####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS086_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS086_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 37 3 - 39 4.86 8.16 LONGEST_CONTINUOUS_SEGMENT: 37 4 - 40 4.96 8.06 LCS_AVERAGE: 82.28 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 7 - 24 1.99 10.91 LCS_AVERAGE: 33.68 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 7 - 18 0.86 11.13 LONGEST_CONTINUOUS_SEGMENT: 12 19 - 30 0.85 8.11 LCS_AVERAGE: 20.25 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 36 0 3 3 6 7 7 10 10 11 13 15 15 17 22 23 25 25 31 34 36 LCS_GDT V 3 V 3 3 7 37 0 3 4 6 8 9 10 11 17 19 26 29 30 33 35 36 37 38 38 38 LCS_GDT Q 4 Q 4 5 7 37 2 5 5 6 11 13 13 18 23 25 26 29 32 34 35 36 37 38 38 38 LCS_GDT G 5 G 5 5 8 37 2 6 7 10 13 17 20 24 26 26 29 32 33 34 35 36 37 38 38 38 LCS_GDT P 6 P 6 5 15 37 3 5 5 9 13 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT W 7 W 7 12 18 37 7 11 11 13 16 18 20 24 26 26 29 32 33 34 35 36 37 38 38 38 LCS_GDT V 8 V 8 12 18 37 7 11 11 13 16 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT G 9 G 9 12 18 37 7 11 11 13 16 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT S 10 S 10 12 18 37 6 11 11 13 16 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT S 11 S 11 12 18 37 7 11 11 13 16 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT Y 12 Y 12 12 18 37 7 11 11 13 16 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT V 13 V 13 12 18 37 7 11 11 13 16 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT A 14 A 14 12 18 37 6 11 11 13 16 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT E 15 E 15 12 18 37 6 11 11 13 16 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT T 16 T 16 12 18 37 7 11 11 13 16 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT G 17 G 17 12 18 37 6 11 11 13 16 18 20 24 26 26 29 31 33 34 35 36 36 38 38 38 LCS_GDT Q 18 Q 18 12 18 37 0 3 6 12 14 17 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT N 19 N 19 12 18 37 5 10 12 13 15 17 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT W 20 W 20 12 18 37 5 10 12 13 16 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT A 21 A 21 12 18 37 5 10 12 13 16 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT S 22 S 22 12 18 37 5 10 12 13 16 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT L 23 L 23 12 18 37 5 10 12 13 16 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT A 24 A 24 12 18 37 6 10 12 13 16 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT A 25 A 25 12 17 37 6 10 12 13 15 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT N 26 N 26 12 17 37 6 10 12 13 15 17 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT E 27 E 27 12 17 37 6 10 12 13 15 17 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT L 28 L 28 12 17 37 6 10 12 13 15 17 20 24 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT R 29 R 29 12 17 37 6 9 12 13 15 17 19 22 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT V 30 V 30 12 17 37 5 9 12 13 15 17 19 22 26 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT T 31 T 31 9 17 37 3 6 10 13 15 17 19 22 24 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT E 32 E 32 6 17 37 3 5 6 6 9 13 15 20 24 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT