####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 101 ( 404), selected 97 , name T1021s3TS116_5-D2 # Molecule2: number of CA atoms 97 ( 736), selected 97 , name T1021s3-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1021s3TS116_5-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 201 - 249 4.99 13.98 LONGEST_CONTINUOUS_SEGMENT: 45 202 - 250 4.95 13.99 LONGEST_CONTINUOUS_SEGMENT: 45 203 - 251 4.95 13.98 LONGEST_CONTINUOUS_SEGMENT: 45 227 - 271 4.97 14.25 LCS_AVERAGE: 41.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 195 - 212 1.76 15.83 LCS_AVERAGE: 11.20 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 196 - 212 0.75 15.78 LCS_AVERAGE: 8.00 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 97 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT L 195 L 195 3 18 25 0 3 3 5 11 13 16 20 23 31 34 39 51 57 61 66 70 72 73 75 LCS_GDT S 196 S 196 17 18 25 10 16 17 17 17 17 17 20 20 24 26 31 38 44 46 52 54 60 66 72 LCS_GDT P 197 P 197 17 18 25 10 16 17 17 17 17 17 20 21 24 25 27 30 35 41 48 55 61 70 72 LCS_GDT L 198 L 198 17 18 33 10 16 17 17 17 17 17 20 21 24 26 27 35 44 49 52 61 66 70 74 LCS_GDT V 199 V 199 17 18 33 10 16 17 17 17 17 17 20 22 26 31 38 43 57 59 64 67 72 73 75 LCS_GDT I 200 I 200 17 18 35 10 16 17 17 17 17 17 20 22 24 33 38 48 57 60 66 70 72 73 75 LCS_GDT T 201 T 201 17 18 45 10 16 17 17 17 17 17 20 22 25 33 42 51 57 61 66 70 72 73 75 LCS_GDT D 202 D 202 17 18 45 10 16 17 17 17 17 17 21 24 31 41 47 54 57 62 66 70 72 73 75 LCS_GDT A 203 A 203 17 18 45 10 16 17 17 17 17 17 24 30 40 45 51 56 60 64 66 70 72 73 75 LCS_GDT L 204 L 204 17 18 45 10 16 17 17 17 17 21 29 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT R 205 R 205 17 18 45 10 16 17 17 17 17 19 28 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT E 206 E 206 17 18 45 8 16 17 17 17 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT Q 207 Q 207 17 18 45 8 16 17 17 17 18 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT L 208 L 208 17 18 45 8 16 17 17 17 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT R 209 R 209 17 18 45 8 16 17 17 17 17 17 21 31 39 47 53 57 60 64 66 70 72 73 75 LCS_GDT V 210 V 210 17 18 45 8 16 17 17 17 17 20 28 31 39 46 53 57 60 64 66 70 72 73 75 LCS_GDT A 211 A 211 17 18 45 3 14 17 17 17 17 20 25 30 37 44 53 57 60 64 66 70 72 73 75 LCS_GDT L 212 L 212 17 18 45 3 16 17 17 17 17 17 18 21 27 31 36 42 50 55 62 65 70 72 74 LCS_GDT D 217 D 217 3 4 45 1 3 5 9 11 15 21 28 35 40 47 53 57 60 64 66 70 72 73 75 LCS_GDT A 218 A 218 3 4 45 2 3 6 9 11 15 21 28 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT C 219 C 219 3 4 45 3 3 6 9 12 15 20 28 31 38 47 53 57 60 64 66 70 72 73 75 LCS_GDT L 220 L 220 3 3 45 3 3 5 7 9 13 16 25 31 34 40 50 57 60 64 66 70 72 73 75 LCS_GDT A 221 A 221 3 10 45 3 3 6 11 13 16 20 24 29 39 47 53 57 60 64 66 70 72 73 75 LCS_GDT M 222 M 222 4 10 45 3 3 4 7 12 16 20 24 29 36 44 53 57 60 64 66 70 72 73 75 LCS_GDT T 223 T 223 4 10 45 3 3 4 6 9 15 20 22 27 37 44 49 57 60 64 66 70 72 73 75 LCS_GDT H 224 H 224 7 11 45 3 7 8 11 13 16 20 24 29 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT V 225 V 225 7 11 45 3 7 8 11 13 16 20 24 29 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT N 226 N 226 7 11 45 3 7 8 11 13 16 20 24 31 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT L 227 L 227 7 11 45 3 7 8 10 13 16 20 24 28 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT D 228 D 228 7 11 45 3 7 8 11 13 16 20 25 34 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT S 229 S 229 7 11 45 3 7 7 10 13 16 20 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT S 230 S 230 7 11 45 3 7 8 11 13 16 22 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT P 231 P 231 5 11 45 3 6 8 11 13 16 24 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT V 232 V 232 5 11 45 3 6 8 11 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT A 233 A 233 3 11 45 3 6 8 11 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT N 234 N 234 3 11 45 3 5 8 11 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT S 235 S 235 4 6 45 3 3 6 6 7 8 8 11 18 29 39 46 57 60 64 66 70 72 73 75 LCS_GDT D 236 D 236 4 6 45 3 3 4 5 6 8 8 9 17 20 23 33 42 48 55 65 67 69 72 75 LCS_GDT G 237 G 237 4 6 45 3 3 4 6 12 16 20 25 34 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT S 238 S 238 4 6 45 3 3 4 6 10 15 20 24 29 34 43 50 55 60 64 66 70 72 73 75 LCS_GDT A 239 A 239 5 6 45 3 6 8 8 8 8 11 16 22 24 28 36 43 46 50 54 64 69 73 75 LCS_GDT A 240 A 240 5 9 45 3 6 8 8 9 13 20 24 29 34 37 45 50 59 64 66 70 72 73 75 LCS_GDT E 241 E 241 5 11 45 3 5 8 8 9 13 20 24 29 35 45 53 57 60 64 66 70 72 73 75 LCS_GDT I 242 I 242 5 11 45 3 6 8 9 11 18 