####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 101 ( 404), selected 97 , name T1021s3TS116_4-D2 # Molecule2: number of CA atoms 97 ( 736), selected 97 , name T1021s3-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1021s3TS116_4-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 70 195 - 268 4.97 6.33 LCS_AVERAGE: 63.83 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 254 - 271 1.79 10.84 LCS_AVERAGE: 12.79 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 255 - 270 0.81 10.82 LCS_AVERAGE: 8.94 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 97 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT L 195 L 195 3 4 70 3 5 6 10 12 14 18 27 33 46 53 62 72 79 80 85 88 91 92 93 LCS_GDT S 196 S 196 3 17 70 3 3 3 10 15 23 27 33 38 46 53 61 72 79 80 85 88 91 92 93 LCS_GDT P 197 P 197 15 17 70 4 6 13 17 20 23 34 41 43 48 50 63 72 79 80 85 88 91 92 93 LCS_GDT L 198 L 198 15 17 70 4 12 17 19 25 28 34 41 44 50 57 64 72 79 80 85 88 91 92 93 LCS_GDT V 199 V 199 15 17 70 7 14 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT I 200 I 200 15 17 70 7 14 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT T 201 T 201 15 17 70 7 14 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT D 202 D 202 15 17 70 7 14 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT A 203 A 203 15 17 70 7 14 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT L 204 L 204 15 17 70 6 14 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT R 205 R 205 15 17 70 6 14 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT E 206 E 206 15 17 70 5 14 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT Q 207 Q 207 15 17 70 6 14 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT L 208 L 208 15 17 70 4 14 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT R 209 R 209 15 17 70 7 14 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT V 210 V 210 15 17 70 5 14 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT A 211 A 211 15 17 70 7 14 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT L 212 L 212 14 17 70 3 9 16 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT D 217 D 217 3 6 70 1 3 6 11 15 17 20 28 38 47 52 59 61 70 77 81 83 88 92 93 LCS_GDT A 218 A 218 3 6 70 1 3 6 11 15 17 24 31 43 50 57 63 70 77 79 84 86 89 92 93 LCS_GDT C 219 C 219 3 6 70 1 3 5 8 12 14 18 26 40 48 56 59 70 73 77 83 85 88 92 93 LCS_GDT L 220 L 220 3 4 70 3 3 7 9 15 22 31 37 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT A 221 A 221 3 10 70 3 9 11 14 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT M 222 M 222 4 10 70 3 9 11 14 23 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT T 223 T 223 4 10 70 3 3 6 10 15 27 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT H 224 H 224 7 11 70 4 6 15 20 24 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT V 225 V 225 7 11 70 4 6 8 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT N 226 N 226 7 11 70 4 11 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT L 227 L 227 7 11 70 4 6 8 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT D 228 D 228 7 11 70 4 12 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT S 229 S 229 7 11 70 4 14 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT S 230 S 230 7 11 70 5 14 16 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT P 231 P 231 6 11 70 3 6 9 17 25 28 32 39 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT V 232 V 232 6 11 70 3 6 8 15 22 28 32 37 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT A 233 A 233 6 11 70 3 6 8 15 21 26 32 37 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT N 234 N 234 6 11 70 3 5 7 10 13 15 17 30 36 49 57 65 71 79 80 85 88 91 92 93 LCS_GDT S 235 S 235 4 5 70 3 4 5 14 22 28 32 37 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT D 236 D 236 4 5 70 3 4 5 11 20 26 31 37 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT G 237 G 237 5 5 70 3 4 10 17 25 28 32 37 44 50 57 64 72 79 80 85 88 91 92 93 LCS_GDT S 238 S 238 5 5 70 3 4 11 17 25 28 32 37 44 50 57 63 72 79 80 85 88 91 92 93 LCS_GDT A 239 A 239 5 12 70 3 7 9 14 22 28 32 37 44 50 57 63 72 79 80 85 88 91 92 93 LCS_GDT A 240 A 240 6 12 70 3 7 10 12 16 24 29 37 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT E 241 E 241 6 12 70 3 5 6 10 14 15 23 36 41 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT I 242 I 242 8 12 70 3 9 11 14 20 26 32 37 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT R 243 R 243 8 12 70 3 7 11 14 20 26 32 37 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT V 244 V 244 8 12 70 3 6 10 12 17 28 32 37 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT S 245 S 245 8 12 70 3 6 10 12 15 24 27 37 