####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS124_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS124_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 5 - 33 4.99 15.36 LONGEST_CONTINUOUS_SEGMENT: 29 6 - 34 4.95 15.51 LONGEST_CONTINUOUS_SEGMENT: 29 7 - 35 4.92 15.33 LONGEST_CONTINUOUS_SEGMENT: 29 8 - 36 4.89 15.11 LCS_AVERAGE: 57.75 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 19 - 33 1.95 19.03 LCS_AVERAGE: 23.71 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.97 17.65 LONGEST_CONTINUOUS_SEGMENT: 10 21 - 30 0.92 18.44 LCS_AVERAGE: 15.44 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 8 17 4 4 6 6 8 9 10 11 11 12 12 13 15 16 17 18 18 21 23 25 LCS_GDT V 3 V 3 4 8 28 4 5 7 8 9 9 10 11 11 13 18 22 24 27 28 30 32 33 34 34 LCS_GDT Q 4 Q 4 4 8 28 4 4 6 8 9 9 10 11 11 13 14 22 24 27 28 30 31 32 34 34 LCS_GDT G 5 G 5 5 8 29 4 4 7 8 9 9 10 13 15 17 20 22 24 27 28 30 32 33 34 34 LCS_GDT P 6 P 6 5 8 29 3 4 7 8 9 9 11 14 14 17 19 22 24 27 28 30 32 33 34 34 LCS_GDT W 7 W 7 5 8 29 3 5 7 8 9 9 10 14 15 17 20 23 24 27 28 30 32 33 34 34 LCS_GDT V 8 V 8 5 10 29 3 5 7 8 9 11 13 16 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT G 9 G 9 9 10 29 5 8 9 9 9 11 13 16 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT S 10 S 10 9 10 29 4 8 9 9 9 11 13 16 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT S 11 S 11 9 10 29 5 8 9 9 9 11 13 15 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT Y 12 Y 12 9 10 29 5 8 9 9 9 11 13 16 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT V 13 V 13 9 10 29 5 8 9 9 9 11 13 16 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT A 14 A 14 9 10 29 5 8 9 9 9 11 13 16 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT E 15 E 15 9 10 29 5 8 9 9 9 11 13 15 16 17 21 25 26 27 28 30 32 33 34 34 LCS_GDT T 16 T 16 9 10 29 4 8 9 9 9 11 13 15 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT G 17 G 17 9 10 29 4 5 9 9 9 11 13 16 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT Q 18 Q 18 4 10 29 3 3 5 7 9 11 13 16 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT N 19 N 19 4 15 29 3 3 4 8 12 13 15 15 16 20 25 25 26 27 28 30 32 33 34 34 LCS_GDT W 20 W 20 10 15 29 4 6 8 10 13 13 15 15 15 17 19 21 24 26 28 30 31 33 34 34 LCS_GDT A 21 A 21 10 15 29 4 9 11 11 13 13 15 15 16 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT S 22 S 22 10 15 29 4 9 11 11 13 13 15 15 17 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT L 23 L 23 10 15 29 4 9 11 11 13 13 15 15 17 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT A 24 A 24 10 15 29 4 9 11 11 13 13 15 15 16 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT A 25 A 25 10 15 29 4 9 11 11 13 13 15 16 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT N 26 N 26 10 15 29 4 9 11 11 13 13 15 16 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT E 27 E 27 10 15 29 4 9 11 11 13 13 15 15 16 20 25 25 26 27 28 30 32 33 34 34 LCS_GDT L 28 L 28 10 15 29 4 9 11 11 13 13 15 15 16 20 25 25 26 27 28 30 32 33 34 34 LCS_GDT R 29 R 29 10 15 29 4 9 11 11 13 13 15 16 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT V 30 V 30 10 15 29 3 8 11 11 13 13 15 16 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT T 31 T 31 9 15 29 3 7 11 11 13 13 15 16 