####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS163_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS163_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.56 4.56 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 9 - 27 1.97 6.30 LONGEST_CONTINUOUS_SEGMENT: 19 10 - 28 2.00 5.83 LCS_AVERAGE: 32.80 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.74 5.64 LCS_AVERAGE: 16.68 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 6 44 3 3 3 5 19 25 27 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT V 3 V 3 4 8 44 5 5 7 11 18 23 27 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT Q 4 Q 4 4 8 44 3 4 7 12 18 25 28 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT G 5 G 5 4 8 44 3 4 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT P 6 P 6 4 8 44 2 3 5 10 19 25 29 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT W 7 W 7 3 8 44 3 3 5 6 7 9 12 26 34 36 39 40 41 42 43 43 43 43 43 43 LCS_GDT V 8 V 8 3 11 44 3 3 6 15 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT G 9 G 9 9 19 44 8 12 13 15 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT S 10 S 10 9 19 44 8 9 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT S 11 S 11 9 19 44 8 9 10 16 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT Y 12 Y 12 9 19 44 8 9 10 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT V 13 V 13 9 19 44 8 9 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT A 14 A 14 9 19 44 8 9 10 14 20 24 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT E 15 E 15 9 19 44 8 9 10 14 19 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT T 16 T 16 9 19 44 8 9 10 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT G 17 G 17 9 19 44 4 9 10 16 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT Q 18 Q 18 4 19 44 3 3 6 11 17 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT N 19 N 19 3 19 44 3 3 4 7 14 22 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT W 20 W 20 12 19 44 8 12 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT A 21 A 21 12 19 44 8 12 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT S 22 S 22 12 19 44 8 12 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT L 23 L 23 12 19 44 8 12 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT A 24 A 24 12 19 44 8 12 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT A 25 A 25 12 19 44 8 12 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT N 26 N 26 12 19 44 8 12 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT E 27 E 27 12 19 44 8 12 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT L 28 L 28 12 19 44 6 12 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT R 29 R 29 12 14 44 5 12 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT V 30 V 30 12 14 44 4 12 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT T 31 T 31 12 14 44 4 9 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT E 32 E 32 3 14 44 3 3 3 5 8 14 19 25 31 33 39 40 41 42 43 43 43 43 43 43 LCS_GDT R 33 R 33 3 14 44 3 3 8 13 16 22 27 32 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT P 34 P 34 3 14 44 2 3 3 7 10 12 18 22 27 31 34 38 40 42 