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT L 246 L 246 8 12 70 4 6 10 12 15 24 27 37 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT R 247 R 247 8 12 70 4 7 10 12 15 24 27 37 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT V 248 V 248 8 12 70 4 7 10 12 15 24 27 37 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT Y 249 Y 249 8 12 70 4 7 10 12 15 24 25 36 43 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT G 250 G 250 7 12 70 3 6 9 11 15 22 23 29 41 48 57 65 71 79 80 85 88 91 92 93 LCS_GDT M 251 M 251 7 12 70 3 5 9 11 15 24 25 36 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT T 252 T 252 6 12 70 3 4 9 11 13 17 19 29 44 50 57 65 71 79 80 85 88 91 92 93 LCS_GDT P 253 P 253 6 12 70 3 6 9 11 15 17 20 33 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT T 254 T 254 4 18 70 2 4 7 16 21 27 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT E 255 E 255 16 18 70 7 13 16 17 20 25 31 41 44 49 57 64 72 79 80 85 88 91 92 93 LCS_GDT Y 256 Y 256 16 18 70 4 12 16 17 20 26 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT L 257 L 257 16 18 70 4 12 16 17 20 27 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT A 258 A 258 16 18 70 4 10 16 17 19 22 25 38 44 49 57 65 72 79 80 85 88 91 92 93 LCS_GDT P 259 P 259 16 18 70 4 13 16 17 19 22 25 28 35 48 57 65 72 79 80 85 88 91 92 93 LCS_GDT M 260 M 260 16 18 70 9 13 16 17 19 22 25 36 44 49 57 65 72 79 80 85 88 91 92 93 LCS_GDT N 261 N 261 16 18 70 9 13 16 17 19 22 30 38 44 49 57 65 72 79 80 85 88 91 92 93 LCS_GDT T 262 T 262 16 18 70 9 13 16 17 19 22 25 31 40 49 57 65 71 79 80 85 88 91 92 93 LCS_GDT V 263 V 263 16 18 70 9 13 16 17 19 22 25 31 40 49 57 65 71 79 80 85 88 91 92 93 LCS_GDT F 264 F 264 16 18 70 9 13 16 17 19 22 25 32 41 49 57 65 72 79 80 85 88 91 92 93 LCS_GDT N 265 N 265 16 18 70 9 13 16 17 19 22 25 31 40 49 57 65 71 79 80 85 88 91 92 93 LCS_GDT E 266 E 266 16 18 70 9 13 16 17 19 22 25 31 40 49 57 65 70 75 80 85 88 91 92 93 LCS_GDT W 267 W 267 16 18 70 9 13 16 17 19 22 25 31 40 49 57 65 70 78 80 85 88 91 92 93 LCS_GDT E 268 E 268 16 18 70 9 13 16 17 19 22 25 31 40 49 57 65 70 75 80 85 88 91 92 93 LCS_GDT K 269 K 269 16 18 67 3 13 16 17 18 22 25 27 33 45 54 60 66 71 75 79 86 89 91 93 LCS_GDT S 270 S 270 16 18 40 6 13 16 17 19 22 25 29 34 43 51 56 66 71 75 78 81 85 91 93 LCS_GDT E 271 E 271 4 18 40 4 4 5 11 15 22 25 29 33 39 48 56 65 71 75 78 81 84 90 92 LCS_GDT A 272 A 272 4 4 40 4 4 5 6 10 16 23 34 40 49 57 65 72 79 80 85 88 91 92 93 LCS_GDT A 273 A 273 4 5 40 4 4 5 5 8 12 22 33 41 49 57 65 70 79 80 85 88 91 92 93 LCS_GDT A 274 A 274 3 5 40 3 3 4 4 5 9 11 15 26 30 33 44 60 70 78 85 88 91 92 93 LCS_GDT V 275 V 275 3 5 40 3 3 4 7 11 14 18 22 23 27 34 47 54 63 78 83 88 91 92 93 LCS_GDT T 276 T 276 3 5 40 3 3 6 8 12 15 18 22 27 34 45 53 68 76 80 85 88 91 92 93 LCS_GDT P 277 P 277 4 5 40 3 4 4 7 9 14 16 20 27 31 36 47 56 62 70 81 85 91 92 93 LCS_GDT D 278 D 278 4 5 40 3 4 7 9 13 15 18 22 27 34 45 52 60 73 80 83 88 91 92 93 LCS_GDT G 279 G 279 4 10 40 3 4 4 4 13 15 18 22 27 35 45 56 68 77 80 85 88 91 92 93 LCS_GDT Y 280 Y 280 4 11 40 3 4 6 9 11 14 18 22 24 31 36 49 59 77 78 83 88 91 92 93 LCS_GDT R 281 R 281 5 11 40 4 5 6 9 12 15 18 22 27 31 36 49 59 70 77 83 88 91 92 93 LCS_GDT V 282 V 282 5 11 40 4 5 7 9 13 15 18 22 27 31 39 51 62 77 80 85 88 91 92 93 LCS_GDT Y 283 Y 283 6 11 40 4 5 7 10 13 15 19 27 35 40 49 63 72 79 80 85 88 91 92 93 LCS_GDT I 284 I 284 6 11 40 4 5 7 10 14 23 30 41 44 49 56 64 72 79 80 85 88 91 92 93 LCS_GDT N 285 N 285 6 11 40 4 5 13 16 21 27 34 41 44 49 57 65 72 79 80 85 88 91 92 93 LCS_GDT A 286 A 286 6 11 40 3 5 8 13 21 27 34 41 44 49 57 65 72 79 80 85 88 91 92 93 LCS_GDT V 287 V 287 6 11 40 3 5 7 17 20 27 34 41 44 49 57 65 72 79 80 85 88 91 92 93 LCS_GDT D 288 D 288 6 11 40 3 5 7 13 20 23 34 41 44 49 57 65 72 79 80 85 88 91 92 93 LCS_GDT K 289 K 289 6 11 40 3 4 8 16 20 27 34 41 44 49 57 65 72 79 80 85 88 91 92 93 LCS_GDT T 290 T 290 5 11 40 3 4 11 16 21 27 34 41 44 49 57 65 72 79 80 85 88 91 92 93 LCS_GDT D 291 D 291 5 11 40 3 4 8 15 21 27 34 41 44 49 57 65 72 79 80 85 88 91 92 93 LCS_GDT L 292 L 292 5 10 40 3 4 7 13 20 23 32 41 44 49 57 65 72 79 80 85 88 91 92 93 LCS_GDT T 293 T 293 4 10 40 3 4 7 16 21 27 34 41 44 49 57 65 72 79 80 85 88 91 92 93 LCS_GDT G 294 G 294 4 9 40 3 4 4 7 8 22 34 41 44 50 57 65 72 79 80 85 88 91 92 93 LCS_GDT I 295 I 295 3 8 39 3 3 7 11 19 23 30 38 43 49 57 65 72 79 80 85 88 91 92 93 LCS_AVERAGE LCS_A: 28.52 ( 8.94 12.79 63.83 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 14 17 20 25 28 34 41 44 50 57 65 72 79 80 85 88 91 92 93 GDT PERCENT_AT 9.28 14.43 17.53 20.62 25.77 28.87 35.05 42.27 45.36 51.55 58.76 67.01 74.23 81.44 82.47 87.63 