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT E 32 E 32 9 15 29 3 6 10 11 13 13 15 16 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT R 33 R 33 4 15 29 3 4 6 8 12 12 15 16 18 21 25 25 26 27 28 30 32 33 34 34 LCS_GDT P 34 P 34 4 11 29 3 4 5 6 8 9 13 16 18 19 25 25 26 27 28 30 32 33 34 34 LCS_GDT F 35 F 35 4 6 29 3 4 5 5 6 6 6 9 9 14 18 20 21 27 28 30 32 33 34 34 LCS_GDT W 36 W 36 4 6 29 3 4 5 5 6 6 8 11 11 13 16 20 22 27 28 30 32 33 34 34 LCS_GDT I 37 I 37 4 6 13 3 4 5 5 6 6 8 10 10 10 12 12 12 12 12 14 17 21 27 28 LCS_GDT S 38 S 38 3 6 13 0 3 3 5 6 6 6 10 10 10 12 12 12 12 12 13 16 18 21 27 LCS_GDT S 39 S 39 3 5 13 0 3 3 4 5 6 8 10 10 10 12 12 12 12 12 13 13 13 13 14 LCS_GDT F 40 F 40 4 6 13 3 3 4 5 6 6 8 10 10 10 12 12 12 12 12 13 13 13 13 14 LCS_GDT I 41 I 41 4 6 13 3 3 4 5 6 6 8 10 10 10 12 12 12 12 12 13 13 13 13 14 LCS_GDT G 42 G 42 4 6 13 4 4 4 5 6 6 8 10 10 10 12 12 12 12 12 13 13 13 13 14 LCS_GDT R 43 R 43 4 6 13 4 4 4 5 6 6 8 10 10 10 12 12 12 12 12 13 13 13 13 14 LCS_GDT S 44 S 44 4 6 13 4 4 4 5 6 6 8 10 10 10 12 12 12 12 12 13 13 13 13 14 LCS_GDT K 45 K 45 4 6 13 4 4 4 5 6 6 8 10 10 10 12 12 12 12 12 13 13 13 13 14 LCS_AVERAGE LCS_A: 32.30 ( 15.44 23.71 57.75 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 9 11 11 13 13 15 16 18 21 25 25 26 27 28 30 32 33 34 34 GDT PERCENT_AT 11.36 20.45 25.00 25.00 29.55 29.55 34.09 36.36 40.91 47.73 56.82 56.82 59.09 61.36 63.64 68.18 72.73 75.00 77.27 77.27 GDT RMS_LOCAL 0.25 0.70 1.06 1.06 1.38 1.38 1.95 2.97 3.23 3.77 4.18 4.15 4.28 4.75 4.69 5.15 5.42 5.57 5.75 5.75 GDT RMS_ALL_AT 22.86 17.80 19.22 19.22 19.27 19.27 19.03 15.73 15.61 15.12 15.44 15.58 15.47 15.59 15.15 15.14 15.11 15.08 14.94 14.94 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 14.504 0 0.605 0.583 15.546 0.000 0.000 - LGA V 3 V 3 9.377 0 0.058 0.128 10.451 0.000 0.000 6.385 LGA Q 4 Q 4 12.187 0 0.120 0.381 21.393 0.000 0.000 20.373 LGA G 5 G 5 10.639 0 0.133 0.133 11.845 0.000 0.000 - LGA P 6 P 6 10.086 0 0.079 0.458 14.115 0.000 0.000 14.115 LGA W 7 W 7 8.049 0 0.395 1.176 16.777 0.000 0.000 16.777 LGA V 8 V 8 3.436 0 0.657 1.479 4.750 17.273 14.286 3.443 LGA G 9 G 9 1.948 0 0.562 0.562 2.119 55.000 55.000 - LGA S 10 S 10 3.753 0 0.123 0.598 7.103 16.364 10.909 7.103 LGA S 11 S 11 5.288 0 0.066 0.107 8.394 3.182 2.121 8.394 LGA Y 12 Y 12 4.381 0 0.047 0.975 14.408 10.000 3.333 14.408 LGA V 13 V 13 1.646 0 0.064 1.052 4.203 66.364 43.896 3.422 LGA A 14 A 14 3.631 0 0.032 0.039 5.459 15.000 12.000 - LGA E 15 E 15 6.052 0 0.048 1.190 10.816 0.455 0.202 10.679 LGA T 16 T 16 5.091 0 0.161 1.132 6.216 1.818 1.818 6.216 LGA G 17 G 17 2.130 0 0.656 0.656 3.328 30.455 30.455 - LGA Q 18 Q 18 2.890 0 0.615 1.418 5.096 14.091 12.121 3.814 LGA N 19 N 19 9.337 0 0.000 1.383 12.028 0.000 0.000 12.028 LGA W 20 W 20 11.200 0 0.602 0.513 22.297 0.000 0.000 22.297 LGA A 21 A 21 7.440 0 0.066 0.055 9.016 0.000 0.000 - LGA S 22 S 22 7.509 0 0.090 0.093 9.628 0.000 0.000 9.628 LGA L 23 L 23 7.250 0 0.062 1.078 11.900 0.000 0.000 11.900 LGA A 24 A 24 6.746 0 0.066 0.097 7.510 0.000 0.000 - LGA A 25 A 25 3.887 0 0.016 0.010 5.007 11.818 10.545 - LGA N 26 N 26 3.180 0 0.018 0.983 5.434 12.727 10.000 5.434 LGA E 27 E 27 5.695 0 0.081 1.009 8.754 0.455 0.202 8.469 LGA L 28 L 28 5.033 0 0.210 0.203 6.414 0.455 0.455 