43 43 43 43 43 43 LCS_GDT F 35 F 35 3 14 44 3 3 9 13 19 25 30 32 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT W 36 W 36 6 10 44 5 5 7 14 19 24 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT I 37 I 37 6 10 44 5 5 8 13 17 24 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT S 38 S 38 6 10 44 5 5 7 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT S 39 S 39 6 10 44 5 5 11 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT F 40 F 40 6 10 44 4 5 7 10 16 25 29 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT I 41 I 41 6 10 44 4 4 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 LCS_GDT G 42 G 42 5 10 44 4 4 7 10 10 11 16 29 33 35 38 40 41 42 43 43 43 43 43 43 LCS_GDT R 43 R 43 5 10 44 4 4 7 10 10 11 14 16 24 30 33 39 41 42 43 43 43 43 43 43 LCS_GDT S 44 S 44 5 10 44 0 3 6 10 10 11 14 16 20 24 31 34 36 39 43 43 43 43 43 43 LCS_GDT K 45 K 45 3 10 44 2 3 6 8 9 11 11 12 12 12 14 15 16 21 22 28 32 36 38 38 LCS_AVERAGE LCS_A: 49.83 ( 16.68 32.80 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 12 13 17 20 25 30 33 37 37 39 40 41 42 43 43 43 43 43 43 GDT PERCENT_AT 18.18 27.27 29.55 38.64 45.45 56.82 68.18 75.00 84.09 84.09 88.64 90.91 93.18 95.45 97.73 97.73 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.27 0.59 0.72 1.41 1.57 1.96 2.36 2.55 2.84 2.84 3.08 3.23 3.47 3.61 3.89 3.89 3.89 3.89 3.89 3.89 GDT RMS_ALL_AT 10.06 5.55 5.54 4.76 4.82 4.73 5.13 5.01 4.87 4.87 4.86 4.77 4.68 4.68 4.61 4.61 4.61 4.61 4.61 4.61 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 4.746 0 0.134 0.176 5.156 2.273 2.182 - LGA V 3 V 3 4.413 0 0.126 1.119 5.602 10.000 5.714 5.443 LGA Q 4 Q 4 4.015 0 0.048 0.810 6.163 14.091 6.667 4.866 LGA G 5 G 5 1.734 0 0.050 0.050 4.925 24.545 24.545 - LGA P 6 P 6 3.790 0 0.032 0.035 5.013 5.909 6.494 4.397 LGA W 7 W 7 5.946 0 0.503 1.039 13.949 2.727 0.779 13.685 LGA V 8 V 8 2.356 0 0.609 0.886 5.350 45.455 31.169 3.156 LGA G 9 G 9 3.593 0 0.514 0.514 3.593 31.818 31.818 - LGA S 10 S 10 0.376 0 0.084 0.088 1.535 70.455 77.273 0.804 LGA S 11 S 11 3.236 0 0.043 0.656 4.752 25.455 19.091 3.696 LGA Y 12 Y 12 2.429 0 0.065 0.762 9.834 49.091 18.485 9.834 LGA V 13 V 13 0.825 0 0.128 1.171 4.942 63.182 51.169 4.942 LGA A 14 A 14 2.914 0 0.030 0.031 3.938 26.818 25.091 - LGA E 15 E 15 3.484 0 0.042 1.335 5.065 18.636 13.333 4.261 LGA T 16 T 16 1.620 0 0.155 0.262 1.896 50.909 62.078 0.486 LGA G 17 G 17 2.120 0 0.685 0.685 2.668 38.636 38.636 - LGA Q 18 Q 18 3.522 0 0.462 0.574 8.456 11.818 5.253 8.456 LGA N 19 N 19 3.530 0 0.213 1.407 9.734 24.545 12.273 7.654 LGA W 20 W 20 3.174 0 0.351 1.097 6.642 30.909 10.390 4.864 LGA A 21 A 21 1.742 0 0.029 0.029 2.352 55.000 54.182 - LGA S 22 S 22 1.556 0 0.018 0.611 2.133 54.545 51.212 1.774 LGA L 23 L 23 2.040 0 0.038 1.387 6.322 51.364 29.545 4.541 LGA A 24 A 24 1.937 0 0.021 0.032 2.182 54.545 51.273 - LGA A 25 A 25 0.800 0 0.035 0.038 1.665 74.091 79.273 - LGA N 26 N 26 0.714 0 0.037 1.118 4.399 82.273 65.000 4.399 LGA E 27 E 27 1.229 0 0.124 1.402 7.323 59.091 33.131 7.323 LGA L 28 L 28 1.798 0 0.077 1.414 5.418 47.727 31.591 5.418 LGA R 29 R 29 2.061 0 0.057 