####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS023_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS023_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 17 - 37 4.67 11.18 LONGEST_CONTINUOUS_SEGMENT: 21 18 - 38 4.76 10.75 LCS_AVERAGE: 43.13 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.97 9.92 LCS_AVERAGE: 18.70 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.49 10.59 LCS_AVERAGE: 14.57 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 9 3 7 12 13 13 14 14 15 15 16 17 18 19 20 23 25 27 28 29 32 LCS_GDT V 3 V 3 4 6 9 3 4 4 5 6 14 14 15 15 16 17 19 19 21 24 27 29 30 34 35 LCS_GDT Q 4 Q 4 4 6 15 3 4 4 5 6 7 7 8 9 10 13 17 20 21 24 26 29 31 34 35 LCS_GDT G 5 G 5 4 6 19 0 4 4 5 6 7 7 8 9 12 12 16 18 19 21 26 27 31 34 35 LCS_GDT P 6 P 6 4 6 19 2 3 4 5 6 7 8 10 12 14 15 16 18 19 23 26 26 31 34 35 LCS_GDT W 7 W 7 4 6 19 0 3 4 5 6 7 8 10 12 14 15 17 18 21 24 28 29 31 34 35 LCS_GDT V 8 V 8 3 4 19 1 3 3 5 6 10 11 14 15 16 21 23 24 26 28 30 31 32 34 35 LCS_GDT G 9 G 9 8 10 19 5 7 8 11 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT S 10 S 10 8 10 19 5 7 8 9 10 11 12 14 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT S 11 S 11 8 10 19 5 7 8 9 10 11 11 14 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT Y 12 Y 12 8 10 19 5 7 8 9 10 11 11 14 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT V 13 V 13 8 10 19 5 7 8 9 10 11 11 14 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT A 14 A 14 8 10 19 5 7 8 9 10 11 11 15 16 18 19 21 24 26 28 30 31 32 34 35 LCS_GDT E 15 E 15 8 10 19 4 4 7 9 10 11 11 15 16 18 19 21 22 24 26 26 30 32 33 33 LCS_GDT T 16 T 16 8 10 19 4 7 8 9 10 11 11 15 16 18 19 21 24 26 28 30 31 32 34 35 LCS_GDT G 17 G 17 4 10 21 4 4 4 5 8 9 10 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT Q 18 Q 18 4 10 21 5 6 8 9 10 11 11 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT N 19 N 19 4 11 21 3 4 4 8 10 10 12 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT W 20 W 20 10 11 21 9 10 12 13 13 14 14 15 16 18 19 21 24 25 28 30 31 32 34 35 LCS_GDT A 21 A 21 10 11 21 9 10 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT S 22 S 22 10 11 21 9 10 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT L 23 L 23 10 11 21 9 10 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT A 24 A 24 10 11 21 9 10 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT A 25 A 25 10 11 21 9 10 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT N 26 N 26 10 11 21 9 10 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT E 27 E 27 10 11 21 9 10 12 13 13 14 14 15 16 17 21 23 24 26 28 30 31 32 34 35 LCS_GDT L 28 L 28 10 11 21 9 10 12 13 13 14 14 15 15 16 19 22 24 25 28 30 31 32 34 35 LCS_GDT R 29 R 29 10 11 21 4 10 12 13 13 14 14 15 16 17 19 22 24 25 28 29 31 32 34 35 LCS_GDT V 30 V 30 5 6 21 4 5 5 5 6 9 12 14 16 17 21 23 24 26 28 30 31 32 34 35 LCS_GDT T 31 T 31 5 6 21 4 5 5 6 7 9 12 14 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT E 32 E 32 5 6 21 4 5 5 6 7 9 12 14 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT R 33 R 33 5 6 21 4 5 5 5 5 9 12 15 16 18 20 23 24 26 28 30 31 32 34 35 