5.750 LGA R 29 R 29 3.242 0 0.042 1.431 13.984 20.909 8.099 13.984 LGA V 30 V 30 1.779 0 0.042 1.125 5.213 59.091 43.117 5.213 LGA T 31 T 31 2.337 0 0.689 1.428 6.189 49.091 31.169 6.189 LGA E 32 E 32 2.173 0 0.031 1.296 4.633 35.455 25.455 4.097 LGA R 33 R 33 2.206 0 0.124 1.544 7.320 30.455 18.182 7.184 LGA P 34 P 34 3.083 0 0.036 0.050 5.135 13.182 10.390 5.135 LGA F 35 F 35 7.421 0 0.100 1.247 12.719 0.000 0.000 12.214 LGA W 36 W 36 8.498 0 0.127 1.209 12.918 0.000 3.506 3.720 LGA I 37 I 37 14.904 0 0.667 1.182 17.243 0.000 0.000 16.666 LGA S 38 S 38 17.787 0 0.683 0.631 21.893 0.000 0.000 17.252 LGA S 39 S 39 22.741 0 0.700 0.833 25.501 0.000 0.000 21.596 LGA F 40 F 40 28.607 0 0.644 0.920 32.456 0.000 0.000 31.501 LGA I 41 I 41 32.194 0 0.077 0.627 33.874 0.000 0.000 29.703 LGA G 42 G 42 38.166 0 0.632 0.632 40.205 0.000 0.000 - LGA R 43 R 43 39.790 0 0.097 1.041 45.294 0.000 0.000 45.294 LGA S 44 S 44 39.957 0 0.113 0.709 41.449 0.000 0.000 38.708 LGA K 45 K 45 42.139 0 0.058 0.275 48.972 0.000 0.000 48.972 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 12.762 12.698 14.139 10.537 7.892 1.818 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 2.97 37.500 35.054 0.521 LGA_LOCAL RMSD: 2.970 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.731 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 12.762 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.985945 * X + 0.107216 * Y + -0.128130 * Z + 132.428162 Y_new = 0.160517 * X + 0.395217 * Y + -0.904454 * Z + 161.300598 Z_new = -0.046333 * X + -0.912309 * Y + -0.406873 * Z + 312.515991 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.980203 0.046349 -1.990303 [DEG: 170.7531 2.6556 -114.0360 ] ZXZ: -0.140729 1.989824 -3.090850 [DEG: -8.0632 114.0085 -177.0927 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS124_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS124_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 2.97 35.054 12.76 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS124_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 9 N ALA 2 -2.578 33.481 9.704 1.00 1.02 N ATOM 10 CA ALA 2 -3.523 34.072 10.603 1.00 1.02 C ATOM 11 CB ALA 2 -3.674 33.264 11.900 1.00 1.02 C ATOM 12 C ALA 2 -2.992 35.415 10.970 1.00 1.02 C ATOM 13 O ALA 2 -3.747 36.376 11.107 1.00 1.02 O ATOM 14 N VAL 3 -1.661 35.517 11.144 1.00 1.28 N ATOM 15 CA VAL 3 -1.111 36.787 11.499 1.00 1.28 C ATOM 16 CB VAL 3 0.279 36.708 12.061 1.00 1.28 C ATOM 17 CG1 VAL 3 0.809 38.136 12.274 1.00 1.28 C ATOM 18 CG2 VAL 3 0.236 35.862 13.345 1.00 1.28 C ATOM 19 C VAL 3 -1.059 37.618 10.255 1.00 1.28 C ATOM 20 O VAL 3 -0.404 37.252 9.279 1.00 1.28 O ATOM 21 N GLN 4 -1.780 38.763 10.268 1.00 1.92 N ATOM 22 CA GLN 4 -1.790 39.684 9.163 1.00 1.92 C ATOM 23 CB GLN 4 -3.179 40.209 8.764 1.00 1.92 C ATOM 24 CG GLN 4 -4.160 39.185 8.198 1.00 1.92 C ATOM 25 CD GLN 4 -5.450 39.944 7.906 1.00 1.92 C ATOM 26 OE1 GLN 4 -5.583 41.118 8.251 1.00 1.92 O ATOM 27 NE2 GLN 4 -6.432 39.259 7.261 1.00 1.92 N ATOM 28 C GLN 4 -1.091 40.918 9.630 1.00 1.92 C ATOM 29 O GLN 4 -1.523 41.572 10.577 1.00 1.92 O ATOM 30 N GLY 5 -0.010 41.296 8.933 1.00 1.33 N ATOM 31 CA GLY 5 0.734 42.455 9.310 1.00 1.33 C ATOM 32 C GLY 5 1.403 42.946 8.072 1.00 1.33 C ATOM 33 O GLY 5 0.968 42.668 