####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS097_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS097_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 8 - 36 4.98 8.56 LCS_AVERAGE: 60.80 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 19 - 27 1.95 11.41 LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 1.80 11.79 LCS_AVERAGE: 14.57 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.73 12.48 LCS_AVERAGE: 10.49 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 6 25 3 4 6 7 8 8 10 13 18 20 23 27 29 33 35 37 38 39 39 40 LCS_GDT V 3 V 3 3 6 25 3 4 6 7 8 11 13 15 18 20 23 27 29 33 35 37 38 39 39 40 LCS_GDT Q 4 Q 4 3 6 25 3 4 6 7 9 11 13 15 18 20 21 24 27 32 34 37 38 39 39 40 LCS_GDT G 5 G 5 3 6 25 3 3 6 9 9 11 13 15 18 20 23 27 29 32 35 37 38 39 39 40 LCS_GDT P 6 P 6 3 6 25 1 4 5 7 7 8 10 14 18 20 22 27 29 32 35 37 38 39 39 40 LCS_GDT W 7 W 7 3 6 25 3 4 5 7 7 8 10 14 16 20 23 27 29 32 35 37 38 39 39 40 LCS_GDT V 8 V 8 5 6 29 3 4 5 7 8 12 14 17 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT G 9 G 9 5 6 29 3 4 5 7 8 12 14 17 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT S 10 S 10 5 6 29 3 4 5 6 8 12 14 17 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT S 11 S 11 5 6 29 3 4 5 6 8 12 14 17 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT Y 12 Y 12 5 6 29 3 4 5 6 8 12 14 17 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT V 13 V 13 3 6 29 3 3 4 5 6 7 9 13 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT A 14 A 14 4 5 29 3 4 4 5 7 12 14 17 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT E 15 E 15 4 5 29 3 4 4 4 5 5 6 9 15 16 21 26 29 33 35 37 38 39 39 40 LCS_GDT T 16 T 16 4 5 29 3 4 4 5 8 12 14 17 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT G 17 G 17 4 5 29 3 4 4 5 8 10 14 17 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT Q 18 Q 18 4 4 29 3 3 5 7 8 12 14 17 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT N 19 N 19 4 9 29 3 3 5 7 8 11 13 15 18 20 22 25 28 33 35 37 38 39 39 40 LCS_GDT W 20 W 20 8 9 29 7 7 8 9 9 11 12 14 16 19 19 23 26 28 34 37 38 39 39 40 LCS_GDT A 21 A 21 8 9 29 7 7 8 9 9 12 14 17 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT S 22 S 22 8 9 29 7 7 8 9 9 11 13 15 18 20 23 27 29 33 35 37 38 39 39 40 LCS_GDT L 23 L 23 8 9 29 7 7 8 9 9 12 14 17 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT A 24 A 24 8 9 29 7 7 8 9 9 11 13 15 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT A 25 A 25 8 9 29 7 7 8 9 9 11 13 15 18 20 23 27 29 33 35 37 38 39 39 40 LCS_GDT N 26 N 26 8 9 29 7 7 8 9 9 11 13 15 18 20 23 27 29 33 35 37 38 39 39 40 LCS_GDT E 27 E 27 8 9 29 2 4 8 9 9 11 13 15 16 20 21 23 28 33 35 37 38 39 39 40 LCS_GDT L 28 L 28 4 9 29 4 4 5 5 8 11 13 15 18 20 23 27 29 33 35 37 38 39 39 40 LCS_GDT R 29 R 29 4 5 29 4 4 5 5 7 8 11 15 18 20 23 27 29 33 35 37 38 39 39 40 LCS_GDT V 30 V 30 4 5 29 4 4 5 7 8 12 14 17 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT T 31 T 31 4 5 29 4 4 5 5 8 10 14 17 18 21 23 26 29 33 35 37 38 39 39 40 LCS_GDT E 32 E 32 3 5 29 3 4 5 7 8 12 14 17 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT R 33 R 33 3 5 29 2 3 3 4 8 