####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS224_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS224_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 12 - 32 4.87 11.26 LONGEST_CONTINUOUS_SEGMENT: 21 13 - 33 4.87 11.36 LONGEST_CONTINUOUS_SEGMENT: 21 16 - 36 4.91 13.62 LCS_AVERAGE: 44.47 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 8 - 17 1.99 21.23 LCS_AVERAGE: 17.36 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 9 - 17 0.87 21.97 LCS_AVERAGE: 12.19 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 0 3 17 0 0 3 3 3 3 3 4 7 8 9 13 13 15 17 19 20 23 23 31 LCS_GDT V 3 V 3 0 4 19 0 1 3 3 4 5 5 6 8 8 11 15 19 20 21 26 29 30 30 34 LCS_GDT Q 4 Q 4 3 4 20 1 3 3 4 4 5 6 7 8 8 11 15 19 20 23 28 29 30 32 34 LCS_GDT G 5 G 5 3 6 20 0 3 4 5 5 6 8 10 13 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT P 6 P 6 3 6 20 2 3 3 4 5 8 10 12 13 15 19 22 24 26 29 31 31 31 32 34 LCS_GDT W 7 W 7 3 6 20 3 3 4 5 5 8 10 12 13 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT V 8 V 8 3 10 20 3 3 4 5 5 6 9 12 13 15 19 22 24 25 29 31 31 31 32 34 LCS_GDT G 9 G 9 9 10 20 5 8 8 9 9 9 9 10 10 13 14 15 17 20 26 28 29 31 32 34 LCS_GDT S 10 S 10 9 10 20 5 8 8 9 9 9 10 12 13 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT S 11 S 11 9 10 20 5 8 8 9 9 9 10 12 13 15 19 22 24 26 29 31 31 31 32 34 LCS_GDT Y 12 Y 12 9 10 21 5 8 8 9 9 9 10 12 13 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT V 13 V 13 9 10 21 5 8 8 9 9 9 9 12 13 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT A 14 A 14 9 10 21 5 8 8 9 9 9 10 12 13 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT E 15 E 15 9 10 21 5 8 8 9 9 9 10 12 13 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT T 16 T 16 9 10 21 3 8 8 9 9 9 9 12 13 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT G 17 G 17 9 10 21 3 4 8 9 9 9 9 12 14 16 19 21 24 26 29 31 31 31 32 34 LCS_GDT Q 18 Q 18 3 4 21 3 3 4 5 5 8 10 12 14 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT N 19 N 19 3 4 21 3 3 3 4 7 10 10 12 12 15 17 18 22 25 28 31 31 31 32 34 LCS_GDT W 20 W 20 8 9 21 3 5 8 8 8 9 10 12 13 15 17 18 21 23 29 31 31 31 32 34 LCS_GDT A 21 A 21 8 9 21 3 5 8 8 8 10 10 12 13 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT S 22 S 22 8 9 21 3 5 8 8 8 10 10 12 13 15 17 21 24 25 29 31 31 31 32 34 LCS_GDT L 23 L 23 8 9 21 3 5 8 8 8 10 10 12 13 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT A 24 A 24 8 9 21 3 4 8 8 8 10 10 12 14 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT A 25 A 25 8 9 21 3 5 8 8 8 10 10 12 13 15 19 22 24 26 29 31 31 31 32 34 LCS_GDT N 26 N 26 8 9 21 3 5 8 8 8 10 10 12 14 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT E 27 E 27 8 9 21 3 4 8 8 8 10 10 11 14 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT L 28 L 28 3 9 21 3 4 5 5 8 10 10 12 14 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT R 29 R 29 3 9 21 1 4 5 5 8 10 10 12 14 16 18 22 24 26 29 31 31 31 32 34 LCS_GDT V 30 V 30 3 6 21 1 4 4 5 6 8 10 12 14 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT T 31 T 31 4 6 21 2 4 4 5 6 8 9 12 14 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT E 32 E 32 4 6 21 2 3 4 5 5 8 9 12 14 16 19 22 24 26 29 31 31 31 32 34 LCS_GDT