R 33 R 33 6 17 37 3 6 10 13 15 17 19 22 24 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT P 34 P 34 6 17 37 3 5 7 8 15 17 19 22 24 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT F 35 F 35 6 17 37 3 4 10 13 15 17 19 22 24 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT W 36 W 36 6 17 37 4 5 10 13 15 17 19 21 24 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT I 37 I 37 6 17 37 4 5 8 13 15 17 19 22 24 27 29 32 33 34 35 36 37 38 38 38 LCS_GDT S 38 S 38 6 9 37 4 5 6 7 11 15 19 22 24 27 29 30 31 33 35 36 37 38 38 38 LCS_GDT S 39 S 39 6 9 37 4 5 6 7 9 9 15 21 23 27 29 30 30 31 32 34 37 38 38 38 LCS_GDT F 40 F 40 6 9 37 4 5 6 7 9 9 12 16 22 26 29 30 30 31 32 33 37 38 38 38 LCS_GDT I 41 I 41 6 9 35 4 4 6 7 9 9 12 16 22 24 27 30 30 31 32 32 32 33 36 36 LCS_GDT G 42 G 42 4 9 34 3 4 4 7 9 9 11 14 18 21 24 27 30 31 32 32 32 33 34 34 LCS_GDT R 43 R 43 4 9 34 3 4 6 7 9 9 11 12 14 16 21 23 25 29 32 32 32 33 34 34 LCS_GDT S 44 S 44 3 9 33 3 3 3 4 9 9 11 12 14 14 15 19 20 24 26 30 32 33 34 34 LCS_GDT K 45 K 45 3 3 15 2 3 3 3 3 5 6 7 9 10 11 13 16 18 18 18 21 22 23 26 LCS_AVERAGE LCS_A: 45.40 ( 20.25 33.68 82.28 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 11 12 13 16 18 20 24 26 27 29 32 33 34 35 36 37 38 38 38 GDT PERCENT_AT 15.91 25.00 27.27 29.55 36.36 40.91 45.45 54.55 59.09 61.36 65.91 72.73 75.00 77.27 79.55 81.82 84.09 86.36 86.36 86.36 GDT RMS_LOCAL 0.41 0.50 0.85 1.06 1.64 2.14 2.36 2.77 3.03 3.37 3.62 4.05 4.11 4.27 4.42 4.61 5.02 5.07 5.07 5.07 GDT RMS_ALL_AT 11.03 11.18 8.11 8.21 10.94 10.21 10.01 9.53 9.12 7.89 8.66 8.39 8.37 8.42 8.42 8.28 8.10 8.06 8.06 8.06 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 15.802 0 0.697 0.644 17.338 0.000 0.000 - LGA V 3 V 3 8.893 0 0.120 1.042 11.306 0.000 0.000 5.507 LGA Q 4 Q 4 7.269 0 0.696 0.952 11.737 0.000 0.000 11.601 LGA G 5 G 5 3.481 0 0.045 0.045 5.684 6.364 6.364 - LGA P 6 P 6 2.715 0 0.108 0.430 4.460 26.818 22.597 3.470 LGA W 7 W 7 3.448 0 0.412 1.218 14.712 26.364 7.532 14.712 LGA V 8 V 8 2.904 0 0.125 0.166 3.113 30.455 27.792 2.897 LGA G 9 G 9 2.116 0 0.031 0.031 2.483 44.545 44.545 - LGA S 10 S 10 2.409 0 0.140 0.657 3.255 48.182 41.515 2.314 LGA S 11 S 11 1.905 0 0.029 0.060 2.874 47.727 40.909 2.874 LGA Y 12 Y 12 1.896 0 0.091 1.152 7.984 47.727 21.212 7.984 LGA V 13 V 13 0.913 0 0.030 0.052 2.105 59.091 59.740 1.631 LGA A 14 A 14 2.308 0 0.010 0.010 3.706 31.818 33.091 - LGA E 15 E 15 3.662 0 0.031 0.652 6.244 13.636 7.273 6.244 LGA T 16 T 16 3.412 0 0.021 0.094 3.898 16.364 21.299 2.053 LGA G 17 G 17 3.630 0 0.561 0.561 3.630 16.364 16.364 - LGA Q 18 Q 18 3.908 0 0.337 1.371 8.999 8.636 3.838 8.999 LGA N 19 N 19 3.524 0 0.612 1.358 8.555 26.818 13.409 7.324 LGA W 20 W 20 2.004 0 0.045 0.895 7.648 44.545 27.273 7.415 LGA A 21 A 21 1.499 0 0.026 0.035 1.730 54.545 53.818 - LGA S 22 S 22 1.635 0 0.147 0.178 2.242 47.727 48.788 1.729 LGA L 23 L 23 1.766 0 0.091 0.119 2.564 48.636 42.045 2.564 LGA A 24 A 24 1.309 0 0.019 0.036 1.804 58.182 59.636 - LGA A 25 A 25 1.995 0 0.064 0.067 3.399 40.455 40.000 - LGA N 26 N 26 3.454 0 0.062 0.136 4.652 14.545 13.636 3.442 LGA E 27 E 27 3.496 0 0.101 1.005 4.492 13.182 10.303 4.492 LGA L 28 L 28 3.660 0 0.073 0.178 5.171 7.727 