12 14 17 18 21 23 26 29 33 35 37 38 39 39 40 LCS_GDT P 34 P 34 4 5 29 1 3 4 4 5 8 10 11 15 18 23 24 28 31 35 37 38 39 39 40 LCS_GDT F 35 F 35 4 6 29 3 3 4 5 6 12 12 17 18 21 23 24 28 33 35 37 38 39 39 40 LCS_GDT W 36 W 36 4 6 29 3 3 5 7 8 12 14 17 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT I 37 I 37 4 6 22 3 3 4 4 5 7 10 14 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT S 38 S 38 4 6 21 3 3 4 4 6 10 13 15 18 21 23 27 29 33 35 37 38 39 39 40 LCS_GDT S 39 S 39 4 6 21 3 3 4 4 6 8 10 13 18 20 23 26 28 33 35 37 38 39 39 40 LCS_GDT F 40 F 40 4 6 21 3 3 4 5 7 8 10 13 18 20 23 26 29 33 35 37 38 39 39 40 LCS_GDT I 41 I 41 4 6 21 3 4 4 5 6 6 9 11 13 15 18 18 21 24 29 32 33 34 37 40 LCS_GDT G 42 G 42 4 6 21 3 4 4 5 7 7 9 11 12 15 18 18 19 20 21 21 22 25 26 31 LCS_GDT R 43 R 43 4 6 21 3 4 4 5 7 7 8 10 12 15 18 18 19 20 21 21 22 25 26 27 LCS_GDT S 44 S 44 4 6 21 3 4 4 5 7 7 8 10 12 13 17 18 19 20 21 21 22 25 26 27 LCS_GDT K 45 K 45 3 6 17 0 3 4 5 7 7 8 10 11 13 14 16 16 19 19 19 21 25 26 27 LCS_AVERAGE LCS_A: 28.62 ( 10.49 14.57 60.80 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 7 8 9 9 12 14 17 18 21 23 27 29 33 35 37 38 39 39 40 GDT PERCENT_AT 15.91 15.91 18.18 20.45 20.45 27.27 31.82 38.64 40.91 47.73 52.27 61.36 65.91 75.00 79.55 84.09 86.36 88.64 88.64 90.91 GDT RMS_LOCAL 0.22 0.22 0.73 1.32 1.32 2.46 2.65 2.92 3.01 3.43 3.64 4.60 4.73 5.11 5.29 5.48 5.58 5.69 5.69 5.93 GDT RMS_ALL_AT 12.44 12.44 12.48 11.71 11.71 8.70 8.82 8.99 9.04 8.90 8.97 8.25 8.28 8.24 8.24 8.24 8.26 8.32 8.32 8.26 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 9.784 0 0.267 0.317 10.577 0.000 0.000 - LGA V 3 V 3 9.585 0 0.015 0.250 11.662 0.000 0.000 8.970 LGA Q 4 Q 4 12.901 0 0.696 1.441 15.720 0.000 0.000 15.720 LGA G 5 G 5 10.885 0 0.073 0.073 12.712 0.000 0.000 - LGA P 6 P 6 10.256 0 0.684 0.603 12.381 0.000 0.000 12.242 LGA W 7 W 7 9.137 0 0.463 0.971 15.699 0.000 0.000 15.699 LGA V 8 V 8 1.987 0 0.243 1.253 5.016 42.273 27.532 4.038 LGA G 9 G 9 2.424 0 0.307 0.307 2.584 35.455 35.455 - LGA S 10 S 10 3.037 0 0.116 0.186 4.193 22.727 16.970 4.024 LGA S 11 S 11 2.773 0 0.322 0.688 5.435 27.727 23.030 5.435 LGA Y 12 Y 12 3.119 0 0.104 0.281 3.986 16.818 15.909 3.532 LGA V 13 V 13 4.393 0 0.090 0.104 7.086 10.000 5.714 6.171 LGA A 14 A 14 3.166 0 0.571 0.571 4.056 18.636 16.000 - LGA E 15 E 15 7.245 0 0.024 1.460 13.338 0.000 0.000 12.190 LGA T 16 T 16 3.003 0 0.180 0.301 7.331 46.818 26.753 6.175 LGA G 17 G 17 3.486 0 0.265 0.265 4.746 25.909 25.909 - LGA Q 18 Q 18 1.656 0 0.630 1.441 6.600 41.818 19.192 6.600 LGA N 19 N 19 6.608 0 0.052 1.070 8.886 1.364 0.682 8.239 LGA W 20 W 20 7.419 0 0.596 0.590 17.935 2.727 0.779 17.935 LGA A 21 A 21 3.558 0 0.074 0.086 5.114 11.818 9.455 - LGA S 22 S 22 5.471 0 0.019 0.039 7.213 2.273 1.515 6.995 LGA L 23 L 23 1.945 0 0.059 1.371 4.938 24.545 16.818 4.938 LGA A 24 A 24 4.888 0 0.036 0.042 7.774 5.000 4.364 - LGA A 25 A 25 7.433 0 0.194 0.195 11.429 0.000 0.000 - LGA N 26 N 26 9.547 0 0.050 0.523 12.353 0.000 0.000 10.692 LGA E 27 E 27 11.064 0 0.107 1.057 13.280 0.000 0.000 11.946 LGA L 28 L 28 9.852 0 0.452 1.383 11.251 0.000 0.000 11.251 