R 33 R 33 4 6 21 0 3 4 5 5 7 8 11 14 16 19 21 24 26 29 31 31 31 32 34 LCS_GDT P 34 P 34 4 6 21 2 3 4 5 6 7 8 11 14 16 19 21 24 26 29 31 31 31 32 34 LCS_GDT F 35 F 35 3 8 21 3 3 4 7 7 8 9 11 14 16 19 21 24 26 29 31 31 31 32 34 LCS_GDT W 36 W 36 4 8 21 3 3 4 5 7 8 9 10 14 16 19 21 23 25 27 31 31 31 32 34 LCS_GDT I 37 I 37 4 8 16 3 4 4 7 7 8 9 10 10 12 13 15 18 21 24 25 27 28 29 30 LCS_GDT S 38 S 38 5 8 16 3 4 5 7 7 8 9 10 10 12 13 14 17 19 24 24 27 28 29 29 LCS_GDT S 39 S 39 5 8 16 3 4 5 7 7 8 9 10 10 12 13 14 17 20 24 25 27 28 29 30 LCS_GDT F 40 F 40 5 8 16 3 4 5 7 7 8 9 10 10 12 13 14 17 18 24 24 27 28 29 29 LCS_GDT I 41 I 41 5 8 16 3 3 5 7 7 8 9 10 10 12 13 14 15 16 20 21 25 27 29 29 LCS_GDT G 42 G 42 5 8 15 3 3 5 7 7 7 8 10 10 12 13 14 15 16 20 21 24 26 29 29 LCS_GDT R 43 R 43 3 5 15 3 3 4 5 6 8 9 9 9 12 13 14 14 14 15 15 17 20 22 24 LCS_GDT S 44 S 44 3 5 15 0 3 4 5 6 8 9 9 9 12 13 14 14 14 15 15 15 16 19 20 LCS_GDT K 45 K 45 3 5 15 2 3 3 4 5 6 9 9 9 10 13 14 14 14 14 15 15 16 16 16 LCS_AVERAGE LCS_A: 24.67 ( 12.19 17.36 44.47 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 8 8 9 9 10 10 12 14 16 19 22 24 26 29 31 31 31 32 34 GDT PERCENT_AT 11.36 18.18 18.18 20.45 20.45 22.73 22.73 27.27 31.82 36.36 43.18 50.00 54.55 59.09 65.91 70.45 70.45 70.45 72.73 77.27 GDT RMS_LOCAL 0.29 0.54 0.54 0.87 0.87 2.08 2.06 2.92 3.57 3.71 4.17 4.57 4.80 5.14 5.48 5.71 5.71 5.71 5.89 6.35 GDT RMS_ALL_AT 22.12 22.57 22.57 21.97 21.97 13.66 15.43 18.18 13.33 13.13 12.55 12.54 12.40 12.78 12.80 12.63 12.63 12.63 12.74 12.50 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 14.647 0 0.194 0.208 15.632 0.000 0.000 - LGA V 3 V 3 12.025 0 0.663 1.023 14.544 0.000 0.000 9.834 LGA Q 4 Q 4 12.166 0 0.320 1.081 16.944 0.000 0.000 16.944 LGA G 5 G 5 6.317 0 0.750 0.750 8.679 0.000 0.000 - LGA P 6 P 6 1.949 0 0.353 0.599 3.672 29.545 31.948 1.792 LGA W 7 W 7 3.487 0 0.389 0.571 11.977 36.818 10.519 11.929 LGA V 8 V 8 4.163 0 0.178 1.328 7.166 10.909 6.234 7.166 LGA G 9 G 9 7.274 0 0.411 0.411 7.274 0.000 0.000 - LGA S 10 S 10 2.912 0 0.055 0.544 4.524 44.091 42.121 2.158 LGA S 11 S 11 2.395 0 0.165 0.661 4.342 51.818 36.364 4.342 LGA Y 12 Y 12 2.412 0 0.209 1.346 14.201 31.818 11.061 14.201 LGA V 13 V 13 3.973 0 0.067 1.197 7.372 11.364 8.052 7.372 LGA A 14 A 14 3.077 0 0.051 0.067 4.784 14.545 17.091 - LGA E 15 E 15 3.478 0 0.130 1.260 5.880 15.455 28.283 2.301 LGA T 16 T 16 5.825 0 0.258 1.264 6.897 1.364 0.779 5.836 LGA G 17 G 17 5.787 0 0.253 0.253 5.787 7.273 7.273 - LGA Q 18 Q 18 1.156 0 0.689 1.310 8.108 34.091 16.364 8.108 LGA N 19 N 19 6.463 0 0.207 0.634 10.846 1.364 0.682 10.846 LGA W 20 W 20 2.507 0 0.576 0.755 10.878 23.182 7.922 10.401 LGA A 21 A 21 7.333 0 0.124 0.136 9.624 0.000 0.000 - LGA S 22 S 22 8.795 0 0.164 0.625 10.432 0.000 0.000 10.432 LGA L 23 L 23 2.032 0 0.166 0.162 6.016 12.273 17.955 5.875 LGA A 24 A 24 7.684 0 0.046 0.050 12.022 0.000 0.000 - LGA A 25 A 25 12.643 0 0.091 0.132 14.444 0.000 0.000 - LGA N 26 N 26 10.178 0 0.645 1.128 10.294 0.000 0.000 10.058 LGA E 27 E 27 12.134 0 0.497 1.379 16.066 0.000 0.000 10.269 LGA L 28 L 28 14.766 0 0.104 0.338 18.143 0.000 0.000 12.656 LGA R 29 R 29 17.793 0 1.114 1.643 23.466 0.000 0.000 23.466 LGA