15.227 2.749 LGA R 29 R 29 6.101 0 0.100 1.385 7.333 0.000 5.124 3.440 LGA V 30 V 30 5.948 0 0.238 1.139 6.458 0.000 0.260 5.378 LGA T 31 T 31 9.129 0 0.717 1.027 13.393 0.000 0.000 11.454 LGA E 32 E 32 8.922 0 0.670 0.951 11.599 0.000 0.000 11.599 LGA R 33 R 33 9.970 0 0.084 1.102 12.966 0.000 0.000 12.966 LGA P 34 P 34 10.685 0 0.111 0.125 11.361 0.000 0.000 11.361 LGA F 35 F 35 10.711 0 0.208 0.896 11.330 0.000 0.000 8.386 LGA W 36 W 36 10.224 0 0.667 1.001 15.164 0.000 0.000 12.893 LGA I 37 I 37 10.384 0 0.014 0.316 12.347 0.000 0.000 9.702 LGA S 38 S 38 13.620 0 0.091 0.602 16.001 0.000 0.000 15.490 LGA S 39 S 39 15.072 0 0.184 0.719 17.025 0.000 0.000 14.013 LGA F 40 F 40 13.569 0 0.119 1.130 15.911 0.000 0.000 14.723 LGA I 41 I 41 17.231 0 0.562 0.561 20.925 0.000 0.000 17.407 LGA G 42 G 42 20.465 0 0.153 0.153 23.021 0.000 0.000 - LGA R 43 R 43 20.246 0 0.626 1.297 22.166 0.000 0.000 22.166 LGA S 44 S 44 20.086 0 0.723 0.654 23.301 0.000 0.000 17.912 LGA K 45 K 45 22.901 0 0.104 0.620 25.111 0.000 0.000 16.391 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.596 7.740 8.547 17.738 15.536 9.922 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 24 2.77 47.727 45.321 0.835 LGA_LOCAL RMSD: 2.774 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.526 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.596 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.220743 * X + -0.724633 * Y + 0.652824 * Z + -3.051908 Y_new = -0.340582 * X + -0.684470 * Y + -0.644597 * Z + 8.160357 Z_new = 0.913935 * X + -0.080050 * Y + -0.397889 * Z + 10.599358 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.995734 -1.152875 -2.943056 [DEG: -57.0513 -66.0549 -168.6247 ] ZXZ: 0.791739 1.980011 1.658162 [DEG: 45.3633 113.4463 95.0057 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS086_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS086_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 24 2.77 45.321 7.60 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS086_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 20 N ALA 2 -1.786 40.081 3.731 1.00 3.89 N ATOM 21 CA ALA 2 -2.075 40.737 5.009 1.00 3.89 C ATOM 22 C ALA 2 -0.850 40.994 5.890 1.00 3.89 C ATOM 23 O ALA 2 -0.962 41.606 6.959 1.00 3.89 O ATOM 24 CB ALA 2 -3.013 39.866 5.789 1.00 5.45 C ATOM 30 N VAL 3 0.309 40.516 5.449 1.00 3.89 N ATOM 31 CA VAL 3 1.543 40.559 6.230 1.00 3.89 C ATOM 32 C VAL 3 2.627 41.464 5.669 1.00 3.89 C ATOM 33 O VAL 3 2.560 41.930 4.534 1.00 3.89 O ATOM 34 CB VAL 3 2.129 39.137 6.362 1.00 5.45 C ATOM 35 CG1 VAL 3 1.177 38.253 7.071 1.00 5.45 C ATOM 36 CG2 VAL 3 2.419 38.536 4.971 1.00 5.45 C ATOM 46 N GLN 4 3.675 41.649 6.480 1.00 3.89 N ATOM 47 CA GLN 4 4.841 42.493 6.192 1.00 3.89 C ATOM 48 C GLN 4 5.620 42.050 4.935 1.00 3.89 C ATOM 49 O GLN 4 6.470 42.790 4.431 1.00 3.89 O ATOM 50 CB GLN 4 5.790 42.529 7.405 1.00 5.45 C ATOM 51 CG GLN 4 5.191 43.099 8.724 1.00 5.45 C ATOM 52 CD GLN 4 4.455 42.026 9.597 1.00 5.45 C ATOM 53 OE1 GLN 4 3.919 41.056 9.044 1.00 5.45 O ATOM 54 NE2 GLN 4 4.426 42.229 10.925 1.00 5.45 N ATOM 63 N GLY 5 5.387 40.824 4.484 1.00 3.89 N ATOM 64 CA GLY 5 6.023 40.290 3.293 1.00 3.89 C ATOM 65 C GLY 5 5.991 38.756 3.235 1.00 3.89 C ATOM 66 O GLY 5 5.733 38.100 