####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS068_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS068_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 21 - 41 4.91 12.59 LONGEST_CONTINUOUS_SEGMENT: 21 22 - 42 4.92 12.33 LCS_AVERAGE: 43.13 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 31 - 38 1.99 12.20 LCS_AVERAGE: 14.57 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 6 - 10 0.55 13.40 LONGEST_CONTINUOUS_SEGMENT: 5 14 - 18 0.90 20.49 LONGEST_CONTINUOUS_SEGMENT: 5 34 - 38 0.99 13.31 LCS_AVERAGE: 9.25 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 10 3 3 3 3 3 3 4 4 8 9 9 11 14 18 21 25 26 29 32 34 LCS_GDT V 3 V 3 3 5 10 3 3 3 5 5 5 5 5 8 9 9 9 9 9 12 14 15 23 24 27 LCS_GDT Q 4 Q 4 4 5 11 3 3 4 5 5 5 6 7 8 10 11 16 20 24 26 28 30 31 33 34 LCS_GDT G 5 G 5 4 6 18 2 3 4 5 5 5 7 7 9 12 13 16 22 23 26 28 30 31 33 34 LCS_GDT P 6 P 6 5 6 18 3 5 5 5 5 6 7 9 13 14 15 16 20 21 24 25 28 30 32 33 LCS_GDT W 7 W 7 5 6 18 4 5 5 5 6 7 9 10 13 15 19 21 23 24 26 28 30 31 33 34 LCS_GDT V 8 V 8 5 6 18 4 5 5 5 7 7 9 10 13 15 19 21 23 24 26 28 30 31 33 34 LCS_GDT G 9 G 9 5 6 18 4 5 5 6 7 8 9 10 13 15 19 21 23 24 26 28 30 31 33 34 LCS_GDT S 10 S 10 5 6 18 4 5 5 5 5 6 8 10 13 14 19 21 23 24 26 28 30 31 33 34 LCS_GDT S 11 S 11 3 6 18 3 4 4 5 6 9 9 10 13 14 15 17 20 23 26 28 30 31 33 34 LCS_GDT Y 12 Y 12 4 7 18 3 4 4 5 6 9 9 10 13 14 15 17 20 22 26 28 30 31 33 34 LCS_GDT V 13 V 13 4 7 18 3 4 4 5 6 9 9 10 13 14 15 17 20 22 25 28 30 31 33 34 LCS_GDT A 14 A 14 5 7 18 3 3 5 5 6 9 9 10 13 14 15 16 17 17 17 20 22 25 28 32 LCS_GDT E 15 E 15 5 7 18 3 4 5 5 6 9 9 10 13 14 15 16 17 17 18 20 21 25 26 29 LCS_GDT T 16 T 16 5 7 18 3 4 5 5 6 9 9 10 13 14 15 16 17 17 18 20 21 26 26 29 LCS_GDT G 17 G 17 5 7 18 3 4 5 5 6 9 9 10 13 14 15 16 17 17 20 24 24 27 29 32 LCS_GDT Q 18 Q 18 5 7 18 3 4 5 5 6 9 9 10 13 14 15 16 20 21 22 26 29 30 32 33 LCS_GDT N 19 N 19 4 7 18 3 4 4 5 6 9 9 10 13 14 15 17 20 23 26 28 30 31 33 34 LCS_GDT W 20 W 20 3 6 18 3 3 4 5 6 8 9 10 13 15 19 21 23 24 26 28 30 31 33 34 LCS_GDT A 21 A 21 3 6 21 3 3 4 5 6 8 9 10 13 15 19 21 23 24 26 28 30 31 33 34 LCS_GDT S 22 S 22 3 4 21 3 3 5 6 7 8 10 12 13 16 19 21 23 24 26 28 30 31 33 34 LCS_GDT L 23 L 23 3 4 21 3 3 4 5 6 8 10 12 13 16 17 18 23 24 26 28 30 31 33 34 LCS_GDT A 24 A 24 3 4 21 3 3 5 6 7 8 10 11 13 16 19 21 23 24 26 28 30 31 33 34 LCS_GDT A 25 A 25 4 5 21 3 3 4 4 6 8 10 12 13 15 17 18 22 24 26 28 30 31 33 34 LCS_GDT N 26 N 26 4 5 21 3 3 4 4 5 5 6 7 8 10 11 13 18 21 25 28 29 31 33 34 LCS_GDT E 27 E 27 4 6 21 3 3 4 4 6 8 9 10 11 13 15 16 19 23 26 28 28 31 33 34 LCS_GDT L 28 L 28 4 6 21 3 4 5 6 7 8 9 10 13 16 19 21 23 24 26 28 30 31 33 34 LCS_GDT R 29 R 29 4 6 21 3 4 5 6 7 8 9 10 13 16 19 21 23 24 26 28 30 31 33 34 LCS_GDT V 30 V 30 4 6 21 3 4 5 6 7 9 9 11 13 16 19 21 23 24 26 28 30 31 33 34 LCS_GDT T 31 T 31 4 8 21 3 4 5 6 7 9 10 11 13 16 19 21 23 24 26 28 30 31 33 34 LCS_GDT E 32 E 32 4 8 21 3 4 5 6 7 9 10 11 13 15 16 18 20 23 25 26 27 30 32 33 LCS_GDT R 33 R 33 3 8 21 3 3 5 6 7 9 10 11 13 16 19 21 23 24 26 28 30 31 33 34 LCS_GDT P 34 P 34 5 8 21 3 4 5 6 8 11 11 12 13 16 19 21 23 24 26 28 30 31 33 34 LCS_GDT F 35 F 35 5 8 21 3 4 5 6 9 11 11 12 13 16 19 21 23 24 26 28 