LCS_GDT P 34 P 34 5 6 21 4 5 5 5 5 9 12 15 16 18 18 21 22 25 27 28 29 32 33 35 LCS_GDT F 35 F 35 3 4 21 0 3 4 5 6 8 11 15 16 18 20 22 24 26 28 30 31 32 34 35 LCS_GDT W 36 W 36 6 7 21 4 4 6 7 10 10 10 13 15 18 20 23 24 26 28 30 31 32 34 35 LCS_GDT I 37 I 37 6 7 21 4 4 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT S 38 S 38 6 7 21 4 8 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT S 39 S 39 6 7 16 4 4 6 8 10 10 11 15 16 18 19 22 24 26 28 30 31 32 33 34 LCS_GDT F 40 F 40 6 7 16 4 4 6 8 10 10 11 15 16 18 19 21 22 25 28 30 31 32 33 33 LCS_GDT I 41 I 41 6 7 16 4 4 6 8 10 11 12 12 14 17 19 21 22 24 26 27 29 31 33 33 LCS_GDT G 42 G 42 4 7 16 3 4 5 5 7 9 11 11 13 15 17 21 22 23 26 27 28 29 31 32 LCS_GDT R 43 R 43 4 6 16 3 4 5 5 6 6 7 11 13 15 17 17 21 22 24 27 28 29 30 31 LCS_GDT S 44 S 44 4 6 16 3 4 5 5 6 6 7 8 11 13 14 14 15 16 16 23 24 25 29 29 LCS_GDT K 45 K 45 3 6 16 3 3 5 5 6 6 7 7 9 10 11 13 15 16 16 23 24 25 29 29 LCS_AVERAGE LCS_A: 25.46 ( 14.57 18.70 43.13 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 10 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 GDT PERCENT_AT 20.45 22.73 27.27 29.55 29.55 31.82 31.82 34.09 36.36 40.91 47.73 52.27 54.55 59.09 63.64 68.18 70.45 72.73 77.27 79.55 GDT RMS_LOCAL 0.21 0.49 0.91 1.01 1.01 1.30 1.30 1.68 3.30 3.54 4.10 4.40 4.50 4.78 5.11 5.38 5.53 5.68 6.50 6.58 GDT RMS_ALL_AT 10.63 10.59 10.57 10.61 10.61 10.70 10.70 10.43 12.17 12.21 9.38 9.67 9.81 9.93 9.48 9.65 9.53 9.67 9.88 9.98 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 1.333 0 0.631 0.602 4.549 36.364 39.273 - LGA V 3 V 3 3.489 0 0.118 1.222 5.630 17.273 23.117 2.709 LGA Q 4 Q 4 9.180 0 0.645 1.486 13.479 0.000 0.000 11.407 LGA G 5 G 5 13.244 0 0.024 0.024 13.244 0.000 0.000 - LGA P 6 P 6 13.174 0 0.682 0.595 16.767 0.000 0.000 16.767 LGA W 7 W 7 7.461 0 0.460 0.992 11.540 0.000 0.000 10.798 LGA V 8 V 8 5.586 0 0.656 0.601 8.121 7.273 4.156 5.475 LGA G 9 G 9 3.795 0 0.535 0.535 7.559 4.091 4.091 - LGA S 10 S 10 10.676 0 0.107 0.688 14.133 0.000 0.000 13.073 LGA S 11 S 11 14.335 0 0.021 0.600 16.166 0.000 0.000 15.285 LGA Y 12 Y 12 12.042 0 0.107 1.123 13.507 0.000 0.000 8.572 LGA V 13 V 13 11.818 0 0.063 0.176 15.726 0.000 0.000 13.486 LGA A 14 A 14 19.153 0 0.083 0.078 21.710 0.000 0.000 - LGA E 15 E 15 21.332 0 0.163 0.871 27.642 0.000 0.000 27.419 LGA T 16 T 16 16.687 0 0.098 0.185 17.946 0.000 0.000 13.865 LGA G 17 G 17 13.292 0 0.131 0.131 14.429 0.000 0.000 - LGA Q 18 Q 18 10.807 0 0.624 1.225 15.104 0.000 0.000 13.625 LGA N 19 N 19 6.772 0 0.093 0.272 10.742 1.364 0.682 9.561 LGA W 20 W 20 0.453 0 0.616 1.313 9.590 80.000 24.286 9.590 LGA A 21 A 21 0.667 0 0.063 0.062 1.300 95.455 89.455 - LGA S 22 S 22 1.099 0 0.061 0.627 2.099 77.727 66.667 2.099 LGA L 23 L 23 1.292 0 0.041 1.136 6.513 69.545 41.364 6.107 LGA A 24 A 24 1.041 0 0.028 0.035 1.244 73.636 72.000 - LGA A 25 A 25 0.527 0 0.024 0.032 0.621 90.909 89.091 - LGA N 26 N 26 0.448 0 0.046 0.930 3.920 90.909 61.818 3.565 LGA E 27 E 27 1.469 0 0.042 0.774 5.521 61.818 37.980 5.521 LGA L 28 L 28 1.582 0 0.185 0.979 6.111 70.000 40.000 6.111 LGA R 29 R 29 1.034 0 0.314 