6.956 1.00 1.33 O ATOM 34 N PRO 6 2.475 43.658 8.247 1.00 2.42 N ATOM 35 CA PRO 6 3.168 44.197 7.117 1.00 2.42 C ATOM 36 CD PRO 6 2.688 44.445 9.448 1.00 2.42 C ATOM 37 CB PRO 6 4.270 45.077 7.700 1.00 2.42 C ATOM 38 CG PRO 6 3.658 45.564 9.029 1.00 2.42 C ATOM 39 C PRO 6 3.623 43.111 6.200 1.00 2.42 C ATOM 40 O PRO 6 3.758 43.374 5.007 1.00 2.42 O ATOM 41 N TRP 7 3.876 41.897 6.726 1.00 1.54 N ATOM 42 CA TRP 7 4.283 40.814 5.876 1.00 1.54 C ATOM 43 CB TRP 7 5.764 40.436 6.044 1.00 1.54 C ATOM 44 CG TRP 7 6.730 41.535 5.692 1.00 1.54 C ATOM 45 CD2 TRP 7 7.043 42.615 6.584 1.00 1.54 C ATOM 46 CD1 TRP 7 7.442 41.756 4.551 1.00 1.54 C ATOM 47 NE1 TRP 7 8.186 42.907 4.676 1.00 1.54 N ATOM 48 CE2 TRP 7 7.946 43.448 5.925 1.00 1.54 C ATOM 49 CE3 TRP 7 6.609 42.888 7.849 1.00 1.54 C ATOM 50 CZ2 TRP 7 8.431 44.577 6.526 1.00 1.54 C ATOM 51 CZ3 TRP 7 7.098 44.022 8.452 1.00 1.54 C ATOM 52 CH2 TRP 7 7.991 44.850 7.804 1.00 1.54 C ATOM 53 C TRP 7 3.530 39.599 6.318 1.00 1.54 C ATOM 54 O TRP 7 3.336 39.386 7.513 1.00 1.54 O ATOM 55 N VAL 8 3.066 38.772 5.360 1.00 1.96 N ATOM 56 CA VAL 8 2.440 37.539 5.737 1.00 1.96 C ATOM 57 CB VAL 8 0.958 37.497 5.511 1.00 1.96 C ATOM 58 CG1 VAL 8 0.314 38.543 6.435 1.00 1.96 C ATOM 59 CG2 VAL 8 0.659 37.698 4.017 1.00 1.96 C ATOM 60 C VAL 8 3.076 36.451 4.933 1.00 1.96 C ATOM 61 O VAL 8 3.255 36.572 3.722 1.00 1.96 O ATOM 62 N GLY 9 3.442 35.340 5.602 1.00 1.10 N ATOM 63 CA GLY 9 4.077 34.263 4.902 1.00 1.10 C ATOM 64 C GLY 9 3.334 33.017 5.255 1.00 1.10 C ATOM 65 O GLY 9 3.388 32.541 6.388 1.00 1.10 O ATOM 66 N SER 10 2.632 32.444 4.263 1.00 1.71 N ATOM 67 CA SER 10 1.850 31.267 4.496 1.00 1.71 C ATOM 68 CB SER 10 1.046 30.828 3.260 1.00 1.71 C ATOM 69 OG SER 10 0.072 31.810 2.938 1.00 1.71 O ATOM 70 C SER 10 2.747 30.127 4.864 1.00 1.71 C ATOM 71 O SER 10 2.509 29.434 5.851 1.00 1.71 O ATOM 72 N SER 11 3.804 29.897 4.065 1.00 1.69 N ATOM 73 CA SER 11 4.702 28.796 4.280 1.00 1.69 C ATOM 74 CB SER 11 5.676 28.587 3.107 1.00 1.69 C ATOM 75 OG SER 11 6.534 27.489 3.377 1.00 1.69 O ATOM 76 C SER 11 5.553 29.039 5.484 1.00 1.69 C ATOM 77 O SER 11 5.951 28.108 6.180 1.00 1.69 O ATOM 78 N TYR 12 5.857 30.316 5.754 1.00 2.32 N ATOM 79 CA TYR 12 6.807 30.702 6.758 1.00 2.32 C ATOM 80 CB TYR 12 7.048 32.217 6.700 1.00 2.32 C ATOM 81 CG TYR 12 8.435 32.514 7.153 1.00 2.32 C ATOM 82 CD1 TYR 12 9.448 32.412 6.227 1.00 2.32 C ATOM 83 CD2 TYR 12 8.745 32.869 8.445 1.00 2.32 C ATOM 84 CE1 TYR 12 10.749 32.676 6.567 1.00 2.32 C ATOM 85 CE2 TYR 12 10.050 33.137 8.791 1.00 2.32 C ATOM 86 CZ TYR 12 11.053 33.045 7.853 1.00 2.32 C ATOM 87 OH TYR 12 12.390 33.320 8.205 1.00 2.32 O ATOM 88 C TYR 12 6.320 30.323 8.132 1.00 2.32 C ATOM 89 O TYR 12 7.098 29.847 8.958 1.00 2.32 O ATOM 90 N VAL 13 5.019 30.549 8.416 1.00 1.88 N ATOM 91 CA VAL 13 4.428 30.283 9.706 1.00 1.88 C ATOM 92 CB VAL 13 3.016 30.784 9.812 1.00 1.88 C ATOM 93 CG1 VAL 13 2.145 30.010 8.809 1.00 1.88 C ATOM 94 CG2 VAL 13 2.558 30.634 11.273 1.00 1.88 C ATOM 95 C VAL 13 4.402 28.810 9.979 1.00 1.88 C ATOM 96 O VAL 13 4.579 28.368 11.116 1.00 1.88 O ATOM 97 N ALA 14 4.163 28.006 8.932 1.00 0.98 N ATOM 98 CA ALA 14 4.075 26.587 9.094 1.00 0.98 C ATOM 99 CB ALA 14 3.826 25.852 7.766 1.00 0.98 C ATOM 100 C ALA 14 5.384 26.110 9.624 1.00 0.98 C ATOM 