4.248 1.00 3.89 O ATOM 70 N PRO 6 6.338 38.155 2.070 1.00 3.89 N ATOM 71 CA PRO 6 6.395 36.715 1.808 1.00 3.89 C ATOM 72 C PRO 6 7.185 35.950 2.858 1.00 3.89 C ATOM 73 O PRO 6 6.841 34.812 3.187 1.00 3.89 O ATOM 74 CB PRO 6 7.113 36.664 0.457 1.00 5.83 C ATOM 75 CG PRO 6 6.731 37.954 -0.224 1.00 5.83 C ATOM 76 CD PRO 6 6.703 38.987 0.886 1.00 5.83 C ATOM 84 N TRP 7 8.226 36.605 3.392 1.00 3.89 N ATOM 85 CA TRP 7 9.108 36.081 4.424 1.00 3.89 C ATOM 86 C TRP 7 8.411 35.862 5.759 1.00 3.89 C ATOM 87 O TRP 7 8.870 35.058 6.578 1.00 3.89 O ATOM 88 CB TRP 7 10.281 37.045 4.595 1.00 5.45 C ATOM 89 CG TRP 7 9.865 38.433 5.018 1.00 5.45 C ATOM 90 CD1 TRP 7 9.592 39.478 4.186 1.00 5.45 C ATOM 91 CD2 TRP 7 9.698 38.946 6.360 1.00 5.45 C ATOM 92 NE1 TRP 7 9.261 40.584 4.912 1.00 5.45 N ATOM 93 CE2 TRP 7 9.321 40.283 6.237 1.00 5.45 C ATOM 94 CE3 TRP 7 9.836 38.386 7.639 1.00 5.45 C ATOM 95 CZ2 TRP 7 9.079 41.075 7.334 1.00 5.45 C ATOM 96 CZ3 TRP 7 9.590 39.186 8.740 1.00 5.45 C ATOM 97 CH2 TRP 7 9.219 40.499 8.591 1.00 5.45 C ATOM 108 N VAL 8 7.296 36.560 5.978 1.00 3.89 N ATOM 109 CA VAL 8 6.529 36.417 7.194 1.00 3.89 C ATOM 110 C VAL 8 5.763 35.160 7.022 1.00 3.89 C ATOM 111 O VAL 8 5.717 34.308 7.904 1.00 3.89 O ATOM 112 CB VAL 8 5.500 37.535 7.398 1.00 5.45 C ATOM 113 CG1 VAL 8 4.648 37.242 8.629 1.00 5.45 C ATOM 114 CG2 VAL 8 6.168 38.806 7.539 1.00 5.45 C ATOM 124 N GLY 9 5.126 35.058 5.861 1.00 3.89 N ATOM 125 CA GLY 9 4.319 33.896 5.568 1.00 3.89 C ATOM 126 C GLY 9 5.152 32.636 5.703 1.00 3.89 C ATOM 127 O GLY 9 4.830 31.721 6.474 1.00 3.89 O ATOM 131 N SER 10 6.266 32.602 4.977 1.00 3.89 N ATOM 132 CA SER 10 7.132 31.441 4.979 1.00 3.89 C ATOM 133 C SER 10 7.663 31.084 6.361 1.00 3.89 C ATOM 134 O SER 10 7.512 29.938 6.806 1.00 3.89 O ATOM 135 CB SER 10 8.299 31.682 4.052 1.00 5.45 C ATOM 136 OG SER 10 9.159 30.576 4.026 1.00 5.45 O ATOM 142 N SER 11 8.253 32.051 7.071 1.00 3.89 N ATOM 143 CA SER 11 8.818 31.761 8.378 1.00 3.89 C ATOM 144 C SER 11 7.779 31.361 9.412 1.00 3.89 C ATOM 145 O SER 11 7.935 30.342 10.094 1.00 3.89 O ATOM 146 CB SER 11 9.578 32.967 8.885 1.00 5.45 C ATOM 147 OG SER 11 10.130 32.716 10.150 1.00 5.45 O ATOM 153 N TYR 12 6.706 32.148 9.533 1.00 3.89 N ATOM 154 CA TYR 12 5.703 31.892 10.540 1.00 3.89 C ATOM 155 C TYR 12 5.093 30.520 10.383 1.00 3.89 C ATOM 156 O TYR 12 5.002 29.756 11.351 1.00 3.89 O ATOM 157 CB TYR 12 4.608 32.940 10.487 1.00 5.45 C ATOM 158 CG TYR 12 3.592 32.733 11.543 1.00 5.45 C ATOM 159 CD1 TYR 12 3.879 33.169 12.814 1.00 5.45 C ATOM 160 CD2 TYR 12 2.394 32.111 11.277 1.00 5.45 C ATOM 161 CE1 TYR 12 2.991 33.012 13.813 1.00 5.45 C ATOM 162 CE2 TYR 12 1.501 31.937 12.294 1.00 5.45 C ATOM 163 CZ TYR 12 1.803 32.398 13.570 1.00 5.45 C ATOM 164 OH TYR 12 0.912 32.230 14.602 1.00 5.45 O ATOM 174 N VAL 13 4.638 30.197 9.179 1.00 3.89 N ATOM 175 CA VAL 13 4.004 28.918 8.974 1.00 3.89 C ATOM 176 C VAL 13 5.018 27.791 9.162 1.00 3.89 C ATOM 177 O VAL 13 4.700 26.776 9.778 1.00 3.89 O ATOM 178 CB VAL 13 3.307 28.859 7.622 1.00 5.45 C ATOM 179 CG1 VAL 13 2.760 27.443 7.375 1.00 5.45 C ATOM 180 CG2 VAL 13 2.187 29.907 7.598 1.00 5.45 C ATOM 190 N ALA 14 6.248 27.931 8.660 1.00 3.89 N ATOM 191 CA ALA 14 7.206 26.857 8.864 1.00 3.89 C ATOM 192 C ALA 14 