90.72 93.81 94.85 95.88 GDT RMS_LOCAL 0.28 0.64 0.89 1.24 1.70 1.89 2.35 2.65 2.90 3.59 3.87 4.27 4.56 4.84 4.88 5.17 5.38 5.56 5.60 5.66 GDT RMS_ALL_AT 11.20 8.07 7.92 7.28 7.67 7.45 7.40 7.33 7.01 6.85 6.71 6.33 6.13 6.07 6.07 6.03 6.02 6.04 6.02 6.03 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA L 195 L 195 8.075 4 0.218 0.218 8.075 2.727 1.364 - LGA S 196 S 196 5.379 2 0.149 0.149 6.664 3.182 2.121 - LGA P 197 P 197 3.403 3 0.621 0.621 3.403 20.455 11.688 - LGA L 198 L 198 2.701 4 0.025 0.025 3.015 36.818 18.409 - LGA V 199 V 199 1.406 3 0.026 0.026 1.858 74.545 42.597 - LGA I 200 I 200 0.581 4 0.070 0.070 0.941 90.909 45.455 - LGA T 201 T 201 1.131 3 0.041 0.041 1.131 77.727 44.416 - LGA D 202 D 202 1.157 4 0.210 0.210 1.236 69.545 34.773 - LGA A 203 A 203 1.035 1 0.053 0.053 1.390 73.636 58.909 - LGA L 204 L 204 1.570 4 0.211 0.211 1.570 65.909 32.955 - LGA R 205 R 205 1.332 7 0.058 0.058 1.481 65.455 23.802 - LGA E 206 E 206 1.014 5 0.267 0.267 2.414 59.091 26.263 - LGA Q 207 Q 207 2.290 5 0.053 0.053 2.917 35.909 15.960 - LGA L 208 L 208 2.844 4 0.061 0.061 2.844 32.727 16.364 - LGA R 209 R 209 1.193 7 0.024 0.024 1.637 65.909 23.967 - LGA V 210 V 210 1.526 3 0.040 0.040 1.670 54.545 31.169 - LGA A 211 A 211 2.244 1 0.114 0.114 2.244 59.091 47.273 - LGA L 212 L 212 0.937 4 0.145 0.145 1.110 77.727 38.864 - LGA D 217 D 217 11.706 4 0.227 0.227 11.959 0.000 0.000 - LGA A 218 A 218 8.027 1 0.668 0.668 9.169 0.000 0.000 - LGA C 219 C 219 8.857 2 0.628 0.628 10.327 0.000 0.000 - LGA L 220 L 220 6.063 4 0.675 0.675 6.558 1.364 0.682 - LGA A 221 A 221 3.840 1 0.591 0.591 4.101 11.364 9.091 - LGA M 222 M 222 3.598 4 0.482 0.482 5.179 10.000 5.000 - LGA T 223 T 223 3.420 3 0.030 0.030 3.916 18.636 10.649 - LGA H 224 H 224 2.767 6 0.619 0.619 4.044 22.273 8.909 - LGA V 225 V 225 3.684 3 0.083 0.083 3.684 20.909 11.948 - LGA N 226 N 226 1.761 4 0.610 0.610 2.438 51.364 25.682 - LGA L 227 L 227 3.699 4 0.326 0.326 3.871 15.000 7.500 - LGA D 228 D 228 1.442 4 0.133 0.133 2.053 51.364 25.682 - LGA S 229 S 229 2.487 2 0.143 0.143 2.582 32.727 21.818 - LGA S 230 S 230 3.462 2 0.042 0.042 3.953 16.818 11.212 - LGA P 231 P 231 5.464 3 0.132 0.132 6.922 0.455 0.260 - LGA V 232 V 232 7.691 3 0.184 0.184 8.374 0.000 0.000 - LGA A 233 A 233 9.757 1 0.105 0.105 11.000 0.000 0.000 - LGA N 234 N 234 13.980 4 0.528 0.528 13.980 0.000 0.000 - LGA S 235 S 235 11.668 2 0.652 0.652 12.413 0.000 0.000 - LGA D 236 D 236 11.699 4 0.455 0.455 12.207 0.000 0.000 - LGA G 237 G 237 9.547 0 0.078 0.078 9.850 0.000 0.000 - LGA S 238 S 238 9.634 2 0.362 0.362 9.634 0.000 0.000 - LGA A 239 A 239 9.758 1 0.648 0.648 10.201 0.000 0.000 - LGA A 240 A 240 10.954 1 0.263 0.263 10.954 0.000 0.000 - LGA E 241 E 241 12.192 5 0.235 0.235 12.192 0.000 0.000 - LGA I 242 I 242 8.836 4 0.080 0.080 9.861 0.000 0.000 - LGA R 243 R 243 9.321 7 0.059 0.059 9.321 0.000 0.000 - LGA V 244 V 244 6.476 3 0.049 0.049 7.133 0.000 0.000 - LGA S 245 S 245 7.710 2 0.130 0.130 7.710 0.000 0.000 - LGA L 246 L 246 6.987 4 0.083 0.083 8.130 0.000 0.000 - LGA R 247 R 247 8.060 7 0.061 0.061 8.060 0.000 0.000 - LGA V 248 V 248 7.568 3 0.070 0.070 8.159 0.000 0.000 - LGA Y 249 Y 249 9.006 8 0.034 0.034 9.107 0.000 0.000 - LGA G 250 G 250 9.638 0 0.300 0.300 9.638 0.000 0.000 - LGA M 251 M 251 8.692 4 0.151 0.151 9.718 0.000 0.000 - LGA T 252 T 252 7.860 3 0.038 0.038 7.860 0.000 0.000 - LGA P 253 P 253 6.111 3 0.661 0.661 6.829 0.455 0.260 - LGA T 254 T 254 2.979 3 0.583 0.583 3.315 34.545 19.740 - LGA E 255 E 255 3.708 5 0.662 0.662 3.708 26.818 11.919 - LGA Y 256 Y 256 3.329 8 0.295 0.295 3.711 14.545 4.848 - LGA L 257 L 257 2.794 4 0.094 0.094 3.734 20.909 10.455 - LGA A 258 A 258 5.256 1 0.050 0.050 6.562 1.364 1.091 - LGA P 259 P 259 6.672 3 0.080 0.080 7.165 0.000 0.000 - LGA M 260 M 260 5.131 4 0.116 0.116 5.314 0.455 0.227 - LGA N 261 N 261 4.765 4 0.155 0.155 6.504 0.909 0.455 - LGA T 262 T 262 7.123 3 0.033 0.033 7.929 0.000 0.000 - LGA V 263 V 263 7.473 3 0.151 0.151 7.473 0.000 0.000 - LGA F 264 F 264 6.345 7 0.019 0.019 6.840 0.000 0.000 - LGA N 265 N 265 7.441 4 0.102 0.102 8.972 0.000 0.000 - LGA E 266 E 266 9.105 5 0.080 0.080 9.518 0.000 0.000 - LGA W 267 W 267 8.285 10 0.106 0.106 8.665 0.000 0.000 - LGA E 268 E 268 8.095 5 0.049 0.049 9.328 0.000 0.000 - LGA K 269 K 269 10.073 5 0.537 0.537 12.474 0.000 0.000 - LGA S 270 S 270 11.938 2 0.596 0.596 12.474 0.000 0.000 - LGA E 271 E 271 14.278 5 0.075 0.075 14.278 0.000 0.000 - LGA A 272 A 272 9.559 1 0.517 0.517 10.832 0.000 0.000 - LGA A 273 A 273 7.180 1 0.380 0.380 11.541 0.000 0.000 - LGA A 274 A 274 10.732 1 0.541 0.541 11.647 0.000 0.000 - LGA V 275 V 275 