####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS058_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS058_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 33 6 - 38 4.99 8.86 LCS_AVERAGE: 64.98 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.97 16.90 LCS_AVERAGE: 18.18 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 21 - 29 0.73 16.11 LCS_AVERAGE: 12.86 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 6 10 0 3 5 5 6 6 7 10 11 12 18 19 21 22 23 27 31 31 33 35 LCS_GDT V 3 V 3 5 6 15 3 4 5 5 6 6 7 10 11 12 14 19 21 22 27 28 32 33 36 36 LCS_GDT Q 4 Q 4 5 6 15 3 4 5 5 6 7 8 11 12 15 18 22 26 27 31 32 34 35 36 36 LCS_GDT G 5 G 5 5 6 17 3 4 5 5 6 7 9 11 14 18 22 25 27 30 32 34 34 35 36 36 LCS_GDT P 6 P 6 5 6 33 2 4 5 5 7 8 11 11 16 18 22 25 27 30 32 34 34 35 36 36 LCS_GDT W 7 W 7 4 6 33 0 3 5 5 7 8 11 15 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT V 8 V 8 4 7 33 3 3 5 7 10 12 15 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT G 9 G 9 6 7 33 4 6 6 7 7 12 15 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT S 10 S 10 6 7 33 5 6 6 7 8 12 15 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT S 11 S 11 6 7 33 5 6 6 7 10 11 14 18 19 20 23 25 28 30 32 34 34 35 36 36 LCS_GDT Y 12 Y 12 6 7 33 5 6 6 7 7 8 11 11 16 17 19 23 28 30 32 34 34 35 36 36 LCS_GDT V 13 V 13 6 7 33 5 6 6 7 7 8 11 11 16 18 22 25 28 30 32 34 34 35 36 36 LCS_GDT A 14 A 14 6 8 33 5 6 6 7 10 12 15 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT E 15 E 15 4 8 33 3 4 6 7 7 9 11 14 18 20 23 24 28 30 32 34 34 35 36 36 LCS_GDT T 16 T 16 4 8 33 3 4 5 7 7 10 15 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT G 17 G 17 4 8 33 3 4 4 7 9 10 11 15 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT Q 18 Q 18 4 8 33 3 3 4 7 9 10 10 15 17 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT N 19 N 19 4 11 33 3 3 4 7 7 7 10 11 16 20 22 25 28 30 32 34 34 35 36 36 LCS_GDT W 20 W 20 4 11 33 3 3 4 7 10 12 14 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT A 21 A 21 9 11 33 3 6 9 9 9 9 12 15 18 20 23 25 28 30 32 34 34 35 36 36 LCS_GDT S 22 S 22 9 11 33 8 8 9 9 9 9 10 11 13 13 18 23 27 30 32 34 34 35 36 36 LCS_GDT L 23 L 23 9 11 33 8 8 9 9 9 9 10 11 13 18 22 25 28 30 32 34 34 35 36 36 LCS_GDT A 24 A 24 9 11 33 8 8 9 9 9 10 15 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT A 25 A 25 9 11 33 8 8 9 9 9 11 15 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT N 26 N 26 9 11 33 8 8 9 9 10 12 15 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT E 27 E 27 9 11 33 8 8 9 9 9 9 10 11 13 15 20 23 27 30 32 34 34 35 36 36 LCS_GDT L 28 L 28 9 11 33 8 8 9 9 9 9 10 11 13 16 19 23 27 30 32 34 34 35 36 36 LCS_GDT R 29 R 29 9 11 33 8 8 9 9 9 10 13 17 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT V 30 V 30 5 10 33 3 5 5 7 9 10 15 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT T 31 T 31 5 8 33 3 5 5 7 9 12 15 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT E 32 E 32 5 8 33 3 5 5 7 10 12 15 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT R 33 R 33 5 8 33 3 5 5 7 10 12 15 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT P 34 P 34 5 