30 31 33 34 LCS_GDT W 36 W 36 5 8 21 3 4 5 6 9 11 11 12 13 16 19 21 23 24 26 28 30 31 33 34 LCS_GDT I 37 I 37 5 8 21 3 4 5 6 9 11 11 12 13 16 19 21 23 24 26 28 30 31 33 34 LCS_GDT S 38 S 38 5 8 21 3 4 5 6 9 11 11 12 13 16 17 20 23 24 26 28 30 31 33 34 LCS_GDT S 39 S 39 4 7 21 4 5 5 5 8 11 11 12 13 16 19 21 23 24 26 28 30 31 33 34 LCS_GDT F 40 F 40 4 7 21 4 5 5 6 9 11 11 12 13 16 19 21 23 24 26 28 30 31 33 34 LCS_GDT I 41 I 41 4 7 21 4 5 5 6 9 11 11 12 13 16 19 21 23 24 26 28 30 31 33 34 LCS_GDT G 42 G 42 4 7 21 4 5 5 6 9 11 11 12 13 14 19 21 23 24 26 28 30 31 33 34 LCS_GDT R 43 R 43 3 7 18 3 3 3 5 7 9 10 12 13 14 14 16 20 23 26 28 30 31 33 34 LCS_GDT S 44 S 44 3 7 18 3 5 5 6 9 11 11 12 13 14 14 14 17 19 20 23 28 30 31 33 LCS_GDT K 45 K 45 3 7 18 0 3 3 6 9 11 11 12 13 14 14 14 17 18 20 22 28 30 31 32 LCS_AVERAGE LCS_A: 22.31 ( 9.25 14.57 43.13 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 5 6 9 11 11 12 13 16 19 21 23 24 26 28 30 31 33 34 GDT PERCENT_AT 9.09 11.36 11.36 13.64 20.45 25.00 25.00 27.27 29.55 36.36 43.18 47.73 52.27 54.55 59.09 63.64 68.18 70.45 75.00 77.27 GDT RMS_LOCAL 0.29 0.55 0.55 1.16 2.15 2.35 2.35 2.54 2.95 3.78 4.43 4.60 4.83 4.95 5.36 5.67 6.07 6.20 6.48 6.72 GDT RMS_ALL_AT 16.43 13.40 13.40 12.99 15.64 15.59 15.59 15.71 12.40 12.19 10.42 10.23 10.34 10.38 10.22 10.27 9.30 9.49 9.35 9.21 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 14.427 0 0.621 0.603 16.381 0.000 0.000 - LGA V 3 V 3 16.629 0 0.619 1.336 18.067 0.000 0.000 18.067 LGA Q 4 Q 4 16.021 0 0.631 0.506 17.119 0.000 0.000 15.117 LGA G 5 G 5 20.165 0 0.043 0.043 21.773 0.000 0.000 - LGA P 6 P 6 24.825 0 0.704 0.582 27.391 0.000 0.000 27.289 LGA W 7 W 7 22.647 0 0.319 0.951 30.754 0.000 0.000 30.754 LGA V 8 V 8 16.788 0 0.119 0.184 18.761 0.000 0.000 13.424 LGA G 9 G 9 16.023 0 0.556 0.556 16.621 0.000 0.000 - LGA S 10 S 10 19.848 0 0.651 0.872 23.559 0.000 0.000 23.559 LGA S 11 S 11 19.888 0 0.606 0.872 19.888 0.000 0.000 18.598 LGA Y 12 Y 12 19.828 0 0.234 1.304 21.059 0.000 0.000 20.607 LGA V 13 V 13 21.616 0 0.558 1.394 22.827 0.000 0.000 22.275 LGA A 14 A 14 26.562 0 0.417 0.398 27.156 0.000 0.000 - LGA E 15 E 15 26.193 0 0.106 0.673 26.779 0.000 0.000 24.771 LGA T 16 T 16 26.357 0 0.065 0.070 26.562 0.000 0.000 25.916 LGA G 17 G 17 26.006 0 0.035 0.035 26.107 0.000 0.000 - LGA Q 18 Q 18 25.042 0 0.595 0.979 27.908 0.000 0.000 27.908 LGA N 19 N 19 24.510 0 0.612 1.101 26.217 0.000 0.000 26.132 LGA W 20 W 20 19.078 0 0.467 1.195 23.326 0.000 0.000 23.326 LGA A 21 A 21 17.006 0 0.593 0.551 18.021 0.000 0.000 - LGA S 22 S 22 11.818 0 0.610 0.695 14.036 0.000 0.000 11.404 LGA L 23 L 23 13.684 0 0.659 0.587 16.952 0.000 0.000 16.952 LGA A 24 A 24 13.126 0 0.588 0.559 14.353 0.000 0.000 - LGA A 25 A 25 9.643 0 0.553 0.563 10.555 0.000 0.000 - LGA N 26 N 26 14.172 0 0.615 0.613 18.889 0.000 0.000 17.740 LGA E 27 E 27 16.045 0 0.343 1.300 23.008 0.000 0.000 21.626 LGA L 28 L 28 10.853 0 0.564 0.592 12.235 0.000 0.000 6.617 LGA R 29 R 29 12.933 0 0.437 1.491 18.442 0.000 0.000 18.150 LGA V 30 V 30 9.003 0 0.036 0.125 10.366 0.000 0.000 7.864 LGA T 31 T 31 10.776 0 0.691 0.601 14.318 0.000 0.000 12.763 LGA E 32 E 32 9.579 0 0.616 0.928 16.299 