V 30 V 30 16.950 0 0.589 1.140 19.441 0.000 0.000 16.162 LGA T 31 T 31 18.002 0 0.852 1.382 19.087 0.000 0.000 19.087 LGA E 32 E 32 19.210 0 0.590 1.092 25.286 0.000 0.000 25.286 LGA R 33 R 33 17.005 0 0.380 1.328 18.026 0.000 0.000 13.664 LGA P 34 P 34 17.957 0 0.487 0.793 20.636 0.000 0.000 18.828 LGA F 35 F 35 17.737 0 0.523 1.339 18.434 0.000 0.000 17.150 LGA W 36 W 36 20.473 0 0.435 0.824 23.437 0.000 0.000 17.996 LGA I 37 I 37 23.624 0 0.232 1.094 27.063 0.000 0.000 23.090 LGA S 38 S 38 29.889 0 0.205 0.675 31.855 0.000 0.000 31.855 LGA S 39 S 39 28.161 0 0.188 0.733 29.065 0.000 0.000 26.033 LGA F 40 F 40 26.425 0 0.144 1.211 29.789 0.000 0.000 17.543 LGA I 41 I 41 33.064 0 0.223 1.368 35.827 0.000 0.000 35.553 LGA G 42 G 42 36.369 0 0.399 0.399 39.568 0.000 0.000 - LGA R 43 R 43 38.907 0 0.395 1.056 39.976 0.000 0.000 39.769 LGA S 44 S 44 40.707 0 0.589 0.608 41.594 0.000 0.000 41.315 LGA K 45 K 45 41.653 0 0.613 0.832 45.291 0.000 0.000 43.070 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.939 10.844 12.104 7.407 5.515 3.792 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.92 34.091 28.402 0.397 LGA_LOCAL RMSD: 2.921 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 18.177 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.939 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.921527 * X + 0.352435 * Y + 0.163027 * Z + 79.847214 Y_new = -0.268575 * X + -0.275258 * Y + -0.923093 * Z + 111.930824 Z_new = -0.280456 * X + -0.894440 * Y + 0.348312 * Z + 54.658234 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.858002 0.284269 -1.199444 [DEG: -163.7515 16.2874 -68.7231 ] ZXZ: 0.174807 1.215026 -2.837748 [DEG: 10.0157 69.6159 -162.5910 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS224_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS224_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.92 28.402 10.94 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS224_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 REFINED PARENT N/A ATOM 9 N ALA 2 9.799 40.076 -1.032 1.00 93.94 ATOM 10 CA ALA 2 9.083 38.774 -0.947 1.00 93.94 ATOM 11 C ALA 2 7.630 39.200 -0.902 1.00 93.94 ATOM 12 O ALA 2 7.029 39.736 0.028 1.00 93.94 ATOM 13 CB ALA 2 9.502 37.871 0.182 1.00 93.94 ATOM 14 N VAL 3 6.910 38.971 -1.989 1.00 97.83 ATOM 15 CA VAL 3 6.081 41.176 -0.408 1.00 97.83 ATOM 16 C VAL 3 5.455 40.744 -1.719 1.00 97.83 ATOM 17 O VAL 3 4.266 40.523 -1.944 1.00 97.83 ATOM 18 CB VAL 3 6.022 42.656 -0.062 1.00 97.83 ATOM 19 CG1 VAL 3 6.846 42.723 1.236 1.00 97.83 ATOM 20 CG2 VAL 3 6.783 43.271 -1.127 1.00 97.83 ATOM 21 N GLN 4 6.295 40.585 -2.754 1.00 97.98 ATOM 22 CA GLN 4 6.836 40.169 -4.077 1.00 97.98 ATOM 23 C GLN 4 7.150 39.038 -3.116 1.00 97.98 ATOM 24 O GLN 4 8.243 38.740 -2.636 1.00 97.98 ATOM 25 CB GLN 4 8.143 39.978 -4.793 1.00 97.98 ATOM 26 CG GLN 4 8.100 41.051 -5.882 1.00 97.98 ATOM 27 CD GLN 4 9.425 40.858 -6.607 1.00 97.98 ATOM 28 OE1 GLN 4 9.401 41.717 -7.487 1.00 97.98 ATOM 29 NE2 GLN 4 10.492 40.024 -6.483 1.00 97.98 ATOM 30 N GLY 5 6.120 38.271 -2.746 1.00 99.12 ATOM 31 CA GLY 5 5.635 37.637 -1.388 1.00 99.12 ATOM 32 C GLY 5 6.118 36.994 -0.093 1.00 99.12 ATOM 33 O GLY 5 5.454 36.341 0.709 1.00 99.12 ATOM 34 N