8 33 3 5 7 8 10 12 15 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT F 35 F 35 5 8 33 3 4 7 8 10 12 15 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT W 36 W 36 4 8 33 3 4 7 8 10 12 15 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT I 37 I 37 4 7 33 3 4 5 8 10 11 14 18 19 21 23 25 28 30 32 34 34 35 36 36 LCS_GDT S 38 S 38 5 7 33 4 5 7 8 10 10 12 15 16 20 23 24 27 30 32 34 34 35 36 36 LCS_GDT S 39 S 39 5 5 16 4 5 5 5 6 7 9 11 16 17 17 18 21 24 27 29 32 33 34 35 LCS_GDT F 40 F 40 5 6 16 4 5 5 5 6 7 9 11 16 17 17 18 21 21 27 28 32 33 34 35 LCS_GDT I 41 I 41 5 6 16 4 5 7 8 10 10 11 11 16 17 17 19 21 24 28 29 32 33 34 35 LCS_GDT G 42 G 42 5 6 16 3 5 7 8 10 10 10 11 11 13 14 16 19 20 22 23 26 28 31 33 LCS_GDT R 43 R 43 4 6 16 3 4 7 8 10 10 10 11 16 17 17 18 20 20 21 22 22 26 28 32 LCS_GDT S 44 S 44 4 6 16 3 4 6 6 10 10 10 11 16 17 17 18 20 20 21 22 22 23 24 26 LCS_GDT K 45 K 45 4 6 16 3 3 4 5 5 7 7 7 11 11 12 14 19 20 21 22 22 23 24 24 LCS_AVERAGE LCS_A: 32.01 ( 12.86 18.18 64.98 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 8 9 9 10 12 15 18 19 21 23 25 28 30 32 34 34 35 36 36 GDT PERCENT_AT 18.18 18.18 20.45 20.45 22.73 27.27 34.09 40.91 43.18 47.73 52.27 56.82 63.64 68.18 72.73 77.27 77.27 79.55 81.82 81.82 GDT RMS_LOCAL 0.29 0.29 0.73 0.73 1.46 2.32 2.79 2.96 3.07 3.47 3.62 3.94 4.29 4.56 4.84 5.12 5.12 5.35 5.64 5.64 GDT RMS_ALL_AT 15.76 15.76 16.11 16.11 14.13 9.28 9.17 9.03 9.05 9.03 9.01 9.08 9.14 9.01 8.90 8.85 8.85 8.83 8.84 8.84 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 17.353 0 0.580 0.583 18.889 0.000 0.000 - LGA V 3 V 3 14.579 0 0.081 0.100 15.914 0.000 0.000 13.519 LGA Q 4 Q 4 12.463 0 0.049 1.134 16.160 0.000 0.000 16.160 LGA G 5 G 5 9.984 0 0.083 0.083 10.521 0.000 0.000 - LGA P 6 P 6 8.826 0 0.659 0.574 12.949 0.000 0.000 12.551 LGA W 7 W 7 6.403 0 0.424 1.150 12.520 1.364 0.390 12.520 LGA V 8 V 8 2.329 0 0.646 1.461 5.734 27.273 17.922 5.734 LGA G 9 G 9 3.491 0 0.496 0.496 4.658 19.091 19.091 - LGA S 10 S 10 3.848 0 0.050 0.577 6.903 31.818 21.212 6.903 LGA S 11 S 11 3.055 0 0.062 0.602 6.864 25.000 16.667 6.864 LGA Y 12 Y 12 6.916 0 0.091 1.088 18.242 0.455 0.152 18.242 LGA V 13 V 13 7.183 0 0.032 1.167 10.417 0.000 0.000 10.417 LGA A 14 A 14 1.874 0 0.616 0.599 3.740 42.273 36.000 - LGA E 15 E 15 5.352 0 0.069 1.219 10.894 4.545 2.020 10.894 LGA T 16 T 16 3.676 0 0.204 1.153 5.494 8.182 10.909 3.714 LGA G 17 G 17 5.560 0 0.642 0.642 7.130 4.545 4.545 - LGA Q 18 Q 18 6.588 0 0.148 0.311 14.327 4.545 2.020 12.159 LGA N 19 N 19 6.615 0 0.654 0.562 12.761 5.909 2.955 12.425 LGA W 20 W 20 3.103 0 0.566 1.212 7.450 25.000 16.364 7.450 LGA A 21 A 21 5.368 0 0.079 0.079 7.303 2.727 2.182 - LGA S 22 S 22 7.476 0 0.162 0.609 11.195 0.000 0.000 11.195 LGA L 23 L 23 6.896 0 0.117 1.406 13.265 0.000 0.000 13.265 LGA A 24 A 24 3.857 0 0.054 0.059 4.319 13.636 12.000 - LGA A 25 A 25 2.814 0 0.045 0.043 4.881 42.727 34.545 - LGA N 26 N 26 2.388 0 0.055 0.873 9.285 33.182 16.591 6.861 LGA E 27 E 27 7.426 0 0.083 1.016 12.998 0.455 0.202 12.998 LGA L 28 L 28 8.514 0 0.276 1.396 13.027 0.000 0.000 12.401 LGA R 29 R 29 5.126 0 0.377 1.356 9.761 