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT R 243 R 243 5 11 45 3 6 8 8 11 15 22 30 34 40 47 53 57 60 64 66 70 72 73 75 LCS_GDT V 244 V 244 5 11 45 3 6 7 8 13 16 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT S 245 S 245 5 11 45 3 6 7 9 12 15 22 28 34 40 46 53 57 60 64 66 70 72 73 75 LCS_GDT L 246 L 246 5 11 45 3 6 7 9 12 15 22 28 34 40 46 53 57 60 64 66 70 72 73 75 LCS_GDT R 247 R 247 5 11 45 3 5 7 9 12 15 22 28 34 40 47 53 57 60 64 66 70 72 73 75 LCS_GDT V 248 V 248 5 11 45 3 5 6 7 10 14 16 24 30 40 46 53 57 60 64 66 70 72 73 75 LCS_GDT Y 249 Y 249 5 11 45 4 5 7 8 11 14 22 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT G 250 G 250 5 11 45 4 5 7 9 13 19 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT M 251 M 251 5 11 45 4 5 8 11 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT T 252 T 252 5 9 45 4 5 8 11 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT P 253 P 253 4 9 45 3 4 6 11 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT T 254 T 254 4 9 45 3 3 6 6 7 9 12 14 35 39 45 51 57 59 64 66 70 72 73 75 LCS_GDT E 255 E 255 4 9 45 4 5 8 11 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT Y 256 Y 256 4 5 45 4 4 6 6 6 15 18 23 26 33 42 48 51 60 64 66 70 72 73 75 LCS_GDT L 257 L 257 4 5 45 4 4 6 6 6 9 13 16 19 25 32 36 42 51 56 62 64 69 71 73 LCS_GDT A 258 A 258 4 14 45 4 4 7 11 15 20 27 30 35 40 45 53 57 59 64 66 70 72 73 75 LCS_GDT P 259 P 259 12 14 45 4 10 12 12 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT M 260 M 260 12 14 45 6 11 12 12 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT N 261 N 261 12 14 45 8 11 12 12 13 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT T 262 T 262 12 14 45 8 11 12 12 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT V 263 V 263 12 14 45 8 11 12 12 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT F 264 F 264 12 14 45 8 11 12 12 13 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT N 265 N 265 12 14 45 8 11 12 12 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT E 266 E 266 12 14 45 8 11 12 12 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT W 267 W 267 12 14 45 8 11 12 12 13 19 23 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT E 268 E 268 12 14 45 8 11 12 12 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT K 269 K 269 12 14 45 3 11 12 12 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT S 270 S 270 12 14 45 3 11 12 12 14 19 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT E 271 E 271 3 14 45 3 4 6 9 13 18 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT A 272 A 272 4 6 44 3 4 4 8 10 14 16 20 24 33 41 48 54 60 64 66 70 72 73 75 LCS_GDT A 273 A 273 4 6 37 3 4 5 8 12 14 17 22 29 35 44 50 56 60 64 66 70 72 73 75 LCS_GDT A 274 A 274 5 6 36 3 5 5 7 11 13 15 19 23 30 34 39 43 50 57 65 69 72 73 75 LCS_GDT V 275 V 275 5 6 36 4 5 5 8 9 11 14 17 22 23 29 35 39 44 50 54 57 63 69 74 LCS_GDT T 276 T 276 5 5 26 4 5 5 7 9 11 15 18 19 22 23 26 26 29 32 35 40 50 53 55 LCS_GDT P 277 P 277 5 5 26 4 5 5 5 7 8 12 16 19 22 23 26 26 28 29 30 33 35 37 40 LCS_GDT D 278 D 278 5 5 26 4 5 5 7 9 11 15 18 19 22 23 26 26 28 29 30 31 33 34 35 LCS_GDT G 279 G 279 4 8 26 3 4 6 7 9 11 15 18 19 22 23 26 26 28 29 30 31 33 34 35 LCS_GDT Y 280 Y 280 7 8 26 3 6 7 7 8 10 15 18 19 22 23 26 26 28 29 30 31 33 34 35 LCS_GDT R 281 R 281 7 8 26 3 6 7 7 8 11 15 16 19 22 23 26 26 28 29 30 31 33 34 36 LCS_GDT V 282 V 282 7 8 26 3 6 7 7 9 11 15 18 19 22 23 26 28 31 38 45 54 59 64 70 LCS_GDT Y 283 Y 283 7 8 26 3 6 7 7 9 10 14 16 23 26 32 36 41 48 64 65 67 70 73 75 LCS_GDT I 284 I 284 7 8 26 3 6 7 8 13 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT N 285 N 285 7 8 26 3 6 8 10 15 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 LCS_GDT A 286 A 286 7 8 26 3 6 7 7 9 12 16 22 28 31 39 45 56 58 62 65 70 72 72 75 LCS_GDT V 287 V 287 4 7 26 3 4 5 7 9 11 15 18 19 22 23 26 26 28 29 38 43 53 56 66 LCS_GDT D 288 D 288 4 7 26 1 4 5 7 9 11 15 18 19 22 23 26 26 28 29 30 31 33 34 36 LCS_GDT K 289 K 289 4 7 26 3 4 5 6 7 11 15 18 19 22 23 26 26 28 29 30 31 33 34 35 LCS_GDT T 290 T 290 3 7 26 3 3 5 7 9 11 15 18 19 22 23 26 26 28 29 30 31 33 34 35 LCS_GDT D 291 D 291 3 7 26 3 3 4 7 9 11 15 18 19 22 23 26 26 28 29 30 31 33 34 35 LCS_GDT L 292 L 292 3 7 26 3 3 4 4 7 7 10 13 15 17 22 26 26 28 29 30 31 33 34 35 LCS_GDT T 293 T 293 3 7 26 3 3 4 4 7 7 11 12 16 20 23 26 26 28 29 30 31 33 34 35 LCS_GDT G 294 G 294 3 7 23 3 3 4 4 7 7 9 12 15 16 17 19 23 24 29 30 31 33 34 35 LCS_GDT I 295 I 295 3 3 23 3 3 3 4 7 9 11 12 15 16 19 23 26 26 29 30 31 33 34 35 LCS_AVERAGE LCS_A: 20.07 ( 8.00 11.20 41.