####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 101 ( 404), selected 97 , name T1021s3TS116_3-D2 # Molecule2: number of CA atoms 97 ( 736), selected 97 , name T1021s3-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1021s3TS116_3-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 224 - 251 4.92 16.03 LCS_AVERAGE: 25.48 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 253 - 270 1.95 14.84 LCS_AVERAGE: 12.18 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 200 - 212 0.54 15.79 LCS_AVERAGE: 7.84 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 97 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT L 195 L 195 4 4 21 3 3 4 13 15 18 19 20 21 22 23 25 28 31 34 35 39 42 44 47 LCS_GDT S 196 S 196 4 4 21 3 3 4 4 4 4 17 20 21 22 23 23 28 31 34 35 39 44 47 49 LCS_GDT P 197 P 197 4 4 21 3 3 10 14 15 18 19 20 21 22 23 25 28 31 34 35 39 44 47 49 LCS_GDT L 198 L 198 4 4 21 3 3 4 4 4 5 11 15 16 18 21 24 26 31 34 35 38 44 47 49 LCS_GDT V 199 V 199 3 14 21 3 3 3 6 8 13 15 17 17 18 21 25 28 31 34 36 39 44 47 49 LCS_GDT I 200 I 200 13 14 21 7 13 13 13 13 13 15 17 17 18 21 24 28 31 34 36 39 44 47 49 LCS_GDT T 201 T 201 13 14 21 8 13 13 13 13 14 15 17 17 18 21 24 26 31 34 35 39 44 47 49 LCS_GDT D 202 D 202 13 14 21 8 13 13 13 13 14 15 17 17 18 21 24 26 29 31 35 39 44 47 49 LCS_GDT A 203 A 203 13 14 21 8 13 13 13 13 14 15 17 17 18 21 24 26 31 34 36 39 44 47 49 LCS_GDT L 204 L 204 13 14 21 8 13 13 13 13 14 15 17 17 18 21 25 28 31 34 36 39 44 47 49 LCS_GDT R 205 R 205 13 14 21 8 13 13 13 13 14 15 17 18 20 24 27 28 31 34 36 39 44 47 49 LCS_GDT E 206 E 206 13 14 21 7 13 13 13 13 14 15 17 17 18 21 24 28 31 34 36 39 44 47 49 LCS_GDT Q 207 Q 207 13 14 21 8 13 13 13 13 14 15 17 17 18 21 25 28 31 34 36 39 44 47 49 LCS_GDT L 208 L 208 13 14 21 8 13 13 13 13 14 15 17 18 22 25 27 28 31 34 36 40 46 49 50 LCS_GDT R 209 R 209 13 14 21 8 13 13 13 13 14 15 17 17 22 25 26 28 31 34 36 39 44 47 49 LCS_GDT V 210 V 210 13 14 21 7 13 13 13 13 14 15 17 17 18 21 25 28 31 34 36 39 44 47 49 LCS_GDT A 211 A 211 13 14 21 7 13 13 13 13 14 15 17 17 18 21 25 28 31 34 36 39 44 47 49 LCS_GDT L 212 L 212 13 14 21 4 13 13 13 13 14 15 17 17 18 21 25 28 31 34 36 39 44 47 49 LCS_GDT D 217 D 217 3 14 21 3 3 3 3 8 14 15 17 17 18 22 25 28 31 34 36 39 42 45 47 LCS_GDT A 218 A 218 3 7 21 3 3 3 6 12 14 15 17 17 18 21 25 28 31 34 36 39 44 47 49 LCS_GDT C 219 C 219 4 7 21 3 4 4 6 7 10 11 14 17 21 22 24 27 29 34 36 39 42 47 49 LCS_GDT L 220 L 220 5 7 20 3 5 5 12 16 18 18 20 21 22 23 24 27 29 32 36 38 41 45 47 LCS_GDT A 221 A 221 5 7 20 3 5 5 6 14 18 19 20 21 22 23 24 27 29 30 35 37 42 47 49 LCS_GDT M 222 M 222 5 7 23 3 5 5 7 14 16 16 19 21 25 29 31 34 39 43 46 47 49 52 54 LCS_GDT T 223 T 223 5 7 23 3 5 5 6 8 14 15 18 21 26 29 32 37 39 43 46 47 49 52 54 LCS_GDT H 224 H 224 5 12 28 1 5 5 7 11 12 14 