0.455 0.165 9.642 LGA V 30 V 30 3.935 0 0.605 0.543 5.351 8.182 5.714 5.351 LGA T 31 T 31 2.207 0 0.160 0.286 3.509 45.455 35.325 2.941 LGA E 32 E 32 1.211 0 0.072 0.792 2.681 69.545 55.354 2.215 LGA R 33 R 33 1.600 0 0.625 1.161 11.946 43.182 17.521 11.946 LGA P 34 P 34 2.905 0 0.153 0.186 5.719 25.455 15.325 5.719 LGA F 35 F 35 2.373 0 0.135 1.544 4.523 51.818 33.058 4.296 LGA W 36 W 36 2.561 0 0.025 0.787 3.910 20.909 28.442 3.910 LGA I 37 I 37 3.921 0 0.636 1.192 7.282 7.273 14.773 1.432 LGA S 38 S 38 7.121 0 0.673 0.601 11.377 0.000 0.000 9.022 LGA S 39 S 39 14.127 0 0.157 0.716 16.694 0.000 0.000 15.352 LGA F 40 F 40 13.520 0 0.589 0.935 17.749 0.000 0.000 17.749 LGA I 41 I 41 12.774 0 0.064 0.634 17.331 0.000 0.000 8.829 LGA G 42 G 42 17.072 0 0.183 0.183 20.206 0.000 0.000 - LGA R 43 R 43 16.974 0 0.053 1.106 20.283 0.000 0.000 19.737 LGA S 44 S 44 19.942 0 0.071 0.665 21.946 0.000 0.000 21.716 LGA K 45 K 45 20.933 0 0.614 0.743 25.275 0.000 0.000 25.275 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.437 8.390 9.639 12.841 9.578 4.519 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 18 2.96 39.205 33.214 0.589 LGA_LOCAL RMSD: 2.956 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.031 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.437 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.593262 * X + -0.102430 * Y + 0.798466 * Z + 14.277074 Y_new = 0.337114 * X + 0.932323 * Y + -0.130874 * Z + 66.795609 Z_new = -0.731023 * X + 0.346816 * Y + 0.587643 * Z + 35.231598 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.516737 0.819820 0.533169 [DEG: 29.6068 46.9722 30.5484 ] ZXZ: 1.408334 0.942654 -1.127816 [DEG: 80.6916 54.0101 -64.6191 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS058_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS058_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 18 2.96 33.214 8.44 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS058_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 12 N ALA 2 -1.280 48.965 15.857 1.00 11.08 ATOM 13 CA ALA 2 -0.411 49.634 14.937 1.00 11.08 ATOM 14 C ALA 2 -0.794 49.236 13.547 1.00 11.08 ATOM 15 O ALA 2 -0.922 50.115 12.698 1.00 11.08 ATOM 17 CB ALA 2 1.040 49.293 15.236 1.00 11.08 ATOM 18 N VAL 3 -0.974 47.909 13.311 1.00 10.60 ATOM 19 CA VAL 3 -1.402 47.268 12.082 1.00 10.60 ATOM 20 C VAL 3 -0.411 46.197 11.714 1.00 10.60 ATOM 21 O VAL 3 0.773 46.301 12.031 1.00 10.60 ATOM 23 CB VAL 3 -1.559 48.287 10.938 1.00 10.60 ATOM 24 CG1 VAL 3 -1.931 47.582 9.643 1.00 10.60 ATOM 25 CG2 VAL 3 -2.601 49.335 11.298 1.00 10.60 ATOM 26 N GLN 4 -0.897 45.129 11.035 1.00 10.84 ATOM 27 CA GLN 4 -0.102 44.018 10.578 1.00 10.84 ATOM 28 C GLN 4 0.043 44.187 9.096 1.00 10.84 ATOM 29 O GLN 4 -0.935 44.466 8.404 1.00 10.84 ATOM 31 CB GLN 4 -0.766 42.693 10.958 1.00 10.84 ATOM 32 CD GLN 4 -0.085 40.976 9.235 1.00 10.84 ATOM 33 CG GLN 4 0.082 41.467 10.659 1.00 10.84 ATOM 34 OE1 GLN 4 -1.202 40.888 8.725 1.00 10.84 ATOM 37 NE2 GLN 4 1.029 40.654 8.586 1.00 10.84 ATOM 38 N GLY 5 1.265 44.001 8.554 1.00 11.41 ATOM 39 CA GLY 5 1.443 44.219 7.144 1.00 11.41 ATOM 40 C GLY 5 1.621 42.905 6.451 1.00 