LGA R 29 R 29 8.949 0 0.311 1.336 20.066 0.000 0.000 19.788 LGA V 30 V 30 3.376 0 0.625 1.260 5.240 16.818 20.519 2.043 LGA T 31 T 31 3.702 0 0.349 0.287 6.126 14.545 8.312 5.928 LGA E 32 E 32 2.629 0 0.606 1.328 8.320 25.909 12.929 8.320 LGA R 33 R 33 1.912 0 0.068 1.237 13.734 26.818 10.248 13.734 LGA P 34 P 34 5.202 0 0.173 0.195 7.667 1.818 1.039 7.667 LGA F 35 F 35 3.784 0 0.667 1.289 5.037 12.273 7.107 4.913 LGA W 36 W 36 2.837 0 0.628 1.281 9.245 22.273 9.610 8.725 LGA I 37 I 37 5.291 0 0.637 1.243 10.436 3.182 1.591 10.436 LGA S 38 S 38 6.434 0 0.490 0.610 7.830 0.000 0.000 7.217 LGA S 39 S 39 7.581 0 0.062 0.111 9.473 0.000 0.000 5.397 LGA F 40 F 40 7.795 0 0.625 1.680 12.138 0.000 2.645 4.246 LGA I 41 I 41 12.448 0 0.035 0.089 15.059 0.000 0.000 11.302 LGA G 42 G 42 17.125 0 0.027 0.027 19.770 0.000 0.000 - LGA R 43 R 43 19.425 0 0.015 1.435 22.557 0.000 0.000 20.453 LGA S 44 S 44 21.764 0 0.702 0.755 24.833 0.000 0.000 24.833 LGA K 45 K 45 23.811 0 0.071 0.665 26.062 0.000 0.000 24.118 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.038 8.093 9.299 10.444 7.274 1.974 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 17 2.92 39.773 32.360 0.563 LGA_LOCAL RMSD: 2.919 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.991 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.038 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.508474 * X + 0.682482 * Y + -0.525046 * Z + -1.432359 Y_new = 0.387427 * X + -0.725877 * Y + -0.568334 * Z + 44.192268 Z_new = -0.768996 * X + 0.085566 * Y + -0.633501 * Z + -1.580728 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.651100 0.877269 3.007337 [DEG: 37.3053 50.2638 172.3077 ] ZXZ: -0.745828 2.256866 -1.459983 [DEG: -42.7328 129.3089 -83.6509 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS097_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS097_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 17 2.92 32.360 8.04 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS097_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 20 N ALA 2 4.843 40.314 20.177 1.00 2.80 ATOM 22 CA ALA 2 4.906 41.550 19.410 1.00 2.80 ATOM 24 CB ALA 2 6.311 42.103 19.565 1.00 2.80 ATOM 28 C ALA 2 4.499 41.311 17.942 1.00 2.80 ATOM 29 O ALA 2 5.321 40.911 17.114 1.00 2.80 ATOM 30 N VAL 3 3.245 41.637 17.615 1.00 2.31 ATOM 32 CA VAL 3 2.727 41.731 16.240 1.00 2.31 ATOM 34 CB VAL 3 1.662 40.657 15.970 1.00 2.31 ATOM 36 CG1 VAL 3 0.744 40.991 14.790 1.00 2.31 ATOM 40 CG2 VAL 3 2.373 39.333 15.669 1.00 2.31 ATOM 44 C VAL 3 2.216 43.136 15.986 1.00 2.31 ATOM 45 O VAL 3 1.498 43.714 16.804 1.00 2.31 ATOM 46 N GLN 4 2.626 43.704 14.853 1.00 1.77 ATOM 48 CA GLN 4 2.489 45.140 14.562 1.00 1.77 ATOM 50 CB GLN 4 3.476 45.923 15.441 1.00 1.77 ATOM 53 CG GLN 4 4.971 45.523 15.318 1.00 1.77 ATOM 56 CD GLN 4 5.259 44.222 16.010 1.00 1.77 ATOM 57 OE1 GLN 4 5.009 44.085 17.193 1.00 1.77 ATOM 58 NE2 GLN 4 5.730 43.206 15.315 1.00 1.77 ATOM 61 C GLN 4 2.729 45.552 13.109 1.00 1.77 ATOM 62 O GLN 4 2.229 46.589 12.689 1.00 1.77 ATOM 63 N GLY 5 3.493 44.774 12.337 1.00 0.92 ATOM 65 CA GLY 5 3.665 44.959 10.893 1.00 0.92 ATOM 68 C GLY 5 2.899 43.896 