1.891 11.607 44.545 18.678 11.607 LGA V 30 V 30 1.779 0 0.250 1.132 2.449 54.545 51.169 1.803 LGA T 31 T 31 3.298 0 0.683 0.834 7.515 14.545 8.312 5.124 LGA E 32 E 32 6.382 0 0.318 1.028 10.316 0.455 0.202 9.595 LGA R 33 R 33 5.495 0 0.051 0.989 8.852 0.000 0.661 6.029 LGA P 34 P 34 7.805 0 0.647 0.609 9.059 0.000 0.000 9.059 LGA F 35 F 35 4.650 0 0.628 0.857 11.118 5.455 1.983 11.118 LGA W 36 W 36 2.932 0 0.601 0.627 6.488 35.909 10.390 6.472 LGA I 37 I 37 3.614 0 0.110 0.782 6.631 24.545 12.500 6.631 LGA S 38 S 38 2.035 0 0.206 0.570 5.927 42.273 30.000 5.927 LGA S 39 S 39 2.272 0 0.073 0.652 4.807 39.545 31.212 4.807 LGA F 40 F 40 3.506 0 0.148 1.024 9.749 20.455 7.934 9.749 LGA I 41 I 41 1.615 0 0.043 0.607 5.460 34.545 23.636 5.460 LGA G 42 G 42 7.506 0 0.085 0.085 10.936 0.000 0.000 - LGA R 43 R 43 9.992 0 0.642 1.158 14.704 0.000 0.000 14.704 LGA S 44 S 44 12.015 0 0.173 0.754 15.561 0.000 0.000 10.228 LGA K 45 K 45 18.965 0 0.633 1.322 24.853 0.000 0.000 24.853 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.564 4.612 6.211 30.517 23.507 9.662 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 33 2.55 59.659 55.818 1.243 LGA_LOCAL RMSD: 2.554 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.014 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.564 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.772813 * X + -0.399279 * Y + -0.493292 * Z + 25.094555 Y_new = 0.369491 * X + -0.348884 * Y + 0.861253 * Z + -24.818024 Z_new = -0.515982 * X + -0.847854 * Y + -0.122092 * Z + 100.167694 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.445984 0.542153 -1.713815 [DEG: 25.5530 31.0631 -98.1944 ] ZXZ: -2.621443 1.693194 -2.594893 [DEG: -150.1976 97.0129 -148.6764 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS163_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS163_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 33 2.55 55.818 4.56 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS163_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 9 N ALA 2 9.043 39.669 12.820 1.00 0.00 ATOM 10 CA ALA 2 9.195 40.439 11.607 1.00 0.00 ATOM 11 C ALA 2 10.348 39.913 10.766 1.00 0.00 ATOM 12 O ALA 2 11.484 39.822 11.232 1.00 0.00 ATOM 13 CB ALA 2 9.405 41.922 11.964 1.00 0.00 ATOM 14 N VAL 3 10.070 39.552 9.496 1.00 0.00 ATOM 15 CA VAL 3 11.075 39.163 8.519 1.00 0.00 ATOM 16 C VAL 3 10.730 39.850 7.221 1.00 0.00 ATOM 17 O VAL 3 9.600 40.289 7.018 1.00 0.00 ATOM 18 CB VAL 3 11.196 37.656 8.238 1.00 0.00 ATOM 19 CG1 VAL 3 11.520 36.912 9.541 1.00 0.00 ATOM 20 CG2 VAL 3 9.922 37.057 7.609 1.00 0.00 ATOM 21 N GLN 4 11.700 39.975 6.299 1.00 0.00 ATOM 22 CA GLN 4 11.510 40.470 4.953 1.00 0.00 ATOM 23 C GLN 4 10.596 39.577 4.112 1.00 0.00 ATOM 24 O GLN 4 10.528 38.365 4.303 1.00 0.00 ATOM 25 CB GLN 4 12.873 40.660 4.236 1.00 0.00 ATOM 26 CG GLN 4 13.794 41.751 4.846 1.00 0.00 ATOM 27 CD GLN 4 14.518 41.348 6.136 1.00 0.00 ATOM 28 OE1 GLN 4 14.546 40.195 6.581 1.00 0.00 ATOM 29 NE2 GLN 4 15.142 42.360 6.784 1.00 0.00 ATOM 30 N GLY 5 9.856 40.157 3.148 1.00 0.00 ATOM 31 CA GLY 5 8.946 39.392 2.308 1.00 0.00 ATOM 32 C GLY 5 7.803 40.273 