7.392 26.539 10.355 1.00 3.89 C ATOM 193 O ALA 14 7.471 25.366 10.730 1.00 3.89 O ATOM 194 CB ALA 14 8.552 27.249 8.279 1.00 5.45 C ATOM 200 N GLU 15 7.417 27.579 11.204 1.00 3.89 N ATOM 201 CA GLU 15 7.571 27.409 12.649 1.00 3.89 C ATOM 202 C GLU 15 6.296 26.982 13.398 1.00 3.89 C ATOM 203 O GLU 15 6.374 26.215 14.363 1.00 3.89 O ATOM 204 CB GLU 15 8.092 28.709 13.267 1.00 5.45 C ATOM 205 CG GLU 15 9.531 29.076 12.882 1.00 5.45 C ATOM 206 CD GLU 15 10.552 28.096 13.400 1.00 5.45 C ATOM 207 OE1 GLU 15 10.472 27.750 14.553 1.00 5.45 O ATOM 208 OE2 GLU 15 11.408 27.693 12.650 1.00 5.45 O ATOM 215 N THR 16 5.123 27.464 12.968 1.00 3.89 N ATOM 216 CA THR 16 3.877 27.183 13.689 1.00 3.89 C ATOM 217 C THR 16 2.955 26.122 13.075 1.00 3.89 C ATOM 218 O THR 16 2.086 25.587 13.769 1.00 3.89 O ATOM 219 CB THR 16 3.077 28.477 13.881 1.00 5.45 C ATOM 220 OG1 THR 16 2.735 29.031 12.606 1.00 5.45 O ATOM 221 CG2 THR 16 3.862 29.491 14.676 1.00 5.45 C ATOM 229 N GLY 17 3.157 25.765 11.813 1.00 3.89 N ATOM 230 CA GLY 17 2.340 24.772 11.134 1.00 3.89 C ATOM 231 C GLY 17 0.864 25.124 10.960 1.00 3.89 C ATOM 232 O GLY 17 0.490 26.107 10.312 1.00 3.89 O ATOM 236 N GLN 18 0.008 24.289 11.538 1.00 3.89 N ATOM 237 CA GLN 18 -1.442 24.429 11.435 1.00 3.89 C ATOM 238 C GLN 18 -2.016 25.537 12.324 1.00 3.89 C ATOM 239 O GLN 18 -2.706 25.284 13.309 1.00 3.89 O ATOM 240 CB GLN 18 -2.068 23.081 11.810 1.00 5.45 C ATOM 241 CG GLN 18 -1.725 21.933 10.850 1.00 5.45 C ATOM 242 CD GLN 18 -2.260 20.524 11.277 1.00 5.45 C ATOM 243 OE1 GLN 18 -1.759 19.526 10.737 1.00 5.45 O ATOM 244 NE2 GLN 18 -3.224 20.442 12.198 1.00 5.45 N ATOM 253 N ASN 19 -1.747 26.780 11.937 1.00 3.89 N ATOM 254 CA ASN 19 -2.148 27.942 12.725 1.00 3.89 C ATOM 255 C ASN 19 -3.023 28.927 11.925 1.00 3.89 C ATOM 256 O ASN 19 -2.574 29.553 10.961 1.00 3.89 O ATOM 257 CB ASN 19 -0.920 28.613 13.322 1.00 5.45 C ATOM 258 CG ASN 19 -1.264 29.686 14.332 1.00 5.45 C ATOM 259 OD1 ASN 19 -2.432 30.053 14.495 1.00 5.45 O ATOM 260 ND2 ASN 19 -0.280 30.173 15.030 1.00 5.45 N ATOM 267 N TRP 20 -4.294 29.017 12.326 1.00 3.89 N ATOM 268 CA TRP 20 -5.316 29.851 11.675 1.00 3.89 C ATOM 269 C TRP 20 -4.954 31.330 11.666 1.00 3.89 C ATOM 270 O TRP 20 -4.441 31.858 12.654 1.00 3.89 O ATOM 271 CB TRP 20 -6.636 29.752 12.441 1.00 5.45 C ATOM 272 CG TRP 20 -7.378 28.477 12.334 1.00 5.45 C ATOM 273 CD1 TRP 20 -7.060 27.362 11.642 1.00 5.45 C ATOM 274 CD2 TRP 20 -8.624 28.204 12.976 1.00 5.45 C ATOM 275 NE1 TRP 20 -8.037 26.411 11.803 1.00 5.45 N ATOM 276 CE2 TRP 20 -8.992 26.905 12.621 1.00 5.45 C ATOM 277 CE3 TRP 20 -9.451 28.950 13.812 1.00 5.45 C ATOM 278 CZ2 TRP 20 -10.152 26.330 13.078 1.00 5.45 C ATOM 279 CZ3 TRP 20 -10.615 28.379 14.271 1.00 5.45 C ATOM 280 CH2 TRP 20 -10.960 27.099 13.917 1.00 5.45 C ATOM 291 N ALA 21 -5.280 32.025 10.570 1.00 3.89 N ATOM 292 CA ALA 21 -5.007 33.462 10.474 1.00 3.89 C ATOM 293 C ALA 21 -5.729 34.241 11.562 1.00 3.89 C ATOM 294 O ALA 21 -5.192 35.192 12.118 1.00 3.89 O ATOM 295 CB ALA 21 -5.428 34.008 9.143 1.00 5.45 C ATOM 301 N SER 22 -6.920 33.798 11.943 1.00 3.89 N ATOM 302 CA SER 22 -7.707 34.481 12.975 1.00 3.89 C ATOM 303 C SER 22 -7.025 34.505 14.347 1.00 3.89 C ATOM 304 O SER 22 -7.439 35.252 15.239 1.00 3.89 O ATOM 305 CB SER 