0.971 26.644 5.011 1.00 0.00 ATOM 246 CD GLN 18 -1.749 25.637 4.150 1.00 0.00 ATOM 247 OE1 GLN 18 -1.340 25.366 3.003 1.00 0.00 ATOM 248 NE2 GLN 18 -2.841 25.092 4.674 1.00 0.00 ATOM 251 C GLN 18 -1.144 27.765 8.723 1.00 0.00 ATOM 252 O GLN 18 -0.860 26.986 9.635 1.00 0.00 ATOM 253 N ASN 19 -1.962 28.801 8.871 1.00 0.00 ATOM 255 CA ASN 19 -2.610 29.124 10.132 1.00 0.00 ATOM 257 CB ASN 19 -1.634 29.918 10.961 1.00 0.00 ATOM 260 CG ASN 19 -1.308 31.233 10.257 1.00 0.00 ATOM 261 OD1 ASN 19 -1.993 32.237 10.457 1.00 0.00 ATOM 262 ND2 ASN 19 -0.289 31.242 9.420 1.00 0.00 ATOM 265 C ASN 19 -3.849 29.954 9.873 1.00 0.00 ATOM 266 O ASN 19 -3.912 30.644 8.862 1.00 0.00 ATOM 267 N TRP 20 -4.801 29.980 10.794 1.00 0.00 ATOM 269 CA TRP 20 -5.928 30.887 10.603 1.00 0.00 ATOM 271 CB TRP 20 -7.174 30.431 11.328 1.00 0.00 ATOM 274 CG TRP 20 -7.736 29.191 10.784 1.00 0.00 ATOM 275 CD1 TRP 20 -7.608 28.711 9.514 1.00 0.00 ATOM 277 NE1 TRP 20 -8.266 27.519 9.398 1.00 0.00 ATOM 279 CE2 TRP 20 -8.830 27.207 10.609 1.00 0.00 ATOM 280 CZ2 TRP 20 -9.580 26.111 10.988 1.00 0.00 ATOM 282 CH2 TRP 20 -10.017 26.057 12.311 1.00 0.00 ATOM 284 CZ3 TRP 20 -9.722 27.052 13.206 1.00 0.00 ATOM 286 CE3 TRP 20 -8.976 28.152 12.823 1.00 0.00 ATOM 288 CD2 TRP 20 -8.520 28.230 11.503 1.00 0.00 ATOM 289 C TRP 20 -5.526 32.258 11.102 1.00 0.00 ATOM 290 O TRP 20 -4.796 32.371 12.092 1.00 0.00 ATOM 291 N ALA 21 -6.071 33.293 10.487 1.00 0.00 ATOM 293 CA ALA 21 -5.732 34.658 10.855 1.00 0.00 ATOM 295 CB ALA 21 -6.526 35.602 9.976 1.00 0.00 ATOM 299 C ALA 21 -6.001 34.976 12.321 1.00 0.00 ATOM 300 O ALA 21 -5.194 35.646 12.976 1.00 0.00 ATOM 301 N SER 22 -7.098 34.455 12.866 1.00 0.00 ATOM 303 CA SER 22 -7.421 34.734 14.259 1.00 0.00 ATOM 305 CB SER 22 -8.884 34.410 14.515 1.00 0.00 ATOM 308 OG SER 22 -9.130 33.030 14.442 1.00 0.00 ATOM 310 C SER 22 -6.507 33.958 15.220 1.00 0.00 ATOM 311 O SER 22 -6.341 34.321 16.389 1.00 0.00 ATOM 312 N LEU 23 -5.860 32.904 14.729 1.00 0.00 ATOM 314 CA LEU 23 -4.989 32.139 15.598 1.00 0.00 ATOM 316 CB LEU 23 -4.762 30.725 15.049 1.00 0.00 ATOM 319 CG LEU 23 -5.996 29.814 15.020 1.00 0.00 ATOM 321 CD1 LEU 23 -5.649 28.516 14.285 1.00 0.00 ATOM 325 CD2 LEU 23 -6.438 29.521 16.432 1.00 0.00 ATOM 329 C LEU 23 -3.691 