11.41 ATOM 41 O GLY 5 2.197 41.958 6.983 1.00 11.41 ATOM 43 N PRO 6 1.131 42.858 5.241 1.00 12.01 ATOM 44 CA PRO 6 1.197 41.662 4.448 1.00 12.01 ATOM 45 C PRO 6 2.621 41.208 4.363 1.00 12.01 ATOM 46 O PRO 6 3.473 42.000 3.967 1.00 12.01 ATOM 47 CB PRO 6 0.641 42.088 3.088 1.00 12.01 ATOM 48 CD PRO 6 0.334 43.993 4.504 1.00 12.01 ATOM 49 CG PRO 6 -0.308 43.195 3.403 1.00 12.01 ATOM 50 N TRP 7 2.891 39.930 4.700 1.00 12.24 ATOM 51 CA TRP 7 4.219 39.390 4.636 1.00 12.24 ATOM 52 C TRP 7 4.096 38.052 3.973 1.00 12.24 ATOM 53 O TRP 7 3.086 37.366 4.121 1.00 12.24 ATOM 55 CB TRP 7 4.829 39.299 6.036 1.00 12.24 ATOM 58 CG TRP 7 6.247 38.817 6.042 1.00 12.24 ATOM 59 CD1 TRP 7 6.676 37.537 6.243 1.00 12.24 ATOM 61 NE1 TRP 7 8.048 37.480 6.177 1.00 12.24 ATOM 62 CD2 TRP 7 7.424 39.608 5.837 1.00 12.24 ATOM 63 CE2 TRP 7 8.528 38.741 5.927 1.00 12.24 ATOM 64 CH2 TRP 7 10.034 40.517 5.532 1.00 12.24 ATOM 65 CZ2 TRP 7 9.841 39.186 5.776 1.00 12.24 ATOM 66 CE3 TRP 7 7.651 40.964 5.586 1.00 12.24 ATOM 67 CZ3 TRP 7 8.954 41.400 5.436 1.00 12.24 ATOM 68 N VAL 8 5.131 37.638 3.216 1.00 11.97 ATOM 69 CA VAL 8 5.012 36.422 2.463 1.00 11.97 ATOM 70 C VAL 8 5.885 35.351 3.043 1.00 11.97 ATOM 71 O VAL 8 6.940 35.619 3.614 1.00 11.97 ATOM 73 CB VAL 8 5.364 36.640 0.980 1.00 11.97 ATOM 74 CG1 VAL 8 4.399 37.629 0.343 1.00 11.97 ATOM 75 CG2 VAL 8 6.799 37.123 0.838 1.00 11.97 ATOM 76 N GLY 9 5.410 34.090 2.940 1.00 9.41 ATOM 77 CA GLY 9 6.184 32.932 3.289 1.00 9.41 ATOM 78 C GLY 9 6.533 32.924 4.741 1.00 9.41 ATOM 79 O GLY 9 7.684 32.684 5.103 1.00 9.41 ATOM 81 N SER 10 5.547 33.179 5.615 1.00 9.77 ATOM 82 CA SER 10 5.799 33.193 7.027 1.00 9.77 ATOM 83 C SER 10 6.118 31.801 7.492 1.00 9.77 ATOM 84 O SER 10 6.653 31.610 8.582 1.00 9.77 ATOM 86 CB SER 10 4.593 33.758 7.780 1.00 9.77 ATOM 88 OG SER 10 4.386 35.123 7.461 1.00 9.77 ATOM 89 N SER 11 5.809 30.782 6.671 1.00 10.18 ATOM 90 CA SER 11 6.033 29.426 7.082 1.00 10.18 ATOM 91 C SER 11 7.493 29.217 7.330 1.00 10.18 ATOM 92 O SER 11 7.874 28.424 8.189 1.00 10.18 ATOM 94 CB SER 11 5.511 28.452 6.023 1.00 10.18 ATOM 96 OG SER 11 6.264 28.548 4.827 1.00 10.18 ATOM 97 N TYR 12 8.364 29.926 6.589 1.00 10.46 ATOM 98 CA TYR 12 9.763 29.712 6.804 1.00 10.46 ATOM 99 C TYR 12 10.106 30.085 8.208 1.00 10.46 ATOM 100 O TYR 12 10.787 29.334 8.904 1.00 10.46 ATOM 102 CB TYR 12 10.589 30.519 5.800 1.00 10.46 ATOM 103 CG TYR 12 12.083 30.390 5.993 1.00 10.46 ATOM 105 OH TYR 12 16.192 30.020 6.513 1.00 10.46 ATOM 106 CZ TYR 12 14.833 30.143 6.342 1.00 10.46 ATOM 107 CD1 TYR 12 12.766 29.273 5.529 1.00 10.46 ATOM 108 CE1 TYR 12 14.132 29.145 5.701 1.00 10.46 ATOM 109 CD2 TYR 12 12.808 31.386 6.636 1.00 10.46 ATOM 110 CE2 TYR 12 14.172 31.276 6.816 1.00 10.46 ATOM 111 N VAL 13 9.632 31.257 8.670 1.00 9.13 ATOM 112 CA VAL 13 10.014 31.691 9.982 1.00 9.13 ATOM 113 C VAL 13 9.471 30.754 11.013 1.00 9.13 ATOM 114 O VAL 13 10.175 30.399 11.958 1.00 9.13 ATOM 116 CB VAL 13 9.538 33.128 10.262 1.00 9.13 ATOM 117 CG1 VAL 13 10.148 34.096 9.259 1.00 9.13 ATOM 118 CG2 VAL 13 8.020 33.203 10.225 1.00 9.13 ATOM 119 N ALA 14 8.203 30.325 10.871 1.00 8.43 ATOM 120 CA ALA 14 7.671 29.455 