1.525 10.597 40.909 25.124 10.597 LGA V 30 V 30 7.936 0 0.592 0.499 11.959 0.000 0.000 11.959 LGA T 31 T 31 10.516 0 0.151 0.281 14.400 0.000 0.000 12.305 LGA E 32 E 32 14.313 0 0.173 1.092 16.211 0.000 0.000 16.211 LGA R 33 R 33 14.502 0 0.045 0.828 18.127 0.000 0.000 13.558 LGA P 34 P 34 14.628 0 0.137 0.162 16.042 0.000 0.000 16.042 LGA F 35 F 35 12.131 0 0.600 0.978 15.192 0.000 0.000 14.768 LGA W 36 W 36 8.694 0 0.621 1.482 12.091 0.000 0.000 10.718 LGA I 37 I 37 1.795 0 0.099 0.957 4.564 47.727 33.182 2.808 LGA S 38 S 38 0.370 0 0.108 0.625 4.164 49.545 40.303 4.164 LGA S 39 S 39 7.284 0 0.162 0.701 10.501 0.455 0.303 10.094 LGA F 40 F 40 9.078 0 0.114 1.758 12.653 0.000 0.000 9.051 LGA I 41 I 41 10.426 0 0.606 1.511 12.375 0.000 0.000 11.184 LGA G 42 G 42 13.942 0 0.097 0.097 15.412 0.000 0.000 - LGA R 43 R 43 12.615 0 0.051 1.215 13.542 0.000 0.000 8.930 LGA S 44 S 44 16.108 0 0.030 0.658 17.323 0.000 0.000 16.652 LGA K 45 K 45 17.200 0 0.029 1.092 26.176 0.000 0.000 26.176 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.080 9.057 10.225 20.795 15.747 3.117 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 1.68 38.636 33.074 0.841 LGA_LOCAL RMSD: 1.684 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.428 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.080 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.756921 * X + -0.031485 * Y + 0.652747 * Z + 12.388803 Y_new = 0.604056 * X + -0.414856 * Y + 0.680449 * Z + 34.816387 Z_new = 0.249372 * X + 0.909342 * Y + 0.333032 * Z + 9.430206 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.468045 -0.252031 1.219733 [DEG: 141.4086 -14.4403 69.8856 ] ZXZ: 2.376970 1.231279 0.267653 [DEG: 136.1903 70.5471 15.3354 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS023_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS023_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 1.68 33.074 9.08 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS023_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 9 N ALA 2 11.343 37.007 13.148 1.00 10.00 ATOM 10 CA ALA 2 10.854 36.972 14.490 1.00 10.00 ATOM 11 CB ALA 2 10.360 38.346 14.975 1.00 10.00 ATOM 12 C ALA 2 9.698 36.015 14.572 1.00 10.00 ATOM 13 O ALA 2 9.493 35.376 15.602 1.00 10.00 ATOM 14 N VAL 3 8.871 35.917 13.512 1.00 10.60 ATOM 15 CA VAL 3 7.743 35.025 13.599 1.00 10.60 ATOM 16 CB VAL 3 6.573 35.460 12.759 1.00 10.60 ATOM 17 CG1 VAL 3 7.028 35.640 11.300 1.00 10.60 ATOM 18 CG2 VAL 3 5.449 34.424 12.930 1.00 10.60 ATOM 19 C VAL 3 8.167 33.642 13.179 1.00 10.60 ATOM 20 O VAL 3 8.386 33.363 12.001 1.00 10.60 ATOM 21 N GLN 4 8.296 32.741 14.174 1.00 9.53 ATOM 22 CA GLN 4 8.777 31.392 14.004 1.00 9.53 ATOM 23 CB GLN 4 9.123 30.704 15.343 1.00 9.53 ATOM 24 CG GLN 4 9.789 29.325 15.202 1.00 9.53 ATOM 25 CD GLN 4 8.721 28.259 14.970 1.00 9.53 ATOM 26 OE1 GLN 4 8.728 27.585 13.940 1.00 9.53 ATOM 27 NE2 GLN 4 7.784 28.096 15.944 1.00 9.53 ATOM 28 C GLN 4 7.798 30.501 13.298 1.00 9.53 ATOM 29 O GLN 4 8.203 29.643 12.514 1.00 9.53 ATOM 30 N GLY 5 6.491 30.664 13.576 1.00 9.15 ATOM 31 CA GLY 5 5.509 29.752 13.051 1.00 9.15 ATOM 32 C GLY 5 5.232 