12.630 3 0.674 0.674 12.630 0.000 0.000 - LGA T 276 T 276 10.949 3 0.623 0.623 14.548 0.000 0.000 - LGA P 277 P 277 13.158 3 0.633 0.633 13.184 0.000 0.000 - LGA D 278 D 278 14.429 4 0.438 0.438 14.749 0.000 0.000 - LGA G 279 G 279 13.799 0 0.605 0.605 13.811 0.000 0.000 - LGA Y 280 Y 280 10.935 8 0.072 0.072 12.180 0.000 0.000 - LGA R 281 R 281 12.318 7 0.168 0.168 12.473 0.000 0.000 - LGA V 282 V 282 9.196 3 0.083 0.083 10.509 0.000 0.000 - LGA Y 283 Y 283 6.696 8 0.056 0.056 7.478 0.000 0.000 - LGA I 284 I 284 3.818 4 0.029 0.029 4.687 12.273 6.136 - LGA N 285 N 285 1.951 4 0.561 0.561 2.461 48.182 24.091 - LGA A 286 A 286 2.373 1 0.225 0.225 2.712 35.455 28.364 - LGA V 287 V 287 3.121 3 0.614 0.614 6.208 14.091 8.052 - LGA D 288 D 288 3.346 4 0.514 0.514 3.346 27.727 13.864 - LGA K 289 K 289 3.011 5 0.504 0.504 3.661 16.818 7.475 - LGA T 290 T 290 1.560 3 0.369 0.369 2.697 45.000 25.714 - LGA D 291 D 291 2.601 4 0.646 0.646 3.989 26.818 13.409 - LGA L 292 L 292 3.786 4 0.638 0.638 5.388 10.000 5.000 - LGA T 293 T 293 2.062 3 0.500 0.500 2.439 38.182 21.818 - LGA G 294 G 294 3.608 0 0.168 0.168 3.608 21.818 21.818 - LGA I 295 I 295 5.206 4 0.674 0.674 5.471 1.818 0.909 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 97 388 388 100.00 736 388 52.72 97 0 SUMMARY(RMSD_GDC): 6.009 5.962 5.962 16.664 9.077 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 101 97 4.0 41 2.65 41.237 34.102 1.493 LGA_LOCAL RMSD: 2.646 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.329 Number of assigned atoms: 97 Std_ASGN_ATOMS RMSD: 6.009 Standard rmsd on all 97 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.525221 * X + -0.784905 * Y + 0.328735 * Z + -18.499798 Y_new = -0.499941 * X + -0.027998 * Y + -0.865607 * Z + 25.792170 Z_new = 0.688623 * X + -0.618984 * Y + -0.377701 * Z + 98.447144 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.380849 -0.759588 -2.118679 [DEG: -136.4126 -43.5212 -121.3914 ] ZXZ: 0.362950 1.958109 2.302988 [DEG: 20.7955 112.1914 131.9515 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1021s3TS116_4-D2 REMARK 2: T1021s3-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1021s3TS116_4-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 101 97 4.0 41 2.65 34.102 6.01 REMARK ---------------------------------------------------------- MOLECULE T1021s3TS116_4-D2 PFRMAT TS TARGET T1021s3 MODEL 4 PARENT 3fz2J 3eo7A 3rhwA 2q85A 2gjvA ATOM 777 N LEU 195 -51.092 11.924 74.953 1.00 1.00 ATOM 778 CA LEU 195 -50.646 12.584 76.142 1.00 1.00 ATOM 779 C LEU 195 -50.055 13.958 76.023 1.00 1.00 ATOM 780 O LEU 195 -50.232 14.619 75.001 1.00 1.00 ATOM 781 N SER 196 -49.352 14.304 77.136 1.00 1.00 ATOM 782 CA SER 196 -48.766 15.544 77.624 1.00 1.00 ATOM 783 C SER 196 -47.821 16.302 76.710 1.00 1.00 ATOM 784 O SER 196 -46.916 15.707 76.128 1.00 1.00 ATOM 785 N PRO 197 -48.104 17.609 76.653 1.00 1.00 ATOM 786 CA PRO 197 -47.336 18.570 75.864 1.00 1.00 ATOM 787 C PRO 197 -46.152 19.321 76.414 1.00 1.00 ATOM 788 O PRO 197 -46.164 19.727 77.573 1.00 1.00 ATOM 789 N LEU 198 -45.117 19.516 75.564 1.00 1.00 ATOM 790 CA LEU 198 -43.994 20.382 75.809 1.00 1.00 ATOM 791 C LEU 198 -44.403 21.807 75.529 1.00 1.00 ATOM 792 O LEU 198 -43.999 22.717 76.248 1.00 1.00 ATOM 793 N VAL 199 -45.223 22.001 74.472 1.00 1.00 ATOM 794 CA VAL 199 -45.604 23.281 73.921 1.00 1.00 ATOM 795 C VAL 199 -46.326 24.092 74.944 1.00 1.00 ATOM 796 O VAL 199 -46.217 25.316 74.947 1.00 1.00 ATOM 797 N ILE 200 -47.062 23.408 75.823 1.00 1.00 ATOM 798 CA ILE 200 -47.844 24.022 76.846 1.00 1.00 ATOM 799 C ILE 200 -46.937 24.863 77.683 1.00 1.00 ATOM 800 O ILE 200 -47.322 25.950 78.108 1.00 1.00 ATOM 801 N THR 201 -45.709 24.374 77.928 1.00 1.00 ATOM 802 CA THR 201 -44.792 25.060 78.785 1.00 1.00 ATOM 803 C THR 201 -44.501 26.417 78.245 1.00 1.00 ATOM 804 O THR 201 -44.540 27.397 78.986 1.00 1.00 ATOM 805 N ASP 202 -44.209 26.518 76.938 1.00 1.00 ATOM 806 CA ASP 202 -43.842 27.798 76.400 1.00 1.00 ATOM 807 C ASP 202 -45.003 28.727 76.521 1.00 1.00 ATOM 808 O ASP 202 -44.823 29.900 76.839 1.00 1.00 ATOM 809 N ALA 203 -46.216 28.209 76.274 1.00 1.00 ATOM 810 CA ALA 203 -47.382 29.039 76.297 1.00 1.00 ATOM 811 C ALA 203 -47.501 29.624 77.666 1.00 1.00 ATOM 812 O ALA 203 -47.891 30.780 77.811 1.00 1.00 ATOM 813 N LEU 204 -47.155 28.820 78.684 1.00 1.00 ATOM 814 CA LEU 204 -47.261 29.183 80.065 1.00 1.00 ATOM 815 C LEU 204 -46.420 30.407 80.293 1.00 1.00 ATOM 816 O LEU 204 -46.895 31.382 80.871 1.00 1.00 ATOM 817 N ARG 205 -45.156 30.371 79.830 1.00 1.00 ATOM 818 CA ARG 205 -44.245 31.456 80.068 1.00 1.00 ATOM 819 C ARG 205 -44.693 32.679 79.334 1.00 1.00 ATOM 820 O ARG 205 -44.619 33.781 79.872 1.00 