11.879 1.00 8.43 ATOM 121 C ALA 14 6.854 28.392 11.216 1.00 8.43 ATOM 122 O ALA 14 6.274 28.602 10.152 1.00 8.43 ATOM 124 CB ALA 14 6.842 30.247 12.880 1.00 8.43 ATOM 125 N GLU 15 6.797 27.209 11.856 1.00 8.60 ATOM 126 CA GLU 15 6.057 26.086 11.362 1.00 8.60 ATOM 127 C GLU 15 4.623 26.486 11.343 1.00 8.60 ATOM 128 O GLU 15 3.887 26.183 10.406 1.00 8.60 ATOM 130 CB GLU 15 6.306 24.855 12.236 1.00 8.60 ATOM 131 CD GLU 15 7.938 23.104 13.044 1.00 8.60 ATOM 132 CG GLU 15 7.704 24.274 12.108 1.00 8.60 ATOM 133 OE1 GLU 15 7.082 22.866 13.922 1.00 8.60 ATOM 134 OE2 GLU 15 8.976 22.426 12.899 1.00 8.60 ATOM 135 N THR 16 4.204 27.212 12.392 1.00 8.55 ATOM 136 CA THR 16 2.849 27.650 12.515 1.00 8.55 ATOM 137 C THR 16 2.530 28.439 11.286 1.00 8.55 ATOM 138 O THR 16 1.521 28.194 10.627 1.00 8.55 ATOM 140 CB THR 16 2.639 28.483 13.793 1.00 8.55 ATOM 142 OG1 THR 16 2.917 27.675 14.944 1.00 8.55 ATOM 143 CG2 THR 16 1.202 28.974 13.879 1.00 8.55 ATOM 144 N GLY 17 3.401 29.394 10.919 1.00 9.22 ATOM 145 CA GLY 17 3.226 30.046 9.658 1.00 9.22 ATOM 146 C GLY 17 2.291 31.214 9.682 1.00 9.22 ATOM 147 O GLY 17 2.198 31.976 10.644 1.00 9.22 ATOM 149 N GLN 18 1.565 31.326 8.551 1.00 10.43 ATOM 150 CA GLN 18 0.763 32.426 8.111 1.00 10.43 ATOM 151 C GLN 18 -0.314 32.770 9.075 1.00 10.43 ATOM 152 O GLN 18 -0.495 32.149 10.122 1.00 10.43 ATOM 154 CB GLN 18 0.141 32.124 6.746 1.00 10.43 ATOM 155 CD GLN 18 1.979 33.131 5.337 1.00 10.43 ATOM 156 CG GLN 18 1.156 31.894 5.639 1.00 10.43 ATOM 157 OE1 GLN 18 1.831 34.162 5.993 1.00 10.43 ATOM 160 NE2 GLN 18 2.851 33.031 4.341 1.00 10.43 ATOM 161 N ASN 19 -1.033 33.845 8.716 1.00 10.37 ATOM 162 CA ASN 19 -2.092 34.385 9.494 1.00 10.37 ATOM 163 C ASN 19 -3.015 33.266 9.844 1.00 10.37 ATOM 164 O ASN 19 -3.354 32.418 9.021 1.00 10.37 ATOM 166 CB ASN 19 -2.798 35.508 8.731 1.00 10.37 ATOM 167 CG ASN 19 -1.936 36.746 8.587 1.00 10.37 ATOM 168 OD1 ASN 19 -0.948 36.745 7.852 1.00 10.37 ATOM 171 ND2 ASN 19 -2.306 37.810 9.292 1.00 10.37 ATOM 172 N TRP 20 -3.447 33.299 11.114 1.00 8.64 ATOM 173 CA TRP 20 -4.324 32.417 11.816 1.00 8.64 ATOM 174 C TRP 20 -3.539 31.358 12.498 1.00 8.64 ATOM 175 O TRP 20 -3.666 31.182 13.710 1.00 8.64 ATOM 177 CB TRP 20 -5.343 31.799 10.856 1.00 8.64 ATOM 180 CG TRP 20 -6.310 30.872 11.525 1.00 8.64 ATOM 181 CD1 TRP 20 -6.228 29.510 11.590 1.00 8.64 ATOM 183 NE1 TRP 20 -7.300 29.004 12.286 1.00 8.64 ATOM 184 CD2 TRP 20 -7.507 31.237 12.223 1.00 8.64 ATOM 185 CE2 TRP 20 -8.098 30.046 12.685 1.00 8.64 ATOM 186 CH2 TRP 20 -9.881 31.241 13.670 1.00 8.64 ATOM 187 CZ2 TRP 20 -9.288 30.037 13.411 1.00 8.64 ATOM 188 CE3 TRP 20 -8.135 32.454 12.503 1.00 8.64 ATOM 189 CZ3 TRP 20 -9.314 32.439 13.223 1.00 8.64 ATOM 190 N ALA 21 -2.641 30.681 11.774 1.00 6.55 ATOM 191 CA ALA 21 -1.898 29.666 12.446 1.00 6.55 ATOM 192 C ALA 21 -1.032 30.354 13.440 1.00 6.55 ATOM 193 O ALA 21 -0.908 29.931 14.588 1.00 6.55 ATOM 195 CB ALA 21 -1.097 28.848 11.447 1.00 6.55 ATOM 196 N SER 22 -0.431 31.481 13.025 1.00 6.35 ATOM 197 CA SER 22 0.507 32.099 13.909 1.00 6.35 ATOM 198 C SER 22 0.359 33.575 13.838 1.00 6.35 ATOM 199 O SER 22 -0.126 34.219 14.767 1.00 6.35 ATOM 201 CB SER 