PRO 6 7.401 37.140 0.232 1.00 91.98 ATOM 35 CA PRO 6 7.812 36.442 1.597 1.00 91.98 ATOM 36 C PRO 6 7.558 35.826 2.989 1.00 91.98 ATOM 37 O PRO 6 8.363 35.696 3.909 1.00 91.98 ATOM 38 CB PRO 6 8.825 37.342 2.163 1.00 91.98 ATOM 39 CG PRO 6 9.260 38.001 0.897 1.00 91.98 ATOM 40 CD PRO 6 8.409 38.054 -0.283 1.00 91.98 ATOM 41 N TRP 7 6.335 35.367 3.273 1.00 93.35 ATOM 42 CA TRP 7 5.171 35.612 4.320 1.00 93.35 ATOM 43 C TRP 7 5.891 34.285 4.537 1.00 93.35 ATOM 44 O TRP 7 5.618 33.436 5.384 1.00 93.35 ATOM 45 CB TRP 7 3.668 35.561 4.265 1.00 93.35 ATOM 46 CG TRP 7 2.956 36.875 4.050 1.00 93.35 ATOM 47 CD1 TRP 7 1.737 37.166 3.184 1.00 93.35 ATOM 48 CD2 TRP 7 3.408 38.001 4.683 1.00 93.35 ATOM 49 NE1 TRP 7 1.599 38.552 3.429 1.00 93.35 ATOM 50 CE2 TRP 7 2.411 38.707 4.094 1.00 93.35 ATOM 51 CE3 TRP 7 4.498 37.950 5.510 1.00 93.35 ATOM 52 CZ2 TRP 7 2.862 39.833 4.728 1.00 93.35 ATOM 53 CZ3 TRP 7 4.949 39.076 6.144 1.00 93.35 ATOM 54 CH2 TRP 7 3.952 39.783 5.554 1.00 93.35 ATOM 55 N VAL 8 6.921 33.927 3.788 1.00 97.68 ATOM 56 CA VAL 8 7.338 32.928 2.540 1.00 97.68 ATOM 57 C VAL 8 8.284 31.975 3.235 1.00 97.68 ATOM 58 O VAL 8 8.266 30.745 3.253 1.00 97.68 ATOM 59 CB VAL 8 7.841 32.918 1.105 1.00 97.68 ATOM 60 CG1 VAL 8 6.817 34.031 0.517 1.00 97.68 ATOM 61 CG2 VAL 8 9.267 33.439 1.375 1.00 97.68 ATOM 62 N GLY 9 9.251 32.576 3.908 1.00 92.78 ATOM 63 CA GLY 9 10.020 34.161 5.061 1.00 92.78 ATOM 64 C GLY 9 9.401 33.160 6.032 1.00 92.78 ATOM 65 O GLY 9 9.306 33.254 7.255 1.00 92.78 ATOM 66 N SER 10 8.899 32.047 5.507 1.00 95.54 ATOM 67 CA SER 10 7.994 30.884 5.534 1.00 95.54 ATOM 68 C SER 10 7.376 30.721 6.917 1.00 95.54 ATOM 69 O SER 10 6.335 30.139 7.219 1.00 95.54 ATOM 70 CB SER 10 8.448 29.534 5.059 1.00 95.54 ATOM 71 OG SER 10 9.038 29.669 3.747 1.00 95.54 ATOM 72 N SER 11 8.000 31.253 7.940 1.00 94.77 ATOM 73 CA SER 11 8.135 31.208 9.399 1.00 94.77 ATOM 74 C SER 11 6.968 32.155 9.602 1.00 94.77 ATOM 75 O SER 11 6.249 32.213 10.598 1.00 94.77 ATOM 76 CB SER 11 9.343 31.527 10.232 1.00 94.77 ATOM 77 OG SER 11 10.436 30.641 10.042 1.00 94.77 ATOM 78 N TYR 12 6.637 33.035 8.650 1.00 96.29 ATOM 79 CA TYR 12 5.812 34.208 8.580 1.00 96.29 ATOM 80 C TYR 12 4.588 33.418 8.127 1.00 96.29 ATOM 81 O TYR 12 3.443 33.446 8.576 1.00 96.29 ATOM 82 CB TYR 12 6.187 35.413 7.774 1.00 96.29 ATOM 83 CG TYR 12 7.382 36.185 8.216 1.00 96.29 ATOM 84 CD1 TYR 12 8.235 36.688 7.277 1.00 96.29 ATOM 85 CD2 TYR 12 7.597 36.373 9.550 1.00 96.29 ATOM 86 CE1 TYR 12 9.304 37.378 7.673 1.00 96.29 ATOM 87 CE2 TYR 12 8.666 37.063 9.947 1.00 96.29 ATOM 88 CZ TYR 12 9.519 37.566 9.008 1.00 96.29 ATOM 89 OH TYR 12 10.638 38.289 9.422 1.00 96.29 ATOM 90 N VAL 13 4.767 32.593 7.124 1.00 93.65 ATOM 91 CA VAL 13 3.611 31.675 6.627 1.00 93.65 ATOM 92 C VAL 13 3.364 30.634 7.749 1.00 93.65 ATOM 93 O VAL 13 2.302 30.307 8.276 1.00 93.65 ATOM 94 CB VAL 13 3.863 31.163 5.218 1.00 93.65 ATOM 95 CG1 VAL 13 4.100 32.251 4.158 1.00 93.65 ATOM 96 CG2 VAL 13 4.994 30.207 5.061 1.00 93.65 ATOM 97 N ALA 14 4.467 30.009 8.201 1.00 95.13 ATOM 98 CA ALA 14 4.296 28.876 9.151 1.00 95.13 ATOM 99 C ALA 14 3.889 29.421 10.503 1.00 95.13 ATOM 100 O ALA 14 2.988 29.022 11.239 1.00 95.13 ATOM 101 CB ALA 14 5.632 28.197 9.291 