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 16 17 17 17 20 27 30 35 41 47 53 57 60 64 66 70 72 73 75 GDT PERCENT_AT 10.31 16.49 17.53 17.53 17.53 20.62 27.84 30.93 36.08 42.27 48.45 54.64 58.76 61.86 65.98 68.04 72.16 74.23 75.26 77.32 GDT RMS_LOCAL 0.27 0.70 0.75 0.75 0.75 2.19 2.62 2.76 3.12 3.69 4.00 4.28 4.48 4.76 4.98 5.16 5.52 5.71 5.86 5.97 GDT RMS_ALL_AT 15.21 15.66 15.78 15.78 15.78 14.17 14.27 14.30 14.08 13.88 13.85 13.95 13.94 13.83 13.86 13.82 13.70 13.67 13.72 13.70 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA L 195 L 195 14.361 4 0.599 0.599 15.963 0.000 0.000 - LGA S 196 S 196 19.434 2 0.589 0.589 19.434 0.000 0.000 - LGA P 197 P 197 16.749 3 0.060 0.060 18.001 0.000 0.000 - LGA L 198 L 198 16.107 4 0.052 0.052 16.814 0.000 0.000 - LGA V 199 V 199 14.554 3 0.096 0.096 15.393 0.000 0.000 - LGA I 200 I 200 12.125 4 0.032 0.032 13.362 0.000 0.000 - LGA T 201 T 201 10.308 3 0.051 0.051 11.224 0.000 0.000 - LGA D 202 D 202 9.818 4 0.211 0.211 10.481 0.000 0.000 - LGA A 203 A 203 7.836 1 0.091 0.091 8.658 0.000 0.000 - LGA L 204 L 204 5.006 4 0.178 0.178 6.339 8.182 4.091 - LGA R 205 R 205 5.062 7 0.028 0.028 5.062 4.091 1.488 - LGA E 206 E 206 3.159 5 0.282 0.282 4.110 20.000 8.889 - LGA Q 207 Q 207 3.074 5 0.056 0.056 4.712 19.091 8.485 - LGA L 208 L 208 3.595 4 0.052 0.052 6.227 12.727 6.364 - LGA R 209 R 209 6.195 7 0.077 0.077 8.179 0.455 0.165 - LGA V 210 V 210 6.887 3 0.157 0.157 9.963 0.000 0.000 - LGA A 211 A 211 8.245 1 0.142 0.142 11.052 0.000 0.000 - LGA L 212 L 212 11.283 4 0.539 0.539 14.341 0.000 0.000 - LGA D 217 D 217 5.394 4 0.209 0.209 5.437 0.000 0.000 - LGA A 218 A 218 5.715 1 0.647 0.647 5.715 4.545 3.636 - LGA C 219 C 219 6.510 2 0.643 0.643 6.932 0.000 0.000 - LGA L 220 L 220 8.020 4 0.061 0.061 8.020 0.000 0.000 - LGA A 221 A 221 8.158 1 0.448 0.448 8.616 0.000 0.000 - LGA M 222 M 222 9.049 4 0.580 0.580 9.049 0.000 0.000 - LGA T 223 T 223 9.139 3 0.028 0.028 9.451 0.000 0.000 - LGA H 224 H 224 8.277 6 0.653 0.653 8.421 0.000 0.000 - LGA V 225 V 225 7.916 3 0.029 0.029 8.552 0.000 0.000 - LGA N 226 N 226 6.899 4 0.610 0.610 7.120 1.364 0.682 - LGA L 227 L 227 7.053 4 0.320 0.320 7.489 0.000 0.000 - LGA D 228 D 228 6.653 4 0.040 0.040 6.663 0.000 0.000 - LGA S 229 S 229 6.013 2 0.106 0.106 7.057 0.000 0.000 - LGA S 230 S 230 5.742 2 0.094 0.094 5.742 0.000 0.000 - LGA P 231 P 231 4.925 3 0.572 0.572 5.137 1.818 1.039 - LGA V 232 V 232 2.949 3 0.033 0.033 3.491 52.273 29.870 - LGA A 233 A 233 2.127 1 0.307 0.307 4.160 40.909 32.727 - LGA N 234 N 234 0.846 4 0.052 0.052 3.387 55.000 27.500 - LGA S 235 S 235 7.241 2 0.649 0.649 9.872 0.455 0.303 - LGA D 236 D 236 8.940 4 0.065 0.065 8.940 0.000 0.000 - LGA G 237 G 237 6.679 0 0.101 0.101 9.412 0.000 0.000 - LGA S 238 S 238 10.548 2 0.515 0.515 13.100 0.000 0.000 - LGA A 239 A 239 14.711 1 0.694 0.694 14.711 0.000 0.000 - LGA A 240 A 240 10.523 1 0.411 0.411 12.466 0.000 0.000 - LGA E 241 E 241 6.346 5 0.406 0.406 7.249 0.455 0.202 - LGA I 242 I 242 3.146 4 0.221 0.221 4.425 13.182 6.591 - LGA R 243 R 243 3.701 7 0.138 0.138 3.892 16.818 6.116 - LGA V 244 V 244 3.488 3 0.066 0.066 4.150 13.182 7.532 - LGA S 245 S 245 5.747 2 0.054 0.054 6.136 0.000 0.000 - LGA L 246 L 246 5.967 4 0.224 0.224 6.916 0.000 0.000 - LGA R 247 R 247 5.899 7 0.042 0.042 6.047 0.000 0.000 - LGA V 248 V 248 6.574 3 0.052 0.052 6.574 0.000 0.000 - LGA Y 249 Y 249 4.853 8 0.308 0.308 5.740 1.818 0.606 - LGA G 250 G 250 2.672 0 0.264 0.264 3.316 40.455 40.455 - LGA M 251 M 251 1.291 4 0.051 0.051 1.740 58.182 29.091 - LGA T 252 T 252 2.801 3 0.173 0.173 2.801 32.727 18.701 - LGA P 253 P 253 2.586 3 0.663 0.663 2.766 43.636 24.935 - LGA T 254 T 254 5.107 3 0.589 0.589 5.107 14.545 8.312 - LGA E 255 E 255 1.978 5 0.699 0.699 3.134 30.909 13.737 - LGA Y 256 Y 256 6.699 8 0.167 0.167 7.378 0.455 0.152 - LGA L 257 L 257 7.343 4 0.142 0.142 7.343 0.000 0.000 - LGA A 258 A 258 2.488 1 0.633 0.633 3.556 31.364 25.091 - LGA P 259 P 259 1.911 3 0.658 0.658 1.911 78.636 44.935 - LGA M 260 M 260 2.565 4 0.085 0.085 3.667 32.727 16.364 - LGA N 261 N 261 3.306 4 0.078 0.078 3.306 27.727 13.864 - LGA T 262 T 262 0.434 3 0.040 0.040 1.254 82.273 47.013 - LGA V 263 V 263 2.264 3 0.133 0.133 3.373 37.273 21.299 - LGA F 264 F 264 3.328 7 0.074 0.074 3.328 22.727 8.264 - LGA N 265 N 265 1.515 4 0.093 0.093 1.714 66.364 33.182 - LGA E 266 E 266 1.876 5 0.120 0.120 3.030 44.545 19.798 - LGA W 267 W 267 4.067 10 0.077 0.077 4.403 12.273 3.506 - LGA E 268 E 268 3.167 5 0.043 0.043 3.167 25.455 11.313 - LGA K 269 K 269 1.359 5 0.546 0.546 2.830 52.273 23.232 - LGA S 270 S 270 3.614 2 0.606 0.606 4.165 15.455 10.303 - LGA E 271 E 271 3.370 5 0.111 0.111 5.376 11.364 5.051 - LGA A 272 A 272 9.549 1 0.174 0.174 11.444 0.000 0.000 - LGA A 273 A 273 7.755 1 0.264 0.264 8.648 