101 O ALA 14 5.437 25.196 10.446 1.00 0.98 O ATOM 102 N GLU 15 6.483 26.723 9.153 1.00 1.23 N ATOM 103 CA GLU 15 7.785 26.301 9.563 1.00 1.23 C ATOM 104 CB GLU 15 8.899 27.012 8.767 1.00 1.23 C ATOM 105 CG GLU 15 8.914 26.554 7.302 1.00 1.23 C ATOM 106 CD GLU 15 9.993 27.301 6.526 1.00 1.23 C ATOM 107 OE1 GLU 15 10.604 28.239 7.101 1.00 1.23 O ATOM 108 OE2 GLU 15 10.211 26.943 5.336 1.00 1.23 O ATOM 109 C GLU 15 7.955 26.516 11.039 1.00 1.23 C ATOM 110 O GLU 15 8.509 25.656 11.723 1.00 1.23 O ATOM 111 N THR 16 7.496 27.669 11.572 1.00 2.00 N ATOM 112 CA THR 16 7.624 27.937 12.982 1.00 2.00 C ATOM 113 CB THR 16 7.332 29.368 13.356 1.00 2.00 C ATOM 114 OG1 THR 16 7.712 29.593 14.705 1.00 2.00 O ATOM 115 CG2 THR 16 5.837 29.677 13.173 1.00 2.00 C ATOM 116 C THR 16 6.728 27.039 13.779 1.00 2.00 C ATOM 117 O THR 16 7.155 26.461 14.778 1.00 2.00 O ATOM 118 N GLY 17 5.454 26.886 13.360 1.00 1.15 N ATOM 119 CA GLY 17 4.578 26.016 14.089 1.00 1.15 C ATOM 120 C GLY 17 3.219 26.633 14.184 1.00 1.15 C ATOM 121 O GLY 17 3.062 27.853 14.211 1.00 1.15 O ATOM 122 N GLN 18 2.193 25.768 14.271 1.00 1.63 N ATOM 123 CA GLN 18 0.821 26.180 14.347 1.00 1.63 C ATOM 124 CB GLN 18 -0.138 24.977 14.338 1.00 1.63 C ATOM 125 CG GLN 18 -1.620 25.350 14.414 1.00 1.63 C ATOM 126 CD GLN 18 -2.059 25.842 13.041 1.00 1.63 C ATOM 127 OE1 GLN 18 -1.814 25.193 12.025 1.00 1.63 O ATOM 128 NE2 GLN 18 -2.722 27.030 13.006 1.00 1.63 N ATOM 129 C GLN 18 0.609 26.909 15.635 1.00 1.63 C ATOM 130 O GLN 18 -0.111 27.906 15.685 1.00 1.63 O ATOM 131 N ASN 19 1.231 26.419 16.723 1.00 2.01 N ATOM 132 CA ASN 19 1.010 27.015 18.005 1.00 2.01 C ATOM 133 CB ASN 19 1.594 26.224 19.188 1.00 2.01 C ATOM 134 CG ASN 19 3.107 26.339 19.179 1.00 2.01 C ATOM 135 OD1 ASN 19 3.708 26.722 20.182 1.00 2.01 O ATOM 136 ND2 ASN 19 3.741 26.003 18.024 1.00 2.01 N ATOM 137 C ASN 19 1.596 28.380 18.031 1.00 2.01 C ATOM 138 O ASN 19 1.082 29.263 18.705 1.00 2.01 O ATOM 139 N TRP 20 2.723 28.601 17.343 1.00 2.09 N ATOM 140 CA TRP 20 3.270 29.921 17.370 1.00 2.09 C ATOM 141 CB TRP 20 4.680 29.994 16.762 1.00 2.09 C ATOM 142 CG TRP 20 5.668 29.253 17.632 1.00 2.09 C ATOM 143 CD2 TRP 20 6.019 29.662 18.964 1.00 2.09 C ATOM 144 CD1 TRP 20 6.332 28.085 17.400 1.00 2.09 C ATOM 145 NE1 TRP 20 7.071 27.736 18.508 1.00 2.09 N ATOM 146 CE2 TRP 20 6.888 28.698 19.479 1.00 2.09 C ATOM 147 CE3 TRP 20 5.642 30.746 19.704 1.00 2.09 C ATOM 148 CZ2 TRP 20 7.392 28.808 20.744 1.00 2.09 C ATOM 149 CZ3 TRP 20 6.157 30.859 20.977 1.00 2.09 C ATOM 150 CH2 TRP 20 7.015 29.906 21.485 1.00 2.09 C ATOM 151 C TRP 20 2.330 30.860 16.678 1.00 2.09 C ATOM 152 O TRP 20 2.113 31.972 17.135 1.00 2.09 O ATOM 153 N ALA 21 1.733 30.470 15.542 1.00 1.26 N ATOM 154 CA ALA 21 0.848 31.392 14.886 1.00 1.26 C ATOM 155 CB ALA 21 0.340 30.874 13.527 1.00 1.26 C ATOM 156 C ALA 21 -0.353 31.650 15.746 1.00 1.26 C ATOM 157 O ALA 21 -0.764 32.798 15.904 1.00 1.26 O ATOM 158 N SER 22 -0.966 30.590 16.311 1.00 1.32 N ATOM 159 CA SER 22 -2.148 30.778 17.107 1.00 1.32 C ATOM 160 CB SER 22 -2.877 29.455 17.416 1.00 1.32 C ATOM 161 OG SER 22 -2.060 28.598 18.198 1.00 1.32 O ATOM 162 C SER 22 -1.814 31.445 18.411 1.00 1.32 C ATOM 163 O SER 22 -2.322 32.514 18.741 1.00 1.32 O ATOM 164 N LEU 23 -0.932 30.795 19.187 1.00 2.00 N ATOM 165 