10.098 1.00 0.92 ATOM 69 O GLY 5 2.159 43.104 10.679 1.00 0.92 ATOM 70 N PRO 6 3.107 43.838 8.762 1.00 0.63 ATOM 71 CD PRO 6 3.922 44.761 7.985 1.00 0.63 ATOM 74 CG PRO 6 3.316 44.715 6.586 1.00 0.63 ATOM 77 CB PRO 6 2.855 43.261 6.458 1.00 0.63 ATOM 80 CA PRO 6 2.479 42.855 7.891 1.00 0.63 ATOM 82 C PRO 6 2.947 41.430 8.198 1.00 0.63 ATOM 83 O PRO 6 4.077 41.222 8.632 1.00 0.63 ATOM 84 N TRP 7 2.112 40.420 7.917 1.00 0.54 ATOM 86 CA TRP 7 2.447 39.009 8.117 1.00 0.54 ATOM 88 CB TRP 7 1.144 38.222 7.977 1.00 0.54 ATOM 91 CG TRP 7 1.192 36.736 8.196 1.00 0.54 ATOM 92 CD1 TRP 7 0.893 35.807 7.257 1.00 0.54 ATOM 94 NE1 TRP 7 0.991 34.546 7.818 1.00 0.54 ATOM 96 CE2 TRP 7 1.372 34.592 9.134 1.00 0.54 ATOM 97 CZ2 TRP 7 1.598 33.594 10.094 1.00 0.54 ATOM 99 CH2 TRP 7 1.987 33.975 11.388 1.00 0.54 ATOM 101 CZ3 TRP 7 2.185 35.338 11.673 1.00 0.54 ATOM 103 CE3 TRP 7 1.990 36.320 10.686 1.00 0.54 ATOM 105 CD2 TRP 7 1.533 35.973 9.403 1.00 0.54 ATOM 106 C TRP 7 3.564 38.513 7.162 1.00 0.54 ATOM 107 O TRP 7 4.041 39.246 6.299 1.00 0.54 ATOM 108 N VAL 8 3.981 37.256 7.312 1.00 0.60 ATOM 110 CA VAL 8 5.030 36.603 6.493 1.00 0.60 ATOM 112 CB VAL 8 6.022 35.822 7.380 1.00 0.60 ATOM 114 CG1 VAL 8 6.703 36.784 8.353 1.00 0.60 ATOM 118 CG2 VAL 8 5.353 34.679 8.156 1.00 0.60 ATOM 122 C VAL 8 4.480 35.757 5.339 1.00 0.60 ATOM 123 O VAL 8 5.180 34.930 4.774 1.00 0.60 ATOM 124 N GLY 9 3.200 35.932 4.997 1.00 0.63 ATOM 126 CA GLY 9 2.528 35.112 3.984 1.00 0.63 ATOM 129 C GLY 9 2.446 33.636 4.382 1.00 0.63 ATOM 130 O GLY 9 1.990 33.321 5.469 1.00 0.63 ATOM 131 N SER 10 2.863 32.726 3.510 1.00 0.77 ATOM 133 CA SER 10 2.931 31.280 3.789 1.00 0.77 ATOM 135 CB SER 10 2.561 30.506 2.517 1.00 0.77 ATOM 138 OG SER 10 3.481 30.810 1.497 1.00 0.77 ATOM 140 C SER 10 4.286 30.815 4.346 1.00 0.77 ATOM 141 O SER 10 4.447 29.644 4.695 1.00 0.77 ATOM 142 N SER 11 5.257 31.729 4.473 1.00 0.95 ATOM 144 CA SER 11 6.658 31.435 4.823 1.00 0.95 ATOM 146 CB SER 11 7.537 32.609 4.383 1.00 0.95 ATOM 149 OG SER 11 7.406 32.804 2.990 1.00 0.95 ATOM 151 C SER 11 6.919 31.070 6.307 1.00 0.95 ATOM 152 O SER 11 8.053 31.144 6.769 1.00 0.95 ATOM 153 N TYR 12 5.876 30.674 7.069 1.00 1.29 ATOM 155 CA TYR 12 5.965 30.406 8.514 1.00 1.29 ATOM 157 CB TYR 12 4.718 30.956 9.228 1.00 1.29 ATOM 160 CG TYR 12 3.404 30.393 8.739 1.00 1.29 ATOM 161 CD1 TYR 12 2.943 29.144 9.183 1.00 1.29 ATOM 163 CE1 TYR 12 1.702 28.655 8.741 1.00 1.29 ATOM 165 CZ TYR 12 0.915 29.424 7.867 1.00 1.29 ATOM 166 OH TYR 12 -0.298 28.953 7.464 1.00 1.29 ATOM 168 CE2 TYR 12 1.381 30.677 7.414 1.00 1.29 ATOM 170 CD2 TYR 12 2.628 31.157 7.844 1.00 1.29 ATOM 172 C TYR 12 6.252 28.961 8.926 1.00 1.29 ATOM 173 O TYR 12 6.612 28.744 10.069 1.00 1.29 ATOM 174 N VAL 13 6.163 27.959 8.036 1.00 1.67 ATOM 176 CA VAL 13 6.696 26.577 8.187 1.00 1.67 ATOM 178 CB VAL 13 8.238 26.563 8.042 1.00 1.67 ATOM 180 CG1 VAL 13 8.777 25.128 7.936 1.00 1.67 ATOM 184 CG2 VAL 13 8.714 27.304 6.793 1.00 1.67 ATOM 188 C VAL 13 6.250 25.738 9.420 1.00 1.67 ATOM 189 O VAL 13 5.658 24.677 9.236 1.00 1.67 ATOM 190 N ALA 14 6.581 26.139 10.648 1.00 1.63 ATOM 192 CA ALA 14 6.497 25.337 11.879 1.00 1.63 ATOM 194 