0.000 0.000 15.606 LGA R 33 R 33 6.967 0 0.614 1.364 18.803 0.455 0.165 18.803 LGA P 34 P 34 3.007 0 0.061 0.088 3.754 18.636 20.260 3.074 LGA F 35 F 35 2.700 0 0.120 1.156 7.021 35.909 16.860 6.798 LGA W 36 W 36 2.523 0 0.059 0.177 3.543 25.000 26.883 2.088 LGA I 37 I 37 2.579 0 0.622 1.448 5.106 30.455 17.955 4.582 LGA S 38 S 38 1.700 0 0.182 0.683 2.463 48.182 46.970 2.088 LGA S 39 S 39 2.780 0 0.663 0.809 6.761 45.455 30.606 6.761 LGA F 40 F 40 2.009 0 0.057 0.632 6.200 45.455 23.636 5.972 LGA I 41 I 41 2.138 0 0.024 0.072 3.919 44.545 31.591 3.919 LGA G 42 G 42 1.780 0 0.655 0.655 3.315 39.545 39.545 - LGA R 43 R 43 3.894 0 0.083 1.056 10.559 33.182 12.066 9.809 LGA S 44 S 44 1.879 0 0.603 0.588 3.963 40.455 31.818 3.963 LGA K 45 K 45 2.610 0 0.649 1.250 6.843 23.636 10.909 6.843 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.761 8.597 9.516 9.793 7.029 3.377 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.54 28.977 25.781 0.455 LGA_LOCAL RMSD: 2.537 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.710 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.761 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.100509 * X + 0.986691 * Y + 0.127824 * Z + -54.396175 Y_new = 0.387315 * X + -0.079538 * Y + 0.918510 * Z + 101.715477 Z_new = 0.916453 * X + 0.141826 * Y + -0.374166 * Z + -47.317425 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.824697 -1.159123 2.779279 [DEG: 104.5474 -66.4129 159.2410 ] ZXZ: 3.003316 1.954293 1.417259 [DEG: 172.0773 111.9728 81.2029 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS068_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS068_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.54 25.781 8.76 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS068_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT 4PEU ATOM 1923 N ALA 2 5.269 33.194 26.070 1.00 3.88 ATOM 1925 CA ALA 2 5.824 34.242 26.894 1.00 3.88 ATOM 1926 CB ALA 2 5.426 34.120 28.374 1.00 3.88 ATOM 1927 C ALA 2 7.331 34.225 26.817 1.00 3.88 ATOM 1928 O ALA 2 7.959 35.285 26.813 1.00 3.88 ATOM 1929 N VAL 3 7.925 33.007 26.722 1.00 3.88 ATOM 1931 CA VAL 3 9.350 32.796 26.620 1.00 3.88 ATOM 1932 CB VAL 3 9.722 31.326 26.808 1.00 3.88 ATOM 1933 CG1 VAL 3 9.211 30.440 25.648 1.00 3.88 ATOM 1934 CG2 VAL 3 11.233 31.210 27.079 1.00 3.88 ATOM 1935 C VAL 3 9.884 33.377 25.322 1.00 3.88 ATOM 1936 O VAL 3 10.985 33.929 25.307 1.00 3.88 ATOM 1937 N GLN 4 9.089 33.294 24.222 1.00 4.12 ATOM 1939 CA GLN 4 9.447 33.808 22.917 1.00 4.12 ATOM 1940 CB GLN 4 8.403 33.477 21.837 1.00 4.12 ATOM 1941 CG GLN 4 8.300 32.002 21.431 1.00 4.12 ATOM 1942 CD GLN 4 7.116 31.799 20.473 1.00 4.12 ATOM 1943 OE1 GLN 4 6.244 32.644 20.260 1.00 4.12 ATOM 1944 NE2 GLN 4 7.084 30.594 19.849 1.00 4.12 ATOM 1947 C GLN 4 9.507 35.311 22.990 1.00 4.12 ATOM 1948 O GLN 4 10.366 35.927 22.356 1.00 4.12 ATOM 1949 N GLY 5 8.592 35.922 23.773 1.00 4.13 ATOM 1951 CA GLY 5 8.557 37.343 23.975 1.00 4.13 ATOM 1952 C GLY 5 7.215 37.727 24.533 1.00 4.13 ATOM 1953 O GLY 5 6.243 36.988 24.345 1.00 4.13 ATOM 1954 N PRO 6 7.111 38.862 25.224 1.00 3.95 ATOM 1955 CA PRO 6 5.857 39.335 25.763 1.00 3.95 ATOM 1956 CB PRO 6 6.205 40.418 26.782 1.00 3.95 ATOM 