32.892 15.675 1.00 0.00 ATOM 330 O LEU 23 -3.118 33.056 16.758 1.00 0.00 ATOM 331 N ALA 24 -3.258 33.403 14.519 1.00 0.00 ATOM 333 CA ALA 24 -2.035 34.174 14.455 1.00 0.00 ATOM 335 CB ALA 24 -1.725 34.562 13.030 1.00 0.00 ATOM 339 C ALA 24 -2.163 35.415 15.308 1.00 0.00 ATOM 340 O ALA 24 -1.251 35.769 16.048 1.00 0.00 ATOM 341 N ALA 25 -3.335 36.066 15.264 1.00 0.00 ATOM 343 CA ALA 25 -3.490 37.263 16.072 1.00 0.00 ATOM 345 CB ALA 25 -4.845 37.903 15.857 1.00 0.00 ATOM 349 C ALA 25 -3.328 36.951 17.541 1.00 0.00 ATOM 350 O ALA 25 -2.664 37.683 18.290 1.00 0.00 ATOM 351 N ASN 26 -3.856 35.817 17.978 1.00 0.00 ATOM 353 CA ASN 26 -3.714 35.510 19.381 1.00 0.00 ATOM 355 CB ASN 26 -4.675 34.399 19.758 1.00 0.00 ATOM 358 CG ASN 26 -6.108 34.881 19.806 1.00 0.00 ATOM 359 OD1 ASN 26 -6.376 36.086 19.916 1.00 0.00 ATOM 360 ND2 ASN 26 -7.033 33.961 19.722 1.00 0.00 ATOM 363 C ASN 26 -2.267 35.149 19.727 1.00 0.00 ATOM 364 O ASN 26 -1.699 35.718 20.662 1.00 0.00 ATOM 365 N GLU 27 -1.642 34.265 18.949 1.00 0.00 ATOM 367 CA GLU 27 -0.278 33.842 19.266 1.00 0.00 ATOM 369 CB GLU 27 0.179 32.701 18.350 1.00 0.00 ATOM 372 CG GLU 27 1.544 32.116 18.734 1.00 0.00 ATOM 375 CD GLU 27 1.916 30.857 17.985 1.00 0.00 ATOM 376 OE1 GLU 27 1.160 30.433 17.134 1.00 0.00 ATOM 377 OE2 GLU 27 2.959 30.324 18.261 1.00 0.00 ATOM 378 C GLU 27 0.724 35.006 19.238 1.00 0.00 ATOM 379 O GLU 27 1.613 35.100 20.087 1.00 0.00 ATOM 380 N LEU 28 0.550 35.918 18.285 1.00 0.00 ATOM 382 CA LEU 28 1.419 37.078 18.132 1.00 0.00 ATOM 384 CB LEU 28 1.305 37.619 16.704 1.00 0.00 ATOM 387 CG LEU 28 1.857 36.755 15.611 1.00 0.00 ATOM 389 CD1 LEU 28 1.475 37.347 14.242 1.00 0.00 ATOM 393 CD2 LEU 28 3.359 36.719 15.795 1.00 0.00 ATOM 397 C LEU 28 1.113 38.214 19.103 1.00 0.00 ATOM 398 O LEU 28 1.861 39.189 19.160 1.00 0.00 ATOM 399 N ARG 29 0.024 38.094 19.877 1.00 0.00 ATOM 401 CA ARG 29 -0.418 39.143 20.786 1.00 0.00 ATOM 403 CB ARG 29 0.598 39.342 21.913 1.00 0.00 ATOM 406 CG ARG 29 0.481 38.342 23.066 1.00 0.00 ATOM 409 CD ARG 29 0.960 36.955 22.687 1.00 0.00 ATOM 412 NE ARG 29 0.964 36.058 23.847 1.00 0.00 ATOM 414 CZ ARG 29 1.261 34.728 23.843 1.00 0.00 ATOM 415 NH1 ARG 29 1.586 34.089 22.736 1.00 0.00 ATOM 418 NH2 ARG 29 1.220 34.058 24.982 1.00 0.00 