CB ALA 14 7.728 25.644 12.730 1.00 1.63 ATOM 198 C ALA 14 5.185 25.520 12.676 1.00 1.63 ATOM 199 O ALA 14 4.417 26.467 12.463 1.00 1.63 ATOM 200 N GLU 15 4.953 24.632 13.649 1.00 1.87 ATOM 202 CA GLU 15 3.747 24.603 14.501 1.00 1.87 ATOM 204 CB GLU 15 3.878 23.566 15.639 1.00 1.87 ATOM 207 CG GLU 15 3.546 22.132 15.243 1.00 1.87 ATOM 210 CD GLU 15 4.527 21.544 14.231 1.00 1.87 ATOM 211 OE1 GLU 15 5.762 21.679 14.413 1.00 1.87 ATOM 212 OE2 GLU 15 4.074 20.933 13.245 1.00 1.87 ATOM 213 C GLU 15 3.438 25.924 15.197 1.00 1.87 ATOM 214 O GLU 15 2.276 26.281 15.336 1.00 1.87 ATOM 215 N THR 16 4.451 26.643 15.670 1.00 1.73 ATOM 217 CA THR 16 4.255 27.886 16.439 1.00 1.73 ATOM 219 CB THR 16 5.573 28.320 17.088 1.00 1.73 ATOM 221 CG2 THR 16 5.952 27.393 18.237 1.00 1.73 ATOM 225 OG1 THR 16 6.597 28.220 16.140 1.00 1.73 ATOM 227 C THR 16 3.690 29.000 15.560 1.00 1.73 ATOM 228 O THR 16 2.706 29.635 15.932 1.00 1.73 ATOM 229 N GLY 17 4.221 29.163 14.342 1.00 1.18 ATOM 231 CA GLY 17 3.632 30.031 13.311 1.00 1.18 ATOM 234 C GLY 17 2.243 29.556 12.882 1.00 1.18 ATOM 235 O GLY 17 1.306 30.361 12.811 1.00 1.18 ATOM 236 N GLN 18 2.063 28.248 12.689 1.00 1.13 ATOM 238 CA GLN 18 0.788 27.638 12.305 1.00 1.13 ATOM 240 CB GLN 18 1.047 26.131 12.069 1.00 1.13 ATOM 243 CG GLN 18 -0.175 25.293 11.671 1.00 1.13 ATOM 246 CD GLN 18 -0.728 25.688 10.307 1.00 1.13 ATOM 247 OE1 GLN 18 -0.364 25.138 9.283 1.00 1.13 ATOM 248 NE2 GLN 18 -1.611 26.655 10.250 1.00 1.13 ATOM 251 C GLN 18 -0.331 27.865 13.344 1.00 1.13 ATOM 252 O GLN 18 -1.456 28.165 12.934 1.00 1.13 ATOM 253 N ASN 19 -0.035 27.760 14.645 1.00 1.20 ATOM 255 CA ASN 19 -0.976 28.022 15.728 1.00 1.20 ATOM 257 CB ASN 19 -0.406 27.532 17.067 1.00 1.20 ATOM 260 CG ASN 19 -0.685 26.060 17.325 1.00 1.20 ATOM 261 OD1 ASN 19 -1.691 25.692 17.905 1.00 1.20 ATOM 262 ND2 ASN 19 0.196 25.185 16.907 1.00 1.20 ATOM 265 C ASN 19 -1.342 29.507 15.818 1.00 1.20 ATOM 266 O ASN 19 -2.516 29.831 16.011 1.00 1.20 ATOM 267 N TRP 20 -0.372 30.415 15.668 1.00 1.04 ATOM 269 CA TRP 20 -0.673 31.859 15.586 1.00 1.04 ATOM 271 CB TRP 20 0.605 32.681 15.414 1.00 1.04 ATOM 274 CG TRP 20 1.227 33.060 16.706 1.00 1.04 ATOM 275 CD1 TRP 20 2.444 32.685 17.139 1.00 1.04 ATOM 277 NE1 TRP 20 2.665 33.180 18.406 1.00 1.04 ATOM 279 CE2 TRP 20 1.578 33.906 18.860 1.00 1.04 ATOM 280 CZ2 TRP 20 1.304 34.562 20.062 1.00 1.04 ATOM 282 CH2 TRP 20 0.092 35.243 20.202 1.00 1.04 ATOM 284 CZ3 TRP 20 -0.822 35.265 19.141 1.00 1.04 ATOM 286 CE3 TRP 20 -0.554 34.576 17.943 1.00 1.04 ATOM 288 CD2 TRP 20 0.654 33.874 17.777 1.00 1.04 ATOM 289 C TRP 20 -1.615 32.158 14.424 1.00 1.04 ATOM 290 O TRP 20 -2.612 32.855 14.610 1.00 1.04 ATOM 291 N ALA 21 -1.319 31.609 13.251 1.00 0.82 ATOM 293 CA ALA 21 -2.082 31.866 12.043 1.00 0.82 ATOM 295 CB ALA 21 -1.293 31.285 10.868 1.00 0.82 ATOM 299 C ALA 21 -3.510 31.320 12.138 1.00 0.82 ATOM 300 O ALA 21 -4.449 32.038 11.814 1.00 0.82 ATOM 301 N SER 22 -3.717 30.111 12.653 1.00 1.13 ATOM 303 CA SER 22 -5.072 29.559 12.818 1.00 1.13 ATOM 305 CB SER 22 -5.009 28.049 13.062 1.00 1.13 ATOM 308 OG SER 22 -4.248 27.756 14.210 1.00 1.13 ATOM 310 C SER 22 -5.865 30.277 13.904 1.00 