30.037 11.606 1.00 9.15 ATOM 33 O GLY 5 5.613 31.061 11.042 1.00 9.15 ATOM 34 N PRO 6 4.512 29.105 11.031 1.00 9.56 ATOM 35 CA PRO 6 4.165 29.137 9.633 1.00 9.56 ATOM 36 CD PRO 6 3.577 28.305 11.804 1.00 9.56 ATOM 37 CB PRO 6 3.168 28.000 9.431 1.00 9.56 ATOM 38 CG PRO 6 2.482 27.896 10.805 1.00 9.56 ATOM 39 C PRO 6 3.555 30.461 9.309 1.00 9.56 ATOM 40 O PRO 6 2.716 30.941 10.065 1.00 9.56 ATOM 41 N TRP 7 3.948 31.052 8.170 1.00 10.85 ATOM 42 CA TRP 7 3.514 32.364 7.808 1.00 10.85 ATOM 43 CB TRP 7 4.556 33.098 6.964 1.00 10.85 ATOM 44 CG TRP 7 5.844 33.205 7.733 1.00 10.85 ATOM 45 CD2 TRP 7 7.103 33.597 7.178 1.00 10.85 ATOM 46 CD1 TRP 7 6.070 32.919 9.048 1.00 10.85 ATOM 47 NE1 TRP 7 7.397 33.099 9.345 1.00 10.85 ATOM 48 CE2 TRP 7 8.046 33.520 8.204 1.00 10.85 ATOM 49 CE3 TRP 7 7.449 33.984 5.912 1.00 10.85 ATOM 50 CZ2 TRP 7 9.354 33.829 7.982 1.00 10.85 ATOM 51 CZ3 TRP 7 8.769 34.304 5.695 1.00 10.85 ATOM 52 CH2 TRP 7 9.702 34.229 6.709 1.00 10.85 ATOM 53 C TRP 7 2.234 32.277 7.050 1.00 10.85 ATOM 54 O TRP 7 1.809 31.212 6.609 1.00 10.85 ATOM 55 N VAL 8 1.562 33.431 6.937 1.00 11.23 ATOM 56 CA VAL 8 0.316 33.558 6.255 1.00 11.23 ATOM 57 CB VAL 8 -0.414 34.766 6.764 1.00 11.23 ATOM 58 CG1 VAL 8 -1.577 35.088 5.845 1.00 11.23 ATOM 59 CG2 VAL 8 -0.889 34.452 8.195 1.00 11.23 ATOM 60 C VAL 8 0.580 33.633 4.777 1.00 11.23 ATOM 61 O VAL 8 1.697 33.925 4.350 1.00 11.23 ATOM 62 N GLY 9 -0.443 33.322 3.947 1.00 10.34 ATOM 63 CA GLY 9 -0.289 33.385 2.516 1.00 10.34 ATOM 64 C GLY 9 -1.474 34.096 1.940 1.00 10.34 ATOM 65 O GLY 9 -2.556 34.106 2.525 1.00 10.34 ATOM 66 N SER 10 -1.284 34.734 0.767 1.00 10.16 ATOM 67 CA SER 10 -2.350 35.455 0.139 1.00 10.16 ATOM 68 CB SER 10 -1.875 36.353 -1.011 1.00 10.16 ATOM 69 OG SER 10 -2.986 37.025 -1.587 1.00 10.16 ATOM 70 C SER 10 -3.398 34.511 -0.357 1.00 10.16 ATOM 71 O SER 10 -4.588 34.739 -0.155 1.00 10.16 ATOM 72 N SER 11 -2.986 33.425 -1.039 1.00 9.39 ATOM 73 CA SER 11 -3.939 32.482 -1.555 1.00 9.39 ATOM 74 CB SER 11 -3.325 31.464 -2.538 1.00 9.39 ATOM 75 OG SER 11 -2.416 30.607 -1.864 1.00 9.39 ATOM 76 C SER 11 -4.554 31.704 -0.436 1.00 9.39 ATOM 77 O SER 11 -5.761 31.458 -0.429 1.00 9.39 ATOM 78 N TYR 12 -3.743 31.295 0.559 1.00 9.52 ATOM 79 CA TYR 12 -4.332 30.437 1.537 1.00 9.52 ATOM 80 CB TYR 12 -3.348 29.772 2.517 1.00 9.52 ATOM 81 CG TYR 12 -4.031 28.533 3.017 1.00 9.52 ATOM 82 CD1 TYR 12 -4.282 27.496 2.141 1.00 9.52 ATOM 83 CD2 TYR 12 -4.389 28.371 4.336 1.00 9.52 ATOM 84 CE1 TYR 12 -4.903 26.336 2.551 1.00 9.52 ATOM 85 CE2 TYR 12 -5.008 27.215 4.755 1.00 9.52 ATOM 86 CZ TYR 12 -5.265 26.196 3.870 1.00 9.52 ATOM 87 OH TYR 12 -5.901 25.019 4.323 1.00 9.52 ATOM 88 C TYR 12 -5.362 31.199 2.288 1.00 9.52 ATOM 89 O TYR 12 -6.474 30.709 2.427 1.00 9.52 ATOM 90 N VAL 13 -5.059 32.448 2.691 1.00 9.67 ATOM 91 CA VAL 13 -5.915 33.216 3.552 1.00 9.67 ATOM 92 CB VAL 13 -5.376 34.573 3.845 1.00 9.67 ATOM 93 CG1 VAL 13 -6.468 35.413 4.530 1.00 9.67 ATOM 94 CG2 VAL 13 -4.161 34.350 4.733 1.00 9.67 ATOM 95 C VAL 13 -7.278 33.429 3.000 1.00 9.67 ATOM 96 O VAL 13 -8.240 33.390 3.764 1.00 9.67 ATOM 97 N ALA 14 -7.419 33.657 1.682 1.00 