1.00 ATOM 821 N GLU 206 -45.174 32.510 78.091 1.00 1.00 ATOM 822 CA GLU 206 -45.595 33.636 77.310 1.00 1.00 ATOM 823 C GLU 206 -46.754 34.280 77.996 1.00 1.00 ATOM 824 O GLU 206 -46.859 35.504 78.008 1.00 1.00 ATOM 825 N GLN 207 -47.637 33.457 78.583 1.00 1.00 ATOM 826 CA GLN 207 -48.828 33.927 79.224 1.00 1.00 ATOM 827 C GLN 207 -48.467 34.812 80.373 1.00 1.00 ATOM 828 O GLN 207 -49.124 35.824 80.602 1.00 1.00 ATOM 829 N LEU 208 -47.408 34.457 81.123 1.00 1.00 ATOM 830 CA LEU 208 -47.055 35.236 82.275 1.00 1.00 ATOM 831 C LEU 208 -46.759 36.622 81.790 1.00 1.00 ATOM 832 O LEU 208 -47.175 37.595 82.415 1.00 1.00 ATOM 833 N ARG 209 -46.040 36.731 80.660 1.00 1.00 ATOM 834 CA ARG 209 -45.640 37.996 80.110 1.00 1.00 ATOM 835 C ARG 209 -46.856 38.769 79.678 1.00 1.00 ATOM 836 O ARG 209 -46.904 39.985 79.845 1.00 1.00 ATOM 837 N VAL 210 -47.853 38.055 79.122 1.00 1.00 ATOM 838 CA VAL 210 -49.080 38.560 78.562 1.00 1.00 ATOM 839 C VAL 210 -50.004 39.102 79.619 1.00 1.00 ATOM 840 O VAL 210 -50.881 39.908 79.316 1.00 1.00 ATOM 841 N ALA 211 -49.837 38.685 80.889 1.00 1.00 ATOM 842 CA ALA 211 -50.777 38.988 81.935 1.00 1.00 ATOM 843 C ALA 211 -51.020 40.463 82.045 1.00 1.00 ATOM 844 O ALA 211 -52.146 40.885 82.302 1.00 1.00 ATOM 845 N LEU 212 -49.985 41.298 81.851 1.00 1.00 ATOM 846 CA LEU 212 -50.152 42.715 82.007 1.00 1.00 ATOM 847 C LEU 212 -51.229 43.155 81.068 1.00 1.00 ATOM 848 O LEU 212 -52.076 43.966 81.436 1.00 1.00 ATOM 849 N GLY 213 -51.231 42.629 79.830 1.00 1.00 ATOM 850 CA GLY 213 -52.234 43.032 78.892 1.00 1.00 ATOM 851 C GLY 213 -53.586 42.615 79.386 1.00 1.00 ATOM 852 O GLY 213 -54.534 43.396 79.325 1.00 1.00 ATOM 853 N GLY 214 -53.705 41.373 79.895 1.00 1.00 ATOM 854 CA GLY 214 -54.979 40.881 80.338 1.00 1.00 ATOM 855 C GLY 214 -55.457 41.669 81.518 1.00 1.00 ATOM 856 O GLY 214 -56.618 42.068 81.563 1.00 1.00 ATOM 857 N ASP 215 -54.564 41.916 82.495 1.00 1.00 ATOM 858 CA ASP 215 -54.961 42.635 83.668 1.00 1.00 ATOM 859 C ASP 215 -54.932 44.090 83.342 1.00 1.00 ATOM 860 O ASP 215 -54.381 44.479 82.315 1.00 1.00 ATOM 861 N TYR 216 -55.524 44.915 84.225 1.00 1.00 ATOM 862 CA TYR 216 -55.532 46.330 84.009 1.00 1.00 ATOM 863 C TYR 216 -54.589 46.928 84.998 1.00 1.00 ATOM 864 O TYR 216 -54.578 46.526 86.160 1.00 1.00 ATOM 865 N ASP 217 -53.797 47.907 84.524 1.00 1.00 ATOM 866 CA ASP 217 -52.842 48.635 85.304 1.00 1.00 ATOM 867 C ASP 217 -51.958 47.700 86.055 1.00 1.00 ATOM 868 O ASP 217 -51.636 47.953 87.213 1.00 1.00 ATOM 869 N ALA 218 -51.546 46.602 85.399 1.00 1.00 ATOM 870 CA ALA 218 -50.588 45.730 86.006 1.00 1.00 ATOM 871 C ALA 218 -49.415 45.767 85.083 1.00 1.00 ATOM 872 O ALA 218 -49.570 45.569 83.880 1.00 1.00 ATOM 873 N CYS 219 -48.197 46.016 85.611 1.00 1.00 ATOM 874 CA CYS 219 -47.068 46.001 84.725 1.00 1.00 ATOM 875 C CYS 219 -45.828 46.003 85.556 1.00 1.00 ATOM 876 O CYS 219 -45.583 46.954 86.294 1.00 1.00 ATOM 877 N LEU 220 -45.021 44.932 85.439 1.00 1.00 ATOM 878 CA LEU 220 -43.808 44.861 86.194 1.00 1.00 ATOM 879 C LEU 220 -42.875 43.991 85.425 1.00 1.00 ATOM 880 O LEU 220 -43.312 43.051 84.766 1.00 1.00 ATOM 881 N ALA 221 -41.562 44.276 85.494 1.00 1.00 ATOM 882 CA ALA 221 -40.659 43.413 84.796 1.00 1.00 ATOM 883 C ALA 221 -40.629 42.139 85.569 1.00 1.00 ATOM 884 O ALA 221 -40.571 42.164 86.796 1.00 1.00 ATOM 885 N MET 222 -40.662 40.991 84.868 1.00 1.00 ATOM 886 CA MET 222 -40.621 39.769 85.606 1.00 1.00 ATOM 887 C MET 222 -39.201 39.327 85.633 1.00 1.00 ATOM 888 O MET 222 -38.573 39.203 84.583 1.00 1.00 ATOM 889 N THR 223 -38.682 39.078 86.846 1.00 1.00 ATOM 890 CA THR 223 -37.335 38.622 86.983 1.00 1.00 ATOM 891 C THR 223 -37.219 37.220 86.474 1.00 1.00 ATOM 892 O THR 223 -36.266 36.899 85.768 1.00 1.00 ATOM 893 N HIS 224 -38.183 36.332 86.804 1.00 1.00 ATOM 894 CA HIS 224 -37.987 34.984 86.358 1.00 1.00 ATOM 895 C HIS 224 -39.313 34.305 86.212 1.00 1.00 ATOM 896 O HIS 224 -40.272 34.676 86.885 1.00 1.00 ATOM 897 N VAL 225 -39.370 33.291 85.329 1.00 1.00 ATOM 898 CA VAL 225 -40.582 32.549 85.145 1.00 1.00 ATOM 899 C VAL 225 -40.191 31.108 85.071 1.00 1.00 ATOM 900 O VAL 225 -39.270 30.755 84.338 1.00 1.00 ATOM 901 N ASN 226 -40.889 30.238 85.830 1.00 1.00 ATOM 902 CA ASN 226 -40.588 28.833 85.801 1.00 1.00 ATOM 903 C ASN 226 -41.834 28.135 85.370 1.00 1.00 ATOM 904 O ASN 226 -42.863 28.244 86.035 1.00 1.00 ATOM 905 N LEU 227 -41.769 27.393 84.246 1.00 1.00 ATOM 906 CA LEU 227 -42.931 26.735 83.722 1.00 1.00 ATOM 907 C LEU 227 -42.715 25.277 83.953 1.00 1.00 ATOM 908 O LEU 227 -41.657 24.750 83.620 1.00 1.00 ATOM 909 N ASP 228 -43.711 24.574 84.525 1.00 1.00 ATOM 910 CA ASP 228 -43.503 23.177 84.749 1.00 1.00 ATOM 911 C ASP 228 -44.615 22.417 84.103 