0.000 0.000 - LGA A 274 A 274 10.753 1 0.128 0.128 11.752 0.000 0.000 - LGA V 275 V 275 13.404 3 0.044 0.044 15.389 0.000 0.000 - LGA T 276 T 276 18.654 3 0.008 0.008 19.910 0.000 0.000 - LGA P 277 P 277 22.267 3 0.148 0.148 25.028 0.000 0.000 - LGA D 278 D 278 27.892 4 0.644 0.644 29.835 0.000 0.000 - LGA G 279 G 279 28.961 0 0.656 0.656 28.961 0.000 0.000 - LGA Y 280 Y 280 23.811 8 0.561 0.561 25.510 0.000 0.000 - LGA R 281 R 281 19.622 7 0.363 0.363 21.119 0.000 0.000 - LGA V 282 V 282 12.979 3 0.041 0.041 14.996 0.000 0.000 - LGA Y 283 Y 283 9.672 8 0.161 0.161 10.936 0.000 0.000 - LGA I 284 I 284 3.025 4 0.048 0.048 5.542 9.091 4.545 - LGA N 285 N 285 2.902 4 0.590 0.590 4.379 22.273 11.136 - LGA A 286 A 286 8.375 1 0.243 0.243 10.621 0.000 0.000 - LGA V 287 V 287 14.190 3 0.654 0.654 16.907 0.000 0.000 - LGA D 288 D 288 19.538 4 0.324 0.324 23.208 0.000 0.000 - LGA K 289 K 289 26.128 5 0.620 0.620 28.017 0.000 0.000 - LGA T 290 T 290 30.564 3 0.642 0.642 33.908 0.000 0.000 - LGA D 291 D 291 34.302 4 0.682 0.682 37.835 0.000 0.000 - LGA L 292 L 292 38.821 4 0.627 0.627 40.964 0.000 0.000 - LGA T 293 T 293 45.003 3 0.515 0.515 46.818 0.000 0.000 - LGA G 294 G 294 48.273 0 0.631 0.631 49.700 0.000 0.000 - LGA I 295 I 295 48.772 4 0.703 0.703 51.339 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 97 388 388 100.00 736 388 52.72 97 0 SUMMARY(RMSD_GDC): 13.151 13.239 13.239 10.918 5.985 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 101 97 4.0 30 2.76 33.247 27.701 1.047 LGA_LOCAL RMSD: 2.764 Number of atoms: 30 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.300 Number of assigned atoms: 97 Std_ASGN_ATOMS RMSD: 13.151 Standard rmsd on all 97 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.142939 * X + -0.437053 * Y + 0.888005 * Z + -63.307709 Y_new = -0.045906 * X + 0.893325 * Y + 0.447061 * Z + 34.977337 Z_new = -0.988666 * X + -0.104668 * Y + 0.107628 * Z + 55.323902 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.310755 1.420097 -0.771456 [DEG: -17.8049 81.3656 -44.2012 ] ZXZ: 2.037195 1.462960 -1.676271 [DEG: 116.7227 83.8214 -96.0433 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1021s3TS116_5-D2 REMARK 2: T1021s3-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1021s3TS116_5-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 101 97 4.0 30 2.76 27.701 13.15 REMARK ---------------------------------------------------------- MOLECULE T1021s3TS116_5-D2 PFRMAT TS TARGET T1021s3 MODEL 5 PARENT 3fz2J 3eo7A 3rhwA 2q85A 2gjvA ATOM 777 N LEU 195 -60.995 24.669 68.946 1.00 1.00 ATOM 778 CA LEU 195 -60.109 25.732 68.586 1.00 1.00 ATOM 779 C LEU 195 -60.166 26.795 69.635 1.00 1.00 ATOM 780 O LEU 195 -59.132 27.336 70.022 1.00 1.00 ATOM 781 N SER 196 -61.376 27.120 70.129 1.00 1.00 ATOM 782 CA SER 196 -61.493 28.189 71.082 1.00 1.00 ATOM 783 C SER 196 -60.742 27.840 72.330 1.00 1.00 ATOM 784 O SER 196 -60.021 28.677 72.869 1.00 1.00 ATOM 785 N PRO 197 -60.876 26.636 72.813 1.00 1.00 ATOM 786 CA PRO 197 -60.154 26.252 73.992 1.00 1.00 ATOM 787 C PRO 197 -58.692 26.305 73.685 1.00 1.00 ATOM 788 O PRO 197 -57.882 26.542 74.578 1.00 1.00 ATOM 789 N LEU 198 -58.323 26.092 72.414 1.00 1.00 ATOM 790 CA LEU 198 -56.943 26.150 72.043 1.00 1.00 ATOM 791 C LEU 198 -56.499 27.545 72.337 1.00 1.00 ATOM 792 O LEU 198 -55.385 27.750 72.813 1.00 1.00 ATOM 793 N VAL 199 -57.386 28.519 72.054 1.00 1.00 ATOM 794 CA VAL 199 -57.077 29.905 72.239 1.00 1.00 ATOM 795 C VAL 199 -56.846 30.203 73.685 1.00 1.00 ATOM 796 O VAL 199 -55.852 30.837 74.033 1.00 1.00 ATOM 797 N ILE 200 -57.753 29.749 74.573 1.00 1.00 ATOM 798 CA ILE 200 -57.614 30.140 75.947 1.00 1.00 ATOM 799 C ILE 200 -56.370 29.549 76.522 1.00 1.00 ATOM 800 O ILE 200 -55.599 30.250 77.173 1.00 1.00 ATOM 801 N THR 201 -56.154 28.249 76.283 1.00 1.00 ATOM 802 CA THR 201 -55.024 27.576 76.842 1.00 1.00 ATOM 803 C THR 201 -53.795 28.264 76.358 1.00 1.00 ATOM 804 O THR 201 -52.848 28.443 77.121 1.00 1.00 ATOM 805 N ASP 202 -53.783 28.672 75.080 1.00 1.00 ATOM 806 CA ASP 202 -52.618 29.327 74.581 1.00 1.00 ATOM 807 C ASP 202 -52.430 30.602 75.342 1.00 1.00 ATOM 808 O ASP 202 -51.302 30.961 75.672 1.00 1.00 ATOM 809 N ALA 203 -53.531 31.319 75.646 1.00 1.00 ATOM 810 CA ALA 203 -53.437 32.598 76.293 1.00 1.00 ATOM 811 C ALA 203 -52.856 32.484 77.668 1.00 1.00 ATOM 812 O ALA 203 -51.940 33.226 78.013 1.00 1.00 ATOM 813 N LEU 204 -53.365 31.547 78.491 1.00 1.00 ATOM 814 CA LEU 204 -52.879 31.462 79.836 1.00 1.00 ATOM 815 C LEU 204 -51.430 31.126 79.775 1.00 1.00 ATOM 816 O LEU 204 -50.631 31.701 80.511 1.00 1.00 ATOM 817 N ARG 205 -51.066 30.189 78.885 1.00 1.00 ATOM 818 CA ARG 205 -49.707 29.748 78.829 1.00 1.00 ATOM 819 C ARG 