1.888 1.00 0.00 ATOM 33 O GLY 5 7.771 41.434 2.290 1.00 0.00 ATOM 34 N PRO 6 6.857 39.798 1.091 1.00 0.00 ATOM 35 CA PRO 6 5.760 40.645 0.629 1.00 0.00 ATOM 36 C PRO 6 4.522 40.385 1.467 1.00 0.00 ATOM 37 O PRO 6 3.594 41.188 1.437 1.00 0.00 ATOM 38 CB PRO 6 5.549 40.173 -0.820 1.00 0.00 ATOM 39 CG PRO 6 5.921 38.685 -0.794 1.00 0.00 ATOM 40 CD PRO 6 7.075 38.640 0.211 1.00 0.00 ATOM 41 N TRP 7 4.470 39.250 2.181 1.00 0.00 ATOM 42 CA TRP 7 3.295 38.771 2.863 1.00 0.00 ATOM 43 C TRP 7 3.792 37.794 3.912 1.00 0.00 ATOM 44 O TRP 7 4.980 37.467 3.919 1.00 0.00 ATOM 45 CB TRP 7 2.314 38.092 1.863 1.00 0.00 ATOM 46 CG TRP 7 0.884 37.933 2.349 1.00 0.00 ATOM 47 CD1 TRP 7 0.212 36.799 2.710 1.00 0.00 ATOM 48 CD2 TRP 7 -0.050 39.020 2.479 1.00 0.00 ATOM 49 NE1 TRP 7 -1.078 37.110 3.094 1.00 0.00 ATOM 50 CE2 TRP 7 -1.258 38.469 2.955 1.00 0.00 ATOM 51 CZ3 TRP 7 -1.054 41.195 2.443 1.00 0.00 ATOM 52 CZ2 TRP 7 -2.367 39.275 3.185 1.00 0.00 ATOM 53 CH2 TRP 7 -2.255 40.650 2.924 1.00 0.00 ATOM 54 CE3 TRP 7 0.069 40.384 2.219 1.00 0.00 ATOM 55 N VAL 8 2.926 37.335 4.844 1.00 0.00 ATOM 56 CA VAL 8 3.270 36.386 5.901 1.00 0.00 ATOM 57 C VAL 8 4.034 35.133 5.446 1.00 0.00 ATOM 58 O VAL 8 3.638 34.404 4.539 1.00 0.00 ATOM 59 CB VAL 8 2.067 36.047 6.789 1.00 0.00 ATOM 60 CG1 VAL 8 0.977 35.279 6.019 1.00 0.00 ATOM 61 CG2 VAL 8 2.504 35.272 8.047 1.00 0.00 ATOM 62 N GLY 9 5.216 34.890 6.060 1.00 0.00 ATOM 63 CA GLY 9 6.126 33.819 5.667 1.00 0.00 ATOM 64 C GLY 9 5.632 32.412 5.904 1.00 0.00 ATOM 65 O GLY 9 5.011 32.104 6.919 1.00 0.00 ATOM 66 N SER 10 5.980 31.485 4.988 1.00 0.00 ATOM 67 CA SER 10 5.616 30.075 5.071 1.00 0.00 ATOM 68 C SER 10 6.194 29.352 6.277 1.00 0.00 ATOM 69 O SER 10 5.514 28.569 6.933 1.00 0.00 ATOM 70 CB SER 10 5.953 29.291 3.776 1.00 0.00 ATOM 71 OG SER 10 7.318 29.450 3.383 1.00 0.00 ATOM 72 N SER 11 7.461 29.625 6.643 1.00 0.00 ATOM 73 CA SER 11 8.045 29.115 7.879 1.00 0.00 ATOM 74 C SER 11 7.373 29.625 9.147 1.00 0.00 ATOM 75 O SER 11 7.205 28.868 10.093 1.00 0.00 ATOM 76 CB SER 11 9.579 29.309 7.976 1.00 0.00 ATOM 77 OG SER 11 9.972 30.671 7.768 1.00 0.00 ATOM 78 N TYR 12 6.930 30.899 9.199 1.00 0.00 ATOM 79 CA TYR 12 6.205 31.464 10.336 1.00 0.00 ATOM 80 C TYR 12 4.868 30.761 10.591 1.00 0.00 ATOM 81 O TYR 12 4.508 30.442 11.725 1.00 0.00 ATOM 82 CB TYR 12 6.000 32.991 10.100 1.00 0.00 ATOM 83 CG TYR 12 5.351 33.779 11.221 1.00 0.00 ATOM 84 CD1 TYR 12 5.272 33.347 12.561 1.00 0.00 ATOM 85 CD2 TYR 12 4.845 35.050 10.904 1.00 0.00 ATOM 86 CE1 TYR 12 4.669 34.150 13.538 1.00 0.00 ATOM 87 CE2 TYR 12 4.251 35.858 11.882 1.00 0.00 ATOM 88 CZ TYR 12 4.151 35.401 13.197 1.00 0.00 ATOM 89 OH TYR 12 3.552 36.226 14.172 1.00 0.00 ATOM 90 N VAL 13 4.100 30.450 9.529 1.00 0.00 ATOM 91 CA VAL 13 2.859 29.706 9.688 1.00 0.00 ATOM 92 C VAL 13 3.090 28.224 9.973 1.00 0.00 ATOM 93 O VAL 13 2.239 27.545 10.542 1.00 0.00 ATOM 94 CB VAL 13 1.880 29.910 8.539 1.00 0.00 ATOM 95 CG1 VAL 13 1.532 31.411 8.454 1.00 0.00 ATOM 96 CG2 VAL 13 2.439 29.408 7.199 1.00 0.00 ATOM 97 N ALA 14 4.276 27.675 9.635 1.00 0.00 ATOM 98 CA ALA 14 4.714 26.384 10.131 1.00 0.00 ATOM 99 C ALA 14 