1.13 ATOM 311 O SER 22 -7.049 30.549 13.726 1.00 1.13 ATOM 312 N LEU 23 -5.225 30.693 15.005 1.00 1.27 ATOM 314 CA LEU 23 -5.882 31.441 16.079 1.00 1.27 ATOM 316 CB LEU 23 -4.939 31.410 17.298 1.00 1.27 ATOM 319 CG LEU 23 -5.579 31.820 18.629 1.00 1.27 ATOM 321 CD1 LEU 23 -6.686 30.872 19.071 1.00 1.27 ATOM 325 CD2 LEU 23 -4.517 31.791 19.732 1.00 1.27 ATOM 329 C LEU 23 -6.266 32.859 15.629 1.00 1.27 ATOM 330 O LEU 23 -7.384 33.298 15.878 1.00 1.27 ATOM 331 N ALA 24 -5.401 33.542 14.868 1.00 1.24 ATOM 333 CA ALA 24 -5.715 34.842 14.262 1.00 1.24 ATOM 335 CB ALA 24 -4.408 35.461 13.760 1.00 1.24 ATOM 339 C ALA 24 -6.782 34.741 13.154 1.00 1.24 ATOM 340 O ALA 24 -7.602 35.646 12.990 1.00 1.24 ATOM 341 N ALA 25 -6.850 33.614 12.437 1.00 1.60 ATOM 343 CA ALA 25 -7.850 33.362 11.377 1.00 1.60 ATOM 345 CB ALA 25 -7.291 32.290 10.439 1.00 1.60 ATOM 349 C ALA 25 -9.253 32.986 11.898 1.00 1.60 ATOM 350 O ALA 25 -10.186 32.951 11.094 1.00 1.60 ATOM 351 N ASN 26 -9.429 32.754 13.199 1.00 1.99 ATOM 353 CA ASN 26 -10.731 32.386 13.804 1.00 1.99 ATOM 355 CB ASN 26 -10.645 30.941 14.303 1.00 1.99 ATOM 358 CG ASN 26 -10.620 29.936 13.163 1.00 1.99 ATOM 359 OD1 ASN 26 -11.647 29.605 12.591 1.00 1.99 ATOM 360 ND2 ASN 26 -9.468 29.432 12.787 1.00 1.99 ATOM 363 C ASN 26 -11.157 33.294 14.968 1.00 1.99 ATOM 364 O ASN 26 -12.354 33.526 15.152 1.00 1.99 ATOM 365 N GLU 27 -10.203 33.789 15.770 1.00 2.12 ATOM 367 CA GLU 27 -10.499 34.291 17.128 1.00 2.12 ATOM 369 CB GLU 27 -9.994 33.213 18.102 1.00 2.12 ATOM 372 CG GLU 27 -10.366 33.436 19.568 1.00 2.12 ATOM 375 CD GLU 27 -11.866 33.157 19.814 1.00 2.12 ATOM 376 OE1 GLU 27 -12.232 31.991 20.090 1.00 2.12 ATOM 377 OE2 GLU 27 -12.682 34.103 19.737 1.00 2.12 ATOM 378 C GLU 27 -9.814 35.630 17.410 1.00 2.12 ATOM 379 O GLU 27 -10.444 36.570 17.910 1.00 2.12 ATOM 380 N LEU 28 -8.518 35.724 17.105 1.00 1.95 ATOM 382 CA LEU 28 -7.620 36.682 17.726 1.00 1.95 ATOM 384 CB LEU 28 -6.401 35.861 18.210 1.00 1.95 ATOM 387 CG LEU 28 -5.425 36.572 19.148 1.00 1.95 ATOM 389 CD1 LEU 28 -6.094 37.215 20.356 1.00 1.95 ATOM 393 CD2 LEU 28 -4.448 35.528 19.684 1.00 1.95 ATOM 397 C LEU 28 -7.315 37.851 16.788 1.00 1.95 ATOM 398 O LEU 28 -6.476 37.750 15.900 1.00 1.95 ATOM 399 N ARG 29 -8.025 38.967 16.959 1.00 1.86 ATOM 401 CA ARG 29 -7.995 40.110 16.019 1.00 1.86 ATOM 403 CB ARG 29 -9.175 41.058 16.289 1.00 1.86 ATOM 406 CG ARG 29 -10.524 40.344 16.090 1.00 1.86 ATOM 409 CD ARG 29 -11.696 41.307 16.308 1.00 1.86 ATOM 412 NE ARG 29 -11.757 42.307 15.224 1.00 1.86 ATOM 414 CZ ARG 29 -12.795 42.635 14.481 1.00 1.86 ATOM 415 NH1 ARG 29 -13.972 42.097 14.629 1.00 1.86 ATOM 418 NH2 ARG 29 -12.651 43.528 13.545 1.00 1.86 ATOM 421 C ARG 29 -6.692 40.911 16.036 1.00 1.86 ATOM 422 O ARG 29 -6.341 41.464 15.012 1.00 1.86 ATOM 423 N VAL 30 -6.008 40.931 17.188 1.00 1.87 ATOM 425 CA VAL 30 -4.692 41.532 17.515 1.00 1.87 ATOM 427 CB VAL 30 -3.540 40.616 17.035 1.00 1.87 ATOM 429 CG1 VAL 30 -3.213 40.678 15.540 1.00 1.87 ATOM 433 CG2 VAL 30 -2.251 40.899 17.796 1.00 1.87 ATOM 437 C VAL 30 -4.511 43.031 17.220 1.00 1.87 ATOM 438 O VAL 30 -4.113 43.774 18.118 1.00 1.87 ATOM 439 N THR 31 -4.830 43.498 