22 -9.079 33.852 13.097 1.00 5.45 C ATOM 306 OG SER 22 -9.002 32.535 13.571 1.00 5.45 O ATOM 312 N LEU 23 -6.026 33.653 14.550 1.00 3.89 N ATOM 313 CA LEU 23 -5.301 33.620 15.804 1.00 3.89 C ATOM 314 C LEU 23 -3.900 34.208 15.572 1.00 3.89 C ATOM 315 O LEU 23 -3.441 35.106 16.297 1.00 3.89 O ATOM 316 CB LEU 23 -5.220 32.159 16.266 1.00 5.45 C ATOM 317 CG LEU 23 -6.609 31.442 16.492 1.00 5.45 C ATOM 318 CD1 LEU 23 -6.366 29.982 16.843 1.00 5.45 C ATOM 319 CD2 LEU 23 -7.409 32.138 17.591 1.00 5.45 C ATOM 331 N ALA 24 -3.267 33.725 14.503 1.00 3.89 N ATOM 332 CA ALA 24 -1.929 34.091 14.069 1.00 3.89 C ATOM 333 C ALA 24 -1.803 35.570 13.761 1.00 3.89 C ATOM 334 O ALA 24 -0.776 36.186 14.051 1.00 3.89 O ATOM 335 CB ALA 24 -1.602 33.302 12.847 1.00 5.45 C ATOM 341 N ALA 25 -2.859 36.171 13.229 1.00 3.89 N ATOM 342 CA ALA 25 -2.845 37.573 12.906 1.00 3.89 C ATOM 343 C ALA 25 -2.542 38.409 14.132 1.00 3.89 C ATOM 344 O ALA 25 -1.894 39.455 14.047 1.00 3.89 O ATOM 345 CB ALA 25 -4.161 38.004 12.292 1.00 5.45 C ATOM 351 N ASN 26 -2.983 37.967 15.316 1.00 3.89 N ATOM 352 CA ASN 26 -2.709 38.779 16.469 1.00 3.89 C ATOM 353 C ASN 26 -1.243 38.608 16.826 1.00 3.89 C ATOM 354 O ASN 26 -0.529 39.586 17.035 1.00 3.89 O ATOM 355 CB ASN 26 -3.618 38.370 17.597 1.00 5.45 C ATOM 356 CG ASN 26 -5.037 38.773 17.339 1.00 5.45 C ATOM 357 OD1 ASN 26 -5.334 39.747 16.633 1.00 5.45 O ATOM 358 ND2 ASN 26 -5.937 38.011 17.888 1.00 5.45 N ATOM 365 N GLU 27 -0.757 37.368 16.799 1.00 3.89 N ATOM 366 CA GLU 27 0.641 37.102 17.162 1.00 3.89 C ATOM 367 C GLU 27 1.624 37.890 16.288 1.00 3.89 C ATOM 368 O GLU 27 2.578 38.507 16.780 1.00 3.89 O ATOM 369 CB GLU 27 0.945 35.603 17.042 1.00 5.45 C ATOM 370 CG GLU 27 2.361 35.207 17.443 1.00 5.45 C ATOM 371 CD GLU 27 2.585 33.732 17.384 1.00 5.45 C ATOM 372 OE1 GLU 27 1.654 33.017 17.083 1.00 5.45 O ATOM 373 OE2 GLU 27 3.687 33.310 17.618 1.00 5.45 O ATOM 380 N LEU 28 1.336 37.924 14.994 1.00 3.89 N ATOM 381 CA LEU 28 2.148 38.605 13.992 1.00 3.89 C ATOM 382 C LEU 28 1.913 40.100 13.837 1.00 3.89 C ATOM 383 O LEU 28 2.634 40.753 13.069 1.00 3.89 O ATOM 384 CB LEU 28 1.871 37.970 12.627 1.00 5.45 C ATOM 385 CG LEU 28 2.347 36.580 12.334 1.00 5.45 C ATOM 386 CD1 LEU 28 1.727 36.131 10.994 1.00 5.45 C ATOM 387 CD2 LEU 28 3.864 36.624 12.226 1.00 5.45 C ATOM 399 N ARG 29 0.927 40.650 14.549 1.00 3.89 N ATOM 400 CA ARG 29 0.528 42.047 14.417 1.00 3.89 C ATOM 401 C ARG 29 0.181 42.390 12.951 1.00 3.89 C ATOM 402 O ARG 29 0.675 43.376 12.396 1.00 3.89 O ATOM 403 CB ARG 29 1.641 42.968 14.934 1.00 5.45 C ATOM 404 CG ARG 29 1.694 43.153 16.467 1.00 5.45 C ATOM 405 CD ARG 29 2.187 41.916 17.200 1.00 5.45 C ATOM 406 NE ARG 29 2.404 42.190 18.620 1.00 5.45 N ATOM 407 CZ ARG 29 2.720 41.280 19.584 1.00 5.45 C ATOM 408 NH1 ARG 29 2.861 39.987 19.318 1.00 5.45 N ATOM 409 NH2 ARG 29 2.888 41.704 20.830 1.00 5.45 N ATOM 423 N VAL 30 -0.661 41.548 12.329 1.00 3.89 N ATOM 424 CA VAL 30 -1.077 41.683 10.923 1.00 3.89 C ATOM 425 C VAL 30 -2.589 41.608 10.722 1.00 3.89 C ATOM 426 O VAL 30 -3.345 41.400 11.672 1.00 3.89 O ATOM 427 CB VAL 30 -0.390 40.618 10.045 1.00 5.45 C ATOM 428 CG1 VAL 30 1.089 40.801 10.114 1.00 5.45 C ATOM 429 CG2 VAL 30 -0.791 39.278 10.483 1.00 5.45 C ATOM 439 N THR 31 -3.025 41.825 9.487 1.00 3.89 N ATOM 440 CA THR 31 -4.432 41.717 9.138 1.00 3.89 C ATOM 441 C THR 31 -4.748 40.219 8.985 1.00 3.89 C ATOM 442 O THR 31 -3.846 39.422 8.763 1.00 3.89 O ATOM 443 CB THR 31 -4.745 42.575 7.873 1.00 5.45 C ATOM 444 OG1 THR 31 -4.485 43.956 8.166 1.00 5.45 O ATOM 445 CG2 THR 31 -6.191 42.437 7.434 1.00 5.45 C ATOM 453 N GLU 32 -5.983 39.801 9.249 1.00 3.89 N ATOM 454 CA GLU 32 -6.362 38.389 9.094 1.00 3.89 C ATOM 455 C GLU 32 -6.325 37.859 7.650 1.00 3.89 C ATOM 456 O GLU 32 -6.095 36.667 7.423 1.00 3.89 O ATOM 457 CB GLU 32 -7.756 38.153 9.675 1.00 5.45 C ATOM 458 CG GLU 32 -7.827 38.283 11.188 1.00 5.45 C ATOM 459 CD GLU 32 -9.220 38.072 11.758 1.00 5.45 C ATOM 460 OE1 GLU 32 -10.139 37.796 11.007 1.00 5.45 O ATOM 461 OE2 GLU 32 -9.368 38.203 12.947 1.00 5.45 O ATOM 468 N ARG 33 -6.645 38.712 6.678 1.00 3.89 N ATOM 469 CA ARG 33 -6.717 38.280 5.291 1.00 3.89 C ATOM 470 C ARG 33 -6.239 39.369 4.319 1.00 3.89 C ATOM 471 O ARG 33 -6.413 40.551 4.618 1.00 3.89 O ATOM 472 CB ARG 33 -8.156 37.934 4.981 1.00 5.45 C ATOM 473 CG ARG 33 -9.133 39.146 5.004 1.00 5.45 C ATOM 474 CD ARG 33 -10.553 38.716 4.857 1.00 5.45 C ATOM 475 NE ARG 33 -11.492 39.835 4.691 1.00 5.45 N ATOM 476 CZ ARG 33 -12.120 40.504 5.686 1.00 5.45 C ATOM 477 NH1 ARG 33 -11.898 40.198 6.958 1.00 5.45 N ATOM 478 NH2 ARG 33 -12.989 41.451 5.372 1.00 5.45 N ATOM 492 N PRO 34 -5.682 39.019 3.132 1.00 3.89 N ATOM 493 CA PRO 34 -5.339 37.716 2.530 1.00 3.89 C ATOM 494 C PRO 34 -4.365 36.875 3.369 1.00 3.89 C ATOM 495 O PRO 34 -3.395 37.394 3.935 1.00 3.89 O ATOM 496 CB PRO 34 -4.696 38.134 1.207 1.00 5.83 C ATOM 497 CG PRO 34 -5.269 39.493 0.908 1.00 5.83 C ATOM 498 CD PRO 34 -5.406 40.150 2.252 1.00 5.83 C ATOM 506 N PHE 35 -4.608 35.564 3.391 1.00 3.89 N ATOM 507 CA PHE 35 -3.834 34.636 4.212 1.00 3.89 C ATOM 508 C PHE 35 -2.492 34.227 3.615 1.00 3.89 C ATOM 509 O PHE 35 -2.404 33.499 2.617 1.00 3.89 O ATOM 510 CB PHE 35 -4.688 33.404 4.512 1.00 5.45 C ATOM 511 CG PHE 35 -4.168 32.402 5.586 1.00 5.45 C ATOM 512 CD1 PHE 35 -3.191 32.728 6.538 1.00 5.45 C ATOM 513 CD2 PHE 35 -4.743 31.141 5.677 1.00 5.45 C ATOM 514 CE1 PHE 35 -2.807 31.825 7.512 1.00 5.45 C ATOM 515 CE2 PHE 35 -4.352 30.250 6.659 1.00 5.45 C ATOM 516 CZ PHE 35 -3.383 30.596 7.575 1.00 5.45 C ATOM 526 N TRP 36 -1.452 34.661 4.312 1.00 3.89 N ATOM 527 CA TRP 36 -0.034 34.527 4.002 1.00 3.89 C ATOM 528 C TRP 36 0.485 33.103 3.885 1.00 3.89 C ATOM 529 O TRP 36 1.598 32.878 3.390 1.00 3.89 O ATOM 530 CB TRP 36 0.726 35.238 5.094 1.00 5.45 C ATOM 531 CG TRP 36 0.376 34.736 6.484 1.00 5.45 C ATOM 532 CD1 TRP 36 0.922 33.696 7.175 1.00 5.45 C ATOM 533 CD2 TRP 36 -0.648 35.271 7.346 1.00 5.45 C ATOM 534 NE1 TRP 36 0.338 33.584 8.390 1.00 5.45 N ATOM 535 CE2 TRP 36 -0.616 34.538 8.511 1.00 5.45 C ATOM 536 CE3 TRP 36 -1.581 36.304 7.221 1.00 5.45 C ATOM 537 CZ2 TRP 36 -1.445 34.796 9.529 1.00 5.45 C ATOM 538 CZ3 TRP 36 -2.427 36.546 8.262 1.00 5.45 C ATOM 539 CH2 TRP 36 -2.356 35.817 9.393 1.00 5.45 C ATOM 550 N ILE 37 -0.349 32.141 4.260 1.00 3.89 N ATOM 551 CA ILE 37 -0.012 30.735 4.144 1.00 3.89 C ATOM 552 C ILE 37 0.265 30.418 2.688 1.00 3.89 C ATOM 553 O ILE 37 0.986 29.467 2.398 1.00 3.89 O ATOM 554 CB ILE 37 -1.134 29.831 4.686 1.00 5.45 