1.00 95.13 ATOM 102 N GLU 15 4.582 30.455 10.957 1.00 99.52 ATOM 103 CA GLU 15 3.671 30.888 12.411 1.00 99.52 ATOM 104 C GLU 15 2.324 31.479 12.025 1.00 99.52 ATOM 105 O GLU 15 1.271 31.378 12.653 1.00 99.52 ATOM 106 CB GLU 15 4.642 31.814 13.097 1.00 99.52 ATOM 107 CG GLU 15 5.997 31.219 13.486 1.00 99.52 ATOM 108 CD GLU 15 6.979 32.154 14.179 1.00 99.52 ATOM 109 OE1 GLU 15 8.120 31.669 14.512 1.00 99.52 ATOM 110 OE2 GLU 15 6.889 33.372 14.509 1.00 99.52 ATOM 111 N THR 16 2.247 32.191 10.879 1.00 99.16 ATOM 112 CA THR 16 1.104 32.781 10.197 1.00 99.16 ATOM 113 C THR 16 0.180 31.592 10.224 1.00 99.16 ATOM 114 O THR 16 -0.978 31.546 10.638 1.00 99.16 ATOM 115 CB THR 16 1.376 33.551 8.922 1.00 99.16 ATOM 116 OG1 THR 16 2.248 34.672 8.896 1.00 99.16 ATOM 117 CG2 THR 16 1.851 32.911 7.746 1.00 99.16 ATOM 118 N GLY 17 0.677 30.459 9.742 1.00 96.36 ATOM 119 CA GLY 17 -0.206 29.218 9.682 1.00 96.36 ATOM 120 C GLY 17 -0.273 28.549 11.030 1.00 96.36 ATOM 121 O GLY 17 -1.283 28.113 11.582 1.00 96.36 ATOM 122 N GLN 18 0.851 28.394 11.727 1.00 97.17 ATOM 123 CA GLN 18 0.270 27.738 13.240 1.00 97.17 ATOM 124 C GLN 18 -0.430 28.628 14.262 1.00 97.17 ATOM 125 O GLN 18 -0.846 28.308 15.374 1.00 97.17 ATOM 126 CB GLN 18 1.582 27.323 13.842 1.00 97.17 ATOM 127 CG GLN 18 2.384 26.286 13.053 1.00 97.17 ATOM 128 CD GLN 18 3.713 25.866 13.663 1.00 97.17 ATOM 129 OE1 GLN 18 4.358 25.139 12.908 1.00 97.17 ATOM 130 NE2 GLN 18 4.423 26.101 14.913 1.00 97.17 ATOM 131 N ASN 19 -0.625 29.907 13.933 1.00 91.42 ATOM 132 CA ASN 19 -0.988 31.138 14.628 1.00 91.42 ATOM 133 C ASN 19 -2.282 31.239 13.837 1.00 91.42 ATOM 134 O ASN 19 -3.395 31.569 14.249 1.00 91.42 ATOM 135 CB ASN 19 -0.125 32.336 14.786 1.00 91.42 ATOM 136 CG ASN 19 1.127 31.841 15.498 1.00 91.42 ATOM 137 OD1 ASN 19 1.842 32.833 15.629 1.00 91.42 ATOM 138 ND2 ASN 19 1.490 30.676 16.096 1.00 91.42 ATOM 139 N TRP 20 -2.225 30.940 12.545 1.00 96.07 ATOM 140 CA TRP 20 -3.527 30.879 11.704 1.00 96.07 ATOM 141 C TRP 20 -4.059 29.492 12.037 1.00 96.07 ATOM 142 O TRP 20 -5.232 29.129 12.113 1.00 96.07 ATOM 143 CB TRP 20 -3.238 31.118 10.247 1.00 96.07 ATOM 144 CG TRP 20 -2.711 32.494 9.918 1.00 96.07 ATOM 145 CD1 TRP 20 -1.767 32.906 8.795 1.00 96.07 ATOM 146 CD2 TRP 20 -3.086 33.564 10.684 1.00 96.07 ATOM 147 NE1 TRP 20 -1.688 34.296 9.053 1.00 96.07 ATOM 148 CE2 TRP 20 -2.323 34.367 9.900 1.00 96.07 ATOM 149 CE3 TRP 20 -3.933 33.402 11.746 1.00 96.07 ATOM 150 CZ2 TRP 20 -2.699 35.437 10.666 1.00 96.07 ATOM 151 CZ3 TRP 20 -4.309 34.472 12.513 1.00 96.07 ATOM 152 CH2 TRP 20 -3.547 35.274 11.729 1.00 96.07 ATOM 153 N ALA 21 -3.159 28.551 12.275 1.00 90.16 ATOM 154 CA ALA 21 -3.728 27.106 12.596 1.00 90.16 ATOM 155 C ALA 21 -4.188 27.059 14.048 1.00 90.16 ATOM 156 O ALA 21 -5.288 26.715 14.481 1.00 90.16 ATOM 157 CB ALA 21 -2.579 26.155 12.391 1.00 90.16 ATOM 158 N SER 22 -3.304 27.433 14.971 1.00 92.43 ATOM 159 CA SER 22 -4.324 27.334 16.427 1.00 92.43 ATOM 160 C SER 22 -5.327 28.468 16.441 1.00 92.43 ATOM 161 O SER 22 -6.426 28.496 16.994 1.00 92.43 ATOM 162 CB SER 22 -3.258 27.345 17.484 1.00 92.43 ATOM 163 OG SER 22 -2.317 26.282 17.470 1.00 92.43 ATOM 164 N LEU 23 -4.990 29.565 15.782 1.00 91.37 ATOM 165 CA LEU 23 -5.828 