16.009 1.00 1.37 ATOM 441 CA THR 31 -4.585 44.869 15.522 1.00 1.37 ATOM 443 CB THR 31 -3.324 44.877 14.644 1.00 1.37 ATOM 445 CG2 THR 31 -2.050 44.767 15.470 1.00 1.37 ATOM 449 OG1 THR 31 -3.282 43.767 13.774 1.00 1.37 ATOM 451 C THR 31 -5.796 45.436 14.786 1.00 1.37 ATOM 452 O THR 31 -5.706 45.868 13.646 1.00 1.37 ATOM 453 N GLU 32 -6.979 45.405 15.431 1.00 1.06 ATOM 455 CA GLU 32 -8.331 45.623 14.856 1.00 1.06 ATOM 457 CB GLU 32 -8.515 47.053 14.310 1.00 1.06 ATOM 460 CG GLU 32 -8.416 48.151 15.358 1.00 1.06 ATOM 463 CD GLU 32 -9.620 48.124 16.317 1.00 1.06 ATOM 464 OE1 GLU 32 -10.690 48.690 15.986 1.00 1.06 ATOM 465 OE2 GLU 32 -9.519 47.522 17.420 1.00 1.06 ATOM 466 C GLU 32 -8.753 44.593 13.810 1.00 1.06 ATOM 467 O GLU 32 -9.853 44.037 13.895 1.00 1.06 ATOM 468 N ARG 33 -7.869 44.266 12.865 1.00 0.76 ATOM 470 CA ARG 33 -7.935 43.093 11.983 1.00 0.76 ATOM 472 CB ARG 33 -8.524 43.494 10.612 1.00 0.76 ATOM 475 CG ARG 33 -7.679 44.546 9.868 1.00 0.76 ATOM 478 CD ARG 33 -8.382 44.945 8.577 1.00 0.76 ATOM 481 NE ARG 33 -7.600 45.952 7.846 1.00 0.76 ATOM 483 CZ ARG 33 -8.067 46.817 6.984 1.00 0.76 ATOM 484 NH1 ARG 33 -9.311 46.797 6.581 1.00 0.76 ATOM 487 NH2 ARG 33 -7.283 47.730 6.493 1.00 0.76 ATOM 490 C ARG 33 -6.531 42.498 11.858 1.00 0.76 ATOM 491 O ARG 33 -5.581 43.273 11.797 1.00 0.76 ATOM 492 N PRO 34 -6.361 41.173 11.770 1.00 0.66 ATOM 493 CD PRO 34 -7.407 40.145 11.744 1.00 0.66 ATOM 496 CG PRO 34 -6.709 38.828 12.063 1.00 0.66 ATOM 499 CB PRO 34 -5.286 39.058 11.546 1.00 0.66 ATOM 502 CA PRO 34 -5.046 40.545 11.843 1.00 0.66 ATOM 504 C PRO 34 -4.006 41.147 10.883 1.00 0.66 ATOM 505 O PRO 34 -4.227 41.184 9.676 1.00 0.66 ATOM 506 N PHE 35 -2.882 41.622 11.436 1.00 0.61 ATOM 508 CA PHE 35 -1.724 42.169 10.696 1.00 0.61 ATOM 510 CB PHE 35 -1.012 41.040 9.935 1.00 0.61 ATOM 513 CG PHE 35 -0.738 39.831 10.808 1.00 0.61 ATOM 514 CD1 PHE 35 0.428 39.780 11.592 1.00 0.61 ATOM 516 CE1 PHE 35 0.639 38.703 12.463 1.00 0.61 ATOM 518 CZ PHE 35 -0.310 37.671 12.564 1.00 0.61 ATOM 520 CE2 PHE 35 -1.462 37.706 11.768 1.00 0.61 ATOM 522 CD2 PHE 35 -1.678 38.777 10.890 1.00 0.61 ATOM 524 C PHE 35 -2.007 43.445 9.864 1.00 0.61 ATOM 525 O PHE 35 -1.151 43.898 9.111 1.00 0.61 ATOM 526 N TRP 36 -3.169 44.072 10.075 1.00 0.62 ATOM 528 CA TRP 36 -3.638 45.373 9.549 1.00 0.62 ATOM 530 CB TRP 36 -2.850 46.511 10.228 1.00 0.62 ATOM 533 CG TRP 36 -3.347 47.896 9.934 1.00 0.62 ATOM 534 CD1 TRP 36 -2.641 48.890 9.341 1.00 0.62 ATOM 536 NE1 TRP 36 -3.419 50.020 9.240 1.00 0.62 ATOM 538 CE2 TRP 36 -4.677 49.819 9.737 1.00 0.62 ATOM 539 CZ2 TRP 36 -5.809 50.638 9.830 1.00 0.62 ATOM 541 CH2 TRP 36 -6.971 50.127 10.430 1.00 0.62 ATOM 543 CZ3 TRP 36 -6.978 48.815 10.934 1.00 0.62 ATOM 545 CE3 TRP 36 -5.841 48.000 10.834 1.00 0.62 ATOM 547 CD2 TRP 36 -4.658 48.474 10.217 1.00 0.62 ATOM 548 C TRP 36 -3.753 45.554 8.030 1.00 0.62 ATOM 549 O TRP 36 -4.777 46.053 7.578 1.00 0.62 ATOM 550 N ILE 37 -2.756 45.156 7.214 1.00 0.57 ATOM 552 CA ILE 37 -2.763 45.321 5.745 1.00 0.57 ATOM 554 CB ILE 37 -1.790 46.441 5.276 1.00 0.57 ATOM 556 CG2 ILE 37 -2.108 47.757 6.001 1.00 0.57 ATOM 560 CG1 ILE 37 -0.298 46.087 5.446 1.00 