5.061 26.389 11.623 1.00 0.00 ATOM 100 O ALA 14 4.643 25.496 12.355 1.00 0.00 ATOM 101 CB ALA 14 5.909 25.873 9.304 1.00 0.00 ATOM 102 N GLU 15 5.809 27.411 12.106 1.00 0.00 ATOM 103 CA GLU 15 6.174 27.586 13.509 1.00 0.00 ATOM 104 C GLU 15 4.989 27.796 14.429 1.00 0.00 ATOM 105 O GLU 15 4.891 27.189 15.492 1.00 0.00 ATOM 106 CB GLU 15 7.080 28.834 13.694 1.00 0.00 ATOM 107 CG GLU 15 8.513 28.659 13.154 1.00 0.00 ATOM 108 CD GLU 15 9.300 29.954 13.217 1.00 0.00 ATOM 109 OE1 GLU 15 8.816 30.998 12.705 1.00 0.00 ATOM 110 OE2 GLU 15 10.469 29.922 13.676 1.00 0.00 ATOM 111 N THR 16 4.055 28.683 14.037 1.00 0.00 ATOM 112 CA THR 16 2.833 28.926 14.796 1.00 0.00 ATOM 113 C THR 16 1.869 27.761 14.733 1.00 0.00 ATOM 114 O THR 16 1.317 27.349 15.749 1.00 0.00 ATOM 115 CB THR 16 2.108 30.210 14.407 1.00 0.00 ATOM 116 CG2 THR 16 2.922 31.416 14.885 1.00 0.00 ATOM 117 OG1 THR 16 1.956 30.344 13.001 1.00 0.00 ATOM 118 N GLY 17 1.661 27.173 13.537 1.00 0.00 ATOM 119 CA GLY 17 0.788 26.025 13.349 1.00 0.00 ATOM 120 C GLY 17 -0.314 26.323 12.372 1.00 0.00 ATOM 121 O GLY 17 -0.520 27.445 11.920 1.00 0.00 ATOM 122 N GLN 18 -1.096 25.295 11.995 1.00 0.00 ATOM 123 CA GLN 18 -1.999 25.361 10.855 1.00 0.00 ATOM 124 C GLN 18 -3.360 25.995 11.143 1.00 0.00 ATOM 125 O GLN 18 -4.407 25.513 10.727 1.00 0.00 ATOM 126 CB GLN 18 -2.146 23.964 10.204 1.00 0.00 ATOM 127 CG GLN 18 -0.798 23.321 9.782 1.00 0.00 ATOM 128 CD GLN 18 -0.064 24.149 8.723 1.00 0.00 ATOM 129 OE1 GLN 18 -0.389 24.106 7.536 1.00 0.00 ATOM 130 NE2 GLN 18 0.951 24.943 9.142 1.00 0.00 ATOM 131 N ASN 19 -3.341 27.147 11.840 1.00 0.00 ATOM 132 CA ASN 19 -4.382 28.159 11.804 1.00 0.00 ATOM 133 C ASN 19 -3.716 29.449 11.278 1.00 0.00 ATOM 134 O ASN 19 -4.286 30.537 11.266 1.00 0.00 ATOM 135 CB ASN 19 -5.071 28.253 13.200 1.00 0.00 ATOM 136 CG ASN 19 -6.141 29.340 13.295 1.00 0.00 ATOM 137 OD1 ASN 19 -7.028 29.459 12.452 1.00 0.00 ATOM 138 ND2 ASN 19 -6.078 30.164 14.369 1.00 0.00 ATOM 139 N TRP 20 -2.473 29.312 10.765 1.00 0.00 ATOM 140 CA TRP 20 -1.756 30.243 9.911 1.00 0.00 ATOM 141 C TRP 20 -1.718 31.704 10.346 1.00 0.00 ATOM 142 O TRP 20 -1.316 32.039 11.455 1.00 0.00 ATOM 143 CB TRP 20 -2.202 30.081 8.428 1.00 0.00 ATOM 144 CG TRP 20 -2.309 28.636 7.965 1.00 0.00 ATOM 145 CD1 TRP 20 -1.324 27.760 7.603 1.00 0.00 ATOM 146 CD2 TRP 20 -3.550 27.910 7.876 1.00 0.00 ATOM 147 CE2 TRP 20 -3.231 26.602 7.454 1.00 0.00 ATOM 148 NE1 TRP 20 -1.868 26.532 7.299 1.00 0.00 ATOM 149 CE3 TRP 20 -4.870 28.280 8.133 1.00 0.00 ATOM 150 CZ3 TRP 20 -5.869 27.311 7.963 1.00 0.00 ATOM 151 CZ2 TRP 20 -4.220 25.646 7.279 1.00 0.00 ATOM 152 CH2 TRP 20 -5.550 26.012 7.540 1.00 0.00 ATOM 153 N ALA 21 -2.109 32.638 9.451 1.00 0.00 ATOM 154 CA ALA 21 -2.102 34.067 9.693 1.00 0.00 ATOM 155 C ALA 21 -2.976 34.496 10.868 1.00 0.00 ATOM 156 O ALA 21 -2.629 35.401 11.623 1.00 0.00 ATOM 157 CB ALA 21 -2.543 34.802 8.415 1.00 0.00 ATOM 158 N SER 22 -4.129 33.825 11.066 1.00 0.00 ATOM 159 CA SER 22 -4.978 33.993 12.235 1.00 0.00 ATOM 160 C SER 22 -4.287 33.581 13.520 1.00 0.00 ATOM 161 O SER 22 -4.376 34.270 14.531 1.00 0.00 ATOM 162 CB SER 22 -6.287 33.175 