CA LEU 23 -0.511 31.193 20.501 1.00 2.00 C ATOM 166 CB LEU 23 0.309 30.083 21.207 1.00 2.00 C ATOM 167 CG LEU 23 0.621 30.285 22.712 1.00 2.00 C ATOM 168 CD1 LEU 23 1.343 29.049 23.270 1.00 2.00 C ATOM 169 CD2 LEU 23 1.412 31.568 23.019 1.00 2.00 C ATOM 170 C LEU 23 0.290 32.460 20.461 1.00 2.00 C ATOM 171 O LEU 23 0.074 33.336 21.295 1.00 2.00 O ATOM 172 N ALA 24 1.245 32.613 19.525 1.00 1.41 N ATOM 173 CA ALA 24 2.005 33.833 19.561 1.00 1.41 C ATOM 174 CB ALA 24 3.213 33.951 18.611 1.00 1.41 C ATOM 175 C ALA 24 1.067 34.947 19.272 1.00 1.41 C ATOM 176 O ALA 24 1.244 36.059 19.766 1.00 1.41 O ATOM 177 N ALA 25 0.067 34.686 18.413 1.00 1.18 N ATOM 178 CA ALA 25 -0.900 35.689 18.080 1.00 1.18 C ATOM 179 CB ALA 25 -1.895 35.203 17.012 1.00 1.18 C ATOM 180 C ALA 25 -1.692 36.045 19.305 1.00 1.18 C ATOM 181 O ALA 25 -1.903 37.221 19.601 1.00 1.18 O ATOM 182 N ASN 26 -2.162 35.030 20.056 1.00 1.69 N ATOM 183 CA ASN 26 -2.986 35.306 21.199 1.00 1.69 C ATOM 184 CB ASN 26 -3.746 34.073 21.726 1.00 1.69 C ATOM 185 CG ASN 26 -4.935 34.599 22.519 1.00 1.69 C ATOM 186 OD1 ASN 26 -4.839 35.627 23.188 1.00 1.69 O ATOM 187 ND2 ASN 26 -6.093 33.892 22.425 1.00 1.69 N ATOM 188 C ASN 26 -2.188 35.896 22.328 1.00 1.69 C ATOM 189 O ASN 26 -2.627 36.850 22.966 1.00 1.69 O ATOM 190 N GLU 27 -0.996 35.336 22.615 1.00 1.74 N ATOM 191 CA GLU 27 -0.207 35.782 23.731 1.00 1.74 C ATOM 192 CB GLU 27 0.974 34.851 24.048 1.00 1.74 C ATOM 193 CG GLU 27 1.604 35.148 25.409 1.00 1.74 C ATOM 194 CD GLU 27 2.507 33.982 25.786 1.00 1.74 C ATOM 195 OE1 GLU 27 3.527 33.763 25.078 1.00 1.74 O ATOM 196 OE2 GLU 27 2.186 33.294 26.788 1.00 1.74 O ATOM 197 C GLU 27 0.335 37.162 23.505 1.00 1.74 C ATOM 198 O GLU 27 0.336 37.986 24.418 1.00 1.74 O ATOM 199 N LEU 28 0.803 37.455 22.277 1.00 1.48 N ATOM 200 CA LEU 28 1.395 38.730 21.971 1.00 1.48 C ATOM 201 CB LEU 28 1.926 38.865 20.540 1.00 1.48 C ATOM 202 CG LEU 28 3.171 38.023 20.248 1.00 1.48 C ATOM 203 CD1 LEU 28 3.750 38.407 18.879 1.00 1.48 C ATOM 204 CD2 LEU 28 4.196 38.126 21.388 1.00 1.48 C ATOM 205 C LEU 28 0.367 39.801 22.119 1.00 1.48 C ATOM 206 O LEU 28 0.683 40.917 22.526 1.00 1.48 O ATOM 207 N ARG 29 -0.897 39.474 21.804 1.00 2.38 N ATOM 208 CA ARG 29 -1.999 40.396 21.859 1.00 2.38 C ATOM 209 CB ARG 29 -2.124 41.125 23.210 1.00 2.38 C ATOM 210 CG ARG 29 -3.429 41.918 23.339 1.00 2.38 C ATOM 211 CD ARG 29 -3.574 42.687 24.651 1.00 2.38 C ATOM 212 NE ARG 29 -4.789 43.545 24.528 1.00 2.38 N ATOM 213 CZ ARG 29 -5.186 44.345 25.562 1.00 2.38 C ATOM 214 NH1 ARG 29 -4.512 44.324 26.748 1.00 2.38 N ATOM 215 NH2 ARG 29 -6.248 45.188 25.400 1.00 2.38 N ATOM 216 C ARG 29 -1.927 41.417 20.757 1.00 2.38 C ATOM 217 O ARG 29 -2.286 42.579 20.941 1.00 2.38 O ATOM 218 N VAL 30 -1.452 41.006 19.564 1.00 2.01 N ATOM 219 CA VAL 30 -1.497 41.884 18.429 1.00 2.01 C ATOM 220 CB VAL 30 -0.149 42.122 17.806 1.00 2.01 C ATOM 221 CG1 VAL 30 0.695 42.918 18.814 1.00 2.01 C ATOM 222 CG2 VAL 30 0.490 40.773 17.429 1.00 2.01 C ATOM 223 C VAL 30 -2.396 41.247 17.410 1.00 2.01 C ATOM 224 O VAL 30 -2.125 40.161 16.899 1.00 2.01 O ATOM 225 N THR 31 -3.532 41.910 17.115 1.00 2.06 N ATOM 226 CA THR 31 -4.441 41.391 16.134 1.00 2.06 C ATOM 227 CB THR 31 -5.543 40.556 16.725 1.00 2.06 C ATOM 228 OG1 THR 31 -6.345 39.995 15.696 