####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS004_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS004_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 23 - 45 4.83 12.15 LCS_AVERAGE: 42.15 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.93 17.64 LCS_AVERAGE: 14.51 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.56 17.97 LCS_AVERAGE: 11.31 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 8 3 3 3 3 3 5 6 6 6 6 8 9 9 10 11 12 12 14 14 15 LCS_GDT V 3 V 3 4 5 8 3 3 4 4 4 5 6 6 6 6 6 8 8 8 8 9 12 14 14 15 LCS_GDT Q 4 Q 4 4 5 9 3 3 4 4 4 5 6 6 6 6 7 9 9 10 11 17 19 22 22 22 LCS_GDT G 5 G 5 4 5 10 3 3 4 4 4 5 6 6 6 9 11 12 15 17 20 22 25 31 33 37 LCS_GDT P 6 P 6 4 5 10 1 3 4 4 5 5 6 7 9 11 14 16 18 22 25 28 32 34 37 38 LCS_GDT W 7 W 7 3 5 10 3 3 4 4 5 5 6 6 8 12 14 19 20 22 25 28 32 34 37 38 LCS_GDT V 8 V 8 3 5 10 3 3 4 4 5 6 9 13 14 15 19 21 24 26 28 31 32 34 37 38 LCS_GDT G 9 G 9 3 5 14 3 3 4 4 8 11 11 14 16 17 20 23 25 28 28 31 32 34 37 38 LCS_GDT S 10 S 10 3 5 14 0 3 3 4 5 6 6 14 16 17 20 23 25 28 28 31 32 34 37 38 LCS_GDT S 11 S 11 3 4 15 3 5 6 7 8 11 11 14 16 17 20 23 25 28 28 31 32 34 37 38 LCS_GDT Y 12 Y 12 3 3 15 1 4 5 6 8 10 11 14 16 17 20 23 25 28 28 31 32 34 37 38 LCS_GDT V 13 V 13 3 4 15 0 3 3 6 8 10 11 13 16 17 20 23 25 28 28 31 32 34 37 38 LCS_GDT A 14 A 14 3 4 15 3 3 3 6 8 10 11 13 16 17 20 23 25 28 28 31 32 34 37 38 LCS_GDT E 15 E 15 3 4 15 3 3 3 4 5 6 7 8 11 13 17 18 20 23 28 28 32 34 37 38 LCS_GDT T 16 T 16 3 4 17 3 3 3 5 5 5 7 8 9 11 12 14 19 20 24 26 29 32 35 38 LCS_GDT G 17 G 17 3 5 17 3 3 3 5 5 6 7 9 11 14 17 18 21 24 28 31 32 34 37 38 LCS_GDT Q 18 Q 18 4 5 17 3 3 4 5 5 9 10 13 13 15 17 20 21 24 28 31 32 34 37 38 LCS_GDT N 19 N 19 4 11 17 3 3 4 6 6 9 10 13 14 15 17 20 21 24 28 31 32 34 37 38 LCS_GDT W 20 W 20 10 11 17 7 10 10 10 10 10 10 13 13 15 17 20 21 24 28 28 32 34 37 38 LCS_GDT A 21 A 21 10 11 17 4 10 10 10 10 10 10 11 12 12 14 17 20 22 24 26 28 30 33 38 LCS_GDT S 22 S 22 10 11 17 7 10 10 10 10 10 10 11 12 12 14 15 19 22 24 26 29 33 37 38 LCS_GDT L 23 L 23 10 11 23 7 10 10 10 10 10 11 13 15 17 20 22 25 28 28 31 32 34 37 38 LCS_GDT A 24 A 24 10 11 23 7 10 10 10 10 10 11 14 16 17 20 23 25 28 28 31 32 34 37 38 LCS_GDT A 25 A 25 10 11 23 7 10 10 10 10 10 11 14 16 17 20 23 25 28 28 31 32 34 37 38 LCS_GDT N 26 N 26 10 11 23 7 10 10 10 10 10 10 12 16 18 20 23 25 28 28 31 32 34 37 38 LCS_GDT E 27 E 27 10 11 23 7 10 10 10 10 10 10 13 16 18 19 23 25 28 28 31 32 34 37 38 LCS_GDT L 28 L 28 10 11 23 7 10 10 10 10 10 10 13 16 18 20 23 25 28 28 31 32 34 37 38 LCS_GDT R 29 R 29 10 11 23 7 10 10 10 10 10 11 12 16 18 19 21 22 28 28 31 32 34 37 38 LCS_GDT V 30 V 30 3 4 23 3 3 4 6 7 9 11 12 16 18 19 21 22 28 28 31 32 34 37 38 LCS_GDT T 31 T 31 3 4 23 3 3 3 4 7 9 11 13 16 18 20 23 25 28 28 31 32 34 37 38 LCS_GDT E 32 E 32 4 5 23 3 4 4 4 8 9 11 13 16 18 20 23 25 28 28 31 32 34 37 38 LCS_GDT R 33 R 33 4 5 23 0 4 4 4 5 6 7 10 14 17 17 20 21 28 28 30 32 34 37 38 LCS_GDT P 34 P 34 4 5 23 3 4 4 4 8 9 11 13 16 18 20 23 25 28 28 31 32 34 37 38 LCS_GDT F 35 F 35 4 6 23 3 4 4 6 8 11 11 14 16 18 20 23 25 28 28 31 32 34 37 38 LCS_GDT W 36 W 36 4 6 23 3 4 4 6 8 11 11 14 16 18 20 23 25 28 28 31 32 34 37 38 