C ATOM 555 CG1 ILE 37 -0.583 28.411 4.929 1.00 5.45 C ATOM 556 CG2 ILE 37 -2.332 29.791 3.686 1.00 5.45 C ATOM 557 CD1 ILE 37 -1.476 27.524 5.777 1.00 5.45 C ATOM 569 N SER 38 -0.318 31.205 1.774 1.00 3.89 N ATOM 570 CA SER 38 -0.114 31.047 0.351 1.00 3.89 C ATOM 571 C SER 38 1.370 31.184 -0.006 1.00 3.89 C ATOM 572 O SER 38 1.863 30.465 -0.885 1.00 3.89 O ATOM 573 CB SER 38 -0.925 32.078 -0.401 1.00 5.45 C ATOM 574 OG SER 38 -0.763 31.943 -1.783 1.00 5.45 O ATOM 580 N SER 39 2.077 32.144 0.634 1.00 3.89 N ATOM 581 CA SER 39 3.491 32.387 0.362 1.00 3.89 C ATOM 582 C SER 39 4.296 31.191 0.846 1.00 3.89 C ATOM 583 O SER 39 5.196 30.702 0.149 1.00 3.89 O ATOM 584 CB SER 39 3.962 33.646 1.076 1.00 5.45 C ATOM 585 OG SER 39 3.324 34.793 0.571 1.00 5.45 O ATOM 591 N PHE 40 3.937 30.700 2.037 1.00 3.89 N ATOM 592 CA PHE 40 4.605 29.531 2.593 1.00 3.89 C ATOM 593 C PHE 40 4.470 28.357 1.672 1.00 3.89 C ATOM 594 O PHE 40 5.461 27.717 1.320 1.00 3.89 O ATOM 595 CB PHE 40 4.040 29.112 3.945 1.00 5.45 C ATOM 596 CG PHE 40 4.583 27.758 4.403 1.00 5.45 C ATOM 597 CD1 PHE 40 5.824 27.612 4.990 1.00 5.45 C ATOM 598 CD2 PHE 40 3.820 26.607 4.219 1.00 5.45 C ATOM 599 CE1 PHE 40 6.276 26.376 5.374 1.00 5.45 C ATOM 600 CE2 PHE 40 4.286 25.378 4.607 1.00 5.45 C ATOM 601 CZ PHE 40 5.512 25.267 5.186 1.00 5.45 C ATOM 611 N ILE 41 3.242 28.076 1.262 1.00 3.89 N ATOM 612 CA ILE 41 2.997 26.931 0.427 1.00 3.89 C ATOM 613 C ILE 41 3.730 27.086 -0.889 1.00 3.89 C ATOM 614 O ILE 41 4.483 26.199 -1.285 1.00 3.89 O ATOM 615 CB ILE 41 1.493 26.743 0.185 1.00 5.45 C ATOM 616 CG1 ILE 41 0.801 26.361 1.512 1.00 5.45 C ATOM 617 CG2 ILE 41 1.280 25.644 -0.855 1.00 5.45 C ATOM 618 CD1 ILE 41 -0.715 26.461 1.500 1.00 5.45 C ATOM 630 N GLY 42 3.625 28.256 -1.530 1.00 3.89 N ATOM 631 CA GLY 42 4.291 28.448 -2.807 1.00 3.89 C ATOM 632 C GLY 42 5.783 28.109 -2.752 1.00 3.89 C ATOM 633 O GLY 42 6.340 27.616 -3.738 1.00 3.89 O ATOM 637 N ARG 43 6.444 28.372 -1.620 1.00 3.89 N ATOM 638 CA ARG 43 7.854 28.044 -1.506 1.00 3.89 C ATOM 639 C ARG 43 8.141 26.616 -0.983 1.00 3.89 C ATOM 640 O ARG 43 9.090 25.974 -1.442 1.00 3.89 O ATOM 641 CB ARG 43 8.543 29.065 -0.614 1.00 5.45 C ATOM 642 CG ARG 43 8.621 30.461 -1.230 1.00 5.45 C ATOM 643 CD ARG 43 9.307 31.451 -0.358 1.00 5.45 C ATOM 644 NE ARG 43 9.349 32.771 -0.998 1.00 5.45 N ATOM 645 CZ ARG 43 10.006 33.863 -0.538 1.00 5.45 C ATOM 646 NH1 ARG 43 10.711 33.813 0.574 1.00 5.45 N ATOM 647 NH2 ARG 43 9.945 34.993 -1.227 1.00 5.45 N ATOM 661 N SER 44 7.341 26.122 -0.024 1.00 3.89 N ATOM 662 CA SER 44 7.597 24.832 0.627 1.00 3.89 C ATOM 663 C SER 44 6.823 23.571 0.185 1.00 3.89 C ATOM 664 O SER 44 7.302 22.462 0.446 1.00 3.89 O ATOM 665 CB SER 44 7.361 24.985 2.119 1.00 5.45 C ATOM 666 OG SER 44 8.289 25.863 2.711 1.00 5.45 O ATOM 672 N LYS 45 5.636 23.683 -0.427 1.00 3.89 N ATOM 673 CA LYS 45 4.878 22.458 -0.731 1.00 3.89 C ATOM 674 C LYS 45 3.769 22.614 -1.777 1.00 3.89 C ATOM 675 O LYS 45 3.473 23.703 -2.258 1.00 3.89 O ATOM 676 CB LYS 45 4.255 21.865 0.544 1.00 5.45 C ATOM 677 CG LYS 45 3.194 22.716 1.221 1.00 5.45 C ATOM 678 CD LYS 45 2.656 22.010 2.455 1.00 5.45 C ATOM 679 CE LYS 45 1.481 22.754 3.071 1.00 5.45 C ATOM 680 NZ LYS 45 0.926 22.030 4.254 1.00 5.45 N TER 3519 END