ATOM 421 C ARG 29 -0.672 40.466 20.045 1.00 0.00 ATOM 422 O ARG 29 -0.237 41.534 20.480 1.00 0.00 ATOM 423 N VAL 30 -1.395 40.372 18.918 1.00 0.00 ATOM 425 CA VAL 30 -1.724 41.511 18.054 1.00 0.00 ATOM 427 CB VAL 30 -0.956 41.398 16.731 1.00 0.00 ATOM 429 CG1 VAL 30 0.552 41.428 17.022 1.00 0.00 ATOM 433 CG2 VAL 30 -1.357 40.166 16.063 1.00 0.00 ATOM 437 C VAL 30 -3.232 41.605 17.825 1.00 0.00 ATOM 438 O VAL 30 -3.989 40.772 18.333 1.00 0.00 ATOM 439 N THR 31 -3.698 42.660 17.155 1.00 0.00 ATOM 441 CA THR 31 -5.143 42.792 16.960 1.00 0.00 ATOM 443 CB THR 31 -5.625 44.231 16.687 1.00 0.00 ATOM 445 CG2 THR 31 -4.927 45.181 17.640 1.00 0.00 ATOM 449 OG1 THR 31 -5.287 44.608 15.362 1.00 0.00 ATOM 451 C THR 31 -5.556 41.960 15.759 1.00 0.00 ATOM 452 O THR 31 -4.730 41.289 15.145 1.00 0.00 ATOM 453 N GLU 32 -6.839 41.983 15.452 1.00 0.00 ATOM 455 CA GLU 32 -7.354 41.275 14.295 1.00 0.00 ATOM 457 CB GLU 32 -8.668 40.582 14.636 1.00 0.00 ATOM 460 CG GLU 32 -8.543 39.475 15.665 1.00 0.00 ATOM 463 CD GLU 32 -9.861 38.810 15.931 1.00 0.00 ATOM 464 OE1 GLU 32 -10.842 39.505 16.105 1.00 0.00 ATOM 465 OE2 GLU 32 -9.905 37.603 15.942 1.00 0.00 ATOM 466 C GLU 32 -7.550 42.183 13.068 1.00 0.00 ATOM 467 O GLU 32 -8.241 41.803 12.121 1.00 0.00 ATOM 468 N ARG 33 -7.059 43.430 13.113 1.00 0.00 ATOM 470 CA ARG 33 -7.274 44.282 11.946 1.00 0.00 ATOM 472 CB ARG 33 -8.691 44.851 11.979 1.00 0.00 ATOM 475 CG ARG 33 -9.123 45.606 10.723 1.00 0.00 ATOM 478 CD ARG 33 -10.570 45.964 10.762 1.00 0.00 ATOM 481 NE ARG 33 -10.863 46.963 11.781 1.00 0.00 ATOM 483 CZ ARG 33 -12.104 47.366 12.126 1.00 0.00 ATOM 484 NH1 ARG 33 -13.155 46.847 11.530 1.00 0.00 ATOM 487 NH2 ARG 33 -12.266 48.283 13.066 1.00 0.00 ATOM 490 C ARG 33 -6.291 45.452 11.788 1.00 0.00 ATOM 491 O ARG 33 -5.999 46.155 12.760 1.00 0.00 ATOM 492 N PRO 34 -5.758 45.664 10.564 1.00 0.00 ATOM 493 CD PRO 34 -5.170 46.968 10.340 1.00 0.00 ATOM 496 CG PRO 34 -4.462 46.784 9.004 1.00 0.00 ATOM 499 CB PRO 34 -5.254 45.739 8.284 1.00 0.00 ATOM 502 CA PRO 34 -5.754 44.800 9.388 1.00 0.00 ATOM 504 C PRO 34 -4.806 43.627 9.618 1.00 0.00 ATOM 505 O PRO 34 -3.758 43.777 10.253 1.00 0.00 ATOM 506 N PHE 35 -5.117 42.472 9.039 1.00 0.00 ATOM 508 CA PHE 35 -4.214 41.344 9.226 1.00 0.00 ATOM 