LCS_GDT I 37 I 37 4 6 23 3 4 4 6 7 8 11 11 14 16 19 20 22 23 26 29 30 30 34 35 LCS_GDT S 38 S 38 4 6 23 3 4 4 6 7 9 11 14 16 18 20 23 25 28 28 31 32 34 37 38 LCS_GDT S 39 S 39 3 6 23 3 3 4 6 7 11 11 14 16 18 20 23 25 28 28 31 32 34 37 38 LCS_GDT F 40 F 40 3 6 23 3 3 4 6 7 11 11 14 16 18 20 23 25 28 28 31 32 34 37 38 LCS_GDT I 41 I 41 3 5 23 3 3 6 7 8 11 11 14 16 18 20 23 25 28 28 31 32 34 37 38 LCS_GDT G 42 G 42 4 5 23 3 5 5 7 8 11 11 14 16 18 20 23 25 28 28 31 32 34 37 38 LCS_GDT R 43 R 43 4 5 23 3 5 6 7 8 11 11 14 16 18 20 23 25 28 28 31 32 34 37 38 LCS_GDT S 44 S 44 4 5 23 3 4 6 7 8 11 11 14 16 18 20 23 25 28 28 31 32 34 37 38 LCS_GDT K 45 K 45 4 5 23 3 5 6 7 8 11 11 14 16 18 20 23 25 28 28 31 32 34 37 38 LCS_AVERAGE LCS_A: 22.66 ( 11.31 14.51 42.15 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 10 10 10 11 11 14 16 18 20 23 25 28 28 31 32 34 37 38 GDT PERCENT_AT 15.91 22.73 22.73 22.73 22.73 25.00 25.00 31.82 36.36 40.91 45.45 52.27 56.82 63.64 63.64 70.45 72.73 77.27 84.09 86.36 GDT RMS_LOCAL 0.28 0.56 0.56 0.56 0.56 2.31 2.28 2.78 3.14 3.67 3.88 4.29 4.48 4.85 4.85 5.60 5.66 6.00 6.74 6.88 GDT RMS_ALL_AT 17.89 17.97 17.97 17.97 17.97 10.97 10.96 10.98 10.83 12.96 10.94 11.25 11.15 11.35 11.35 10.74 11.14 10.76 10.01 9.95 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 28.868 0 0.079 0.102 30.095 0.000 0.000 - LGA V 3 V 3 27.084 0 0.641 0.993 28.090 0.000 0.000 27.106 LGA Q 4 Q 4 24.346 0 0.082 0.658 26.772 0.000 0.000 26.083 LGA G 5 G 5 19.524 0 0.524 0.524 21.411 0.000 0.000 - LGA P 6 P 6 15.282 0 0.622 0.535 18.073 0.000 0.000 15.938 LGA W 7 W 7 9.973 0 0.391 0.317 16.996 0.000 0.000 15.179 LGA V 8 V 8 5.928 0 0.618 0.626 9.047 1.364 0.779 7.036 LGA G 9 G 9 1.661 0 0.561 0.561 2.476 44.545 44.545 - LGA S 10 S 10 3.869 0 0.650 0.678 6.030 19.545 13.030 5.911 LGA S 11 S 11 2.098 0 0.603 0.586 6.362 52.273 35.152 6.362 LGA Y 12 Y 12 5.071 0 0.668 1.156 15.934 1.364 0.455 15.934 LGA V 13 V 13 7.975 0 0.556 1.394 12.139 0.000 0.000 8.924 LGA A 14 A 14 7.706 0 0.611 0.602 8.366 0.000 0.000 - LGA E 15 E 15 10.788 0 0.660 0.973 15.124 0.000 0.000 13.187 LGA T 16 T 16 12.219 0 0.120 1.101 16.229 0.000 0.000 15.547 LGA G 17 G 17 11.785 0 0.090 0.090 12.107 0.000 0.000 - LGA Q 18 Q 18 12.932 0 0.585 0.969 16.605 0.000 0.000 16.605 LGA N 19 N 19 12.817 0 0.038 1.156 13.040 0.000 0.000 10.676 LGA W 20 W 20 13.748 0 0.642 1.228 22.654 0.000 0.000 22.654 LGA A 21 A 21 14.720 0 0.023 0.028 17.431 0.000 0.000 - LGA S 22 S 22 13.788 0 0.089 0.113 16.111 0.000 0.000 16.111 LGA L 23 L 23 8.260 0 0.090 1.381 10.385 0.455 0.227 7.522 LGA A 24 A 24 4.152 0 0.055 0.065 6.405 13.636 10.909 - LGA A 25 A 25 5.874 0 0.023 0.022 8.714 0.000 0.000 - LGA N 26 N 26 8.345 0 0.046 0.472 13.480 0.000 0.000 13.342 LGA E 27 E 27 6.639 0 0.076 1.387 9.005 0.000 0.000 8.558 LGA L 28 L 28 5.368 0 0.197 0.268 7.614 0.000 1.591 5.734 LGA R 29 R 29 9.141 0 0.311 1.360 11.627 0.000 0.000 11.344 LGA V 30 V 30 10.409 0 0.629 0.551 11.403 0.000 0.000 11.403 LGA T 31 T 31 10.021 0 0.085 0.361 11.849 0.000 0.000 11.081 LGA E 32 E 32 7.684 0 0.592 1.381 9.327 0.000 0.000 9.327 LGA R 33 R 33 10.642 0 0.642 1.319 14.636 0.000 0.000 14.636 LGA P 34 P 34 7.213 0 0.642 