1.00 1.00 ATOM 912 O ASP 228 -45.772 22.572 84.487 1.00 1.00 ATOM 913 N SER 229 -44.262 21.577 83.107 1.00 1.00 ATOM 914 CA SER 229 -45.194 20.667 82.509 1.00 1.00 ATOM 915 C SER 229 -44.761 19.328 82.974 1.00 1.00 ATOM 916 O SER 229 -43.705 18.846 82.567 1.00 1.00 ATOM 917 N SER 230 -45.555 18.675 83.834 1.00 1.00 ATOM 918 CA SER 230 -45.074 17.408 84.280 1.00 1.00 ATOM 919 C SER 230 -46.211 16.449 84.274 1.00 1.00 ATOM 920 O SER 230 -47.312 16.795 84.695 1.00 1.00 ATOM 921 N PRO 231 -45.926 15.269 83.808 1.00 1.00 ATOM 922 CA PRO 231 -46.947 14.268 83.805 1.00 1.00 ATOM 923 C PRO 231 -47.034 13.603 85.134 1.00 1.00 ATOM 924 O PRO 231 -46.021 13.445 85.812 1.00 1.00 ATOM 925 N VAL 232 -48.248 13.192 85.535 1.00 1.00 ATOM 926 CA VAL 232 -48.382 12.431 86.737 1.00 1.00 ATOM 927 C VAL 232 -48.722 11.066 86.248 1.00 1.00 ATOM 928 O VAL 232 -49.827 10.846 85.758 1.00 1.00 ATOM 929 N ALA 233 -47.775 10.126 86.381 1.00 1.00 ATOM 930 CA ALA 233 -48.005 8.826 85.836 1.00 1.00 ATOM 931 C ALA 233 -49.166 8.193 86.523 1.00 1.00 ATOM 932 O ALA 233 -50.044 7.639 85.865 1.00 1.00 ATOM 933 N ASN 234 -49.199 8.265 87.865 1.00 1.00 ATOM 934 CA ASN 234 -50.236 7.580 88.574 1.00 1.00 ATOM 935 C ASN 234 -51.556 8.157 88.197 1.00 1.00 ATOM 936 O ASN 234 -52.498 7.415 87.928 1.00 1.00 ATOM 937 N SER 235 -51.657 9.495 88.161 1.00 1.00 ATOM 938 CA SER 235 -52.940 10.060 87.874 1.00 1.00 ATOM 939 C SER 235 -53.245 9.894 86.424 1.00 1.00 ATOM 940 O SER 235 -52.370 10.089 85.584 1.00 1.00 ATOM 941 N ASP 236 -54.508 9.532 86.141 1.00 1.00 ATOM 942 CA ASP 236 -55.022 9.433 84.808 1.00 1.00 ATOM 943 C ASP 236 -56.060 10.507 84.702 1.00 1.00 ATOM 944 O ASP 236 -56.023 11.476 85.458 1.00 1.00 ATOM 945 N GLY 237 -57.025 10.374 83.770 1.00 1.00 ATOM 946 CA GLY 237 -58.014 11.409 83.674 1.00 1.00 ATOM 947 C GLY 237 -58.585 11.395 82.293 1.00 1.00 ATOM 948 O GLY 237 -58.749 10.329 81.705 1.00 1.00 ATOM 949 N SER 238 -58.887 12.595 81.761 1.00 1.00 ATOM 950 CA SER 238 -59.381 12.756 80.425 1.00 1.00 ATOM 951 C SER 238 -58.321 12.424 79.394 1.00 1.00 ATOM 952 O SER 238 -58.223 11.280 78.958 1.00 1.00 ATOM 953 N ALA 239 -57.497 13.428 78.989 1.00 1.00 ATOM 954 CA ALA 239 -56.434 13.253 78.028 1.00 1.00 ATOM 955 C ALA 239 -55.204 14.036 78.446 1.00 1.00 ATOM 956 O ALA 239 -55.312 15.203 78.811 1.00 1.00 ATOM 957 N ALA 240 -54.017 13.386 78.386 1.00 1.00 ATOM 958 CA ALA 240 -52.735 13.941 78.763 1.00 1.00 ATOM 959 C ALA 240 -52.744 14.272 80.226 1.00 1.00 ATOM 960 O ALA 240 -53.643 14.965 80.696 1.00 1.00 ATOM 961 N GLU 241 -51.729 13.781 80.985 1.00 1.00 ATOM 962 CA GLU 241 -51.701 13.994 82.409 1.00 1.00 ATOM 963 C GLU 241 -50.750 15.090 82.635 1.00 1.00 ATOM 964 O GLU 241 -49.542 14.884 82.553 1.00 1.00 ATOM 965 N ILE 242 -51.266 16.285 82.932 1.00 1.00 ATOM 966 CA ILE 242 -50.288 17.295 83.112 1.00 1.00 ATOM 967 C ILE 242 -50.599 18.053 84.344 1.00 1.00 ATOM 968 O ILE 242 -51.736 18.478 84.535 1.00 1.00 ATOM 969 N ARG 243 -49.574 18.229 85.186 1.00 1.00 ATOM 970 CA ARG 243 -49.754 19.090 86.303 1.00 1.00 ATOM 971 C ARG 243 -48.907 20.263 85.966 1.00 1.00 ATOM 972 O ARG 243 -47.708 20.115 85.743 1.00 1.00 ATOM 973 N VAL 244 -49.502 21.465 85.927 1.00 1.00 ATOM 974 CA VAL 244 -48.642 22.554 85.612 1.00 1.00 ATOM 975 C VAL 244 -48.506 23.387 86.822 1.00 1.00 ATOM 976 O VAL 244 -49.494 23.654 87.501 1.00 1.00 ATOM 977 N SER 245 -47.265 23.804 87.084 1.00 1.00 ATOM 978 CA SER 245 -47.039 24.692 88.165 1.00 1.00 ATOM 979 C SER 245 -46.177 25.749 87.587 1.00 1.00 ATOM 980 O SER 245 -45.259 25.448 86.825 1.00 1.00 ATOM 981 N LEU 246 -46.440 27.013 87.935 1.00 1.00 ATOM 982 CA LEU 246 -45.520 27.979 87.447 1.00 1.00 ATOM 983 C LEU 246 -45.161 28.810 88.626 1.00 1.00 ATOM 984 O LEU 246 -45.976 28.983 89.529 1.00 1.00 ATOM 985 N ARG 247 -43.934 29.342 88.629 1.00 1.00 ATOM 986 CA ARG 247 -43.588 30.232 89.682 1.00 1.00 ATOM 987 C ARG 247 -43.131 31.469 89.000 1.00 1.00 ATOM 988 O ARG 247 -42.318 31.403 88.080 1.00 1.00 ATOM 989 N VAL 248 -43.644 32.625 89.448 1.00 1.00 ATOM 990 CA VAL 248 -43.276 33.858 88.836 1.00 1.00 ATOM 991 C VAL 248 -42.535 34.608 89.880 1.00 1.00 ATOM 992 O VAL 248 -42.902 34.559 91.051 1.00 1.00 ATOM 993 N TYR 249 -41.476 35.323 89.463 1.00 1.00 ATOM 994 CA TYR 249 -40.680 36.056 90.397 1.00 1.00 ATOM 995 C TYR 249 -40.560 37.448 89.882 1.00 1.00 ATOM 996 O TYR 249 -40.734 37.680 88.687 1.00 1.00 ATOM 997 N GLY 250 -40.250 38.388 90.792 1.00 1.00 ATOM 998 CA GLY 250 -40.055 39.749 90.406 1.00 1.00 ATOM 999 C GLY 250 -39.719 40.495 91.651 1.00 1.00 ATOM 1000 O GLY 250 -39.953 39.997 92.750 1.00 1.00 ATOM 1001 N MET 251 -39.168 41.712 91.501 1.00 1.00 ATOM 1002 CA MET 251 -38.937 42.507 92.667 1.00 