1.00 2.06 O ATOM 229 CG2 THR 31 -6.398 41.430 17.660 1.00 2.06 C ATOM 230 C THR 31 -5.066 42.566 15.463 1.00 2.06 C ATOM 231 O THR 31 -5.465 43.529 16.114 1.00 2.06 O ATOM 232 N GLU 32 -5.176 42.529 14.127 1.00 2.12 N ATOM 233 CA GLU 32 -5.775 43.664 13.497 1.00 2.12 C ATOM 234 CB GLU 32 -4.748 44.563 12.788 1.00 2.12 C ATOM 235 CG GLU 32 -5.332 45.874 12.262 1.00 2.12 C ATOM 236 CD GLU 32 -5.787 46.700 13.453 1.00 2.12 C ATOM 237 OE1 GLU 32 -6.768 46.274 14.124 1.00 2.12 O ATOM 238 OE2 GLU 32 -5.172 47.768 13.706 1.00 2.12 O ATOM 239 C GLU 32 -6.718 43.154 12.469 1.00 2.12 C ATOM 240 O GLU 32 -6.422 42.180 11.781 1.00 2.12 O ATOM 241 N ARG 33 -7.904 43.780 12.365 1.00 1.96 N ATOM 242 CA ARG 33 -8.808 43.405 11.320 1.00 1.96 C ATOM 243 CB ARG 33 -10.258 43.215 11.791 1.00 1.96 C ATOM 244 CG ARG 33 -10.459 41.957 12.637 1.00 1.96 C ATOM 245 CD ARG 33 -10.911 40.742 11.827 1.00 1.96 C ATOM 246 NE ARG 33 -9.706 40.101 11.226 1.00 1.96 N ATOM 247 CZ ARG 33 -9.284 40.470 9.982 1.00 1.96 C ATOM 248 NH1 ARG 33 -9.941 41.457 9.310 1.00 1.96 N ATOM 249 NH2 ARG 33 -8.208 39.852 9.409 1.00 1.96 N ATOM 250 C ARG 33 -8.779 44.552 10.367 1.00 1.96 C ATOM 251 O ARG 33 -9.400 45.588 10.596 1.00 1.96 O ATOM 252 N PRO 34 -8.036 44.386 9.310 1.00 2.50 N ATOM 253 CA PRO 34 -7.890 45.465 8.375 1.00 2.50 C ATOM 254 CD PRO 34 -6.815 43.600 9.395 1.00 2.50 C ATOM 255 CB PRO 34 -6.557 45.246 7.661 1.00 2.50 C ATOM 256 CG PRO 34 -5.742 44.384 8.629 1.00 2.50 C ATOM 257 C PRO 34 -8.995 45.518 7.379 1.00 2.50 C ATOM 258 O PRO 34 -9.756 44.560 7.260 1.00 2.50 O ATOM 259 N PHE 35 -9.098 46.645 6.655 1.00 1.45 N ATOM 260 CA PHE 35 -10.049 46.714 5.590 1.00 1.45 C ATOM 261 CB PHE 35 -11.152 47.764 5.776 1.00 1.45 C ATOM 262 CG PHE 35 -12.119 47.192 6.754 1.00 1.45 C ATOM 263 CD1 PHE 35 -11.975 47.399 8.107 1.00 1.45 C ATOM 264 CD2 PHE 35 -13.173 46.430 6.305 1.00 1.45 C ATOM 265 CE1 PHE 35 -12.876 46.861 8.998 1.00 1.45 C ATOM 266 CE2 PHE 35 -14.075 45.890 7.190 1.00 1.45 C ATOM 267 CZ PHE 35 -13.925 46.105 8.537 1.00 1.45 C ATOM 268 C PHE 35 -9.313 47.022 4.329 1.00 1.45 C ATOM 269 O PHE 35 -8.552 47.986 4.245 1.00 1.45 O ATOM 270 N TRP 36 -9.526 46.175 3.305 1.00 2.01 N ATOM 271 CA TRP 36 -8.863 46.373 2.053 1.00 2.01 C ATOM 272 CB TRP 36 -8.073 45.120 1.635 1.00 2.01 C ATOM 273 CG TRP 36 -7.337 45.218 0.323 1.00 2.01 C ATOM 274 CD2 TRP 36 -6.020 45.770 0.181 1.00 2.01 C ATOM 275 CD1 TRP 36 -7.726 44.815 -0.919 1.00 2.01 C ATOM 276 NE1 TRP 36 -6.730 45.075 -1.830 1.00 2.01 N ATOM 277 CE2 TRP 36 -5.677 45.664 -1.168 1.00 2.01 C ATOM 278 CE3 TRP 36 -5.169 46.316 1.095 1.00 2.01 C ATOM 279 CZ2 TRP 36 -4.468 46.104 -1.623 1.00 2.01 C ATOM 280 CZ3 TRP 36 -3.951 46.763 0.631 1.00 2.01 C ATOM 281 CH2 TRP 36 -3.610 46.658 -0.701 1.00 2.01 C ATOM 282 C TRP 36 -9.916 46.633 1.017 1.00 2.01 C ATOM 283 O TRP 36 -10.589 45.712 0.557 1.00 2.01 O ATOM 284 N ILE 37 -10.083 47.912 0.621 1.00 1.82 N ATOM 285 CA ILE 37 -11.069 48.227 -0.375 1.00 1.82 C ATOM 286 CB ILE 37 -12.307 48.862 0.183 1.00 1.82 C ATOM 287 CG1 ILE 37 -13.001 47.900 1.155 1.00 1.82 C ATOM 288 CG2 ILE 37 -13.202 49.287 -0.993 1.00 1.82 C ATOM 289 CD1 ILE 37 -13.429 46.587 0.501 1.00 1.82 C ATOM 290 C ILE 37 -10.473 49.213 -1.323 1.00 1.82 C ATOM 291 O ILE 37 -9.625 50.020 -0.948 1.00 