0.606 10.384 0.000 0.000 9.199 LGA F 35 F 35 2.253 0 0.617 1.366 5.810 31.364 24.132 4.439 LGA W 36 W 36 2.032 0 0.059 0.811 12.135 43.636 15.584 12.135 LGA I 37 I 37 6.504 0 0.643 1.419 13.057 0.455 0.227 13.057 LGA S 38 S 38 3.689 0 0.316 0.608 4.470 11.364 11.515 4.470 LGA S 39 S 39 2.813 0 0.712 0.849 5.530 16.364 21.818 2.956 LGA F 40 F 40 3.404 0 0.342 1.132 11.976 25.455 9.752 11.976 LGA I 41 I 41 1.220 0 0.130 1.418 8.270 52.273 27.727 8.270 LGA G 42 G 42 2.968 0 0.597 0.597 2.968 45.455 45.455 - LGA R 43 R 43 2.259 0 0.023 1.014 7.365 38.636 17.025 6.039 LGA S 44 S 44 2.103 0 0.059 0.685 4.387 47.727 37.273 4.387 LGA K 45 K 45 2.601 0 0.625 1.241 8.100 30.000 16.768 8.100 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.303 9.106 9.983 10.816 7.590 1.247 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 14 2.78 36.932 30.074 0.486 LGA_LOCAL RMSD: 2.781 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.977 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.303 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.367285 * X + 0.211718 * Y + -0.905692 * Z + -1.472037 Y_new = -0.837494 * X + -0.498868 * Y + 0.223011 * Z + 28.230515 Z_new = -0.404605 * X + 0.840420 * Y + 0.360539 * Z + 15.705567 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.984089 0.416547 1.165544 [DEG: -113.6799 23.8664 66.7807 ] ZXZ: -1.812227 1.201951 -0.448683 [DEG: -103.8329 68.8667 -25.7076 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS004_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS004_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 14 2.78 30.074 9.30 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS004_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT 3dcl_E ATOM 9 N ALA 2 -13.524 29.616 -1.973 1.00 0.70 N ATOM 10 CA ALA 2 -12.340 29.185 -2.712 1.00 0.70 C ATOM 11 C ALA 2 -12.279 27.660 -2.866 1.00 0.70 C ATOM 12 O ALA 2 -12.571 26.923 -1.922 1.00 0.70 O ATOM 13 CB ALA 2 -11.083 29.716 -2.010 1.00 0.70 C ATOM 14 N VAL 3 -11.889 27.184 -4.041 1.00 1.46 N ATOM 15 CA VAL 3 -11.845 25.745 -4.330 1.00 1.46 C ATOM 16 C VAL 3 -10.446 25.173 -4.134 1.00 1.46 C ATOM 17 O VAL 3 -10.239 23.957 -4.089 1.00 1.46 O ATOM 18 CB VAL 3 -12.317 25.440 -5.774 1.00 1.46 C ATOM 19 CG1 VAL 3 -13.739 25.954 -5.992 1.00 1.46 C ATOM 20 CG2 VAL 3 -11.387 26.046 -6.841 1.00 1.46 C ATOM 21 N GLN 4 -9.494 26.084 -4.005 1.00 1.88 N ATOM 22 CA GLN 4 -8.097 25.796 -3.735 1.00 1.88 C ATOM 23 C GLN 4 -7.725 27.068 -2.985 1.00 1.88 C ATOM 24 O GLN 4 -8.138 28.146 -3.425 1.00 1.88 O ATOM 25 CB GLN 4 -7.317 25.686 -5.049 1.00 1.88 C ATOM 26 CG GLN 4 -5.846 25.348 -4.868 1.00 1.88 C ATOM 27 CD GLN 4 -5.020 25.511 -6.126 1.00 1.88 C ATOM 28 OE1 GLN 4 -5.443 26.119 -7.105 1.00 1.88 O ATOM 29 NE2 GLN 4 -3.820 25.009 -6.092 1.00 1.88 N ATOM 30 N GLY 5 -7.007 26.974 -1.874 1.00 2.58 N ATOM 31 CA GLY 5 -6.709 28.145 -1.061 1.00 2.58 C ATOM 32 C GLY 5 -5.364 28.242 -0.356 1.00 2.58 C ATOM 33 O GLY 5 -5.375 28.457 0.856 1.00 2.58 O ATOM 34 N PRO 6 -4.203 28.069 -1.012 1.00 2.67 N ATOM 35 CA PRO 6 -2.977 28.261 -0.223 1.00 2.67 C ATOM 36 C PRO 6 -2.650 29.728 0.091 1.00 2.67 C ATOM 37 O PRO 6 -2.527 30.570 -0.804 1.00 2.67 O ATOM 38 CB PRO 6 -1.906 27.640 -1.119 1.00 2.67 C ATOM 39 CG PRO 6 -2.402 27.896 -2.502 1.00 2.67 C ATOM 40 CD PRO 6 -3.888 27.721 -2.411 1.00 2.67 C ATOM 41 N TRP 7 -2.484 30.060 1.362 1.00 1.66 N ATOM 42 CA TRP 7 -2.060 31.406 1.736 1.00 1.66 C ATOM 43 C TRP 7 -0.560 31.580 1.538 1.00 1.66 C ATOM 44 O TRP 7 0.230 30.638 1.691 1.00 1.66 O ATOM 45 CB TRP 7 -2.416 31.702 3.193 1.00 1.66 C ATOM 46 CG TRP 7 -3.899 31.791 3.398 1.00 1.66 C ATOM 47 CD1 TRP 7 -4.732 30.842 3.907 1.00 1.66 C ATOM 48 CD2 TRP 7 -4.746 32.910 3.085 1.00 1.66 C ATOM 49 NE1 TRP 7 -6.025 31.283 3.959 1.00 1.66 N ATOM 50 CE2 TRP 7 -6.063 32.573 3.505 1.00 1.66 C ATOM 51 CE3 TRP 7 -4.525 34.168 2.486 1.00 1.66 C ATOM 52 CZ2 TRP 7 -7.133 33.483 3.414 1.00 1.66 C ATOM 53 CZ3 TRP 7 -5.592 35.099 2.423 1.00 1.66 C ATOM 54 CH2 TRP 7 -6.882 34.747 2.911 1.00 1.66 C ATOM 55 N VAL 8 -0.169 32.812 1.241 1.00 1.88 N ATOM 56 CA VAL 8 1.235 33.195 1.122 1.00 1.88 C ATOM 57 C VAL 8 1.540 34.145 2.275 1.00 1.88 C ATOM 58 O VAL 8 1.095 35.292 2.286 1.00 1.88 O ATOM 59 CB VAL 8 1.534 33.857 -0.255 1.00 1.88 C ATOM 60 CG1 VAL 8 3.011 34.249 -0.375 1.00 1.88 C ATOM 61 CG2 VAL 8 1.159 32.903 -1.405 1.00 1.88 C ATOM 62 N GLY 9 2.267 33.645 3.260 1.00 1.64 N ATOM 63 CA GLY 9 2.700 34.415 4.410 1.00 1.64 C ATOM 64 C GLY 9 3.949 33.678 4.843 1.00 1.64 C ATOM 65 O GLY 9 4.196 32.596 4.306 1.00 1.64 O ATOM 66 N SER 10 4.756 34.224 5.738 1.00 2.13 N ATOM 67 CA SER 10 5.997 33.559 6.132 1.00 2.13 C ATOM 68 C SER 10 5.789 32.534 7.241 1.00 2.13 C ATOM 69 O SER 10 4.959 32.743 8.127 1.00 2.13 O ATOM 70 CB SER 10 6.984 34.615 6.608 1.00 2.13 C ATOM 71 OG SER 10 7.070 35.644 5.640 1.00 2.13 O ATOM 72 N SER 11 6.555 31.451 7.209 1.00 2.14 N ATOM 73 CA SER 11 6.530 30.420 8.251 1.00 2.14 C ATOM 74 C SER 11 7.550 30.781 9.335 1.00 2.14 C ATOM 75 O SER 11 8.427 31.616 9.099 1.00 2.14 O ATOM 76 CB SER 11 6.871 29.054 7.653 1.00 2.14 C ATOM 77 OG SER 11 6.703 28.038 8.626 1.00 2.14 O ATOM 78 N TYR 12 7.460 30.161 10.503 1.00 2.23 N ATOM 79 CA TYR 12 8.312 30.452 11.661 1.00 2.23 C ATOM 80 C TYR 12 8.496 29.136 12.415 1.00 2.23 C ATOM 81 O TYR 12 7.693 28.216 12.225 1.00 2.23 O ATOM 82 CB TYR 12 7.622 31.516 12.521 1.00 2.23 C ATOM 83 CG TYR 12 8.403 32.052 13.699 1.00 2.23 C ATOM 84 CD1 TYR 12 9.783 32.348 13.607 1.00 2.23 C ATOM 85 CD2 TYR 12 7.742 32.318 14.914 1.00 2.23 C ATOM 86 CE1 TYR 12 10.490 32.871 14.723 1.00 2.23 C ATOM 87 CE2 TYR 12 8.437 32.878 16.011 1.00 2.23 C ATOM 88 CZ TYR 12 9.811 33.129 15.916 1.00 2.23 C ATOM 89 OH TYR 12 10.502 33.639 16.989 1.00 2.23 O ATOM 90 N VAL 13 9.562 29.019 13.197 1.00 2.71 N ATOM 91 CA VAL 13 10.060 27.730 13.692 1.00 2.71 C ATOM 92 C VAL 13 10.171 27.674 15.216 1.00 2.71 C ATOM 93 O VAL 13 10.066 28.703 15.891 1.00 2.71 O ATOM 94 CB VAL 13 11.456 27.419 13.067 1.00 2.71 C ATOM 95 CG1 VAL 13 11.336 27.257 11.541 1.00 2.71 C ATOM 96 CG2 VAL 13 12.486 28.513 13.401 1.00 2.71 C ATOM 97 N ALA 14 10.366 26.473 15.749 1.00 2.37 N ATOM 98 CA ALA 14 10.508 26.236 17.183 1.00 2.37 C ATOM 99 C ALA 14 11.275 24.927 17.400 1.00 2.37 C ATOM 100 O ALA 14 11.339 24.096 16.502 1.00 2.37 O ATOM 101 CB ALA 14 9.123 26.109 17.816 1.00 2.37 C ATOM 102 N GLU 15 11.754 24.717 18.616 1.00 