0.57 ATOM 563 CD1 ILE 37 0.633 47.207 4.949 1.00 0.57 ATOM 567 C ILE 37 -2.527 44.007 4.992 1.00 0.57 ATOM 568 O ILE 37 -2.175 42.990 5.597 1.00 0.57 ATOM 569 N SER 38 -2.750 44.041 3.679 1.00 0.51 ATOM 571 CA SER 38 -2.771 42.943 2.708 1.00 0.51 ATOM 573 CB SER 38 -2.831 43.562 1.303 1.00 0.51 ATOM 576 OG SER 38 -3.808 44.575 1.219 1.00 0.51 ATOM 578 C SER 38 -1.583 41.963 2.792 1.00 0.51 ATOM 579 O SER 38 -0.625 42.085 2.031 1.00 0.51 ATOM 580 N SER 39 -1.647 40.990 3.703 1.00 0.52 ATOM 582 CA SER 39 -0.496 40.130 4.057 1.00 0.52 ATOM 584 CB SER 39 0.379 40.905 5.052 1.00 0.52 ATOM 587 OG SER 39 -0.296 41.119 6.287 1.00 0.52 ATOM 589 C SER 39 -0.851 38.783 4.691 1.00 0.52 ATOM 590 O SER 39 -0.061 37.839 4.646 1.00 0.52 ATOM 591 N PHE 40 -2.023 38.665 5.326 1.00 0.52 ATOM 593 CA PHE 40 -2.295 37.598 6.273 1.00 0.52 ATOM 595 CB PHE 40 -3.248 38.111 7.358 1.00 0.52 ATOM 598 CG PHE 40 -3.641 37.048 8.370 1.00 0.52 ATOM 599 CD1 PHE 40 -2.671 36.194 8.932 1.00 0.52 ATOM 601 CE1 PHE 40 -3.066 35.153 9.798 1.00 0.52 ATOM 603 CZ PHE 40 -4.411 35.003 10.133 1.00 0.52 ATOM 605 CE2 PHE 40 -5.384 35.888 9.624 1.00 0.52 ATOM 607 CD2 PHE 40 -4.986 36.901 8.733 1.00 0.52 ATOM 609 C PHE 40 -2.789 36.309 5.596 1.00 0.52 ATOM 610 O PHE 40 -3.780 36.324 4.857 1.00 0.52 ATOM 611 N ILE 41 -2.139 35.182 5.926 1.00 0.56 ATOM 613 CA ILE 41 -2.489 33.825 5.492 1.00 0.56 ATOM 615 CB ILE 41 -1.533 33.326 4.390 1.00 0.56 ATOM 617 CG2 ILE 41 -1.860 31.860 4.034 1.00 0.56 ATOM 621 CG1 ILE 41 -1.617 34.244 3.146 1.00 0.56 ATOM 624 CD1 ILE 41 -0.702 33.822 1.978 1.00 0.56 ATOM 628 C ILE 41 -2.459 32.909 6.715 1.00 0.56 ATOM 629 O ILE 41 -1.441 32.815 7.393 1.00 0.56 ATOM 630 N GLY 42 -3.556 32.194 6.956 1.00 0.79 ATOM 632 CA GLY 42 -3.695 31.198 8.027 1.00 0.79 ATOM 635 C GLY 42 -4.707 30.074 7.728 1.00 0.79 ATOM 636 O GLY 42 -4.853 29.164 8.539 1.00 0.79 ATOM 637 N ARG 43 -5.388 30.124 6.574 1.00 0.95 ATOM 639 CA ARG 43 -6.314 29.097 6.069 1.00 0.95 ATOM 641 CB ARG 43 -7.679 29.734 5.761 1.00 0.95 ATOM 644 CG ARG 43 -8.333 30.367 6.999 1.00 0.95 ATOM 647 CD ARG 43 -9.717 30.908 6.617 1.00 0.95 ATOM 650 NE ARG 43 -10.386 31.546 7.783 1.00 0.95 ATOM 652 CZ ARG 43 -11.516 32.227 7.730 1.00 0.95 ATOM 653 NH1 ARG 43 -12.198 32.379 6.628 1.00 0.95 ATOM 656 NH2 ARG 43 -12.012 32.770 8.807 1.00 0.95 ATOM 659 C ARG 43 -5.756 28.401 4.826 1.00 0.95 ATOM 660 O ARG 43 -4.920 28.966 4.116 1.00 0.95 ATOM 661 N SER 44 -6.238 27.197 4.538 1.00 1.50 ATOM 663 CA SER 44 -5.767 26.352 3.422 1.00 1.50 ATOM 665 CB SER 44 -5.960 24.878 3.800 1.00 1.50 ATOM 668 OG SER 44 -7.306 24.652 4.201 1.00 1.50 ATOM 670 C SER 44 -6.406 26.651 2.058 1.00 1.50 ATOM 671 O SER 44 -5.883 26.222 1.030 1.00 1.50 ATOM 672 N LYS 45 -7.513 27.423 2.014 1.00 1.08 ATOM 674 CA LYS 45 -8.129 27.923 0.766 1.00 1.08 ATOM 676 CB LYS 45 -9.628 28.190 0.963 1.00 1.08 ATOM 679 CG LYS 45 -10.503 26.948 0.799 1.00 1.08 ATOM 682 CD LYS 45 -11.958 27.420 0.634 1.00 1.08 ATOM 685 CE LYS 45 -12.909 26.268 0.309 1.00 1.08 ATOM 688 NZ LYS 45 -13.210 25.423 1.505 1.00 1.08 ATOM 692 C LYS 45 -7.514 29.228 0.270 1.00 1.08 ATOM 693 O LYS 45 -7.239 30.131 1.062 1.00 1.08 TER END