8.94 ATOM 98 CA ALA 14 -8.719 34.059 1.227 1.00 8.94 ATOM 99 CB ALA 14 -8.762 34.320 -0.289 1.00 8.94 ATOM 100 C ALA 14 -9.778 33.041 1.542 1.00 8.94 ATOM 101 O ALA 14 -10.754 33.378 2.210 1.00 8.94 ATOM 102 N GLU 15 -9.648 31.781 1.079 1.00 9.14 ATOM 103 CA GLU 15 -10.676 30.839 1.434 1.00 9.14 ATOM 104 CB GLU 15 -10.684 29.650 0.454 1.00 9.14 ATOM 105 CG GLU 15 -10.803 30.061 -1.019 1.00 9.14 ATOM 106 CD GLU 15 -12.239 30.471 -1.314 1.00 9.14 ATOM 107 OE1 GLU 15 -13.113 30.256 -0.432 1.00 9.14 ATOM 108 OE2 GLU 15 -12.484 30.999 -2.431 1.00 9.14 ATOM 109 C GLU 15 -10.475 30.254 2.817 1.00 9.14 ATOM 110 O GLU 15 -11.220 30.531 3.756 1.00 9.14 ATOM 111 N THR 16 -9.406 29.429 2.932 1.00 8.20 ATOM 112 CA THR 16 -8.988 28.600 4.044 1.00 8.20 ATOM 113 CB THR 16 -8.090 27.514 3.563 1.00 8.20 ATOM 114 OG1 THR 16 -7.021 28.097 2.836 1.00 8.20 ATOM 115 CG2 THR 16 -8.902 26.569 2.663 1.00 8.20 ATOM 116 C THR 16 -8.274 29.323 5.138 1.00 8.20 ATOM 117 O THR 16 -8.408 29.014 6.320 1.00 8.20 ATOM 118 N GLY 17 -7.498 30.321 4.731 1.00 11.04 ATOM 119 CA GLY 17 -6.531 31.064 5.460 1.00 11.04 ATOM 120 C GLY 17 -7.151 31.778 6.593 1.00 11.04 ATOM 121 O GLY 17 -6.422 32.135 7.492 1.00 11.04 ATOM 122 N GLN 18 -8.459 32.075 6.600 1.00 7.51 ATOM 123 CA GLN 18 -8.973 32.859 7.695 1.00 7.51 ATOM 124 CB GLN 18 -10.496 33.053 7.655 1.00 7.51 ATOM 125 CG GLN 18 -11.019 33.891 8.825 1.00 7.51 ATOM 126 CD GLN 18 -12.536 33.921 8.744 1.00 7.51 ATOM 127 OE1 GLN 18 -13.185 34.843 9.238 1.00 7.51 ATOM 128 NE2 GLN 18 -13.124 32.873 8.108 1.00 7.51 ATOM 129 C GLN 18 -8.643 32.181 8.998 1.00 7.51 ATOM 130 O GLN 18 -8.336 32.844 9.988 1.00 7.51 ATOM 131 N ASN 19 -8.684 30.838 9.020 1.00 7.61 ATOM 132 CA ASN 19 -8.304 30.103 10.192 1.00 7.61 ATOM 133 CB ASN 19 -8.505 28.585 10.015 1.00 7.61 ATOM 134 CG ASN 19 -9.957 28.293 9.660 1.00 7.61 ATOM 135 OD1 ASN 19 -10.400 28.626 8.562 1.00 7.61 ATOM 136 ND2 ASN 19 -10.708 27.644 10.592 1.00 7.61 ATOM 137 C ASN 19 -6.826 30.271 10.420 1.00 7.61 ATOM 138 O ASN 19 -6.383 30.553 11.534 1.00 7.61 ATOM 139 N TRP 20 -6.024 30.098 9.344 1.00 7.50 ATOM 140 CA TRP 20 -4.587 30.085 9.455 1.00 7.50 ATOM 141 CB TRP 20 -3.845 29.707 8.169 1.00 7.50 ATOM 142 CG TRP 20 -2.440 29.259 8.483 1.00 7.50 ATOM 143 CD2 TRP 20 -2.066 27.876 8.570 1.00 7.50 ATOM 144 CD1 TRP 20 -1.314 29.983 8.748 1.00 7.50 ATOM 145 NE1 TRP 20 -0.260 29.134 9.003 1.00 7.50 ATOM 146 CE2 TRP 20 -0.711 27.833 8.893 1.00 7.50 ATOM 147 CE3 TRP 20 -2.795 26.738 8.389 1.00 7.50 ATOM 148 CZ2 TRP 20 -0.063 26.638 9.050 1.00 7.50 ATOM 149 CZ3 TRP 20 -2.142 25.537 8.546 1.00 7.50 ATOM 150 CH2 TRP 20 -0.802 25.488 8.870 1.00 7.50 ATOM 151 C TRP 20 -4.070 31.444 9.834 1.00 7.50 ATOM 152 O TRP 20 -3.107 31.578 10.581 1.00 7.50 ATOM 153 N ALA 21 -4.673 32.481 9.244 1.00 7.42 ATOM 154 CA ALA 21 -4.447 33.879 9.398 1.00 7.42 ATOM 155 CB ALA 21 -5.362 34.733 8.504 1.00 7.42 ATOM 156 C ALA 21 -4.781 34.211 10.808 1.00 7.42 ATOM 157 O ALA 21 -4.098 35.005 11.448 1.00 7.42 ATOM 158 N SER 22 -5.858 33.594 11.327 1.00 7.62 ATOM 159 CA SER 22 -6.293 33.833 12.673 1.00 7.62 ATOM 160 CB SER 22 -7.522 32.980 13.040 1.00 7.62 