12.125 1.00 0.00 ATOM 163 OG SER 22 -6.998 33.536 10.941 1.00 0.00 ATOM 164 N LEU 23 -3.545 32.455 13.509 1.00 0.00 ATOM 165 CA LEU 23 -2.757 31.993 14.641 1.00 0.00 ATOM 166 C LEU 23 -1.583 32.891 14.981 1.00 0.00 ATOM 167 O LEU 23 -1.309 33.174 16.144 1.00 0.00 ATOM 168 CB LEU 23 -2.284 30.546 14.413 1.00 0.00 ATOM 169 CG LEU 23 -1.860 29.762 15.674 1.00 0.00 ATOM 170 CD1 LEU 23 -2.889 29.795 16.814 1.00 0.00 ATOM 171 CD2 LEU 23 -1.592 28.304 15.291 1.00 0.00 ATOM 172 N ALA 24 -0.895 33.421 13.954 1.00 0.00 ATOM 173 CA ALA 24 0.100 34.466 14.091 1.00 0.00 ATOM 174 C ALA 24 -0.475 35.739 14.709 1.00 0.00 ATOM 175 O ALA 24 0.116 36.361 15.590 1.00 0.00 ATOM 176 CB ALA 24 0.686 34.769 12.699 1.00 0.00 ATOM 177 N ALA 25 -1.697 36.140 14.305 1.00 0.00 ATOM 178 CA ALA 25 -2.437 37.206 14.946 1.00 0.00 ATOM 179 C ALA 25 -2.807 36.918 16.396 1.00 0.00 ATOM 180 O ALA 25 -2.711 37.799 17.248 1.00 0.00 ATOM 181 CB ALA 25 -3.681 37.561 14.125 1.00 0.00 ATOM 182 N ASN 26 -3.192 35.664 16.730 1.00 0.00 ATOM 183 CA ASN 26 -3.386 35.241 18.108 1.00 0.00 ATOM 184 C ASN 26 -2.103 35.356 18.944 1.00 0.00 ATOM 185 O ASN 26 -2.139 35.868 20.061 1.00 0.00 ATOM 186 CB ASN 26 -3.874 33.761 18.240 1.00 0.00 ATOM 187 CG ASN 26 -5.136 33.367 17.466 1.00 0.00 ATOM 188 OD1 ASN 26 -5.252 32.220 17.026 1.00 0.00 ATOM 189 ND2 ASN 26 -6.132 34.261 17.319 1.00 0.00 ATOM 190 N GLU 27 -0.955 34.895 18.391 1.00 0.00 ATOM 191 CA GLU 27 0.372 34.924 18.996 1.00 0.00 ATOM 192 C GLU 27 0.932 36.322 19.231 1.00 0.00 ATOM 193 O GLU 27 1.368 36.659 20.331 1.00 0.00 ATOM 194 CB GLU 27 1.358 34.187 18.043 1.00 0.00 ATOM 195 CG GLU 27 2.843 34.123 18.502 1.00 0.00 ATOM 196 CD GLU 27 3.812 34.146 17.324 1.00 0.00 ATOM 197 OE1 GLU 27 4.714 33.272 17.254 1.00 0.00 ATOM 198 OE2 GLU 27 3.694 35.082 16.488 1.00 0.00 ATOM 199 N LEU 28 0.917 37.189 18.199 1.00 0.00 ATOM 200 CA LEU 28 1.626 38.459 18.235 1.00 0.00 ATOM 201 C LEU 28 0.696 39.587 18.663 1.00 0.00 ATOM 202 O LEU 28 1.109 40.717 18.912 1.00 0.00 ATOM 203 CB LEU 28 2.222 38.712 16.822 1.00 0.00 ATOM 204 CG LEU 28 3.172 39.920 16.658 1.00 0.00 ATOM 205 CD1 LEU 28 4.370 39.860 17.619 1.00 0.00 ATOM 206 CD2 LEU 28 3.649 40.020 15.199 1.00 0.00 ATOM 207 N ARG 29 -0.601 39.263 18.808 1.00 0.00 ATOM 208 CA ARG 29 -1.662 40.110 19.309 1.00 0.00 ATOM 209 C ARG 29 -1.870 41.430 18.580 1.00 0.00 ATOM 210 O ARG 29 -2.062 42.506 19.145 1.00 0.00 ATOM 211 CB ARG 29 -1.701 40.166 20.860 1.00 0.00 ATOM 212 CG ARG 29 -2.948 40.822 21.511 1.00 0.00 ATOM 213 CD ARG 29 -4.302 40.640 20.802 1.00 0.00 ATOM 214 NE ARG 29 -4.583 39.177 20.667 1.00 0.00 ATOM 215 CZ ARG 29 -5.494 38.685 19.813 1.00 0.00 ATOM 216 NH1 ARG 29 -5.873 37.415 19.913 1.00 0.00 ATOM 217 NH2 ARG 29 -6.017 39.406 18.825 1.00 0.00 ATOM 218 N VAL 30 -1.970 41.319 17.249 1.00 0.00 ATOM 219 CA VAL 30 -2.701 42.259 16.426 1.00 0.00 ATOM 220 C VAL 30 -4.147 41.788 16.387 1.00 0.00 ATOM 221 O VAL 30 -4.492 40.743 16.938 1.00 0.00 ATOM 222 CB VAL 30 -2.135 42.376 15.013 1.00 0.00 ATOM 223 CG1 VAL 30 -0.743 43.021 15.094 1.00 0.00 ATOM 224 CG2 VAL 30 -2.046 41.000 14.328 1.00 0.00 ATOM 225 N THR 31 -5.076 42.538 