1957 CG PRO 6 7.608 40.899 26.379 1.00 3.95 ATOM 1958 CD PRO 6 8.233 39.717 25.612 1.00 3.95 ATOM 1959 C PRO 6 4.985 39.769 24.622 1.00 3.95 ATOM 1960 O PRO 6 5.510 40.342 23.660 1.00 3.95 ATOM 1961 N TRP 7 3.666 39.483 24.718 1.00 3.59 ATOM 1963 CA TRP 7 2.883 39.174 23.549 1.00 3.59 ATOM 1964 CB TRP 7 1.474 38.668 23.892 1.00 3.59 ATOM 1965 CG TRP 7 1.429 37.281 24.502 1.00 3.59 ATOM 1966 CD1 TRP 7 2.437 36.388 24.753 1.00 3.59 ATOM 1967 NE1 TRP 7 1.930 35.235 25.305 1.00 3.59 ATOM 1969 CE2 TRP 7 0.569 35.380 25.439 1.00 3.59 ATOM 1970 CZ2 TRP 7 -0.399 34.524 25.947 1.00 3.59 ATOM 1971 CH2 TRP 7 -1.729 34.962 25.959 1.00 3.59 ATOM 1972 CZ3 TRP 7 -2.073 36.234 25.477 1.00 3.59 ATOM 1973 CE3 TRP 7 -1.096 37.094 24.969 1.00 3.59 ATOM 1974 CD2 TRP 7 0.220 36.655 24.951 1.00 3.59 ATOM 1975 C TRP 7 2.788 40.362 22.662 1.00 3.59 ATOM 1976 O TRP 7 2.377 41.437 23.095 1.00 3.59 ATOM 1977 N VAL 8 3.219 40.168 21.397 1.00 3.47 ATOM 1979 CA VAL 8 3.235 41.239 20.446 1.00 3.47 ATOM 1980 CB VAL 8 4.348 41.078 19.428 1.00 3.47 ATOM 1981 CG1 VAL 8 4.305 42.231 18.412 1.00 3.47 ATOM 1982 CG2 VAL 8 5.709 40.912 20.123 1.00 3.47 ATOM 1983 C VAL 8 1.922 41.251 19.721 1.00 3.47 ATOM 1984 O VAL 8 1.295 42.304 19.620 1.00 3.47 ATOM 1985 N GLY 9 1.469 40.075 19.230 1.00 3.62 ATOM 1987 CA GLY 9 0.239 40.027 18.506 1.00 3.62 ATOM 1988 C GLY 9 -0.764 39.217 19.238 1.00 3.62 ATOM 1989 O GLY 9 -0.793 37.996 19.091 1.00 3.62 ATOM 1990 N SER 10 -1.615 39.886 20.039 1.00 3.82 ATOM 1992 CA SER 10 -2.651 39.193 20.747 1.00 3.82 ATOM 1993 CB SER 10 -2.385 38.999 22.252 1.00 3.82 ATOM 1994 OG SER 10 -3.462 38.324 22.891 1.00 3.82 ATOM 1996 C SER 10 -3.893 40.001 20.580 1.00 3.82 ATOM 1997 O SER 10 -3.919 41.197 20.868 1.00 3.82 ATOM 1998 N SER 11 -4.939 39.346 20.054 1.00 3.98 ATOM 2000 CA SER 11 -6.212 39.954 19.862 1.00 3.98 ATOM 2001 CB SER 11 -6.878 39.702 18.512 1.00 3.98 ATOM 2002 OG SER 11 -6.184 40.380 17.484 1.00 3.98 ATOM 2004 C SER 11 -7.130 39.459 20.915 1.00 3.98 ATOM 2005 O SER 11 -7.372 38.257 21.069 1.00 3.98 ATOM 2006 N TYR 12 -7.657 40.457 21.641 1.00 4.35 ATOM 2008 CA TYR 12 -8.597 40.351 22.721 1.00 4.35 ATOM 2009 CB TYR 12 -8.262 41.343 23.861 1.00 4.35 ATOM 2010 CG TYR 12 -6.901 41.081 24.419 1.00 4.35 ATOM 2011 CD1 TYR 12 -5.838 41.910 24.042 1.00 4.35 ATOM 2012 CE1 TYR 12 -4.555 41.695 24.546 1.00 4.35 ATOM 2013 CZ TYR 12 -4.319 40.645 25.435 1.00 4.35 ATOM 2014 OH TYR 12 -3.021 40.427 25.945 1.00 4.35 ATOM 2016 CE2 TYR 12 -5.373 39.812 25.818 1.00 4.35 ATOM 2017 CD2 TYR 12 -6.659 40.029 25.313 1.00 4.35 ATOM 2018 C TYR 12 -9.931 40.785 22.129 1.00 4.35 ATOM 2019 O TYR 12 -10.894 41.050 22.849 1.00 4.35 ATOM 2020 N VAL 13 -9.999 40.874 20.777 1.00 4.93 ATOM 2022 CA VAL 13 -11.126 41.279 19.994 1.00 4.93 ATOM 2023 CB VAL 13 -10.861 41.339 18.497 1.00 4.93 ATOM 2024 CG1 VAL 13 -9.803 42.396 18.200 1.00 4.93 ATOM 2025 CG2 VAL 13 -10.426 39.954 17.976 1.00 4.93 ATOM 2026 C VAL 13 -12.334 40.443 20.181 1.00 4.93 ATOM 2027 O VAL 13 -12.272 39.290 20.610 1.00 4.93 ATOM 2028 N ALA 14 -13.476 41.098 19.909 1.00 5.51 ATOM 2030 CA ALA 14 -14.771 40.515 19.947 1.00 5.51 ATOM 2031 CB ALA 14 -14.983 39.647 18.690 1.00 5.51 ATOM 2032 C ALA 14 -15.189 39.825 