2.14 N ATOM 103 CA GLU 15 12.117 23.379 19.082 1.00 2.14 C ATOM 104 C GLU 15 10.784 22.620 19.218 1.00 2.14 C ATOM 105 O GLU 15 9.753 23.237 19.481 1.00 2.14 O ATOM 106 CB GLU 15 12.887 23.519 20.405 1.00 2.14 C ATOM 107 CG GLU 15 13.350 22.216 21.075 1.00 2.14 C ATOM 108 CD GLU 15 12.240 21.524 21.853 1.00 2.14 C ATOM 109 OE1 GLU 15 11.434 22.235 22.482 1.00 2.14 O ATOM 110 OE2 GLU 15 12.101 20.277 21.822 1.00 2.14 O ATOM 111 N THR 16 10.779 21.307 19.017 1.00 1.30 N ATOM 112 CA THR 16 9.542 20.512 18.965 1.00 1.30 C ATOM 113 C THR 16 8.618 20.661 20.184 1.00 1.30 C ATOM 114 O THR 16 7.392 20.721 20.045 1.00 1.30 O ATOM 115 CB THR 16 9.887 19.007 18.772 1.00 1.30 C ATOM 116 OG1 THR 16 10.753 18.851 17.641 1.00 1.30 O ATOM 117 CG2 THR 16 8.663 18.150 18.475 1.00 1.30 C ATOM 118 N GLY 17 9.173 20.791 21.381 1.00 0.77 N ATOM 119 CA GLY 17 8.374 20.968 22.586 1.00 0.77 C ATOM 120 C GLY 17 7.727 22.337 22.710 1.00 0.77 C ATOM 121 O GLY 17 6.843 22.567 23.535 1.00 0.77 O ATOM 122 N GLN 18 8.179 23.260 21.877 1.00 0.88 N ATOM 123 CA GLN 18 7.768 24.660 21.908 1.00 0.88 C ATOM 124 C GLN 18 6.970 24.989 20.648 1.00 0.88 C ATOM 125 O GLN 18 6.705 26.156 20.350 1.00 0.88 O ATOM 126 CB GLN 18 9.034 25.517 22.009 1.00 0.88 C ATOM 127 CG GLN 18 9.841 25.242 23.279 1.00 0.88 C ATOM 128 CD GLN 18 11.230 25.831 23.240 1.00 0.88 C ATOM 129 OE1 GLN 18 11.501 26.773 22.504 1.00 0.88 O ATOM 130 NE2 GLN 18 12.128 25.261 23.990 1.00 0.88 N ATOM 131 N ASN 19 6.573 23.957 19.909 1.00 1.72 N ATOM 132 CA ASN 19 5.833 24.127 18.654 1.00 1.72 C ATOM 133 C ASN 19 4.550 24.920 18.824 1.00 1.72 C ATOM 134 O ASN 19 4.206 25.746 17.990 1.00 1.72 O ATOM 135 CB ASN 19 5.436 22.766 18.073 1.00 1.72 C ATOM 136 CG ASN 19 6.304 22.348 16.926 1.00 1.72 C ATOM 137 OD1 ASN 19 6.646 23.148 16.064 1.00 1.72 O ATOM 138 ND2 ASN 19 6.641 21.094 16.878 1.00 1.72 N ATOM 139 N TRP 20 3.854 24.703 19.927 1.00 2.02 N ATOM 140 CA TRP 20 2.604 25.406 20.201 1.00 2.02 C ATOM 141 C TRP 20 2.789 26.925 20.264 1.00 2.02 C ATOM 142 O TRP 20 1.873 27.681 19.928 1.00 2.02 O ATOM 143 CB TRP 20 2.036 24.898 21.530 1.00 2.02 C ATOM 144 CG TRP 20 2.887 25.297 22.711 1.00 2.02 C ATOM 145 CD1 TRP 20 4.037 24.709 23.150 1.00 2.02 C ATOM 146 CD2 TRP 20 2.684 26.427 23.581 1.00 2.02 C ATOM 147 NE1 TRP 20 4.579 25.391 24.203 1.00 2.02 N ATOM 148 CE2 TRP 20 3.759 26.441 24.514 1.00 2.02 C ATOM 149 CE3 TRP 20 1.705 27.439 23.658 1.00 2.02 C ATOM 150 CZ2 TRP 20 3.842 27.394 25.548 1.00 2.02 C ATOM 151 CZ3 TRP 20 1.786 28.399 24.695 1.00 2.02 C ATOM 152 CH2 TRP 20 2.856 28.358 25.632 1.00 2.02 C ATOM 153 N ALA 21 3.973 27.367 20.670 1.00 1.71 N ATOM 154 CA ALA 21 4.252 28.781 20.857 1.00 1.71 C ATOM 155 C ALA 21 4.522 29.474 19.518 1.00 1.71 C ATOM 156 O ALA 21 4.114 30.618 19.313 1.00 1.71 O ATOM 157 CB ALA 21 5.421 28.951 21.836 1.00 1.71 C ATOM 158 N SER 22 5.173 28.791 18.584 1.00 1.54 N ATOM 159 CA SER 22 5.398 29.392 17.265 1.00 1.54 C ATOM 160 C SER 22 4.154 29.226 16.411 1.00 1.54 C ATOM 161 O SER 22 3.941 29.980 15.471 1.00 1.54 O ATOM 162 CB SER 22 6.577 28.743 16.543 1.00 1.54 C ATOM 163 OG SER 22 6.350 27.357 16.358 1.00 1.54 O ATOM 164 N LEU 23 3.322 28.247 16.730 1.00 1.61 N ATOM 165 CA LEU 23 