1.82 O ATOM 292 N SER 38 -10.886 49.160 -2.603 1.00 1.14 N ATOM 293 CA SER 38 -10.383 50.142 -3.512 1.00 1.14 C ATOM 294 CB SER 38 -9.689 49.569 -4.759 1.00 1.14 C ATOM 295 OG SER 38 -10.632 48.906 -5.586 1.00 1.14 O ATOM 296 C SER 38 -11.559 50.929 -3.985 1.00 1.14 C ATOM 297 O SER 38 -12.606 50.366 -4.299 1.00 1.14 O ATOM 298 N SER 39 -11.418 52.267 -4.041 1.00 1.66 N ATOM 299 CA SER 39 -12.516 53.077 -4.484 1.00 1.66 C ATOM 300 CB SER 39 -12.992 54.099 -3.437 1.00 1.66 C ATOM 301 OG SER 39 -13.443 53.429 -2.270 1.00 1.66 O ATOM 302 C SER 39 -12.053 53.868 -5.662 1.00 1.66 C ATOM 303 O SER 39 -10.883 54.237 -5.757 1.00 1.66 O ATOM 304 N PHE 40 -12.965 54.145 -6.617 1.00 2.13 N ATOM 305 CA PHE 40 -12.482 54.920 -7.717 1.00 2.13 C ATOM 306 CB PHE 40 -12.339 54.162 -9.047 1.00 2.13 C ATOM 307 CG PHE 40 -11.707 55.219 -9.859 1.00 2.13 C ATOM 308 CD1 PHE 40 -10.498 55.720 -9.451 1.00 2.13 C ATOM 309 CD2 PHE 40 -12.310 55.740 -10.971 1.00 2.13 C ATOM 310 CE1 PHE 40 -9.885 56.720 -10.157 1.00 2.13 C ATOM 311 CE2 PHE 40 -11.675 56.738 -11.668 1.00 2.13 C ATOM 312 CZ PHE 40 -10.465 57.239 -11.278 1.00 2.13 C ATOM 313 C PHE 40 -13.329 56.137 -7.935 1.00 2.13 C ATOM 314 O PHE 40 -14.553 56.089 -7.830 1.00 2.13 O ATOM 315 N ILE 41 -12.663 57.281 -8.224 1.00 1.90 N ATOM 316 CA ILE 41 -13.344 58.512 -8.501 1.00 1.90 C ATOM 317 CB ILE 41 -12.879 59.653 -7.643 1.00 1.90 C ATOM 318 CG1 ILE 41 -13.170 59.372 -6.163 1.00 1.90 C ATOM 319 CG2 ILE 41 -13.532 60.944 -8.170 1.00 1.90 C ATOM 320 CD1 ILE 41 -14.660 59.223 -5.863 1.00 1.90 C ATOM 321 C ILE 41 -13.025 58.919 -9.905 1.00 1.90 C ATOM 322 O ILE 41 -11.892 59.298 -10.200 1.00 1.90 O ATOM 323 N GLY 42 -14.024 58.881 -10.811 1.00 0.97 N ATOM 324 CA GLY 42 -13.766 59.281 -12.165 1.00 0.97 C ATOM 325 C GLY 42 -13.906 58.073 -13.034 1.00 0.97 C ATOM 326 O GLY 42 -14.847 57.294 -12.890 1.00 0.97 O ATOM 327 N ARG 43 -12.954 57.892 -13.975 1.00 1.94 N ATOM 328 CA ARG 43 -12.994 56.761 -14.856 1.00 1.94 C ATOM 329 CB ARG 43 -12.725 57.130 -16.325 1.00 1.94 C ATOM 330 CG ARG 43 -12.822 55.943 -17.282 1.00 1.94 C ATOM 331 CD ARG 43 -12.639 56.337 -18.748 1.00 1.94 C ATOM 332 NE ARG 43 -12.777 55.100 -19.564 1.00 1.94 N ATOM 333 CZ ARG 43 -12.888 55.198 -20.920 1.00 1.94 C ATOM 334 NH1 ARG 43 -12.836 56.426 -21.513 1.00 1.94 N ATOM 335 NH2 ARG 43 -13.040 54.076 -21.681 1.00 1.94 N ATOM 336 C ARG 43 -11.941 55.794 -14.421 1.00 1.94 C ATOM 337 O ARG 43 -10.785 56.170 -14.208 1.00 1.94 O ATOM 338 N SER 44 -12.323 54.512 -14.249 1.00 1.71 N ATOM 339 CA SER 44 -11.370 53.556 -13.770 1.00 1.71 C ATOM 340 CB SER 44 -11.864 52.778 -12.538 1.00 1.71 C ATOM 341 OG SER 44 -10.881 51.843 -12.120 1.00 1.71 O ATOM 342 C SER 44 -11.091 52.563 -14.849 1.00 1.71 C ATOM 343 O SER 44 -11.987 51.880 -15.339 1.00 1.71 O ATOM 344 N LYS 45 -9.811 52.468 -15.239 1.00 1.71 N ATOM 345 CA LYS 45 -9.370 51.553 -16.245 1.00 1.71 C ATOM 346 CB LYS 45 -8.873 52.283 -17.504 1.00 1.71 C ATOM 347 CG LYS 45 -8.671 51.405 -18.737 1.00 1.71 C ATOM 348 CD LYS 45 -8.473 52.237 -20.005 1.00 1.71 C ATOM 349 CE LYS 45 -8.308 51.411 -21.283 1.00 1.71 C ATOM 350 NZ LYS 45 -8.052 52.312 -22.430 1.00 1.71 N ATOM 351 C LYS 45 -8.202 50.856 -15.630 1.00 1.71 C ATOM 352 O LYS 45 -7.395 51.485 -14.952 1.00 1.71 O TER 1817 LEU 249 END