205 -48.804 30.888 78.481 1.00 1.00 ATOM 820 O ARG 205 -47.784 31.090 79.139 1.00 1.00 ATOM 821 N GLU 206 -49.149 31.672 77.445 1.00 1.00 ATOM 822 CA GLU 206 -48.252 32.710 77.029 1.00 1.00 ATOM 823 C GLU 206 -48.086 33.687 78.145 1.00 1.00 ATOM 824 O GLU 206 -46.975 34.146 78.401 1.00 1.00 ATOM 825 N GLN 207 -49.188 34.019 78.836 1.00 1.00 ATOM 826 CA GLN 207 -49.103 34.997 79.874 1.00 1.00 ATOM 827 C GLN 207 -48.281 34.471 81.011 1.00 1.00 ATOM 828 O GLN 207 -47.498 35.212 81.601 1.00 1.00 ATOM 829 N LEU 208 -48.438 33.177 81.342 1.00 1.00 ATOM 830 CA LEU 208 -47.729 32.625 82.460 1.00 1.00 ATOM 831 C LEU 208 -46.259 32.669 82.183 1.00 1.00 ATOM 832 O LEU 208 -45.479 33.046 83.054 1.00 1.00 ATOM 833 N ARG 209 -45.871 32.288 80.954 1.00 1.00 ATOM 834 CA ARG 209 -44.488 32.227 80.590 1.00 1.00 ATOM 835 C ARG 209 -43.897 33.597 80.690 1.00 1.00 ATOM 836 O ARG 209 -42.843 33.771 81.298 1.00 1.00 ATOM 837 N VAL 210 -44.579 34.596 80.097 1.00 1.00 ATOM 838 CA VAL 210 -44.040 35.928 80.064 1.00 1.00 ATOM 839 C VAL 210 -43.910 36.453 81.457 1.00 1.00 ATOM 840 O VAL 210 -42.884 37.035 81.803 1.00 1.00 ATOM 841 N ALA 211 -44.943 36.256 82.292 1.00 1.00 ATOM 842 CA ALA 211 -44.881 36.768 83.625 1.00 1.00 ATOM 843 C ALA 211 -43.738 36.103 84.308 1.00 1.00 ATOM 844 O ALA 211 -43.003 36.748 85.051 1.00 1.00 ATOM 845 N LEU 212 -43.575 34.796 84.053 1.00 1.00 ATOM 846 CA LEU 212 -42.541 34.044 84.684 1.00 1.00 ATOM 847 C LEU 212 -41.241 34.453 84.077 1.00 1.00 ATOM 848 O LEU 212 -40.969 34.127 82.923 1.00 1.00 ATOM 849 N GLY 213 -40.400 35.169 84.831 1.00 1.00 ATOM 850 CA GLY 213 -39.133 35.523 84.267 1.00 1.00 ATOM 851 C GLY 213 -39.256 36.828 83.564 1.00 1.00 ATOM 852 O GLY 213 -38.327 37.250 82.880 1.00 1.00 ATOM 853 N GLY 214 -40.404 37.507 83.718 1.00 1.00 ATOM 854 CA GLY 214 -40.505 38.776 83.065 1.00 1.00 ATOM 855 C GLY 214 -39.549 39.694 83.756 1.00 1.00 ATOM 856 O GLY 214 -39.418 39.643 84.977 1.00 1.00 ATOM 857 N ASP 215 -38.861 40.563 82.986 1.00 1.00 ATOM 858 CA ASP 215 -37.950 41.475 83.612 1.00 1.00 ATOM 859 C ASP 215 -38.720 42.724 83.853 1.00 1.00 ATOM 860 O ASP 215 -38.489 43.729 83.184 1.00 1.00 ATOM 861 N TYR 216 -39.648 42.684 84.823 1.00 1.00 ATOM 862 CA TYR 216 -40.411 43.862 85.079 1.00 1.00 ATOM 863 C TYR 216 -40.764 43.807 86.528 1.00 1.00 ATOM 864 O TYR 216 -40.011 43.252 87.326 1.00 1.00 ATOM 865 N ASP 217 -41.922 44.379 86.890 1.00 1.00 ATOM 866 CA ASP 217 -42.313 44.407 88.264 1.00 1.00 ATOM 867 C ASP 217 -42.367 42.996 88.745 1.00 1.00 ATOM 868 O ASP 217 -41.914 42.702 89.849 1.00 1.00 ATOM 869 N ALA 218 -42.917 42.072 87.933 1.00 1.00 ATOM 870 CA ALA 218 -42.973 40.717 88.397 1.00 1.00 ATOM 871 C ALA 218 -41.986 39.906 87.619 1.00 1.00 ATOM 872 O ALA 218 -42.014 39.914 86.391 1.00 1.00 ATOM 873 N CYS 219 -41.105 39.190 88.345 1.00 1.00 ATOM 874 CA CYS 219 -40.139 38.308 87.762 1.00 1.00 ATOM 875 C CYS 219 -39.942 37.210 88.754 1.00 1.00 ATOM 876 O CYS 219 -39.555 37.469 89.891 1.00 1.00 ATOM 877 N LEU 220 -40.194 35.949 88.351 1.00 1.00 ATOM 878 CA LEU 220 -40.052 34.893 89.307 1.00 1.00 ATOM 879 C LEU 220 -38.600 34.800 89.640 1.00 1.00 ATOM 880 O LEU 220 -38.246 34.478 90.772 1.00 1.00 ATOM 881 N ALA 221 -37.736 35.091 88.649 1.00 1.00 ATOM 882 CA ALA 221 -36.316 35.045 88.856 1.00 1.00 ATOM 883 C ALA 221 -35.915 33.660 89.244 1.00 1.00 ATOM 884 O ALA 221 -35.032 33.486 90.082 1.00 1.00 ATOM 885 N MET 222 -36.561 32.656 88.628 1.00 1.00 ATOM 886 CA MET 222 -36.234 31.287 88.903 1.00 1.00 ATOM 887 C MET 222 -34.995 30.955 88.147 1.00 1.00 ATOM 888 O MET 222 -34.702 31.587 87.134 1.00 1.00 ATOM 889 N THR 223 -34.256 29.942 88.635 1.00 1.00 ATOM 890 CA THR 223 -33.121 29.445 87.922 1.00 1.00 ATOM 891 C THR 223 -33.573 28.677 86.707 1.00 1.00 ATOM 892 O THR 223 -33.022 28.857 85.624 1.00 1.00 ATOM 893 N HIS 224 -34.597 27.799 86.850 1.00 1.00 ATOM 894 CA HIS 224 -35.030 26.997 85.733 1.00 1.00 ATOM 895 C HIS 224 -36.512 26.809 85.790 1.00 1.00 ATOM 896 O HIS 224 -37.130 27.094 86.813 1.00 1.00 ATOM 897 N VAL 225 -37.093 26.312 84.674 1.00 1.00 ATOM 898 CA VAL 225 -38.507 26.078 84.614 1.00 1.00 ATOM 899 C VAL 225 -38.736 24.832 83.813 1.00 1.00 ATOM 900 O VAL 225 -37.997 24.564 82.867 1.00 1.00 ATOM 901 N ASN 226 -39.772 24.048 84.173 1.00 1.00 ATOM 902 CA ASN 226 -40.073 22.864 83.420 1.00 1.00 ATOM 903 C ASN 226 -41.480 23.005 82.931 1.00 1.00 ATOM 904 O ASN 226 -42.357 23.414 83.690 1.00 1.00 ATOM 905 N LEU 227 -41.744 22.665 81.651 1.00 1.00 ATOM 906 CA LEU 227 -43.095 22.770 81.175 1.00 1.00 ATOM 907 C LEU 227 -43.409 21.526 80.394 1.00 1.00 ATOM 908 O LEU 227 -42.618 21.112 79.549 1.00 1.00 ATOM 909 N ASP 228 -44.587 20.920 80.671 1.00 1.00 ATOM 910 CA ASP 228 -45.012 