1.00 ATOM 1003 C MET 251 -39.692 43.766 92.422 1.00 1.00 ATOM 1004 O MET 251 -39.269 44.589 91.612 1.00 1.00 ATOM 1005 N THR 252 -40.822 43.935 93.127 1.00 1.00 ATOM 1006 CA THR 252 -41.650 45.076 92.888 1.00 1.00 ATOM 1007 C THR 252 -42.521 45.266 94.092 1.00 1.00 ATOM 1008 O THR 252 -42.532 44.421 94.984 1.00 1.00 ATOM 1009 N PRO 253 -43.241 46.357 94.107 1.00 1.00 ATOM 1010 CA PRO 253 -44.158 46.595 95.190 1.00 1.00 ATOM 1011 C PRO 253 -45.383 45.725 95.195 1.00 1.00 ATOM 1012 O PRO 253 -46.071 45.634 96.209 1.00 1.00 ATOM 1013 N THR 254 -45.720 45.038 94.083 1.00 1.00 ATOM 1014 CA THR 254 -46.922 44.243 94.085 1.00 1.00 ATOM 1015 C THR 254 -46.571 42.817 93.769 1.00 1.00 ATOM 1016 O THR 254 -45.498 42.550 93.234 1.00 1.00 ATOM 1017 N GLU 255 -47.485 41.877 94.096 1.00 1.00 ATOM 1018 CA GLU 255 -47.233 40.467 93.930 1.00 1.00 ATOM 1019 C GLU 255 -47.557 40.025 92.532 1.00 1.00 ATOM 1020 O GLU 255 -48.244 40.737 91.804 1.00 1.00 ATOM 1021 N TYR 256 -47.064 38.822 92.141 1.00 1.00 ATOM 1022 CA TYR 256 -47.341 38.316 90.828 1.00 1.00 ATOM 1023 C TYR 256 -48.265 37.138 90.929 1.00 1.00 ATOM 1024 O TYR 256 -48.009 36.099 90.322 1.00 1.00 ATOM 1025 N LEU 257 -49.367 37.262 91.689 1.00 1.00 ATOM 1026 CA LEU 257 -50.289 36.168 91.792 1.00 1.00 ATOM 1027 C LEU 257 -50.881 35.981 90.434 1.00 1.00 ATOM 1028 O LEU 257 -51.043 34.850 89.982 1.00 1.00 ATOM 1029 N ALA 258 -51.200 37.115 89.780 1.00 1.00 ATOM 1030 CA ALA 258 -51.866 37.108 88.514 1.00 1.00 ATOM 1031 C ALA 258 -51.011 36.467 87.472 1.00 1.00 ATOM 1032 O ALA 258 -51.505 35.677 86.672 1.00 1.00 ATOM 1033 N PRO 259 -49.743 36.758 87.438 1.00 1.00 ATOM 1034 CA PRO 259 -48.951 36.153 86.410 1.00 1.00 ATOM 1035 C PRO 259 -48.913 34.681 86.587 1.00 1.00 ATOM 1036 O PRO 259 -48.892 33.942 85.605 1.00 1.00 ATOM 1037 N MET 260 -48.912 34.228 87.848 1.00 1.00 ATOM 1038 CA MET 260 -48.885 32.829 88.095 1.00 1.00 ATOM 1039 C MET 260 -50.158 32.171 87.667 1.00 1.00 ATOM 1040 O MET 260 -50.126 31.105 87.056 1.00 1.00 ATOM 1041 N ASN 261 -51.307 32.803 87.975 1.00 1.00 ATOM 1042 CA ASN 261 -52.589 32.224 87.676 1.00 1.00 ATOM 1043 C ASN 261 -52.692 32.059 86.205 1.00 1.00 ATOM 1044 O ASN 261 -53.055 30.987 85.728 1.00 1.00 ATOM 1045 N THR 262 -52.357 33.146 85.491 1.00 1.00 ATOM 1046 CA THR 262 -52.544 33.219 84.078 1.00 1.00 ATOM 1047 C THR 262 -51.690 32.210 83.391 1.00 1.00 ATOM 1048 O THR 262 -52.138 31.566 82.446 1.00 1.00 ATOM 1049 N VAL 263 -50.440 32.040 83.850 1.00 1.00 ATOM 1050 CA VAL 263 -49.590 31.151 83.130 1.00 1.00 ATOM 1051 C VAL 263 -50.165 29.776 83.140 1.00 1.00 ATOM 1052 O VAL 263 -50.266 29.143 82.092 1.00 1.00 ATOM 1053 N PHE 264 -50.568 29.264 84.319 1.00 1.00 ATOM 1054 CA PHE 264 -51.013 27.906 84.357 1.00 1.00 ATOM 1055 C PHE 264 -52.308 27.752 83.615 1.00 1.00 ATOM 1056 O PHE 264 -52.533 26.727 82.975 1.00 1.00 ATOM 1057 N ASN 265 -53.200 28.760 83.665 1.00 1.00 ATOM 1058 CA ASN 265 -54.448 28.663 82.953 1.00 1.00 ATOM 1059 C ASN 265 -54.219 28.612 81.463 1.00 1.00 ATOM 1060 O ASN 265 -54.829 27.799 80.773 1.00 1.00 ATOM 1061 N GLU 266 -53.334 29.465 80.910 1.00 1.00 ATOM 1062 CA GLU 266 -53.111 29.473 79.483 1.00 1.00 ATOM 1063 C GLU 266 -52.460 28.187 79.099 1.00 1.00 ATOM 1064 O GLU 266 -52.718 27.666 78.016 1.00 1.00 ATOM 1065 N TRP 267 -51.623 27.691 80.011 1.00 1.00 ATOM 1066 CA TRP 267 -50.919 26.457 79.914 1.00 1.00 ATOM 1067 C TRP 267 -51.929 25.383 79.670 1.00 1.00 ATOM 1068 O TRP 267 -51.824 24.649 78.690 1.00 1.00 ATOM 1069 N GLU 268 -52.920 25.295 80.567 1.00 1.00 ATOM 1070 CA GLU 268 -53.861 24.220 80.512 1.00 1.00 ATOM 1071 C GLU 268 -54.613 24.281 79.220 1.00 1.00 ATOM 1072 O GLU 268 -54.817 23.255 78.575 1.00 1.00 ATOM 1073 N LYS 269 -55.038 25.490 78.807 1.00 1.00 ATOM 1074 CA LYS 269 -55.816 25.609 77.613 1.00 1.00 ATOM 1075 C LYS 269 -54.988 25.202 76.440 1.00 1.00 ATOM 1076 O LYS 269 -55.489 24.546 75.530 1.00 1.00 ATOM 1077 N SER 270 -53.697 25.577 76.441 1.00 1.00 ATOM 1078 CA SER 270 -52.861 25.236 75.330 1.00 1.00 ATOM 1079 C SER 270 -52.773 23.754 75.274 1.00 1.00 ATOM 1080 O SER 270 -52.726 23.179 74.188 1.00 1.00 ATOM 1081 N GLU 271 -52.754 23.110 76.451 1.00 1.00 ATOM 1082 CA GLU 271 -52.666 21.691 76.463 1.00 1.00 ATOM 1083 C GLU 271 -53.875 21.154 75.771 1.00 1.00 ATOM 1084 O GLU 271 -53.756 20.285 74.911 1.00 1.00 ATOM 1085 N ALA 272 -55.070 21.655 76.117 1.00 1.00 ATOM 1086 CA ALA 272 -56.242 21.057 75.551 1.00 1.00 ATOM 1087 C ALA 272 -56.255 21.221 74.066 1.00 1.00 ATOM 1088 O ALA 272 -56.517 20.263 73.342 1.00 1.00 ATOM 1089 N ALA 273 -55.965 22.442 73.581 1.00 1.00 ATOM 1090 CA ALA 273 -56.083 22.710 72.178 1.00 1.00 ATOM 1091 C ALA 273 -55.125 21.869 71.404 1.00 1.00 