22 1.935 31.676 13.556 1.00 6.35 ATOM 203 OG SER 22 2.874 32.264 14.439 1.00 6.35 ATOM 204 N LEU 23 0.796 34.141 12.701 1.00 7.07 ATOM 205 CA LEU 23 0.905 35.557 12.547 1.00 7.07 ATOM 206 C LEU 23 -0.428 36.185 12.804 1.00 7.07 ATOM 207 O LEU 23 -0.537 37.077 13.644 1.00 7.07 ATOM 209 CB LEU 23 1.418 35.906 11.149 1.00 7.07 ATOM 210 CG LEU 23 1.542 37.395 10.824 1.00 7.07 ATOM 211 CD1 LEU 23 2.534 38.069 11.760 1.00 7.07 ATOM 212 CD2 LEU 23 1.961 37.597 9.375 1.00 7.07 ATOM 213 N ALA 24 -1.492 35.731 12.111 1.00 7.01 ATOM 214 CA ALA 24 -2.756 36.361 12.363 1.00 7.01 ATOM 215 C ALA 24 -3.201 36.028 13.739 1.00 7.01 ATOM 216 O ALA 24 -3.889 36.827 14.367 1.00 7.01 ATOM 218 CB ALA 24 -3.783 35.920 11.332 1.00 7.01 ATOM 219 N ALA 25 -2.844 34.831 14.240 1.00 6.61 ATOM 220 CA ALA 25 -3.292 34.453 15.549 1.00 6.61 ATOM 221 C ALA 25 -2.805 35.497 16.497 1.00 6.61 ATOM 222 O ALA 25 -3.537 35.940 17.381 1.00 6.61 ATOM 224 CB ALA 25 -2.780 33.066 15.905 1.00 6.61 ATOM 225 N ASN 26 -1.552 35.943 16.314 1.00 6.60 ATOM 226 CA ASN 26 -1.036 36.977 17.155 1.00 6.60 ATOM 227 C ASN 26 -1.887 38.197 16.959 1.00 6.60 ATOM 228 O ASN 26 -2.289 38.851 17.921 1.00 6.60 ATOM 230 CB ASN 26 0.439 37.239 16.838 1.00 6.60 ATOM 231 CG ASN 26 1.075 38.223 17.799 1.00 6.60 ATOM 232 OD1 ASN 26 1.172 37.960 18.999 1.00 6.60 ATOM 235 ND2 ASN 26 1.512 39.362 17.275 1.00 6.60 ATOM 236 N GLU 27 -2.207 38.519 15.698 1.00 6.99 ATOM 237 CA GLU 27 -2.947 39.723 15.447 1.00 6.99 ATOM 238 C GLU 27 -4.259 39.643 16.153 1.00 6.99 ATOM 239 O GLU 27 -4.734 40.629 16.713 1.00 6.99 ATOM 241 CB GLU 27 -3.140 39.930 13.943 1.00 6.99 ATOM 242 CD GLU 27 -1.284 41.613 13.623 1.00 6.99 ATOM 243 CG GLU 27 -1.863 40.278 13.196 1.00 6.99 ATOM 244 OE1 GLU 27 -2.040 42.441 14.172 1.00 6.99 ATOM 245 OE2 GLU 27 -0.072 41.831 13.409 1.00 6.99 ATOM 246 N LEU 28 -4.893 38.462 16.132 1.00 6.88 ATOM 247 CA LEU 28 -6.179 38.345 16.746 1.00 6.88 ATOM 248 C LEU 28 -6.050 38.593 18.212 1.00 6.88 ATOM 249 O LEU 28 -6.818 39.364 18.787 1.00 6.88 ATOM 251 CB LEU 28 -6.780 36.965 16.472 1.00 6.88 ATOM 252 CG LEU 28 -8.141 36.681 17.109 1.00 6.88 ATOM 253 CD1 LEU 28 -9.191 37.651 16.589 1.00 6.88 ATOM 254 CD2 LEU 28 -8.570 35.245 16.843 1.00 6.88 ATOM 255 N ARG 29 -5.049 37.963 18.856 1.00 6.95 ATOM 256 CA ARG 29 -4.913 38.074 20.280 1.00 6.95 ATOM 257 C ARG 29 -4.615 39.491 20.650 1.00 6.95 ATOM 258 O ARG 29 -5.193 40.021 21.597 1.00 6.95 ATOM 260 CB ARG 29 -3.815 37.137 20.788 1.00 6.95 ATOM 261 CD ARG 29 -3.022 34.787 21.178 1.00 6.95 ATOM 263 NE ARG 29 -3.360 33.367 21.134 1.00 6.95 ATOM 264 CG ARG 29 -4.180 35.662 20.725 1.00 6.95 ATOM 265 CZ ARG 29 -2.482 32.385 21.312 1.00 6.95 ATOM 268 NH1 ARG 29 -2.880 31.121 21.253 1.00 6.95 ATOM 271 NH2 ARG 29 -1.209 32.668 21.548 1.00 6.95 ATOM 272 N VAL 30 -3.726 40.157 19.890 1.00 7.13 ATOM 273 CA VAL 30 -3.399 41.520 20.205 1.00 7.13 ATOM 274 C VAL 30 -4.656 42.306 20.065 1.00 7.13 ATOM 275 O VAL 30 -4.829 43.349 20.696 1.00 7.13 ATOM 277 CB VAL 30 -2.276 42.054 19.297 1.00 7.13 ATOM 278 CG1 VAL 30 -2.084 43.548 19.509 1.00 7.13 ATOM 279 CG2 VAL 30 -0.978 41.304 19.556 1.00 7.13 ATOM 280 N THR 31 -5.573 41.794 