2.141 27.947 15.929 1.00 1.61 C ATOM 166 C LEU 23 1.075 29.027 15.864 1.00 1.61 C ATOM 167 O LEU 23 0.667 29.424 14.774 1.00 1.61 O ATOM 168 CB LEU 23 1.500 26.672 16.467 1.00 1.61 C ATOM 169 CG LEU 23 0.171 26.210 15.868 1.00 1.61 C ATOM 170 CD1 LEU 23 0.220 26.061 14.369 1.00 1.61 C ATOM 171 CD2 LEU 23 -0.169 24.886 16.519 1.00 1.61 C ATOM 172 N ALA 24 0.585 29.521 16.990 1.00 1.63 N ATOM 173 CA ALA 24 -0.445 30.545 16.865 1.00 1.63 C ATOM 174 C ALA 24 0.244 31.858 16.507 1.00 1.63 C ATOM 175 O ALA 24 -0.348 32.695 15.852 1.00 1.63 O ATOM 176 CB ALA 24 -1.300 30.668 18.106 1.00 1.63 C ATOM 177 N ALA 25 1.518 32.003 16.854 1.00 0.87 N ATOM 178 CA ALA 25 2.277 33.170 16.414 1.00 0.87 C ATOM 179 C ALA 25 2.313 33.204 14.879 1.00 0.87 C ATOM 180 O ALA 25 2.151 34.261 14.292 1.00 0.87 O ATOM 181 CB ALA 25 3.697 33.148 17.006 1.00 0.87 C ATOM 182 N ASN 26 2.477 32.051 14.242 1.00 0.87 N ATOM 183 CA ASN 26 2.417 31.944 12.786 1.00 0.87 C ATOM 184 C ASN 26 1.054 32.337 12.243 1.00 0.87 C ATOM 185 O ASN 26 0.965 33.121 11.310 1.00 0.87 O ATOM 186 CB ASN 26 2.675 30.500 12.338 1.00 0.87 C ATOM 187 CG ASN 26 4.092 30.256 11.945 1.00 0.87 C ATOM 188 OD1 ASN 26 4.640 30.974 11.123 1.00 0.87 O ATOM 189 ND2 ASN 26 4.688 29.234 12.492 1.00 0.87 N ATOM 190 N GLU 27 -0.012 31.790 12.808 1.00 0.83 N ATOM 191 CA GLU 27 -1.353 32.068 12.291 1.00 0.83 C ATOM 192 C GLU 27 -1.716 33.540 12.434 1.00 0.83 C ATOM 193 O GLU 27 -2.307 34.122 11.531 1.00 0.83 O ATOM 194 CB GLU 27 -2.384 31.190 12.996 1.00 0.83 C ATOM 195 CG GLU 27 -3.797 31.304 12.422 1.00 0.83 C ATOM 196 CD GLU 27 -4.652 32.364 13.110 1.00 0.83 C ATOM 197 OE1 GLU 27 -4.770 32.316 14.355 1.00 0.83 O ATOM 198 OE2 GLU 27 -5.274 33.202 12.424 1.00 0.83 O ATOM 199 N LEU 28 -1.279 34.165 13.518 1.00 1.48 N ATOM 200 CA LEU 28 -1.512 35.591 13.721 1.00 1.48 C ATOM 201 C LEU 28 -0.840 36.436 12.641 1.00 1.48 C ATOM 202 O LEU 28 -1.357 37.478 12.278 1.00 1.48 O ATOM 203 CB LEU 28 -1.025 36.016 15.109 1.00 1.48 C ATOM 204 CG LEU 28 -1.861 35.538 16.310 1.00 1.48 C ATOM 205 CD1 LEU 28 -1.038 35.699 17.587 1.00 1.48 C ATOM 206 CD2 LEU 28 -3.182 36.289 16.443 1.00 1.48 C ATOM 207 N ARG 29 0.267 35.978 12.068 1.00 1.65 N ATOM 208 CA ARG 29 0.907 36.702 10.955 1.00 1.65 C ATOM 209 C ARG 29 0.115 36.509 9.668 1.00 1.65 C ATOM 210 O ARG 29 0.071 37.372 8.791 1.00 1.65 O ATOM 211 CB ARG 29 2.329 36.190 10.716 1.00 1.65 C ATOM 212 CG ARG 29 3.259 36.326 11.910 1.00 1.65 C ATOM 213 CD ARG 29 4.493 35.464 11.700 1.00 1.65 C ATOM 214 NE ARG 29 5.411 36.158 10.795 1.00 1.65 N ATOM 215 CZ ARG 29 6.506 35.681 10.227 1.00 1.65 C ATOM 216 NH1 ARG 29 7.266 36.523 9.592 1.00 1.65 N ATOM 217 NH2 ARG 29 6.878 34.432 10.301 1.00 1.65 N ATOM 218 N VAL 30 -0.516 35.352 9.538 1.00 2.21 N ATOM 219 CA VAL 30 -1.324 35.061 8.356 1.00 2.21 C ATOM 220 C VAL 30 -2.578 35.929 8.396 1.00 2.21 C ATOM 221 O VAL 30 -3.005 36.373 7.336 1.00 2.21 O ATOM 222 CB VAL 30 -1.662 33.541 8.211 1.00 2.21 C ATOM 223 CG1 VAL 30 -2.508 33.254 6.951 1.00 2.21 C ATOM 224 CG2 VAL 30 -0.372 32.718 8.098 1.00 2.21 C ATOM 225 N THR 31 -3.132 36.228 9.567 1.00 2.23 N ATOM 226 CA THR 31 -4.254 37.169 9.680 1.00 2.23 C ATOM 227 C THR 31 -3.878 38.647 9.732 1.00 