30.821 15.627 1.00 91.37 ATOM 166 C LEU 23 -6.851 30.114 14.734 1.00 91.37 ATOM 167 O LEU 23 -8.070 30.284 14.714 1.00 91.37 ATOM 168 CB LEU 23 -5.141 32.048 15.081 1.00 91.37 ATOM 169 CG LEU 23 -4.087 32.440 16.130 1.00 91.37 ATOM 170 CD1 LEU 23 -3.387 33.691 15.573 1.00 91.37 ATOM 171 CD2 LEU 23 -4.541 32.885 17.531 1.00 91.37 ATOM 172 N ALA 24 -6.408 29.204 13.864 1.00 98.04 ATOM 173 CA ALA 24 -7.172 28.307 12.992 1.00 98.04 ATOM 174 C ALA 24 -7.975 27.301 13.813 1.00 98.04 ATOM 175 O ALA 24 -9.130 26.925 13.628 1.00 98.04 ATOM 176 CB ALA 24 -6.338 27.673 11.912 1.00 98.04 ATOM 177 N ALA 25 -7.339 26.764 14.865 1.00 91.57 ATOM 178 CA ALA 25 -7.990 25.651 15.703 1.00 91.57 ATOM 179 C ALA 25 -8.641 26.091 17.021 1.00 91.57 ATOM 180 O ALA 25 -9.712 25.710 17.492 1.00 91.57 ATOM 181 CB ALA 25 -7.393 24.283 15.728 1.00 91.57 ATOM 182 N ASN 26 -8.002 26.988 17.774 1.00 94.01 ATOM 183 CA ASN 26 -8.466 27.285 19.103 1.00 94.01 ATOM 184 C ASN 26 -9.252 28.474 18.524 1.00 94.01 ATOM 185 O ASN 26 -8.805 29.542 18.111 1.00 94.01 ATOM 186 CB ASN 26 -7.295 27.775 19.873 1.00 94.01 ATOM 187 CG ASN 26 -6.516 26.600 20.445 1.00 94.01 ATOM 188 OD1 ASN 26 -5.547 27.006 21.084 1.00 94.01 ATOM 189 ND2 ASN 26 -6.680 25.250 20.390 1.00 94.01 ATOM 190 N GLU 27 -10.600 28.321 18.463 1.00 91.30 ATOM 191 CA GLU 27 -10.977 29.882 17.882 1.00 91.30 ATOM 192 C GLU 27 -11.187 29.575 16.404 1.00 91.30 ATOM 193 O GLU 27 -12.021 28.818 15.909 1.00 91.30 ATOM 194 CB GLU 27 -10.947 31.316 18.343 1.00 91.30 ATOM 195 CG GLU 27 -10.765 31.746 19.756 1.00 91.30 ATOM 196 CD GLU 27 -10.735 33.194 20.221 1.00 91.30 ATOM 197 OE1 GLU 27 -10.562 33.450 21.443 1.00 91.30 ATOM 198 OE2 GLU 27 -10.863 34.253 19.550 1.00 91.30 ATOM 199 N LEU 28 -10.410 30.160 15.510 1.00 91.09 ATOM 200 CA LEU 28 -10.301 29.908 14.060 1.00 91.09 ATOM 201 C LEU 28 -11.452 29.388 13.216 1.00 91.09 ATOM 202 O LEU 28 -11.455 29.163 12.008 1.00 91.09 ATOM 203 CB LEU 28 -9.309 29.140 13.221 1.00 91.09 ATOM 204 CG LEU 28 -7.966 29.495 13.881 1.00 91.09 ATOM 205 CD1 LEU 28 -6.956 28.711 13.026 1.00 91.09 ATOM 206 CD2 LEU 28 -7.938 31.030 13.798 1.00 91.09 ATOM 207 N ARG 29 -12.601 29.140 13.840 1.00 99.99 ATOM 208 CA ARG 29 -13.306 28.089 15.710 1.00 99.99 ATOM 209 C ARG 29 -14.032 28.430 14.446 1.00 99.99 ATOM 210 O ARG 29 -13.631 28.293 13.292 1.00 99.99 ATOM 211 CB ARG 29 -14.125 28.442 16.918 1.00 99.99 ATOM 212 CG ARG 29 -13.169 28.186 18.086 1.00 99.99 ATOM 213 CD ARG 29 -14.003 28.546 19.317 1.00 99.99 ATOM 214 NE ARG 29 -13.280 28.207 20.575 1.00 99.99 ATOM 215 CZ ARG 29 -14.024 28.527 21.717 1.00 99.99 ATOM 216 NH1 ARG 29 -13.802 28.027 22.967 1.00 99.99 ATOM 217 NH2 ARG 29 -15.358 28.819 21.757 1.00 99.99 ATOM 218 N VAL 30 -15.253 28.940 14.612 1.00 92.18 ATOM 219 CA VAL 30 -13.587 30.155 12.436 1.00 92.18 ATOM 220 C VAL 30 -15.050 29.840 12.120 1.00 92.18 ATOM 221 O VAL 30 -15.518 29.390 11.075 1.00 92.18 ATOM 222 CB VAL 30 -13.581 29.758 10.969 1.00 92.18 ATOM 223 CG1 VAL 30 -12.049 29.760 10.824 1.00 92.18 ATOM 224 CG2 VAL 30 -13.894 28.254 10.904 1.00 92.18 ATOM 225 N THR 31 -15.942 30.074 13.080 1.00 95.13 ATOM 226 CA THR 31 -16.627 29.295 14.692 1.00 95.13 ATOM 227 C THR 31 -17.209 29.093 13.295 1.00 95.13 ATOM 