19.227 1.00 9.16 ATOM 281 CA THR 31 -6.835 42.423 18.986 1.00 9.16 ATOM 282 C THR 31 -6.597 43.590 18.084 1.00 9.16 ATOM 283 O THR 31 -7.453 44.458 17.915 1.00 9.16 ATOM 285 CB THR 31 -7.507 42.862 20.300 1.00 9.16 ATOM 287 OG1 THR 31 -6.865 44.044 20.796 1.00 9.16 ATOM 288 CG2 THR 31 -7.389 41.768 21.350 1.00 9.16 ATOM 289 N GLU 32 -5.415 43.645 17.443 1.00 8.31 ATOM 290 CA GLU 32 -5.322 44.670 16.454 1.00 8.31 ATOM 291 C GLU 32 -6.296 44.208 15.428 1.00 8.31 ATOM 292 O GLU 32 -6.274 43.047 15.022 1.00 8.31 ATOM 294 CB GLU 32 -3.883 44.803 15.954 1.00 8.31 ATOM 295 CD GLU 32 -1.497 45.460 16.461 1.00 8.31 ATOM 296 CG GLU 32 -2.905 45.312 17.001 1.00 8.31 ATOM 297 OE1 GLU 32 -1.263 45.074 15.296 1.00 8.31 ATOM 298 OE2 GLU 32 -0.626 45.963 17.203 1.00 8.31 ATOM 299 N ARG 33 -7.190 45.101 14.987 1.00 8.14 ATOM 300 CA ARG 33 -8.234 44.668 14.111 1.00 8.14 ATOM 301 C ARG 33 -7.676 44.191 12.811 1.00 8.14 ATOM 302 O ARG 33 -8.131 43.181 12.277 1.00 8.14 ATOM 304 CB ARG 33 -9.236 45.800 13.872 1.00 8.14 ATOM 305 CD ARG 33 -11.265 47.028 14.693 1.00 8.14 ATOM 307 NE ARG 33 -10.809 48.326 14.202 1.00 8.14 ATOM 308 CG ARG 33 -10.105 46.124 15.077 1.00 8.14 ATOM 309 CZ ARG 33 -10.567 49.376 14.982 1.00 8.14 ATOM 312 NH1 ARG 33 -10.154 50.517 14.447 1.00 8.14 ATOM 315 NH2 ARG 33 -10.737 49.281 16.293 1.00 8.14 ATOM 316 N PRO 34 -6.708 44.869 12.273 1.00 8.77 ATOM 317 CA PRO 34 -6.247 44.437 10.984 1.00 8.77 ATOM 318 C PRO 34 -5.448 43.176 10.935 1.00 8.77 ATOM 319 O PRO 34 -4.473 43.047 11.676 1.00 8.77 ATOM 320 CB PRO 34 -5.373 45.595 10.496 1.00 8.77 ATOM 321 CD PRO 34 -6.231 46.253 12.632 1.00 8.77 ATOM 322 CG PRO 34 -5.849 46.775 11.274 1.00 8.77 ATOM 323 N PHE 35 -5.838 42.253 10.035 1.00 7.48 ATOM 324 CA PHE 35 -5.068 41.081 9.746 1.00 7.48 ATOM 325 C PHE 35 -4.784 41.240 8.292 1.00 7.48 ATOM 326 O PHE 35 -5.713 41.334 7.491 1.00 7.48 ATOM 328 CB PHE 35 -5.855 39.820 10.108 1.00 7.48 ATOM 329 CG PHE 35 -6.162 39.697 11.573 1.00 7.48 ATOM 330 CZ PHE 35 -6.733 39.464 14.284 1.00 7.48 ATOM 331 CD1 PHE 35 -5.517 40.497 12.500 1.00 7.48 ATOM 332 CE1 PHE 35 -5.799 40.384 13.848 1.00 7.48 ATOM 333 CD2 PHE 35 -7.095 38.781 12.026 1.00 7.48 ATOM 334 CE2 PHE 35 -7.376 38.668 13.374 1.00 7.48 ATOM 335 N TRP 36 -3.505 41.298 7.892 1.00 7.53 ATOM 336 CA TRP 36 -3.294 41.447 6.485 1.00 7.53 ATOM 337 C TRP 36 -2.539 40.271 5.977 1.00 7.53 ATOM 338 O TRP 36 -1.520 39.868 6.535 1.00 7.53 ATOM 340 CB TRP 36 -2.549 42.750 6.190 1.00 7.53 ATOM 343 CG TRP 36 -3.348 43.980 6.493 1.00 7.53 ATOM 344 CD1 TRP 36 -4.515 44.047 7.198 1.00 7.53 ATOM 346 NE1 TRP 36 -4.953 45.347 7.270 1.00 7.53 ATOM 347 CD2 TRP 36 -3.038 45.323 6.100 1.00 7.53 ATOM 348 CE2 TRP 36 -4.060 46.149 6.602 1.00 7.53 ATOM 349 CH2 TRP 36 -3.042 48.072 5.686 1.00 7.53 ATOM 350 CZ2 TRP 36 -4.073 47.528 6.400 1.00 7.53 ATOM 351 CE3 TRP 36 -1.996 45.907 5.373 1.00 7.53 ATOM 352 CZ3 TRP 36 -2.012 47.275 5.176 1.00 7.53 ATOM 353 N ILE 37 -3.046 39.678 4.881 1.00 7.23 ATOM 354 CA ILE 37 -2.405 38.517 4.351 1.00 7.23 ATOM 355 C ILE 37 -1.968 38.757 2.949 1.00 7.23 ATOM 356 O ILE 37 -2.735 39.221 2.107 1.00 7.23 ATOM 358 CB ILE 37 -3.327 37.284 