15.764 1.00 0.00 ATOM 226 CA THR 31 -6.378 41.981 15.390 1.00 0.00 ATOM 227 C THR 31 -6.222 40.884 14.347 1.00 0.00 ATOM 228 O THR 31 -5.383 40.991 13.456 1.00 0.00 ATOM 229 CB THR 31 -7.344 43.014 14.813 1.00 0.00 ATOM 230 CG2 THR 31 -8.805 42.548 14.903 1.00 0.00 ATOM 231 OG1 THR 31 -7.252 44.246 15.508 1.00 0.00 ATOM 232 N GLU 32 -7.026 39.809 14.418 1.00 0.00 ATOM 233 CA GLU 32 -7.062 38.686 13.500 1.00 0.00 ATOM 234 C GLU 32 -7.422 39.050 12.060 1.00 0.00 ATOM 235 O GLU 32 -8.535 38.828 11.582 1.00 0.00 ATOM 236 CB GLU 32 -8.026 37.598 14.047 1.00 0.00 ATOM 237 CG GLU 32 -7.502 36.804 15.279 1.00 0.00 ATOM 238 CD GLU 32 -7.406 37.536 16.617 1.00 0.00 ATOM 239 OE1 GLU 32 -6.920 36.890 17.582 1.00 0.00 ATOM 240 OE2 GLU 32 -7.770 38.732 16.745 1.00 0.00 ATOM 241 N ARG 33 -6.462 39.649 11.334 1.00 0.00 ATOM 242 CA ARG 33 -6.559 40.048 9.949 1.00 0.00 ATOM 243 C ARG 33 -5.178 39.813 9.338 1.00 0.00 ATOM 244 O ARG 33 -4.187 40.189 9.966 1.00 0.00 ATOM 245 CB ARG 33 -6.892 41.563 9.803 1.00 0.00 ATOM 246 CG ARG 33 -8.181 42.043 10.510 1.00 0.00 ATOM 247 CD ARG 33 -9.486 41.474 9.940 1.00 0.00 ATOM 248 NE ARG 33 -10.616 42.037 10.757 1.00 0.00 ATOM 249 CZ ARG 33 -11.169 41.437 11.825 1.00 0.00 ATOM 250 NH1 ARG 33 -12.191 42.033 12.445 1.00 0.00 ATOM 251 NH2 ARG 33 -10.742 40.270 12.299 1.00 0.00 ATOM 252 N PRO 34 -4.999 39.231 8.149 1.00 0.00 ATOM 253 CA PRO 34 -3.683 38.761 7.711 1.00 0.00 ATOM 254 C PRO 34 -2.800 39.907 7.262 1.00 0.00 ATOM 255 O PRO 34 -1.579 39.759 7.246 1.00 0.00 ATOM 256 CB PRO 34 -4.003 37.805 6.548 1.00 0.00 ATOM 257 CG PRO 34 -5.362 38.278 6.021 1.00 0.00 ATOM 258 CD PRO 34 -6.075 38.723 7.297 1.00 0.00 ATOM 259 N PHE 35 -3.393 41.056 6.886 1.00 0.00 ATOM 260 CA PHE 35 -2.691 42.264 6.499 1.00 0.00 ATOM 261 C PHE 35 -1.894 42.885 7.644 1.00 0.00 ATOM 262 O PHE 35 -0.810 43.424 7.435 1.00 0.00 ATOM 263 CB PHE 35 -3.686 43.285 5.880 1.00 0.00 ATOM 264 CG PHE 35 -3.017 44.492 5.259 1.00 0.00 ATOM 265 CD1 PHE 35 -1.853 44.384 4.472 1.00 0.00 ATOM 266 CD2 PHE 35 -3.577 45.765 5.454 1.00 0.00 ATOM 267 CE1 PHE 35 -1.252 45.521 3.919 1.00 0.00 ATOM 268 CE2 PHE 35 -2.982 46.907 4.902 1.00 0.00 ATOM 269 CZ PHE 35 -1.816 46.784 4.136 1.00 0.00 ATOM 270 N TRP 36 -2.402 42.823 8.893 1.00 0.00 ATOM 271 CA TRP 36 -1.687 43.322 10.057 1.00 0.00 ATOM 272 C TRP 36 -0.436 42.517 10.377 1.00 0.00 ATOM 273 O TRP 36 0.637 43.073 10.590 1.00 0.00 ATOM 274 CB TRP 36 -2.602 43.378 11.301 1.00 0.00 ATOM 275 CG TRP 36 -3.886 44.204 11.238 1.00 0.00 ATOM 276 CD1 TRP 36 -4.918 44.061 12.122 1.00 0.00 ATOM 277 CD2 TRP 36 -4.258 45.307 10.371 1.00 0.00 ATOM 278 CE2 TRP 36 -5.537 45.742 10.793 1.00 0.00 ATOM 279 NE1 TRP 36 -5.919 44.966 11.860 1.00 0.00 ATOM 280 CE3 TRP 36 -3.606 45.950 9.313 1.00 0.00 ATOM 281 CZ3 TRP 36 -4.256 47.029 8.693 1.00 0.00 ATOM 282 CZ2 TRP 36 -6.179 46.803 10.169 1.00 0.00 ATOM 283 CH2 TRP 36 -5.525 47.446 9.109 1.00 0.00 ATOM 284 N ILE 37 -0.516 41.168 10.339 1.00 0.00 ATOM 285 CA ILE 37 0.650 40.292 10.444 1.00 0.00 ATOM 286 C ILE 37 1.611 40.514 9.295 1.00 0.00 ATOM 287 O ILE 37 2.822 40.636 9.477 1.00 0.00 ATOM 288 CB ILE 37 0.239 38.824 