ATOM 161 OG SER 22 -7.850 33.136 14.414 1.00 7.62 ATOM 162 C SER 22 -5.205 33.432 13.617 1.00 7.62 ATOM 163 O SER 22 -4.819 34.194 14.504 1.00 7.62 ATOM 164 N LEU 23 -4.662 32.217 13.432 1.00 7.84 ATOM 165 CA LEU 23 -3.696 31.705 14.359 1.00 7.84 ATOM 166 CB LEU 23 -3.327 30.225 14.099 1.00 7.84 ATOM 167 CG LEU 23 -2.225 29.934 13.051 1.00 7.84 ATOM 168 CD1 LEU 23 -0.811 30.220 13.589 1.00 7.84 ATOM 169 CD2 LEU 23 -2.332 28.497 12.512 1.00 7.84 ATOM 170 C LEU 23 -2.457 32.544 14.317 1.00 7.84 ATOM 171 O LEU 23 -1.838 32.804 15.348 1.00 7.84 ATOM 172 N ALA 24 -2.062 32.988 13.111 1.00 7.69 ATOM 173 CA ALA 24 -0.861 33.753 12.940 1.00 7.69 ATOM 174 CB ALA 24 -0.576 34.091 11.468 1.00 7.69 ATOM 175 C ALA 24 -0.983 35.046 13.681 1.00 7.69 ATOM 176 O ALA 24 -0.027 35.512 14.301 1.00 7.69 ATOM 177 N ALA 25 -2.180 35.653 13.634 1.00 7.43 ATOM 178 CA ALA 25 -2.387 36.943 14.225 1.00 7.43 ATOM 179 CB ALA 25 -3.820 37.463 14.025 1.00 7.43 ATOM 180 C ALA 25 -2.136 36.880 15.700 1.00 7.43 ATOM 181 O ALA 25 -1.490 37.766 16.260 1.00 7.43 ATOM 182 N ASN 26 -2.624 35.820 16.372 1.00 6.79 ATOM 183 CA ASN 26 -2.481 35.738 17.798 1.00 6.79 ATOM 184 CB ASN 26 -3.203 34.565 18.470 1.00 6.79 ATOM 185 CG ASN 26 -3.215 34.923 19.952 1.00 6.79 ATOM 186 OD1 ASN 26 -2.897 36.054 20.314 1.00 6.79 ATOM 187 ND2 ASN 26 -3.577 33.954 20.834 1.00 6.79 ATOM 188 C ASN 26 -1.032 35.617 18.152 1.00 6.79 ATOM 189 O ASN 26 -0.611 36.081 19.209 1.00 6.79 ATOM 190 N GLU 27 -0.236 34.963 17.284 1.00 7.03 ATOM 191 CA GLU 27 1.171 34.772 17.515 1.00 7.03 ATOM 192 CB GLU 27 1.863 33.935 16.429 1.00 7.03 ATOM 193 CG GLU 27 1.450 32.461 16.419 1.00 7.03 ATOM 194 CD GLU 27 2.386 31.725 15.470 1.00 7.03 ATOM 195 OE1 GLU 27 3.406 32.341 15.061 1.00 7.03 ATOM 196 OE2 GLU 27 2.101 30.540 15.144 1.00 7.03 ATOM 197 C GLU 27 1.859 36.109 17.549 1.00 7.03 ATOM 198 O GLU 27 2.853 36.291 18.250 1.00 7.03 ATOM 199 N LEU 28 1.316 37.082 16.798 1.00 7.55 ATOM 200 CA LEU 28 1.816 38.422 16.642 1.00 7.55 ATOM 201 CB LEU 28 0.831 39.256 15.802 1.00 7.55 ATOM 202 CG LEU 28 1.216 40.724 15.560 1.00 7.55 ATOM 203 CD1 LEU 28 1.056 41.592 16.818 1.00 7.55 ATOM 204 CD2 LEU 28 2.602 40.820 14.927 1.00 7.55 ATOM 205 C LEU 28 1.906 39.041 18.002 1.00 7.55 ATOM 206 O LEU 28 2.749 39.905 18.242 1.00 7.55 ATOM 207 N ARG 29 1.030 38.604 18.922 1.00 8.07 ATOM 208 CA ARG 29 0.967 39.107 20.270 1.00 8.07 ATOM 209 CB ARG 29 -0.025 38.332 21.158 1.00 8.07 ATOM 210 CG ARG 29 0.021 38.753 22.631 1.00 8.07 ATOM 211 CD ARG 29 -0.845 37.892 23.554 1.00 8.07 ATOM 212 NE ARG 29 -2.265 38.108 23.161 1.00 8.07 ATOM 213 CZ ARG 29 -3.211 37.175 23.475 1.00 8.07 ATOM 214 NH1 ARG 29 -2.854 36.026 24.119 1.00 8.07 ATOM 215 NH2 ARG 29 -4.516 37.398 23.143 1.00 8.07 ATOM 216 C ARG 29 2.315 38.907 20.891 1.00 8.07 ATOM 217 O ARG 29 2.742 39.678 21.750 1.00 8.07 ATOM 218 N VAL 30 3.015 37.844 20.468 1.00 8.69 ATOM 219 CA VAL 30 4.314 37.462 20.947 1.00 8.69 ATOM 220 CB VAL 30 4.813 36.185 20.315 1.00 8.69 ATOM 221 CG1 VAL 30 6.214 35.874 20.861 1.00 8.69 ATOM 222 CG2 VAL 30 3.804 35.054 20.594 1.00 8.69 ATOM 223 C VAL 30 5.283 38.569 20.610 1.00 8.69 ATOM 224 