4.417 1.00 7.23 ATOM 359 CD1 ILE 37 -2.655 36.702 6.805 1.00 7.23 ATOM 360 CG1 ILE 37 -3.784 37.036 5.856 1.00 7.23 ATOM 361 CG2 ILE 37 -2.632 36.068 3.824 1.00 7.23 ATOM 362 N SER 38 -0.696 38.403 2.675 1.00 7.73 ATOM 363 CA SER 38 -0.070 38.628 1.406 1.00 7.73 ATOM 364 C SER 38 -0.594 37.674 0.387 1.00 7.73 ATOM 365 O SER 38 -1.219 36.664 0.706 1.00 7.73 ATOM 367 CB SER 38 1.449 38.497 1.526 1.00 7.73 ATOM 369 OG SER 38 1.826 37.158 1.796 1.00 7.73 ATOM 370 N SER 39 -0.351 38.009 -0.898 1.00 8.03 ATOM 371 CA SER 39 -0.764 37.170 -1.980 1.00 8.03 ATOM 372 C SER 39 -0.006 35.892 -1.875 1.00 8.03 ATOM 373 O SER 39 -0.544 34.822 -2.151 1.00 8.03 ATOM 375 CB SER 39 -0.525 37.867 -3.321 1.00 8.03 ATOM 377 OG SER 39 -1.356 39.007 -3.459 1.00 8.03 ATOM 378 N PHE 40 1.276 35.962 -1.468 1.00 7.56 ATOM 379 CA PHE 40 1.995 34.730 -1.358 1.00 7.56 ATOM 380 C PHE 40 1.958 34.302 0.068 1.00 7.56 ATOM 381 O PHE 40 2.706 34.800 0.909 1.00 7.56 ATOM 383 CB PHE 40 3.430 34.901 -1.862 1.00 7.56 ATOM 384 CG PHE 40 3.525 35.191 -3.333 1.00 7.56 ATOM 385 CZ PHE 40 3.701 35.722 -6.055 1.00 7.56 ATOM 386 CD1 PHE 40 3.546 36.496 -3.796 1.00 7.56 ATOM 387 CE1 PHE 40 3.634 36.763 -5.148 1.00 7.56 ATOM 388 CD2 PHE 40 3.593 34.161 -4.254 1.00 7.56 ATOM 389 CE2 PHE 40 3.681 34.428 -5.607 1.00 7.56 ATOM 390 N ILE 41 1.068 33.339 0.366 1.00 7.09 ATOM 391 CA ILE 41 0.933 32.850 1.702 1.00 7.09 ATOM 392 C ILE 41 0.968 31.362 1.673 1.00 7.09 ATOM 393 O ILE 41 0.302 30.724 0.859 1.00 7.09 ATOM 395 CB ILE 41 -0.360 33.362 2.363 1.00 7.09 ATOM 396 CD1 ILE 41 0.694 35.514 3.234 1.00 7.09 ATOM 397 CG1 ILE 41 -0.385 34.892 2.373 1.00 7.09 ATOM 398 CG2 ILE 41 -0.510 32.784 3.761 1.00 7.09 ATOM 399 N GLY 42 1.788 30.781 2.566 1.00 7.48 ATOM 400 CA GLY 42 1.903 29.359 2.688 1.00 7.48 ATOM 401 C GLY 42 0.628 28.798 3.238 1.00 7.48 ATOM 402 O GLY 42 0.183 27.728 2.827 1.00 7.48 ATOM 404 N ARG 43 0.015 29.512 4.201 1.00 7.26 ATOM 405 CA ARG 43 -1.148 29.021 4.887 1.00 7.26 ATOM 406 C ARG 43 -2.378 29.181 4.054 1.00 7.26 ATOM 407 O ARG 43 -2.394 29.896 3.054 1.00 7.26 ATOM 409 CB ARG 43 -1.325 29.742 6.225 1.00 7.26 ATOM 410 CD ARG 43 0.099 28.218 7.621 1.00 7.26 ATOM 412 NE ARG 43 -1.057 27.699 8.347 1.00 7.26 ATOM 413 CG ARG 43 -0.121 29.646 7.147 1.00 7.26 ATOM 414 CZ ARG 43 -1.213 26.425 8.691 1.00 7.26 ATOM 417 NH1 ARG 43 -2.298 26.043 9.350 1.00 7.26 ATOM 420 NH2 ARG 43 -0.282 25.534 8.375 1.00 7.26 ATOM 421 N SER 44 -3.449 28.478 4.482 1.00 7.79 ATOM 422 CA SER 44 -4.714 28.406 3.809 1.00 7.79 ATOM 423 C SER 44 -5.422 29.718 3.880 1.00 7.79 ATOM 424 O SER 44 -5.075 30.595 4.669 1.00 7.79 ATOM 426 CB SER 44 -5.581 27.300 4.414 1.00 7.79 ATOM 428 OG SER 44 -5.978 27.627 5.734 1.00 7.79 ATOM 429 N LYS 45 -6.442 29.873 3.011 1.00 7.38 ATOM 430 CA LYS 45 -7.193 31.088 2.930 1.00 7.38 ATOM 431 C LYS 45 -7.967 31.303 4.189 1.00 7.38 ATOM 432 O LYS 45 -8.074 32.429 4.671 1.00 7.38 ATOM 434 CB LYS 45 -8.132 31.058 1.723 1.00 7.38 ATOM 435 CD LYS 45 -8.409 31.094 -0.772 1.00 7.38 ATOM 436 CE LYS 45 -7.698 31.180 -2.113 1.00 7.38 ATOM 437 CG LYS 45 -7.421 31.142 0.382 1.00 7.38 ATOM 441 NZ LYS 45 -8.651 31.092 -3.253 1.00 7.38 TER END