510 CB PHE 35 -4.888 40.007 8.929 1.00 0.00 ATOM 513 CG PHE 35 -5.832 39.518 9.974 1.00 0.00 ATOM 514 CD1 PHE 35 -7.194 39.578 9.795 1.00 0.00 ATOM 516 CE1 PHE 35 -8.054 39.088 10.763 1.00 0.00 ATOM 518 CZ PHE 35 -7.563 38.539 11.906 1.00 0.00 ATOM 520 CE2 PHE 35 -6.215 38.483 12.099 1.00 0.00 ATOM 522 CD2 PHE 35 -5.344 38.967 11.147 1.00 0.00 ATOM 524 C PHE 35 -2.974 41.415 8.367 1.00 0.00 ATOM 525 O PHE 35 -3.032 41.688 7.165 1.00 0.00 ATOM 526 N TRP 36 -1.866 41.006 8.967 1.00 0.00 ATOM 528 CA TRP 36 -0.571 40.885 8.304 1.00 0.00 ATOM 530 CB TRP 36 0.445 40.349 9.280 1.00 0.00 ATOM 533 CG TRP 36 0.111 38.964 9.825 1.00 0.00 ATOM 534 CD1 TRP 36 -0.557 38.708 10.988 1.00 0.00 ATOM 536 NE1 TRP 36 -0.689 37.363 11.171 1.00 0.00 ATOM 538 CE2 TRP 36 -0.116 36.708 10.115 1.00 0.00 ATOM 539 CZ2 TRP 36 -0.020 35.358 9.850 1.00 0.00 ATOM 541 CH2 TRP 36 0.605 34.977 8.672 1.00 0.00 ATOM 543 CZ3 TRP 36 1.124 35.895 7.794 1.00 0.00 ATOM 545 CE3 TRP 36 1.030 37.246 8.058 1.00 0.00 ATOM 547 CD2 TRP 36 0.396 37.665 9.242 1.00 0.00 ATOM 548 C TRP 36 -0.618 39.993 7.080 1.00 0.00 ATOM 549 O TRP 36 0.182 40.143 6.159 1.00 0.00 ATOM 550 N ILE 37 -1.587 39.095 7.071 1.00 0.00 ATOM 552 CA ILE 37 -1.824 38.134 6.022 1.00 0.00 ATOM 554 CB ILE 37 -2.979 37.220 6.407 1.00 0.00 ATOM 556 CG2 ILE 37 -3.376 36.368 5.251 1.00 0.00 ATOM 560 CG1 ILE 37 -2.520 36.387 7.541 1.00 0.00 ATOM 563 CD1 ILE 37 -3.546 35.648 8.230 1.00 0.00 ATOM 567 C ILE 37 -2.085 38.815 4.699 1.00 0.00 ATOM 568 O ILE 37 -1.634 38.337 3.661 1.00 0.00 ATOM 569 N SER 38 -2.844 39.911 4.700 1.00 0.00 ATOM 571 CA SER 38 -3.123 40.569 3.434 1.00 0.00 ATOM 573 CB SER 38 -4.091 41.720 3.639 1.00 0.00 ATOM 576 OG SER 38 -5.355 41.258 4.041 1.00 0.00 ATOM 578 C SER 38 -1.828 41.083 2.809 1.00 0.00 ATOM 579 O SER 38 -1.613 40.943 1.597 1.00 0.00 ATOM 580 N SER 39 -0.950 41.659 3.644 1.00 0.00 ATOM 582 CA SER 39 0.325 42.189 3.172 1.00 0.00 ATOM 584 CB SER 39 0.973 43.048 4.245 1.00 0.00 ATOM 587 OG SER 39 0.224 44.208 4.479 1.00 0.00 ATOM 589 C SER 39 1.266 41.060 2.768 1.00 0.00 ATOM 590 O SER 39 1.907 41.124 1.712 1.00 0.00 ATOM 591 N PHE 40 1.305 40.006 3.586 1.00 0.00 ATOM 593 CA PHE 40 2.145 38.858 3.312 1.00 0.00 ATOM 595 CB PHE 40 2.041 37.811 4.423 1.00 0.00 