O VAL 30 6.397 38.597 21.122 1.00 8.69 ATOM 225 N THR 31 4.866 39.494 19.718 1.00 8.06 ATOM 226 CA THR 31 5.572 40.639 19.183 1.00 8.06 ATOM 227 CB THR 31 6.382 41.453 20.164 1.00 8.06 ATOM 228 OG1 THR 31 7.584 40.794 20.535 1.00 8.06 ATOM 229 CG2 THR 31 5.513 41.729 21.405 1.00 8.06 ATOM 230 C THR 31 6.483 40.216 18.075 1.00 8.06 ATOM 231 O THR 31 7.356 40.973 17.651 1.00 8.06 ATOM 232 N GLU 32 6.279 38.990 17.560 1.00 8.34 ATOM 233 CA GLU 32 6.966 38.570 16.376 1.00 8.34 ATOM 234 CB GLU 32 7.388 37.087 16.425 1.00 8.34 ATOM 235 CG GLU 32 6.251 36.136 16.805 1.00 8.34 ATOM 236 CD GLU 32 6.765 34.714 16.649 1.00 8.34 ATOM 237 OE1 GLU 32 7.654 34.305 17.443 1.00 8.34 ATOM 238 OE2 GLU 32 6.277 34.019 15.718 1.00 8.34 ATOM 239 C GLU 32 5.973 38.753 15.268 1.00 8.34 ATOM 240 O GLU 32 5.112 37.904 15.048 1.00 8.34 ATOM 241 N ARG 33 6.073 39.879 14.531 1.00 8.66 ATOM 242 CA ARG 33 5.105 40.200 13.518 1.00 8.66 ATOM 243 CB ARG 33 5.141 41.691 13.129 1.00 8.66 ATOM 244 CG ARG 33 4.838 42.622 14.308 1.00 8.66 ATOM 245 CD ARG 33 4.700 44.096 13.923 1.00 8.66 ATOM 246 NE ARG 33 4.068 44.795 15.078 1.00 8.66 ATOM 247 CZ ARG 33 4.831 45.377 16.048 1.00 8.66 ATOM 248 NH1 ARG 33 6.192 45.385 15.942 1.00 8.66 ATOM 249 NH2 ARG 33 4.230 45.959 17.125 1.00 8.66 ATOM 250 C ARG 33 5.369 39.407 12.276 1.00 8.66 ATOM 251 O ARG 33 6.514 39.259 11.853 1.00 8.66 ATOM 252 N PRO 34 4.333 38.849 11.698 1.00 8.59 ATOM 253 CA PRO 34 4.531 38.159 10.449 1.00 8.59 ATOM 254 CD PRO 34 3.356 38.164 12.530 1.00 8.59 ATOM 255 CB PRO 34 3.380 37.181 10.308 1.00 8.59 ATOM 256 CG PRO 34 2.981 36.885 11.762 1.00 8.59 ATOM 257 C PRO 34 4.662 39.101 9.295 1.00 8.59 ATOM 258 O PRO 34 3.824 39.991 9.150 1.00 8.59 ATOM 259 N PHE 35 5.679 38.888 8.439 1.00 8.57 ATOM 260 CA PHE 35 5.902 39.682 7.266 1.00 8.57 ATOM 261 CB PHE 35 7.198 39.307 6.522 1.00 8.57 ATOM 262 CG PHE 35 7.252 40.091 5.250 1.00 8.57 ATOM 263 CD1 PHE 35 7.832 41.337 5.207 1.00 8.57 ATOM 264 CD2 PHE 35 6.716 39.580 4.086 1.00 8.57 ATOM 265 CE1 PHE 35 7.874 42.046 4.027 1.00 8.57 ATOM 266 CE2 PHE 35 6.754 40.285 2.905 1.00 8.57 ATOM 267 CZ PHE 35 7.339 41.526 2.871 1.00 8.57 ATOM 268 C PHE 35 4.784 39.449 6.300 1.00 8.57 ATOM 269 O PHE 35 4.313 40.396 5.672 1.00 8.57 ATOM 270 N TRP 36 4.343 38.180 6.123 1.00 8.60 ATOM 271 CA TRP 36 3.310 37.971 5.145 1.00 8.60 ATOM 272 CB TRP 36 2.883 36.542 4.776 1.00 8.60 ATOM 273 CG TRP 36 1.679 36.667 3.858 1.00 8.60 ATOM 274 CD2 TRP 36 1.710 37.204 2.521 1.00 8.60 ATOM 275 CD1 TRP 36 0.364 36.485 4.151 1.00 8.60 ATOM 276 NE1 TRP 36 -0.424 36.832 3.083 1.00 8.60 ATOM 277 CE2 TRP 36 0.389 37.291 2.076 1.00 8.60 ATOM 278 CE3 TRP 36 2.745 37.615 1.735 1.00 8.60 ATOM 279 CZ2 TRP 36 0.085 37.788 0.840 1.00 8.60 ATOM 280 CZ3 TRP 36 2.433 38.099 0.482 1.00 8.60 ATOM 281 CH2 TRP 36 1.131 38.185 0.042 1.00 8.60 ATOM 282 C TRP 36 2.066 38.675 5.574 1.00 8.60 ATOM 283 O TRP 36 1.326 39.208 4.749 1.00 8.60 ATOM 284 N ILE 37 1.783 38.678 6.886 1.00 8.21 ATOM 285 CA ILE 37 0.622 39.386 7.329 1.00 8.21 ATOM 286 CB ILE 37 0.423 39.305 8.812 1.00 8.21 ATOM 287 CG2 ILE 37 -0.512 40.443 9.248 1.00 8.21 ATOM 288 CG1 ILE 37 -0.094 37.908 9.177 1.00 8.21 ATOM 289 CD1 ILE 37 0.831 36.777 8.747 1.00 8.21 ATOM 290 C ILE 37 0.789 40.822 6.941 1.00 8.21 ATOM 291 O ILE 37 -0.159 41.457 6.486 1.00 8.21 ATOM 292 N SER 38 2.012 41.363 7.096 1.00 8.57 ATOM 293 CA SER 38 2.305 42.736 6.794 1.00 8.57 ATOM 294 CB SER 38 3.792 43.072 6.998 1.00 8.57 ATOM 295 OG SER 38 4.162 42.856 8.353 1.00 8.57 ATOM 296 C SER 38 2.005 43.001 5.353 1.00 8.57 ATOM 297 O SER 38 1.487 44.061 5.016 1.00 8.57 ATOM 298 N SER 39 2.344 42.066 4.451 1.00 7.75 ATOM 299 CA SER 39 2.066 42.277 3.058 1.00 7.75 ATOM 300 CB SER 39 2.674 41.190 2.153 1.00 7.75 ATOM 301 OG SER 39 4.091 41.230 2.219 1.00 7.75 ATOM 302 C SER 39 0.581 42.264 2.845 1.00 7.75 ATOM 303 O SER 39 0.050 43.055 2.067 1.00 7.75 ATOM 304 N PHE 40 -0.130 41.361 3.549 1.00 7.80 ATOM 305 CA PHE 40 -1.553 41.230 3.411 1.00 7.80 ATOM 306 CB PHE 40 -2.117 40.172 4.377 1.00 7.80 ATOM 307 CG PHE 40 -3.589 40.362 4.486 1.00 7.80 ATOM 308 CD1 PHE 40 -4.454 39.802 3.576 1.00 7.80 ATOM 309 CD2 PHE 40 -4.102 41.112 5.520 1.00 7.80 ATOM 310 CE1 PHE 40 -5.810 39.993 3.701 1.00 7.80 ATOM 311 CE2 PHE 40 -5.455 41.304 5.649 1.00 7.80 ATOM 312 CZ PHE 40 -6.313 40.741 4.737 1.00 7.80 ATOM 313 C PHE 40 -2.179 42.536 3.773 1.00 7.80 ATOM 314 O PHE 40 -3.027 43.049 3.044 1.00 7.80 ATOM 315 N ILE 41 -1.764 43.086 4.931 1.00 7.83 ATOM 316 CA ILE 41 -2.238 44.314 5.507 1.00 7.83 ATOM 317 CB ILE 41 -1.786 44.493 6.932 1.00 7.83 ATOM 318 CG2 ILE 41 -0.293 44.863 6.934 1.00 7.83 ATOM 319 CG1 ILE 41 -2.672 45.520 7.652 1.00 7.83 ATOM 320 CD1 ILE 41 -4.104 45.023 7.867 1.00 7.83 ATOM 321 C ILE 41 -1.773 45.492 4.706 1.00 7.83 ATOM 322 O ILE 41 -2.486 46.481 4.569 1.00 7.83 ATOM 323 N GLY 42 -0.542 45.439 4.168 1.00 8.30 ATOM 324 CA GLY 42 -0.013 46.549 3.428 1.00 8.30 ATOM 325 C GLY 42 0.839 47.380 4.341 1.00 8.30 ATOM 326 O GLY 42 1.218 48.499 3.997 1.00 8.30 ATOM 327 N ARG 43 1.164 46.851 5.539 1.00 8.32 ATOM 328 CA ARG 43 1.993 47.573 6.464 1.00 8.32 ATOM 329 CB ARG 43 1.874 47.094 7.920 1.00 8.32 ATOM 330 CG ARG 43 0.512 47.431 8.532 1.00 8.32 ATOM 331 CD ARG 43 0.357 46.987 9.988 1.00 8.32 ATOM 332 NE ARG 43 0.555 45.511 10.022 1.00 8.32 ATOM 333 CZ ARG 43 1.812 44.995 10.154 1.00 8.32 ATOM 334 NH1 ARG 43 2.886 45.821 10.331 1.00 8.32 ATOM 335 NH2 ARG 43 1.997 43.644 10.103 1.00 8.32 ATOM 336 C ARG 43 3.424 47.469 6.033 1.00 8.32 ATOM 337 O ARG 43 3.795 46.591 5.255 1.00 8.32 ATOM 338 N SER 44 4.274 48.395 6.520 1.00 7.28 ATOM 339 CA SER 44 5.648 48.410 6.107 1.00 7.28 ATOM 340 CB SER 44 6.409 49.666 6.569 1.00 7.28 ATOM 341 OG SER 44 7.758 49.609 6.125 1.00 7.28 ATOM 342 C SER 44 6.357 47.206 6.641 1.00 7.28 ATOM 343 O SER 44 5.989 46.643 7.671 1.00 7.28 ATOM 344 N LYS 45 7.401 46.761 5.915 1.00 8.06 ATOM 345 CA LYS 45 8.188 45.643 6.349 1.00 8.06 ATOM 346 CB LYS 45 8.538 44.654 5.226 1.00 8.06 ATOM 347 CG LYS 45 9.103 45.311 3.964 1.00 8.06 ATOM 348 CD LYS 45 8.078 46.175 3.225 1.00 8.06 ATOM 349 CE LYS 45 8.579 46.732 1.891 1.00 8.06 ATOM 350 NZ LYS 45 7.448 47.272 1.103 1.00 8.06 ATOM 351 C LYS 45 9.477 46.183 6.888 1.00 8.06 ATOM 352 O LYS 45 9.959 47.219 6.434 1.00 8.06 TER END