19.732 79.981 1.00 1.00 ATOM 911 C ASP 228 -46.459 19.899 79.616 1.00 1.00 ATOM 912 O ASP 228 -47.219 20.509 80.366 1.00 1.00 ATOM 913 N SER 229 -46.878 19.352 78.453 1.00 1.00 ATOM 914 CA SER 229 -48.268 19.415 78.087 1.00 1.00 ATOM 915 C SER 229 -48.715 18.013 77.814 1.00 1.00 ATOM 916 O SER 229 -48.172 17.355 76.928 1.00 1.00 ATOM 917 N SER 230 -49.724 17.522 78.563 1.00 1.00 ATOM 918 CA SER 230 -50.117 16.155 78.372 1.00 1.00 ATOM 919 C SER 230 -51.600 16.065 78.208 1.00 1.00 ATOM 920 O SER 230 -52.331 16.905 78.730 1.00 1.00 ATOM 921 N PRO 231 -51.946 15.034 77.489 1.00 1.00 ATOM 922 CA PRO 231 -53.291 14.647 77.152 1.00 1.00 ATOM 923 C PRO 231 -53.974 14.085 78.357 1.00 1.00 ATOM 924 O PRO 231 -55.168 13.794 78.309 1.00 1.00 ATOM 925 N VAL 232 -53.246 13.922 79.473 1.00 1.00 ATOM 926 CA VAL 232 -53.747 13.247 80.636 1.00 1.00 ATOM 927 C VAL 232 -55.066 13.802 81.072 1.00 1.00 ATOM 928 O VAL 232 -55.330 14.988 80.882 1.00 1.00 ATOM 929 N ALA 233 -55.884 12.910 81.668 1.00 1.00 ATOM 930 CA ALA 233 -57.160 13.214 82.245 1.00 1.00 ATOM 931 C ALA 233 -58.100 13.775 81.232 1.00 1.00 ATOM 932 O ALA 233 -58.957 14.588 81.570 1.00 1.00 ATOM 933 N ASN 234 -57.963 13.346 79.960 1.00 1.00 ATOM 934 CA ASN 234 -58.828 13.784 78.899 1.00 1.00 ATOM 935 C ASN 234 -59.008 15.261 78.956 1.00 1.00 ATOM 936 O ASN 234 -60.117 15.738 79.190 1.00 1.00 ATOM 937 N SER 235 -57.922 16.024 78.738 1.00 1.00 ATOM 938 CA SER 235 -58.096 17.443 78.742 1.00 1.00 ATOM 939 C SER 235 -57.607 17.981 77.439 1.00 1.00 ATOM 940 O SER 235 -56.452 17.768 77.078 1.00 1.00 ATOM 941 N ASP 236 -58.499 18.695 76.726 1.00 1.00 ATOM 942 CA ASP 236 -58.249 19.430 75.515 1.00 1.00 ATOM 943 C ASP 236 -59.515 19.380 74.724 1.00 1.00 ATOM 944 O ASP 236 -59.579 18.697 73.704 1.00 1.00 ATOM 945 N GLY 237 -60.535 20.115 75.193 1.00 1.00 ATOM 946 CA GLY 237 -61.836 20.008 74.607 1.00 1.00 ATOM 947 C GLY 237 -62.558 21.273 74.897 1.00 1.00 ATOM 948 O GLY 237 -61.978 22.352 74.793 1.00 1.00 ATOM 949 N SER 238 -63.849 21.176 75.277 1.00 1.00 ATOM 950 CA SER 238 -64.669 22.338 75.475 1.00 1.00 ATOM 951 C SER 238 -63.977 23.258 76.422 1.00 1.00 ATOM 952 O SER 238 -63.798 24.435 76.118 1.00 1.00 ATOM 953 N ALA 239 -63.557 22.762 77.600 1.00 1.00 ATOM 954 CA ALA 239 -62.833 23.671 78.429 1.00 1.00 ATOM 955 C ALA 239 -61.498 23.784 77.785 1.00 1.00 ATOM 956 O ALA 239 -61.051 22.849 77.124 1.00 1.00 ATOM 957 N ALA 240 -60.820 24.927 77.959 1.00 1.00 ATOM 958 CA ALA 240 -59.624 25.088 77.195 1.00 1.00 ATOM 959 C ALA 240 -58.443 24.615 77.959 1.00 1.00 ATOM 960 O ALA 240 -57.829 25.392 78.689 1.00 1.00 ATOM 961 N GLU 241 -58.071 23.318 77.813 1.00 1.00 ATOM 962 CA GLU 241 -56.869 22.878 78.459 1.00 1.00 ATOM 963 C GLU 241 -56.743 21.395 78.382 1.00 1.00 ATOM 964 O GLU 241 -57.747 20.697 78.261 1.00 1.00 ATOM 965 N ILE 242 -55.481 20.956 78.465 1.00 1.00 ATOM 966 CA ILE 242 -55.045 19.604 78.571 1.00 1.00 ATOM 967 C ILE 242 -54.367 19.760 79.876 1.00 1.00 ATOM 968 O ILE 242 -54.535 20.780 80.539 1.00 1.00 ATOM 969 N ARG 243 -53.561 18.812 80.352 1.00 1.00 ATOM 970 CA ARG 243 -52.991 19.250 81.586 1.00 1.00 ATOM 971 C ARG 243 -51.676 19.885 81.276 1.00 1.00 ATOM 972 O ARG 243 -50.691 19.185 81.055 1.00 1.00 ATOM 973 N VAL 244 -51.648 21.235 81.264 1.00 1.00 ATOM 974 CA VAL 244 -50.413 21.926 81.044 1.00 1.00 ATOM 975 C VAL 244 -49.793 22.123 82.380 1.00 1.00 ATOM 976 O VAL 244 -50.494 22.409 83.348 1.00 1.00 ATOM 977 N SER 245 -48.458 21.977 82.450 1.00 1.00 ATOM 978 CA SER 245 -47.790 22.217 83.689 1.00 1.00 ATOM 979 C SER 245 -46.671 23.158 83.395 1.00 1.00 ATOM 980 O SER 245 -45.827 22.867 82.549 1.00 1.00 ATOM 981 N LEU 246 -46.647 24.305 84.099 1.00 1.00 ATOM 982 CA LEU 246 -45.577 25.243 83.948 1.00 1.00 ATOM 983 C LEU 246 -45.090 25.494 85.332 1.00 1.00 ATOM 984 O LEU 246 -45.736 26.211 86.093 1.00 1.00 ATOM 985 N ARG 247 -43.931 24.912 85.699 1.00 1.00 ATOM 986 CA ARG 247 -43.466 25.101 87.037 1.00 1.00 ATOM 987 C ARG 247 -42.170 25.824 86.994 1.00 1.00 ATOM 988 O ARG 247 -41.286 25.459 86.223 1.00 1.00 ATOM 989 N VAL 248 -42.063 26.856 87.843 1.00 1.00 ATOM 990 CA VAL 248 -40.877 27.633 87.873 1.00 1.00 ATOM 991 C VAL 248 -40.621 27.822 89.331 1.00 1.00 ATOM 992 O VAL 248 -41.502 28.276 90.057 1.00 1.00 ATOM 993 N TYR 249 -39.416 27.493 89.838 1.00 1.00 ATOM 994 CA TYR 249 -39.370 27.640 91.259 1.00 1.00 ATOM 995 C TYR 249 -38.621 28.870 91.612 1.00 1.00 ATOM 996 O TYR 249 -37.424 28.807 91.884 1.00 1.00 ATOM 997 N GLY 250 -39.361 29.985 91.606 1.00 1.00 ATOM 998 CA GLY 250 -38.864 31.272 91.955 1.00 1.00 ATOM 999 C GLY 250 -39.863 31.759 92.940 1.00 1.00 ATOM 1000 O GLY 250 -40.749 31.008 93.344 1.00 1.00 ATOM 1001 N MET 251 -39.755 33.031 93.352 