21.224 1.00 5.51 ATOM 2033 O ALA 14 -15.753 38.730 21.205 1.00 5.51 ATOM 2034 N GLU 15 -14.901 40.465 22.382 1.00 6.11 ATOM 2036 CA GLU 15 -15.307 39.959 23.673 1.00 6.11 ATOM 2037 CB GLU 15 -14.618 40.673 24.852 1.00 6.11 ATOM 2038 CG GLU 15 -13.139 40.306 25.049 1.00 6.11 ATOM 2039 CD GLU 15 -12.968 38.824 25.385 1.00 6.11 ATOM 2040 OE1 GLU 15 -12.221 38.133 24.646 1.00 6.11 ATOM 2041 OE2 GLU 15 -13.555 38.367 26.402 1.00 6.11 ATOM 2042 C GLU 15 -16.792 40.219 23.732 1.00 6.11 ATOM 2043 O GLU 15 -17.566 39.318 24.056 1.00 6.11 ATOM 2044 N THR 16 -17.210 41.465 23.391 1.00 6.45 ATOM 2046 CA THR 16 -18.605 41.842 23.316 1.00 6.45 ATOM 2047 CB THR 16 -18.853 43.269 23.747 1.00 6.45 ATOM 2048 CG2 THR 16 -18.505 43.414 25.239 1.00 6.45 ATOM 2049 OG1 THR 16 -18.112 44.187 22.945 1.00 6.45 ATOM 2051 C THR 16 -19.054 41.684 21.878 1.00 6.45 ATOM 2052 O THR 16 -20.249 41.700 21.575 1.00 6.45 ATOM 2053 N GLY 17 -18.074 41.494 20.966 1.00 6.36 ATOM 2055 CA GLY 17 -18.271 41.341 19.555 1.00 6.36 ATOM 2056 C GLY 17 -18.234 42.675 18.878 1.00 6.36 ATOM 2057 O GLY 17 -18.468 42.735 17.670 1.00 6.36 ATOM 2058 N GLN 18 -17.980 43.750 19.665 1.00 6.04 ATOM 2060 CA GLN 18 -17.902 45.106 19.213 1.00 6.04 ATOM 2061 CB GLN 18 -18.625 46.086 20.159 1.00 6.04 ATOM 2062 CG GLN 18 -20.133 45.889 20.322 1.00 6.04 ATOM 2063 CD GLN 18 -20.634 46.968 21.273 1.00 6.04 ATOM 2064 OE1 GLN 18 -20.953 48.082 20.862 1.00 6.04 ATOM 2065 NE2 GLN 18 -20.709 46.634 22.590 1.00 6.04 ATOM 2068 C GLN 18 -16.468 45.536 19.258 1.00 6.04 ATOM 2069 O GLN 18 -15.978 46.124 18.296 1.00 6.04 ATOM 2070 N ASN 19 -15.765 45.206 20.374 1.00 5.71 ATOM 2072 CA ASN 19 -14.398 45.593 20.614 1.00 5.71 ATOM 2073 CB ASN 19 -13.896 45.323 22.055 1.00 5.71 ATOM 2074 CG ASN 19 -13.902 43.853 22.413 1.00 5.71 ATOM 2075 OD1 ASN 19 -14.959 43.227 22.426 1.00 5.71 ATOM 2076 ND2 ASN 19 -12.692 43.290 22.676 1.00 5.71 ATOM 2079 C ASN 19 -13.369 45.103 19.642 1.00 5.71 ATOM 2080 O ASN 19 -13.376 43.953 19.203 1.00 5.71 ATOM 2081 N TRP 20 -12.447 46.037 19.334 1.00 5.54 ATOM 2083 CA TRP 20 -11.341 45.918 18.425 1.00 5.54 ATOM 2084 CB TRP 20 -11.322 47.085 17.406 1.00 5.54 ATOM 2085 CG TRP 20 -12.456 47.051 16.415 1.00 5.54 ATOM 2086 CD1 TRP 20 -12.493 46.343 15.258 1.00 5.54 ATOM 2087 NE1 TRP 20 -13.689 46.529 14.617 1.00 5.54 ATOM 2089 CE2 TRP 20 -14.446 47.412 15.349 1.00 5.54 ATOM 2090 CZ2 TRP 20 -15.711 47.941 15.125 1.00 5.54 ATOM 2091 CH2 TRP 20 -16.226 48.842 16.066 1.00 5.54 ATOM 2092 CZ3 TRP 20 -15.483 49.202 17.199 1.00 5.54 ATOM 2093 CE3 TRP 20 -14.209 48.664 17.414 1.00 5.54 ATOM 2094 CD2 TRP 20 -13.700 47.768 16.486 1.00 5.54 ATOM 2095 C TRP 20 -10.016 45.874 19.155 1.00 5.54 ATOM 2096 O TRP 20 -8.998 46.341 18.638 1.00 5.54 ATOM 2097 N ALA 21 -10.000 45.312 20.390 1.00 5.73 ATOM 2099 CA ALA 21 -8.807 45.232 21.194 1.00 5.73 ATOM 2100 CB ALA 21 -9.123 44.717 22.603 1.00 5.73 ATOM 2101 C ALA 21 -7.761 44.323 20.630 1.00 5.73 ATOM 2102 O ALA 21 -7.918 43.100 20.611 1.00 5.73 ATOM 2103 N SER 22 -6.632 44.922 20.200 1.00 6.50 ATOM 2105 CA SER 22 -5.562 44.141 19.651 1.00 6.50 ATOM 2106 CB SER 22 -5.607 43.990 18.121 1.00 6.50 ATOM 2107 OG SER 22 -6.761 43.281 17.701 1.00 6.50 ATOM 2109 C SER 22 -4.247 44.778 19.922 1.00 6.50 ATOM 2110 O SER 22 -4.094 45.996 19.831 1.00 6.50 ATOM 2111 N LEU 23 -3.256 43.939 20.288 1.00 7.52 ATOM 2113 CA LEU 23 -1.910 44.390 20.504 1.00 7.52 ATOM 2114 CB LEU 23 -1.077 43.423 21.357 1.00 7.52 ATOM 2115 CG LEU 23 -1.588 43.226 22.791 1.00 7.52 ATOM 2116 CD1 LEU 23 -0.823 42.096 23.476 1.00 7.52 ATOM 2117 CD2 LEU 23 -1.494 44.523 23.610 1.00 7.52 ATOM 2118 C LEU 23 -1.425 44.389 19.088 1.00 7.52 ATOM 2119 O LEU 23 -1.353 43.336 18.441 1.00 7.52 ATOM 2120 N ALA 24 -1.142 45.600 18.570 1.00 8.03 ATOM 2122 CA ALA 24 -0.731 45.716 17.210 1.00 8.03 ATOM 2123 CB ALA 24 -1.523 46.787 16.448 1.00 8.03 ATOM 2124 C ALA 24 0.729 45.913 17.008 1.00 8.03 ATOM 2125 O ALA 24 1.370 46.749 17.633 1.00 8.03 ATOM 2126 N ALA 25 1.284 45.076 16.125 1.00 7.85 ATOM 2128 CA ALA 25 2.659 45.073 15.717 1.00 7.85 ATOM 2129 CB ALA 25 3.156 43.662 15.338 1.00 7.85 ATOM 2130 C ALA 25 2.767 45.963 14.505 1.00 7.85 ATOM 2131 O ALA 25 1.815 46.663 14.148 1.00 7.85 ATOM 2132 N ASN 26 3.965 45.980 13.867 1.00 6.93 ATOM 2134 CA ASN 26 4.219 46.756 12.680 1.00 6.93 ATOM 2135 CB ASN 26 5.630 46.527 12.094 1.00 6.93 ATOM 2136 CG ASN 26 6.699 47.225 12.914 1.00 6.93 ATOM 2137 OD1 ASN 26 6.742 48.453 12.946 1.00 6.93 ATOM 2138 ND2 ASN 26 7.568 46.444 13.608 1.00 6.93 ATOM 2141 C ASN 26 3.251 46.388 11.591 1.00 6.93 ATOM 2142 O ASN 26 3.018 45.213 11.305 1.00 6.93 ATOM 2143 N GLU 27 2.641 47.442 11.004 1.00 5.47 ATOM 2145 CA GLU 27 1.684 47.405 9.930 1.00 5.47 ATOM 2146 CB GLU 27 2.363 47.174 8.563 1.00 5.47 ATOM 2147 CG GLU 27 3.331 48.286 8.130 1.00 5.47 ATOM 2148 CD GLU 27 3.979 47.990 6.770 1.00 5.47 ATOM 2149 OE1 GLU 27 3.812 46.880 6.197 1.00 5.47 ATOM 2150 OE2 GLU 27 4.667 48.919 6.273 1.00 5.47 ATOM 2151 C GLU 27 0.504 46.484 10.144 1.00 5.47 ATOM 2152 O GLU 27 0.087 45.758 9.237 1.00 5.47 ATOM 2153 N LEU 28 -0.037 46.467 11.385 1.00 4.34 ATOM 2155 CA LEU 28 -1.199 45.670 11.675 1.00 4.34 ATOM 2156 CB LEU 28 -1.118 44.721 12.892 1.00 4.34 ATOM 2157 CG LEU 28 0.018 43.671 12.861 1.00 4.34 ATOM 2158 CD1 LEU 28 -0.066 42.736 14.074 1.00 4.34 ATOM 2159 CD2 LEU 28 0.131 42.907 11.541 1.00 4.34 ATOM 2160 C LEU 28 -2.237 46.713 11.918 1.00 4.34 ATOM 2161 O LEU 28 -2.140 47.492 12.869 1.00 4.34 ATOM 2162 N ARG 29 -3.268 46.751 11.056 1.00 3.81 ATOM 2164 CA ARG 29 -4.269 47.769 11.186 1.00 3.81 ATOM 2165 CB ARG 29 -4.383 48.598 9.881 1.00 3.81 ATOM 2166 CG ARG 29 -3.090 49.285 9.374 1.00 3.81 ATOM 2167 CD ARG 29 -2.453 50.347 10.273 1.00 3.81 ATOM 2168 NE ARG 29 -1.419 51.095 9.496 1.00 3.81 ATOM 2170 CZ ARG 29 -0.651 52.091 10.048 1.00 3.81 ATOM 2171 NH1 ARG 29 -0.677 52.410 11.378 1.00 3.81 ATOM 2174 NH2 ARG 29 0.161 52.815 9.226 1.00 3.81 ATOM 2177 C ARG 29 -5.576 47.065 11.421 1.00 3.81 ATOM 2178 O ARG 29 -6.069 46.366 10.537 1.00 3.81 ATOM 2179 N VAL 30 -6.162 47.211 12.631 1.00 3.69 ATOM 2181 CA VAL 30 -7.414 46.576 12.951 1.00 3.69 ATOM 2182 CB VAL 30 -7.523 46.158 14.409 1.00 3.69 ATOM 2183 CG1 VAL 30 -8.885 45.495 14.696 1.00 3.69 ATOM 2184 CG2 VAL 30 -6.299 45.312 14.789 1.00 3.69 ATOM 2185 C VAL 30 -8.453 47.619 12.658 1.00 3.69 ATOM 2186 O VAL 30 -8.612 48.588 13.408 1.00 3.69 ATOM 2187 N THR 31 -9.154 47.420 11.529 1.00 3.89 ATOM 