228 O THR 31 -16.776 28.401 12.373 1.00 95.13 ATOM 229 CB THR 31 -17.481 30.152 15.602 1.00 95.13 ATOM 230 OG1 THR 31 -16.902 30.331 16.759 1.00 95.13 ATOM 231 CG2 THR 31 -17.761 31.420 14.926 1.00 95.13 ATOM 232 N GLU 32 -18.333 29.756 13.048 1.00 98.39 ATOM 233 CA GLU 32 -16.874 29.521 10.938 1.00 98.39 ATOM 234 C GLU 32 -18.279 30.025 10.602 1.00 98.39 ATOM 235 O GLU 32 -18.722 30.330 9.496 1.00 98.39 ATOM 236 CB GLU 32 -16.954 28.408 9.927 1.00 98.39 ATOM 237 CG GLU 32 -15.698 27.583 10.221 1.00 98.39 ATOM 238 CD GLU 32 -15.778 26.459 9.200 1.00 98.39 ATOM 239 OE1 GLU 32 -14.664 25.882 9.312 1.00 98.39 ATOM 240 OE2 GLU 32 -16.589 25.997 8.352 1.00 98.39 ATOM 241 N ARG 33 -19.141 30.155 11.625 1.00 96.13 ATOM 242 CA ARG 33 -20.231 30.657 12.524 1.00 96.13 ATOM 243 C ARG 33 -21.032 31.516 11.573 1.00 96.13 ATOM 244 O ARG 33 -21.461 32.652 11.774 1.00 96.13 ATOM 245 CB ARG 33 -20.353 31.841 13.440 1.00 96.13 ATOM 246 CG ARG 33 -19.586 31.325 14.659 1.00 96.13 ATOM 247 CD ARG 33 -19.709 32.532 15.591 1.00 96.13 ATOM 248 NE ARG 33 -18.936 31.874 16.682 1.00 96.13 ATOM 249 CZ ARG 33 -18.904 32.800 17.684 1.00 96.13 ATOM 250 NH1 ARG 33 -18.522 32.138 18.817 1.00 96.13 ATOM 251 NH2 ARG 33 -19.649 33.923 17.896 1.00 96.13 ATOM 252 N PRO 34 -21.310 30.985 10.376 1.00 92.96 ATOM 253 CA PRO 34 -22.072 31.405 9.253 1.00 92.96 ATOM 254 C PRO 34 -21.546 31.713 7.868 1.00 92.96 ATOM 255 O PRO 34 -21.715 31.041 6.851 1.00 92.96 ATOM 256 CB PRO 34 -23.576 31.467 9.165 1.00 92.96 ATOM 257 CG PRO 34 -23.743 31.080 10.709 1.00 92.96 ATOM 258 CD PRO 34 -22.382 30.776 11.403 1.00 92.96 ATOM 259 N PHE 35 -20.820 32.814 7.683 1.00 96.38 ATOM 260 CA PHE 35 -20.158 34.196 7.351 1.00 96.38 ATOM 261 C PHE 35 -19.344 32.990 6.929 1.00 96.38 ATOM 262 O PHE 35 -18.694 32.875 5.891 1.00 96.38 ATOM 263 CB PHE 35 -19.513 35.456 7.842 1.00 96.38 ATOM 264 CG PHE 35 -20.424 36.562 8.249 1.00 96.38 ATOM 265 CD1 PHE 35 -20.239 37.087 9.494 1.00 96.38 ATOM 266 CD2 PHE 35 -21.325 37.097 7.374 1.00 96.38 ATOM 267 CE1 PHE 35 -20.955 38.147 9.866 1.00 96.38 ATOM 268 CE2 PHE 35 -22.042 38.157 7.746 1.00 96.38 ATOM 269 CZ PHE 35 -21.856 38.682 8.991 1.00 96.38 ATOM 270 N TRP 36 -19.278 31.917 7.700 1.00 95.24 ATOM 271 CA TRP 36 -18.568 30.799 7.960 1.00 95.24 ATOM 272 C TRP 36 -19.433 29.706 7.357 1.00 95.24 ATOM 273 O TRP 36 -19.591 28.557 7.765 1.00 95.24 ATOM 274 CB TRP 36 -18.464 30.157 9.316 1.00 95.24 ATOM 275 CG TRP 36 -17.611 31.110 10.119 1.00 95.24 ATOM 276 CD1 TRP 36 -17.638 31.674 11.533 1.00 95.24 ATOM 277 CD2 TRP 36 -16.655 31.718 9.349 1.00 95.24 ATOM 278 NE1 TRP 36 -16.604 32.634 11.424 1.00 95.24 ATOM 279 CE2 TRP 36 -16.318 32.489 10.412 1.00 95.24 ATOM 280 CE3 TRP 36 -16.470 31.352 8.043 1.00 95.24 ATOM 281 CZ2 TRP 36 -15.362 33.096 9.643 1.00 95.24 ATOM 282 CZ3 TRP 36 -15.514 31.958 7.274 1.00 95.24 ATOM 283 CH2 TRP 36 -15.178 32.730 8.337 1.00 95.24 ATOM 284 N ILE 37 -20.114 29.948 6.283 1.00 94.94 ATOM 285 CA ILE 37 -20.940 28.744 5.783 1.00 94.94 ATOM 286 C ILE 37 -22.168 28.875 4.885 1.00 94.94 ATOM 287 O ILE 37 -22.227 28.615 3.684 1.00 94.94 ATOM 288 CB ILE 37 -20.987 27.273 6.184 1.00 94.94 ATOM 289 CG1 ILE 37 -21.882 26.179 5.576 1.00 94.94 ATOM 290 CG2 ILE 37 -19.782 