1.00 1.00 ATOM 1002 CA MET 251 -40.711 33.513 94.296 1.00 1.00 ATOM 1003 C MET 251 -41.643 34.352 93.499 1.00 1.00 ATOM 1004 O MET 251 -41.208 35.087 92.615 1.00 1.00 ATOM 1005 N THR 252 -42.958 34.270 93.795 1.00 1.00 ATOM 1006 CA THR 252 -43.942 34.990 93.039 1.00 1.00 ATOM 1007 C THR 252 -43.922 36.438 93.418 1.00 1.00 ATOM 1008 O THR 252 -44.084 36.771 94.590 1.00 1.00 ATOM 1009 N PRO 253 -43.733 37.214 92.393 1.00 1.00 ATOM 1010 CA PRO 253 -43.644 38.641 92.521 1.00 1.00 ATOM 1011 C PRO 253 -44.985 39.247 92.719 1.00 1.00 ATOM 1012 O PRO 253 -45.094 40.456 92.907 1.00 1.00 ATOM 1013 N THR 254 -46.057 38.428 92.692 1.00 1.00 ATOM 1014 CA THR 254 -47.415 38.895 92.693 1.00 1.00 ATOM 1015 C THR 254 -47.607 40.008 93.653 1.00 1.00 ATOM 1016 O THR 254 -47.284 39.869 94.829 1.00 1.00 ATOM 1017 N GLU 255 -48.149 41.109 93.104 1.00 1.00 ATOM 1018 CA GLU 255 -48.458 42.288 93.837 1.00 1.00 ATOM 1019 C GLU 255 -49.718 41.965 94.558 1.00 1.00 ATOM 1020 O GLU 255 -50.489 41.122 94.104 1.00 1.00 ATOM 1021 N TYR 256 -49.952 42.634 95.695 1.00 1.00 ATOM 1022 CA TYR 256 -51.121 42.353 96.463 1.00 1.00 ATOM 1023 C TYR 256 -52.310 42.765 95.660 1.00 1.00 ATOM 1024 O TYR 256 -53.335 42.088 95.686 1.00 1.00 ATOM 1025 N LEU 257 -52.184 43.885 94.924 1.00 1.00 ATOM 1026 CA LEU 257 -53.328 44.434 94.257 1.00 1.00 ATOM 1027 C LEU 257 -53.916 43.431 93.313 1.00 1.00 ATOM 1028 O LEU 257 -55.102 43.123 93.401 1.00 1.00 ATOM 1029 N ALA 258 -53.139 42.861 92.368 1.00 1.00 ATOM 1030 CA ALA 258 -53.820 41.916 91.525 1.00 1.00 ATOM 1031 C ALA 258 -52.847 41.159 90.681 1.00 1.00 ATOM 1032 O ALA 258 -51.887 41.738 90.177 1.00 1.00 ATOM 1033 N PRO 259 -53.154 39.895 90.565 1.00 1.00 ATOM 1034 CA PRO 259 -52.344 39.025 89.754 1.00 1.00 ATOM 1035 C PRO 259 -52.781 38.943 88.321 1.00 1.00 ATOM 1036 O PRO 259 -53.902 39.328 87.995 1.00 1.00 ATOM 1037 N MET 260 -51.884 38.427 87.453 1.00 1.00 ATOM 1038 CA MET 260 -52.136 38.102 86.077 1.00 1.00 ATOM 1039 C MET 260 -53.027 36.906 86.137 1.00 1.00 ATOM 1040 O MET 260 -53.843 36.700 85.240 1.00 1.00 ATOM 1041 N ASN 261 -52.835 36.146 87.231 1.00 1.00 ATOM 1042 CA ASN 261 -53.449 34.895 87.555 1.00 1.00 ATOM 1043 C ASN 261 -54.932 35.045 87.602 1.00 1.00 ATOM 1044 O ASN 261 -55.657 34.126 87.228 1.00 1.00 ATOM 1045 N THR 262 -55.425 36.212 88.058 1.00 1.00 ATOM 1046 CA THR 262 -56.843 36.397 88.169 1.00 1.00 ATOM 1047 C THR 262 -57.441 36.165 86.821 1.00 1.00 ATOM 1048 O THR 262 -58.498 35.548 86.714 1.00 1.00 ATOM 1049 N VAL 263 -56.760 36.656 85.775 1.00 1.00 ATOM 1050 CA VAL 263 -57.248 36.490 84.444 1.00 1.00 ATOM 1051 C VAL 263 -57.276 35.032 84.111 1.00 1.00 ATOM 1052 O VAL 263 -58.258 34.544 83.558 1.00 1.00 ATOM 1053 N PHE 264 -56.192 34.308 84.450 1.00 1.00 ATOM 1054 CA PHE 264 -56.079 32.928 84.075 1.00 1.00 ATOM 1055 C PHE 264 -57.158 32.126 84.722 1.00 1.00 ATOM 1056 O PHE 264 -57.856 31.372 84.046 1.00 1.00 ATOM 1057 N ASN 265 -57.319 32.279 86.049 1.00 1.00 ATOM 1058 CA ASN 265 -58.244 31.439 86.745 1.00 1.00 ATOM 1059 C ASN 265 -59.627 31.690 86.258 1.00 1.00 ATOM 1060 O ASN 265 -60.396 30.749 86.072 1.00 1.00 ATOM 1061 N GLU 266 -59.984 32.965 86.032 1.00 1.00 ATOM 1062 CA GLU 266 -61.332 33.253 85.648 1.00 1.00 ATOM 1063 C GLU 266 -61.632 32.535 84.374 1.00 1.00 ATOM 1064 O GLU 266 -62.710 31.963 84.227 1.00 1.00 ATOM 1065 N TRP 267 -60.682 32.539 83.418 1.00 1.00 ATOM 1066 CA TRP 267 -60.964 31.927 82.149 1.00 1.00 ATOM 1067 C TRP 267 -61.170 30.452 82.317 1.00 1.00 ATOM 1068 O TRP 267 -62.183 29.918 81.873 1.00 1.00 ATOM 1069 N GLU 268 -60.211 29.774 82.969 1.00 1.00 ATOM 1070 CA GLU 268 -60.269 28.346 83.058 1.00 1.00 ATOM 1071 C GLU 268 -61.522 27.961 83.771 1.00 1.00 ATOM 1072 O GLU 268 -62.162 26.976 83.405 1.00 1.00 ATOM 1073 N LYS 269 -61.898 28.741 84.800 1.00 1.00 ATOM 1074 CA LYS 269 -63.044 28.437 85.609 1.00 1.00 ATOM 1075 C LYS 269 -64.277 28.408 84.762 1.00 1.00 ATOM 1076 O LYS 269 -65.096 27.502 84.896 1.00 1.00 ATOM 1077 N SER 270 -64.440 29.397 83.862 1.00 1.00 ATOM 1078 CA SER 270 -65.634 29.463 83.064 1.00 1.00 ATOM 1079 C SER 270 -65.657 28.257 82.189 1.00 1.00 ATOM 1080 O SER 270 -66.730 27.754 81.861 1.00 1.00 ATOM 1081 N GLU 271 -64.454 27.798 81.824 1.00 1.00 ATOM 1082 CA GLU 271 -64.214 26.659 80.995 1.00 1.00 ATOM 1083 C GLU 271 -64.661 25.451 81.746 1.00 1.00 ATOM 1084 O GLU 271 -64.841 24.389 81.155 1.00 1.00 ATOM 1085 N ALA 272 -64.860 25.584 83.074 1.00 1.00 ATOM 1086 CA ALA 272 -65.161 24.447 83.893 1.00 1.00 ATOM 1087 C ALA 272 -63.909 23.648 83.930 1.00 1.00 ATOM 1088 O ALA 272 -63.962 22.422 84.004 1.00 1.00 ATOM 1089 N ALA 273 -62.804 24.408 83.882 1.00 1.00 ATOM 1090 CA ALA 273 -61.443 23.986 83.911 1.00 1.00 ATOM 1091 C