10.554 1.00 0.00 ATOM 289 CG1 ILE 37 -0.408 38.551 11.930 1.00 0.00 ATOM 290 CG2 ILE 37 1.437 37.874 10.326 1.00 0.00 ATOM 291 CD1 ILE 37 0.536 38.765 13.125 1.00 0.00 ATOM 292 N SER 38 1.074 40.697 8.077 1.00 0.00 ATOM 293 CA SER 38 1.850 41.017 6.889 1.00 0.00 ATOM 294 C SER 38 2.195 42.492 6.800 1.00 0.00 ATOM 295 O SER 38 2.515 43.005 5.727 1.00 0.00 ATOM 296 CB SER 38 1.101 40.632 5.596 1.00 0.00 ATOM 297 OG SER 38 0.728 39.254 5.635 1.00 0.00 ATOM 298 N SER 39 2.139 43.205 7.946 1.00 0.00 ATOM 299 CA SER 39 2.705 44.524 8.152 1.00 0.00 ATOM 300 C SER 39 3.654 44.540 9.332 1.00 0.00 ATOM 301 O SER 39 4.189 45.586 9.683 1.00 0.00 ATOM 302 CB SER 39 1.630 45.616 8.354 1.00 0.00 ATOM 303 OG SER 39 0.831 45.732 7.176 1.00 0.00 ATOM 304 N PHE 40 3.947 43.371 9.935 1.00 0.00 ATOM 305 CA PHE 40 5.171 43.166 10.694 1.00 0.00 ATOM 306 C PHE 40 6.128 42.440 9.774 1.00 0.00 ATOM 307 O PHE 40 7.257 42.867 9.527 1.00 0.00 ATOM 308 CB PHE 40 4.937 42.321 11.972 1.00 0.00 ATOM 309 CG PHE 40 4.397 43.210 13.053 1.00 0.00 ATOM 310 CD1 PHE 40 3.018 43.444 13.171 1.00 0.00 ATOM 311 CD2 PHE 40 5.278 43.864 13.932 1.00 0.00 ATOM 312 CE1 PHE 40 2.528 44.328 14.139 1.00 0.00 ATOM 313 CE2 PHE 40 4.788 44.745 14.906 1.00 0.00 ATOM 314 CZ PHE 40 3.411 44.974 15.011 1.00 0.00 ATOM 315 N ILE 41 5.653 41.330 9.172 1.00 0.00 ATOM 316 CA ILE 41 6.307 40.687 8.049 1.00 0.00 ATOM 317 C ILE 41 6.332 41.637 6.857 1.00 0.00 ATOM 318 O ILE 41 5.342 42.282 6.519 1.00 0.00 ATOM 319 CB ILE 41 5.652 39.359 7.665 1.00 0.00 ATOM 320 CG1 ILE 41 5.370 38.453 8.895 1.00 0.00 ATOM 321 CG2 ILE 41 6.516 38.636 6.608 1.00 0.00 ATOM 322 CD1 ILE 41 6.611 37.945 9.636 1.00 0.00 ATOM 323 N GLY 42 7.495 41.786 6.204 1.00 0.00 ATOM 324 CA GLY 42 7.648 42.678 5.072 1.00 0.00 ATOM 325 C GLY 42 7.836 44.128 5.411 1.00 0.00 ATOM 326 O GLY 42 7.751 44.971 4.522 1.00 0.00 ATOM 327 N ARG 43 8.053 44.489 6.691 1.00 0.00 ATOM 328 CA ARG 43 8.393 45.858 7.057 1.00 0.00 ATOM 329 C ARG 43 9.675 45.932 7.875 1.00 0.00 ATOM 330 O ARG 43 10.051 46.997 8.360 1.00 0.00 ATOM 331 CB ARG 43 7.261 46.540 7.868 1.00 0.00 ATOM 332 CG ARG 43 5.872 46.527 7.194 1.00 0.00 ATOM 333 CD ARG 43 5.735 47.282 5.865 1.00 0.00 ATOM 334 NE ARG 43 4.328 47.051 5.383 1.00 0.00 ATOM 335 CZ ARG 43 3.907 45.885 4.869 1.00 0.00 ATOM 336 NH1 ARG 43 2.607 45.597 4.872 1.00 0.00 ATOM 337 NH2 ARG 43 4.752 44.948 4.444 1.00 0.00 ATOM 338 N SER 44 10.406 44.810 8.045 1.00 0.00 ATOM 339 CA SER 44 11.615 44.789 8.859 1.00 0.00 ATOM 340 C SER 44 12.830 45.370 8.152 1.00 0.00 ATOM 341 O SER 44 13.338 44.816 7.177 1.00 0.00 ATOM 342 CB SER 44 11.994 43.363 9.338 1.00 0.00 ATOM 343 OG SER 44 12.217 42.483 8.239 1.00 0.00 ATOM 344 N LYS 45 13.362 46.477 8.691 1.00 0.00 ATOM 345 CA LYS 45 14.509 47.199 8.177 1.00 0.00 ATOM 346 C LYS 45 15.712 46.942 9.069 1.00 0.00 ATOM 347 O LYS 45 16.776 47.531 8.901 1.00 0.00 ATOM 348 CB LYS 45 14.231 48.724 8.303 1.00 0.00 ATOM 349 CG LYS 45 12.900 49.201 7.693 1.00 0.00 ATOM 350 CD LYS 45 12.451 50.586 8.204 1.00 0.00 ATOM 351 CE LYS 45 11.582 50.580 9.480 1.00 0.00 ATOM 352 NZ LYS 45 12.335 50.211 10.696 1.00 0.00 TER END