26.319 6.111 1.00 94.94 ATOM 291 CD1 ILE 37 -20.897 25.012 5.569 1.00 94.94 ATOM 292 N SER 38 -23.331 29.297 5.336 1.00 99.73 ATOM 293 CA SER 38 -24.096 29.422 3.768 1.00 99.73 ATOM 294 C SER 38 -23.401 30.048 2.545 1.00 99.73 ATOM 295 O SER 38 -23.378 29.641 1.384 1.00 99.73 ATOM 296 CB SER 38 -25.367 30.008 4.315 1.00 99.73 ATOM 297 OG SER 38 -26.233 29.512 5.325 1.00 99.73 ATOM 298 N SER 39 -22.732 31.178 2.764 1.00 92.93 ATOM 299 CA SER 39 -21.992 31.931 1.680 1.00 92.93 ATOM 300 C SER 39 -20.853 30.986 1.319 1.00 92.93 ATOM 301 O SER 39 -20.420 30.745 0.193 1.00 92.93 ATOM 302 CB SER 39 -21.682 33.351 2.057 1.00 92.93 ATOM 303 OG SER 39 -22.744 34.230 2.393 1.00 92.93 ATOM 304 N PHE 40 -20.234 30.331 2.310 1.00 97.71 ATOM 305 CA PHE 40 -19.183 29.495 2.291 1.00 97.71 ATOM 306 C PHE 40 -19.834 28.215 1.755 1.00 97.71 ATOM 307 O PHE 40 -19.290 27.189 1.350 1.00 97.71 ATOM 308 CB PHE 40 -18.492 29.179 3.582 1.00 97.71 ATOM 309 CG PHE 40 -17.860 30.424 4.104 1.00 97.71 ATOM 310 CD1 PHE 40 -17.826 30.641 5.450 1.00 97.71 ATOM 311 CD2 PHE 40 -17.327 31.319 3.222 1.00 97.71 ATOM 312 CE1 PHE 40 -17.260 31.753 5.916 1.00 97.71 ATOM 313 CE2 PHE 40 -16.761 32.432 3.687 1.00 97.71 ATOM 314 CZ PHE 40 -16.728 32.649 5.035 1.00 97.71 ATOM 315 N ILE 41 -21.186 28.260 1.742 1.00 95.27 ATOM 316 CA ILE 41 -22.139 27.310 1.369 1.00 95.27 ATOM 317 C ILE 41 -22.144 27.705 -0.103 1.00 95.27 ATOM 318 O ILE 41 -23.002 28.346 -0.708 1.00 95.27 ATOM 319 CB ILE 41 -23.618 27.641 1.509 1.00 95.27 ATOM 320 CG1 ILE 41 -24.576 26.638 1.114 1.00 95.27 ATOM 321 CG2 ILE 41 -24.073 28.136 2.891 1.00 95.27 ATOM 322 CD1 ILE 41 -25.639 26.748 2.207 1.00 95.27 ATOM 323 N GLY 42 -21.103 27.318 -0.835 1.00 97.70 ATOM 324 CA GLY 42 -20.957 27.683 -2.310 1.00 97.70 ATOM 325 C GLY 42 -22.023 26.894 -3.073 1.00 97.70 ATOM 326 O GLY 42 -21.890 25.902 -3.789 1.00 97.70 ATOM 327 N ARG 43 -23.254 27.342 -2.945 1.00 94.00 ATOM 328 CA ARG 43 -24.474 26.548 -3.290 1.00 94.00 ATOM 329 C ARG 43 -24.626 26.730 -4.799 1.00 94.00 ATOM 330 O ARG 43 -25.563 27.219 -5.427 1.00 94.00 ATOM 331 CB ARG 43 -25.725 27.348 -3.070 1.00 94.00 ATOM 332 CG ARG 43 -25.854 27.349 -1.546 1.00 94.00 ATOM 333 CD ARG 43 -27.130 28.164 -1.323 1.00 94.00 ATOM 334 NE ARG 43 -27.123 28.078 0.165 1.00 94.00 ATOM 335 CZ ARG 43 -28.221 28.766 0.595 1.00 94.00 ATOM 336 NH1 ARG 43 -28.658 28.602 1.878 1.00 94.00 ATOM 337 NH2 ARG 43 -29.322 29.234 -0.061 1.00 94.00 ATOM 338 N SER 44 -23.610 26.300 -5.526 1.00 98.92 ATOM 339 CA SER 44 -23.479 26.518 -6.995 1.00 98.92 ATOM 340 C SER 44 -23.079 25.431 -7.986 1.00 98.92 ATOM 341 O SER 44 -22.455 25.579 -9.036 1.00 98.92 ATOM 342 CB SER 44 -22.464 27.450 -7.572 1.00 98.92 ATOM 343 OG SER 44 -22.698 28.574 -6.736 1.00 98.92 ATOM 344 N LYS 45 -23.435 24.164 -7.702 1.00 92.83 ATOM 345 CA LYS 45 -23.329 22.941 -8.496 1.00 92.83 ATOM 346 C LYS 45 -22.485 22.351 -9.616 1.00 92.83 ATOM 347 O LYS 45 -22.857 21.613 -10.528 1.00 92.83 ATOM 348 CB LYS 45 -24.562 22.373 -9.132 1.00 92.83 ATOM 349 CG LYS 45 -25.770 22.644 -8.234 1.00 92.83 ATOM 350 CD LYS 45 -27.029 22.064 -8.884 1.00 92.83 ATOM 351 CE LYS 45 -28.123 22.524 -7.917 1.00 92.83 ATOM 352 NZ LYS 45 -29.373 21.963 -8.536 1.00 92.83 TER END