2189 CA THR 31 -10.203 48.284 11.070 1.00 3.89 ATOM 2190 CB THR 31 -10.155 48.565 9.583 1.00 3.89 ATOM 2191 CG2 THR 31 -8.826 49.241 9.221 1.00 3.89 ATOM 2192 OG1 THR 31 -10.286 47.374 8.839 1.00 3.89 ATOM 2194 C THR 31 -11.545 47.792 11.562 1.00 3.89 ATOM 2195 O THR 31 -11.629 46.773 12.253 1.00 3.89 ATOM 2196 N GLU 32 -12.630 48.526 11.212 1.00 4.02 ATOM 2198 CA GLU 32 -13.986 48.237 11.621 1.00 4.02 ATOM 2199 CB GLU 32 -14.992 49.215 10.984 1.00 4.02 ATOM 2200 CG GLU 32 -14.926 50.656 11.514 1.00 4.02 ATOM 2201 CD GLU 32 -15.815 51.607 10.698 1.00 4.02 ATOM 2202 OE1 GLU 32 -16.437 51.196 9.681 1.00 4.02 ATOM 2203 OE2 GLU 32 -15.875 52.799 11.097 1.00 4.02 ATOM 2204 C GLU 32 -14.432 46.852 11.237 1.00 4.02 ATOM 2205 O GLU 32 -15.054 46.165 12.049 1.00 4.02 ATOM 2206 N ARG 33 -14.139 46.422 9.990 1.00 3.88 ATOM 2208 CA ARG 33 -14.504 45.110 9.543 1.00 3.88 ATOM 2209 CB ARG 33 -15.528 45.160 8.387 1.00 3.88 ATOM 2210 CG ARG 33 -16.904 45.663 8.847 1.00 3.88 ATOM 2211 CD ARG 33 -17.954 45.753 7.742 1.00 3.88 ATOM 2212 NE ARG 33 -17.580 46.891 6.850 1.00 3.88 ATOM 2214 CZ ARG 33 -18.180 47.088 5.636 1.00 3.88 ATOM 2215 NH1 ARG 33 -19.131 46.233 5.152 1.00 3.88 ATOM 2218 NH2 ARG 33 -17.811 48.168 4.889 1.00 3.88 ATOM 2221 C ARG 33 -13.252 44.275 9.304 1.00 3.88 ATOM 2222 O ARG 33 -13.233 43.157 9.826 1.00 3.88 ATOM 2223 N PRO 34 -12.222 44.682 8.539 1.00 3.69 ATOM 2224 CA PRO 34 -11.014 43.895 8.367 1.00 3.69 ATOM 2225 CB PRO 34 -10.312 44.399 7.107 1.00 3.69 ATOM 2226 CG PRO 34 -11.365 45.223 6.364 1.00 3.69 ATOM 2227 CD PRO 34 -12.353 45.655 7.451 1.00 3.69 ATOM 2228 C PRO 34 -10.061 43.941 9.545 1.00 3.69 ATOM 2229 O PRO 34 -10.019 44.942 10.263 1.00 3.69 ATOM 2230 N PHE 35 -9.276 42.860 9.743 1.00 3.48 ATOM 2232 CA PHE 35 -7.932 42.973 10.258 1.00 3.48 ATOM 2233 CB PHE 35 -7.412 41.767 11.073 1.00 3.48 ATOM 2234 CG PHE 35 -8.058 41.580 12.393 1.00 3.48 ATOM 2235 CD1 PHE 35 -9.226 40.836 12.518 1.00 3.48 ATOM 2236 CE1 PHE 35 -9.818 40.636 13.763 1.00 3.48 ATOM 2237 CZ PHE 35 -9.222 41.187 14.895 1.00 3.48 ATOM 2238 CE2 PHE 35 -8.044 41.922 14.792 1.00 3.48 ATOM 2239 CD2 PHE 35 -7.465 42.107 13.537 1.00 3.48 ATOM 2240 C PHE 35 -7.006 42.965 9.076 1.00 3.48 ATOM 2241 O PHE 35 -7.037 42.033 8.277 1.00 3.48 ATOM 2242 N TRP 36 -6.187 44.023 8.917 1.00 3.40 ATOM 2244 CA TRP 36 -5.208 44.119 7.857 1.00 3.40 ATOM 2245 CB TRP 36 -5.013 45.537 7.301 1.00 3.40 ATOM 2246 CG TRP 36 -6.175 46.063 6.504 1.00 3.40 ATOM 2247 CD1 TRP 36 -7.273 46.748 6.937 1.00 3.40 ATOM 2248 NE1 TRP 36 -8.086 47.065 5.873 1.00 3.40 ATOM 2250 CE2 TRP 36 -7.501 46.591 4.718 1.00 3.40 ATOM 2251 CZ2 TRP 36 -7.904 46.657 3.390 1.00 3.40 ATOM 2252 CH2 TRP 36 -7.079 46.073 2.418 1.00 3.40 ATOM 2253 CZ3 TRP 36 -5.878 45.442 2.777 1.00 3.40 ATOM 2254 CE3 TRP 36 -5.473 45.377 4.117 1.00 3.40 ATOM 2255 CD2 TRP 36 -6.296 45.955 5.078 1.00 3.40 ATOM 2256 C TRP 36 -3.922 43.731 8.515 1.00 3.40 ATOM 2257 O TRP 36 -3.492 44.379 9.469 1.00 3.40 ATOM 2258 N ILE 37 -3.276 42.663 8.010 1.00 3.43 ATOM 2260 CA ILE 37 -2.059 42.161 8.593 1.00 3.43 ATOM 2261 CB ILE 37 -2.278 40.692 8.914 1.00 3.43 ATOM 2262 CG2 ILE 37 -1.050 40.110 9.632 1.00 3.43 ATOM 2263 CG1 ILE 37 -3.514 40.571 9.824 