2.23 C ATOM 228 O THR 31 -4.632 39.494 9.268 1.00 2.23 O ATOM 229 CB THR 31 -5.053 36.921 10.965 1.00 2.23 C ATOM 230 OG1 THR 31 -4.217 36.284 11.932 1.00 2.23 O ATOM 231 CG2 THR 31 -6.194 36.000 10.722 1.00 2.23 C ATOM 232 N GLU 32 -2.704 38.962 10.254 1.00 2.58 N ATOM 233 CA GLU 32 -2.195 40.334 10.299 1.00 2.58 C ATOM 234 C GLU 32 -2.197 40.932 8.906 1.00 2.58 C ATOM 235 O GLU 32 -2.641 42.047 8.672 1.00 2.58 O ATOM 236 CB GLU 32 -0.747 40.267 10.795 1.00 2.58 C ATOM 237 CG GLU 32 0.123 41.488 10.558 1.00 2.58 C ATOM 238 CD GLU 32 1.592 41.212 10.844 1.00 2.58 C ATOM 239 OE1 GLU 32 1.955 40.129 11.345 1.00 2.58 O ATOM 240 OE2 GLU 32 2.417 42.090 10.509 1.00 2.58 O ATOM 241 N ARG 33 -1.688 40.146 7.978 1.00 2.57 N ATOM 242 CA ARG 33 -1.457 40.572 6.606 1.00 2.57 C ATOM 243 C ARG 33 -2.682 41.018 5.789 1.00 2.57 C ATOM 244 O ARG 33 -2.600 42.046 5.115 1.00 2.57 O ATOM 245 CB ARG 33 -0.688 39.396 6.018 1.00 2.57 C ATOM 246 CG ARG 33 -0.371 39.374 4.534 1.00 2.57 C ATOM 247 CD ARG 33 0.256 38.014 4.212 1.00 2.57 C ATOM 248 NE ARG 33 -0.684 36.940 4.584 1.00 2.57 N ATOM 249 CZ ARG 33 -1.664 36.459 3.833 1.00 2.57 C ATOM 250 NH1 ARG 33 -2.680 35.902 4.428 1.00 2.57 N ATOM 251 NH2 ARG 33 -1.687 36.583 2.534 1.00 2.57 N ATOM 252 N PRO 34 -3.817 40.286 5.775 1.00 2.37 N ATOM 253 CA PRO 34 -5.001 40.981 5.253 1.00 2.37 C ATOM 254 C PRO 34 -5.542 42.166 6.047 1.00 2.37 C ATOM 255 O PRO 34 -6.118 43.070 5.442 1.00 2.37 O ATOM 256 CB PRO 34 -6.070 39.882 5.244 1.00 2.37 C ATOM 257 CG PRO 34 -5.319 38.634 5.153 1.00 2.37 C ATOM 258 CD PRO 34 -4.151 38.877 6.044 1.00 2.37 C ATOM 259 N PHE 35 -5.468 42.161 7.372 1.00 2.01 N ATOM 260 CA PHE 35 -6.152 43.207 8.136 1.00 2.01 C ATOM 261 C PHE 35 -5.365 44.512 8.187 1.00 2.01 C ATOM 262 O PHE 35 -5.951 45.590 8.090 1.00 2.01 O ATOM 263 CB PHE 35 -6.515 42.709 9.539 1.00 2.01 C ATOM 264 CG PHE 35 -7.414 41.491 9.531 1.00 2.01 C ATOM 265 CD1 PHE 35 -7.180 40.433 10.425 1.00 2.01 C ATOM 266 CD2 PHE 35 -8.484 41.378 8.617 1.00 2.01 C ATOM 267 CE1 PHE 35 -7.945 39.244 10.363 1.00 2.01 C ATOM 268 CE2 PHE 35 -9.254 40.193 8.538 1.00 2.01 C ATOM 269 CZ PHE 35 -8.968 39.115 9.398 1.00 2.01 C ATOM 270 N TRP 36 -4.046 44.428 8.268 1.00 1.21 N ATOM 271 CA TRP 36 -3.176 45.597 8.196 1.00 1.21 C ATOM 272 C TRP 36 -2.394 45.518 6.893 1.00 1.21 C ATOM 273 O TRP 36 -1.621 44.591 6.651 1.00 1.21 O ATOM 274 CB TRP 36 -2.249 45.689 9.410 1.00 1.21 C ATOM 275 CG TRP 36 -2.931 46.260 10.636 1.00 1.21 C ATOM 276 CD1 TRP 36 -4.270 46.440 10.839 1.00 1.21 C ATOM 277 CD2 TRP 36 -2.301 46.800 11.814 1.00 1.21 C ATOM 278 NE1 TRP 36 -4.522 47.055 12.030 1.00 1.21 N ATOM 279 CE2 TRP 36 -3.335 47.309 12.653 1.00 1.21 C ATOM 280 CE3 TRP 36 -0.963 46.919 12.244 1.00 1.21 C ATOM 281 CZ2 TRP 36 -3.068 47.930 13.890 1.00 1.21 C ATOM 282 CZ3 TRP 36 -0.692 47.547 13.491 1.00 1.21 C ATOM 283 CH2 TRP 36 -1.752 48.049 14.295 1.00 1.21 C ATOM 284 N ILE 37 -2.633 46.509 6.045 1.00 1.25 N ATOM 285 CA ILE 37 -2.076 46.551 4.696 1.00 1.25 C ATOM 286 C ILE 37 -0.553 46.515 4.787 1.00 1.25 C ATOM 287 O ILE 37 0.053 47.301 5.527 1.00 1.25 O ATOM 288 CB ILE 37 -2.531 47.839 3.932 1.00 1.25 C ATOM 289 CG1 ILE 37 -4.071 47.909 3.847 1.00 1.25 C ATOM 290 