ATOM 1092 O ALA 273 -55.501 21.277 70.394 1.00 1.00 ATOM 1093 N ALA 274 -53.869 21.799 71.868 1.00 1.00 ATOM 1094 CA ALA 274 -52.863 21.080 71.150 1.00 1.00 ATOM 1095 C ALA 274 -53.162 19.610 71.121 1.00 1.00 ATOM 1096 O ALA 274 -53.010 18.970 70.082 1.00 1.00 ATOM 1097 N VAL 275 -53.600 19.073 72.277 1.00 1.00 ATOM 1098 CA VAL 275 -53.840 17.694 72.641 1.00 1.00 ATOM 1099 C VAL 275 -55.075 17.077 72.070 1.00 1.00 ATOM 1100 O VAL 275 -55.143 15.859 71.921 1.00 1.00 ATOM 1101 N THR 276 -56.097 17.875 71.719 1.00 1.00 ATOM 1102 CA THR 276 -57.389 17.343 71.387 1.00 1.00 ATOM 1103 C THR 276 -57.292 16.277 70.338 1.00 1.00 ATOM 1104 O THR 276 -58.000 15.275 70.411 1.00 1.00 ATOM 1105 N PRO 277 -56.462 16.391 69.345 1.00 1.00 ATOM 1106 CA PRO 277 -56.366 15.340 68.372 1.00 1.00 ATOM 1107 C PRO 277 -55.901 14.046 68.970 1.00 1.00 ATOM 1108 O PRO 277 -56.324 12.978 68.534 1.00 1.00 ATOM 1109 N ASP 278 -55.024 14.104 69.991 1.00 1.00 ATOM 1110 CA ASP 278 -54.521 12.952 70.684 1.00 1.00 ATOM 1111 C ASP 278 -55.655 12.339 71.436 1.00 1.00 ATOM 1112 O ASP 278 -55.833 11.124 71.399 1.00 1.00 ATOM 1113 N GLY 279 -56.450 13.181 72.128 1.00 1.00 ATOM 1114 CA GLY 279 -57.547 12.682 72.903 1.00 1.00 ATOM 1115 C GLY 279 -58.562 13.772 73.034 1.00 1.00 ATOM 1116 O GLY 279 -58.256 14.841 73.559 1.00 1.00 ATOM 1117 N TYR 280 -59.785 13.478 72.552 1.00 1.00 ATOM 1118 CA TYR 280 -60.896 14.377 72.551 1.00 1.00 ATOM 1119 C TYR 280 -61.363 14.669 73.936 1.00 1.00 ATOM 1120 O TYR 280 -61.664 15.817 74.256 1.00 1.00 ATOM 1121 N ARG 281 -61.436 13.651 74.810 1.00 1.00 ATOM 1122 CA ARG 281 -61.935 13.977 76.108 1.00 1.00 ATOM 1123 C ARG 281 -60.784 14.253 77.009 1.00 1.00 ATOM 1124 O ARG 281 -60.260 13.338 77.639 1.00 1.00 ATOM 1125 N VAL 282 -60.385 15.537 77.081 1.00 1.00 ATOM 1126 CA VAL 282 -59.346 15.987 77.957 1.00 1.00 ATOM 1127 C VAL 282 -60.018 16.989 78.843 1.00 1.00 ATOM 1128 O VAL 282 -60.827 17.785 78.370 1.00 1.00 ATOM 1129 N TYR 283 -59.713 17.004 80.157 1.00 1.00 ATOM 1130 CA TYR 283 -60.418 17.954 80.970 1.00 1.00 ATOM 1131 C TYR 283 -59.417 18.685 81.815 1.00 1.00 ATOM 1132 O TYR 283 -58.441 18.091 82.267 1.00 1.00 ATOM 1133 N ILE 284 -59.643 19.996 82.049 1.00 1.00 ATOM 1134 CA ILE 284 -58.694 20.744 82.828 1.00 1.00 ATOM 1135 C ILE 284 -59.305 21.009 84.162 1.00 1.00 ATOM 1136 O ILE 284 -60.428 21.505 84.238 1.00 1.00 ATOM 1137 N ASN 285 -58.564 20.683 85.237 1.00 1.00 ATOM 1138 CA ASN 285 -59.104 20.858 86.554 1.00 1.00 ATOM 1139 C ASN 285 -58.126 21.617 87.401 1.00 1.00 ATOM 1140 O ASN 285 -56.974 21.790 87.008 1.00 1.00 ATOM 1141 N ALA 286 -58.611 22.062 88.579 1.00 1.00 ATOM 1142 CA ALA 286 -57.888 22.710 89.646 1.00 1.00 ATOM 1143 C ALA 286 -56.974 23.838 89.249 1.00 1.00 ATOM 1144 O ALA 286 -55.756 23.709 89.348 1.00 1.00 ATOM 1145 N VAL 287 -57.537 24.979 88.794 1.00 1.00 ATOM 1146 CA VAL 287 -56.796 26.197 88.552 1.00 1.00 ATOM 1147 C VAL 287 -56.673 26.833 89.908 1.00 1.00 ATOM 1148 O VAL 287 -57.632 27.423 90.401 1.00 1.00 ATOM 1149 N ASP 288 -55.493 26.752 90.567 1.00 1.00 ATOM 1150 CA ASP 288 -55.463 27.259 91.914 1.00 1.00 ATOM 1151 C ASP 288 -54.158 27.917 92.235 1.00 1.00 ATOM 1152 O ASP 288 -53.166 27.687 91.547 1.00 1.00 ATOM 1153 N LYS 289 -54.181 28.737 93.306 1.00 1.00 ATOM 1154 CA LYS 289 -53.020 29.429 93.772 1.00 1.00 ATOM 1155 C LYS 289 -52.454 28.631 94.898 1.00 1.00 ATOM 1156 O LYS 289 -53.182 28.255 95.813 1.00 1.00 ATOM 1157 N THR 290 -51.137 28.365 94.856 1.00 1.00 ATOM 1158 CA THR 290 -50.533 27.649 95.936 1.00 1.00 ATOM 1159 C THR 290 -49.770 28.639 96.758 1.00 1.00 ATOM 1160 O THR 290 -50.370 29.430 97.483 1.00 1.00 ATOM 1161 N ASP 291 -48.429 28.629 96.667 1.00 1.00 ATOM 1162 CA ASP 291 -47.612 29.484 97.472 1.00 1.00 ATOM 1163 C ASP 291 -47.604 30.893 96.968 1.00 1.00 ATOM 1164 O ASP 291 -47.778 31.119 95.773 1.00 1.00 ATOM 1165 N LEU 292 -47.389 31.819 97.924 1.00 1.00 ATOM 1166 CA LEU 292 -47.278 33.226 97.698 1.00 1.00 ATOM 1167 C LEU 292 -46.324 33.731 98.730 1.00 1.00 ATOM 1168 O LEU 292 -46.427 33.361 99.898 1.00 1.00 ATOM 1169 N THR 293 -45.372 34.596 98.335 1.00 1.00 ATOM 1170 CA THR 293 -44.473 35.127 99.316 1.00 1.00 ATOM 1171 C THR 293 -44.303 36.576 99.014 1.00 1.00 ATOM 1172 O THR 293 -44.652 37.023 97.923 1.00 1.00 ATOM 1173 N GLY 294 -43.755 37.334 99.981 1.00 1.00 ATOM 1174 CA GLY 294 -43.574 38.735 99.765 1.00 1.00 ATOM 1175 C GLY 294 -44.825 39.397 100.232 1.00 1.00 ATOM 1176 O GLY 294 -45.805 38.719 100.533 1.00 1.00 ATOM 1177 N ILE 295 -44.797 40.746 100.290 1.00 1.00 ATOM 1178 CA ILE 295 -45.865 41.592 100.752 1.00 1.00 ATOM 1179 C ILE 295 -47.243 41.032 100.423 1.00 1.00 ATOM 1180 O ILE 295 -47.336 39.949 99.816 1.00 1.00 TER END