ALA 273 -60.903 24.587 85.176 1.00 1.00 ATOM 1092 O ALA 273 -61.580 25.393 85.811 1.00 1.00 ATOM 1093 N ALA 274 -59.670 24.237 85.597 1.00 1.00 ATOM 1094 CA ALA 274 -59.206 24.814 86.833 1.00 1.00 ATOM 1095 C ALA 274 -57.739 25.110 86.740 1.00 1.00 ATOM 1096 O ALA 274 -57.064 24.603 85.846 1.00 1.00 ATOM 1097 N VAL 275 -57.228 25.939 87.681 1.00 1.00 ATOM 1098 CA VAL 275 -55.820 26.238 87.742 1.00 1.00 ATOM 1099 C VAL 275 -55.409 26.291 89.193 1.00 1.00 ATOM 1100 O VAL 275 -56.175 26.756 90.034 1.00 1.00 ATOM 1101 N THR 276 -54.179 25.818 89.520 1.00 1.00 ATOM 1102 CA THR 276 -53.719 25.828 90.890 1.00 1.00 ATOM 1103 C THR 276 -52.324 26.394 90.966 1.00 1.00 ATOM 1104 O THR 276 -51.464 26.023 90.171 1.00 1.00 ATOM 1105 N PRO 277 -52.131 27.273 91.925 1.00 1.00 ATOM 1106 CA PRO 277 -50.836 27.903 92.120 1.00 1.00 ATOM 1107 C PRO 277 -49.862 27.168 93.013 1.00 1.00 ATOM 1108 O PRO 277 -50.255 26.254 93.733 1.00 1.00 ATOM 1109 N ASP 278 -48.564 27.571 92.975 1.00 1.00 ATOM 1110 CA ASP 278 -47.506 27.078 93.831 1.00 1.00 ATOM 1111 C ASP 278 -46.531 28.219 93.993 1.00 1.00 ATOM 1112 O ASP 278 -46.912 29.293 94.456 1.00 1.00 ATOM 1113 N GLY 279 -45.244 28.022 93.611 1.00 1.00 ATOM 1114 CA GLY 279 -44.294 29.098 93.604 1.00 1.00 ATOM 1115 C GLY 279 -44.742 29.805 92.383 1.00 1.00 ATOM 1116 O GLY 279 -45.881 30.261 92.318 1.00 1.00 ATOM 1117 N TYR 280 -43.903 29.938 91.354 1.00 1.00 ATOM 1118 CA TYR 280 -44.637 30.409 90.230 1.00 1.00 ATOM 1119 C TYR 280 -44.891 29.162 89.457 1.00 1.00 ATOM 1120 O TYR 280 -44.236 28.920 88.444 1.00 1.00 ATOM 1121 N ARG 281 -45.860 28.359 89.934 1.00 1.00 ATOM 1122 CA ARG 281 -46.136 27.133 89.255 1.00 1.00 ATOM 1123 C ARG 281 -47.582 27.143 88.937 1.00 1.00 ATOM 1124 O ARG 281 -48.402 27.441 89.802 1.00 1.00 ATOM 1125 N VAL 282 -47.924 26.809 87.684 1.00 1.00 ATOM 1126 CA VAL 282 -49.313 26.825 87.379 1.00 1.00 ATOM 1127 C VAL 282 -49.678 25.525 86.763 1.00 1.00 ATOM 1128 O VAL 282 -48.985 25.051 85.867 1.00 1.00 ATOM 1129 N TYR 283 -50.786 24.955 87.253 1.00 1.00 ATOM 1130 CA TYR 283 -51.293 23.762 86.662 1.00 1.00 ATOM 1131 C TYR 283 -52.564 24.187 86.032 1.00 1.00 ATOM 1132 O TYR 283 -53.488 24.602 86.728 1.00 1.00 ATOM 1133 N ILE 284 -52.636 24.085 84.695 1.00 1.00 ATOM 1134 CA ILE 284 -53.841 24.500 84.057 1.00 1.00 ATOM 1135 C ILE 284 -54.441 23.274 83.464 1.00 1.00 ATOM 1136 O ILE 284 -53.750 22.511 82.795 1.00 1.00 ATOM 1137 N ASN 285 -55.750 23.081 83.703 1.00 1.00 ATOM 1138 CA ASN 285 -56.426 21.948 83.150 1.00 1.00 ATOM 1139 C ASN 285 -57.753 22.419 82.668 1.00 1.00 ATOM 1140 O ASN 285 -58.265 23.425 83.156 1.00 1.00 ATOM 1141 N ALA 286 -58.347 21.692 81.696 1.00 1.00 ATOM 1142 CA ALA 286 -59.656 21.997 81.186 1.00 1.00 ATOM 1143 C ALA 286 -60.173 20.756 80.533 1.00 1.00 ATOM 1144 O ALA 286 -59.402 19.843 80.249 1.00 1.00 ATOM 1145 N VAL 287 -61.491 20.709 80.277 1.00 1.00 ATOM 1146 CA VAL 287 -62.108 19.548 79.707 1.00 1.00 ATOM 1147 C VAL 287 -61.711 19.412 78.276 1.00 1.00 ATOM 1148 O VAL 287 -61.554 20.415 77.583 1.00 1.00 ATOM 1149 N ASP 288 -61.555 18.143 77.839 1.00 1.00 ATOM 1150 CA ASP 288 -61.165 17.719 76.523 1.00 1.00 ATOM 1151 C ASP 288 -62.404 17.277 75.817 1.00 1.00 ATOM 1152 O ASP 288 -63.358 18.044 75.709 1.00 1.00 ATOM 1153 N LYS 289 -62.376 16.019 75.341 1.00 1.00 ATOM 1154 CA LYS 289 -63.454 15.463 74.591 1.00 1.00 ATOM 1155 C LYS 289 -63.875 14.212 75.284 1.00 1.00 ATOM 1156 O LYS 289 -63.156 13.715 76.148 1.00 1.00 ATOM 1157 N THR 290 -65.054 13.690 74.897 1.00 1.00 ATOM 1158 CA THR 290 -65.556 12.480 75.473 1.00 1.00 ATOM 1159 C THR 290 -64.804 11.346 74.858 1.00 1.00 ATOM 1160 O THR 290 -64.200 11.509 73.800 1.00 1.00 ATOM 1161 N ASP 291 -64.837 10.172 75.516 1.00 1.00 ATOM 1162 CA ASP 291 -64.121 9.038 75.016 1.00 1.00 ATOM 1163 C ASP 291 -64.938 8.400 73.945 1.00 1.00 ATOM 1164 O ASP 291 -66.155 8.573 73.912 1.00 1.00 ATOM 1165 N LEU 292 -64.260 7.643 73.059 1.00 1.00 ATOM 1166 CA LEU 292 -64.920 6.908 72.023 1.00 1.00 ATOM 1167 C LEU 292 -64.399 5.512 72.108 1.00 1.00 ATOM 1168 O LEU 292 -63.344 5.282 72.694 1.00 1.00 ATOM 1169 N THR 293 -65.133 4.553 71.514 1.00 1.00 ATOM 1170 CA THR 293 -64.723 3.181 71.569 1.00 1.00 ATOM 1171 C THR 293 -63.730 2.982 70.466 1.00 1.00 ATOM 1172 O THR 293 -63.553 3.863 69.628 1.00 1.00 ATOM 1173 N GLY 294 -63.068 1.808 70.446 1.00 1.00 ATOM 1174 CA GLY 294 -62.103 1.508 69.432 1.00 1.00 ATOM 1175 C GLY 294 -60.743 1.570 70.043 1.00 1.00 ATOM 1176 O GLY 294 -59.792 1.026 69.487 1.00 1.00 ATOM 1177 N ILE 295 -60.618 2.232 71.206 1.00 1.00 ATOM 1178 CA ILE 295 -59.335 2.274 71.836 1.00 1.00 ATOM 1179 C ILE 295 -59.486 1.600 73.193 1.00 1.00 ATOM 1180 O ILE 295 -60.595 1.151 73.533 1.00 1.00 TER END