CG2 ILE 37 -1.919 47.895 2.506 1.00 1.25 C ATOM 291 CD1 ILE 37 -4.635 49.270 3.420 1.00 1.25 C ATOM 292 N SER 38 0.034 45.582 4.045 1.00 1.41 N ATOM 293 CA SER 38 1.484 45.400 3.930 1.00 1.41 C ATOM 294 C SER 38 2.213 45.271 5.263 1.00 1.41 C ATOM 295 O SER 38 3.286 45.853 5.463 1.00 1.41 O ATOM 296 CB SER 38 2.089 46.523 3.083 1.00 1.41 C ATOM 297 OG SER 38 1.469 46.532 1.806 1.00 1.41 O ATOM 298 N SER 39 1.641 44.498 6.172 1.00 2.39 N ATOM 299 CA SER 39 2.304 44.144 7.422 1.00 2.39 C ATOM 300 C SER 39 2.443 42.624 7.373 1.00 2.39 C ATOM 301 O SER 39 1.553 41.955 6.855 1.00 2.39 O ATOM 302 CB SER 39 1.474 44.640 8.605 1.00 2.39 C ATOM 303 OG SER 39 2.234 44.605 9.797 1.00 2.39 O ATOM 304 N PHE 40 3.591 42.097 7.776 1.00 2.48 N ATOM 305 CA PHE 40 3.919 40.674 7.624 1.00 2.48 C ATOM 306 C PHE 40 5.058 40.343 8.597 1.00 2.48 C ATOM 307 O PHE 40 5.984 39.584 8.286 1.00 2.48 O ATOM 308 CB PHE 40 4.315 40.381 6.161 1.00 2.48 C ATOM 309 CG PHE 40 5.315 41.364 5.583 1.00 2.48 C ATOM 310 CD1 PHE 40 6.697 41.101 5.632 1.00 2.48 C ATOM 311 CD2 PHE 40 4.875 42.561 4.982 1.00 2.48 C ATOM 312 CE1 PHE 40 7.638 42.052 5.160 1.00 2.48 C ATOM 313 CE2 PHE 40 5.801 43.525 4.516 1.00 2.48 C ATOM 314 CZ PHE 40 7.188 43.274 4.612 1.00 2.48 C ATOM 315 N ILE 41 5.040 41.000 9.749 1.00 2.13 N ATOM 316 CA ILE 41 6.222 41.124 10.612 1.00 2.13 C ATOM 317 C ILE 41 6.689 39.801 11.208 1.00 2.13 C ATOM 318 O ILE 41 5.945 38.825 11.250 1.00 2.13 O ATOM 319 CB ILE 41 5.973 42.171 11.742 1.00 2.13 C ATOM 320 CG1 ILE 41 4.878 41.751 12.743 1.00 2.13 C ATOM 321 CG2 ILE 41 5.554 43.521 11.106 1.00 2.13 C ATOM 322 CD1 ILE 41 5.248 40.814 13.885 1.00 2.13 C ATOM 323 N GLY 42 7.924 39.749 11.686 1.00 2.14 N ATOM 324 CA GLY 42 8.412 38.555 12.359 1.00 2.14 C ATOM 325 C GLY 42 8.037 38.626 13.823 1.00 2.14 C ATOM 326 O GLY 42 8.500 39.525 14.507 1.00 2.14 O ATOM 327 N ARG 43 7.197 37.737 14.330 1.00 1.99 N ATOM 328 CA ARG 43 6.846 37.762 15.758 1.00 1.99 C ATOM 329 C ARG 43 7.924 37.068 16.575 1.00 1.99 C ATOM 330 O ARG 43 8.615 36.194 16.069 1.00 1.99 O ATOM 331 CB ARG 43 5.523 37.035 16.019 1.00 1.99 C ATOM 332 CG ARG 43 4.333 37.966 16.216 1.00 1.99 C ATOM 333 CD ARG 43 3.363 37.386 17.239 1.00 1.99 C ATOM 334 NE ARG 43 3.909 37.448 18.609 1.00 1.99 N ATOM 335 CZ ARG 43 3.438 36.818 19.676 1.00 1.99 C ATOM 336 NH1 ARG 43 4.011 36.999 20.830 1.00 1.99 N ATOM 337 NH2 ARG 43 2.400 36.020 19.635 1.00 1.99 N ATOM 338 N SER 44 8.024 37.395 17.853 1.00 1.95 N ATOM 339 CA SER 44 8.786 36.563 18.779 1.00 1.95 C ATOM 340 C SER 44 7.981 35.333 19.201 1.00 1.95 C ATOM 341 O SER 44 6.790 35.443 19.502 1.00 1.95 O ATOM 342 CB SER 44 9.093 37.357 20.043 1.00 1.95 C ATOM 343 OG SER 44 9.798 36.547 20.967 1.00 1.95 O ATOM 344 N LYS 45 8.627 34.173 19.269 1.00 1.49 N ATOM 345 CA LYS 45 8.057 32.994 19.936 1.00 1.49 C ATOM 346 C LYS 45 8.316 33.090 21.431 1.00 1.49 C ATOM 347 O LYS 45 7.494 32.689 22.249 1.00 1.49 O ATOM 348 CB LYS 45 8.744 31.716 19.434 1.00 1.49 C ATOM 349 CG LYS 45 8.257 30.423 20.100 1.00 1.49 C ATOM 350 CD LYS 45 9.103 29.200 19.769 1.00 1.49 C ATOM 351 CE LYS 45 10.502 29.266 20.374 1.00 1.49 C ATOM 352 NZ LYS 45 10.566 29.326 21.869 1.00 1.49 N TER 1817 LEU A 249 END