1.00 3.43 ATOM 2264 CD1 ILE 37 -4.053 39.176 10.020 1.00 3.43 ATOM 2265 C ILE 37 -1.043 42.340 7.493 1.00 3.43 ATOM 2266 O ILE 37 -1.096 41.623 6.488 1.00 3.43 ATOM 2267 N SER 38 -0.131 43.338 7.637 1.00 3.42 ATOM 2269 CA SER 38 0.851 43.564 6.613 1.00 3.42 ATOM 2270 CB SER 38 0.797 44.994 6.045 1.00 3.42 ATOM 2271 OG SER 38 -0.451 45.207 5.398 1.00 3.42 ATOM 2273 C SER 38 2.269 43.230 6.978 1.00 3.42 ATOM 2274 O SER 38 2.873 42.430 6.268 1.00 3.42 ATOM 2275 N SER 39 2.849 43.803 8.068 1.00 3.41 ATOM 2277 CA SER 39 4.217 43.460 8.392 1.00 3.41 ATOM 2278 CB SER 39 5.123 44.602 8.902 1.00 3.41 ATOM 2279 OG SER 39 6.421 44.120 9.234 1.00 3.41 ATOM 2281 C SER 39 4.190 42.335 9.372 1.00 3.41 ATOM 2282 O SER 39 3.452 42.352 10.360 1.00 3.41 ATOM 2283 N PHE 40 4.999 41.307 9.060 1.00 3.78 ATOM 2285 CA PHE 40 5.083 40.115 9.859 1.00 3.78 ATOM 2286 CB PHE 40 4.984 38.845 8.981 1.00 3.78 ATOM 2287 CG PHE 40 3.824 38.994 8.054 1.00 3.78 ATOM 2288 CD1 PHE 40 4.125 39.059 6.689 1.00 3.78 ATOM 2289 CE1 PHE 40 3.119 39.231 5.743 1.00 3.78 ATOM 2290 CZ PHE 40 1.799 39.365 6.162 1.00 3.78 ATOM 2291 CE2 PHE 40 1.494 39.328 7.522 1.00 3.78 ATOM 2292 CD2 PHE 40 2.498 39.152 8.475 1.00 3.78 ATOM 2293 C PHE 40 6.477 40.040 10.434 1.00 3.78 ATOM 2294 O PHE 40 6.698 39.341 11.422 1.00 3.78 ATOM 2295 N ILE 41 7.435 40.789 9.825 1.00 4.29 ATOM 2297 CA ILE 41 8.836 40.814 10.165 1.00 4.29 ATOM 2298 CB ILE 41 9.650 41.685 9.206 1.00 4.29 ATOM 2299 CG2 ILE 41 11.121 41.863 9.661 1.00 4.29 ATOM 2300 CG1 ILE 41 9.585 41.043 7.809 1.00 4.29 ATOM 2301 CD1 ILE 41 10.189 41.881 6.691 1.00 4.29 ATOM 2302 C ILE 41 9.086 41.187 11.591 1.00 4.29 ATOM 2303 O ILE 41 8.528 42.151 12.121 1.00 4.29 ATOM 2304 N GLY 42 9.950 40.365 12.220 1.00 4.60 ATOM 2306 CA GLY 42 10.324 40.559 13.580 1.00 4.60 ATOM 2307 C GLY 42 10.552 39.242 14.234 1.00 4.60 ATOM 2308 O GLY 42 10.981 38.267 13.613 1.00 4.60 ATOM 2309 N ARG 43 10.259 39.232 15.548 1.00 4.89 ATOM 2311 CA ARG 43 10.378 38.118 16.452 1.00 4.89 ATOM 2312 CB ARG 43 10.241 38.555 17.926 1.00 4.89 ATOM 2313 CG ARG 43 11.359 39.497 18.371 1.00 4.89 ATOM 2314 CD ARG 43 11.305 39.923 19.833 1.00 4.89 ATOM 2315 NE ARG 43 12.469 40.833 20.033 1.00 4.89 ATOM 2317 CZ ARG 43 12.900 41.222 21.271 1.00 4.89 ATOM 2318 NH1 ARG 43 13.917 42.127 21.350 1.00 4.89 ATOM 2321 NH2 ARG 43 12.354 40.722 22.419 1.00 4.89 ATOM 2324 C ARG 43 9.304 37.101 16.166 1.00 4.89 ATOM 2325 O ARG 43 8.416 37.325 15.339 1.00 4.89 ATOM 2326 N SER 44 9.386 35.926 16.843 1.00 4.67 ATOM 2328 CA SER 44 8.435 34.849 16.688 1.00 4.67 ATOM 2329 CB SER 44 8.736 33.657 17.610 1.00 4.67 ATOM 2330 OG SER 44 9.969 33.052 17.255 1.00 4.67 ATOM 2332 C SER 44 7.061 35.346 17.049 1.00 4.67 ATOM 2333 O SER 44 6.101 35.080 16.328 1.00 4.67 ATOM 2334 N LYS 45 6.962 36.145 18.139 1.00 4.10 ATOM 2336 CA LYS 45 5.723 36.716 18.592 1.00 4.10 ATOM 2337 CB LYS 45 5.833 37.330 19.991 1.00 4.10 ATOM 2338 CG LYS 45 5.713 36.308 21.118 1.00 4.10 ATOM 2339 CD LYS 45 4.276 36.103 21.608 1.00 4.10 ATOM 2340 CE LYS 45 3.446 35.041 20.889 1.00 4.10 ATOM 2341 NZ LYS 45 2.050 35.129 21.362 1.00 4.10 ATOM 2345 C LYS 45 5.175 37.727 17.630 1.00 4.10 ATOM 2346 O LYS 45 3.958 37.865 17.533 1.00 4.10 TER END