ATOM 598 CG PHE 40 2.769 36.557 4.101 1.00 0.00 ATOM 599 CD1 PHE 40 4.149 36.495 4.177 1.00 0.00 ATOM 601 CE1 PHE 40 4.823 35.329 3.856 1.00 0.00 ATOM 603 CZ PHE 40 4.111 34.208 3.465 1.00 0.00 ATOM 605 CE2 PHE 40 2.728 34.257 3.400 1.00 0.00 ATOM 607 CD2 PHE 40 2.067 35.424 3.715 1.00 0.00 ATOM 609 C PHE 40 1.805 38.254 1.975 1.00 0.00 ATOM 610 O PHE 40 2.687 38.044 1.137 1.00 0.00 ATOM 611 N ILE 41 0.521 38.008 1.743 1.00 0.00 ATOM 613 CA ILE 41 0.105 37.465 0.463 1.00 0.00 ATOM 615 CB ILE 41 -1.396 37.163 0.464 1.00 0.00 ATOM 617 CG2 ILE 41 -1.895 36.855 -0.930 1.00 0.00 ATOM 621 CG1 ILE 41 -1.694 36.015 1.410 1.00 0.00 ATOM 624 CD1 ILE 41 -3.160 35.851 1.666 1.00 0.00 ATOM 628 C ILE 41 0.444 38.424 -0.665 1.00 0.00 ATOM 629 O ILE 41 1.093 38.033 -1.633 1.00 0.00 ATOM 630 N GLY 42 0.133 39.709 -0.508 1.00 0.00 ATOM 632 CA GLY 42 0.442 40.660 -1.569 1.00 0.00 ATOM 635 C GLY 42 1.925 40.640 -1.967 1.00 0.00 ATOM 636 O GLY 42 2.257 40.855 -3.139 1.00 0.00 ATOM 637 N ARG 43 2.815 40.391 -1.000 1.00 0.00 ATOM 639 CA ARG 43 4.247 40.329 -1.265 1.00 0.00 ATOM 641 CB ARG 43 5.010 40.795 -0.036 1.00 0.00 ATOM 644 CG ARG 43 4.840 42.276 0.282 1.00 0.00 ATOM 647 CD ARG 43 5.601 42.691 1.491 1.00 0.00 ATOM 650 NE ARG 43 5.435 44.115 1.766 1.00 0.00 ATOM 652 CZ ARG 43 6.084 44.799 2.732 1.00 0.00 ATOM 653 NH1 ARG 43 6.951 44.189 3.507 1.00 0.00 ATOM 656 NH2 ARG 43 5.849 46.091 2.893 1.00 0.00 ATOM 659 C ARG 43 4.787 38.946 -1.690 1.00 0.00 ATOM 660 O ARG 43 5.751 38.882 -2.461 1.00 0.00 ATOM 661 N SER 44 4.200 37.845 -1.194 1.00 0.00 ATOM 663 CA SER 44 4.750 36.506 -1.449 1.00 0.00 ATOM 665 CB SER 44 5.058 35.847 -0.123 1.00 0.00 ATOM 668 OG SER 44 3.888 35.664 0.609 1.00 0.00 ATOM 670 C SER 44 3.891 35.529 -2.269 1.00 0.00 ATOM 671 O SER 44 4.405 34.511 -2.739 1.00 0.00 ATOM 672 N LYS 45 2.596 35.784 -2.401 1.00 0.00 ATOM 674 CA LYS 45 1.713 34.861 -3.104 1.00 0.00 ATOM 676 CB LYS 45 0.966 33.998 -2.086 1.00 0.00 ATOM 679 CG LYS 45 0.038 32.968 -2.687 1.00 0.00 ATOM 682 CD LYS 45 -0.619 32.117 -1.606 1.00 0.00 ATOM 685 CE LYS 45 -1.572 31.096 -2.219 1.00 0.00 ATOM 688 NZ LYS 45 -2.212 30.236 -1.181 1.00 0.00 ATOM 692 C LYS 45 0.719 35.600 -3.987 1.00 0.00 ATOM 693 O LYS 45 -0.116 36.359 -3.505 1.00 0.00 TER END