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT V 225 V 225 7 12 28 2 6 7 10 11 12 12 15 20 26 28 30 35 40 43 46 47 49 52 54 LCS_GDT N 226 N 226 7 12 28 3 6 7 10 11 12 15 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT L 227 L 227 7 12 28 3 6 7 10 11 12 14 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT D 228 D 228 8 12 28 4 8 8 10 11 14 16 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT S 229 S 229 8 12 28 4 8 8 10 11 14 16 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT S 230 S 230 8 12 28 4 8 8 10 11 14 16 20 22 26 28 33 37 40 43 46 47 49 52 54 LCS_GDT P 231 P 231 8 12 28 4 8 8 10 11 14 16 20 22 26 28 33 37 40 43 46 47 49 52 54 LCS_GDT V 232 V 232 8 12 28 4 8 8 10 11 14 16 20 22 26 28 33 37 40 43 46 47 49 52 54 LCS_GDT A 233 A 233 8 12 28 4 8 8 10 11 12 16 20 22 26 28 33 37 40 43 46 47 49 52 54 LCS_GDT N 234 N 234 8 12 28 3 8 8 10 11 14 15 20 22 26 28 33 37 40 43 46 47 49 52 54 LCS_GDT S 235 S 235 8 12 28 4 8 8 10 11 14 16 20 22 26 28 33 37 40 43 46 47 49 52 54 LCS_GDT D 236 D 236 4 9 28 4 5 7 8 10 14 16 20 22 26 28 33 37 40 43 46 47 49 52 54 LCS_GDT G 237 G 237 4 6 28 3 5 7 8 10 14 16 20 22 26 28 33 37 40 43 46 47 49 52 54 LCS_GDT S 238 S 238 4 6 28 4 5 7 8 10 14 16 20 22 26 28 33 37 40 43 46 47 49 52 54 LCS_GDT A 239 A 239 3 9 28 3 3 5 7 8 9 13 19 21 26 28 33 37 40 43 46 47 49 52 54 LCS_GDT A 240 A 240 6 10 28 3 5 6 9 9 11 12 13 14 21 26 30 34 38 41 45 47 49 52 54 LCS_GDT E 241 E 241 6 10 28 4 5 7 9 9 11 12 16 21 26 28 33 37 40 43 46 47 49 52 54 LCS_GDT I 242 I 242 6 10 28 4 6 7 9 9 11 12 16 21 26 28 33 37 40 43 46 47 49 52 54 LCS_GDT R 243 R 243 6 10 28 3 6 7 9 9 11 12 15 20 26 28 32 37 40 43 46 47 49 52 54 LCS_GDT V 244 V 244 6 10 28 4 8 9 12 14 14 15 17 20 23 27 31 35 40 43 46 47 49 52 54 LCS_GDT S 245 S 245 6 10 28 4 6 7 9 9 11 12 13 15 20 24 29 33 36 42 43 45 49 51 54 LCS_GDT L 246 L 246 6 10 28 3 6 7 9 9 11 12 13 15 22 25 30 33 36 42 43 46 49 52 54 LCS_GDT R 247 R 247 6 10 28 3 6 7 9 9 11 12 13 14 17 23 29 32 35 38 40 43 44 47 51 LCS_GDT V 248 V 248 6 10 28 3 5 6 7 8 9 10 13 14 19 25 29 32 35 38 40 43 44 47 51 LCS_GDT Y 249 Y 249 4 10 28 3 3 5 9 9 11 13 19 21 26 28 30 34 39 42 44 46 49 52 54 LCS_GDT G 250 G 250 4 6 28 3 3 5 8 10 14 16 20 22 26 28 33 37 40 43 46 47 49 52 54 LCS_GDT M 251 M 251 4 6 28 3 4 5 8 10 12 15 20 22 26 28 33 37 40 43 46 47 49 52 54 LCS_GDT T 252 T 252 4 6 27 3 4 5 6 7 9 14 18 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT P 253 P 253 8 18 27 3 7 11 14 16 18 19 20 22 26 29 31 34 38 42 44 47 49 51 54 LCS_GDT T 254 T 254 8 18 27 3 4 5 8 12 18 19 20 22 26 29 31 34 38 42 44 47 49 51 53 LCS_GDT E 255 E 255 12 18 27 3 7 11 14 16 18 19 20 22 26 29 31 34 38 43 46 47 49 52 54 LCS_GDT Y 256 Y 256 12 18 27 7 10 11 14 16 18 19 20 21 26 29 31 34 38 43 46 47 49 52 54 LCS_GDT L 257 L 257 12 18 27 7 10 11 14 16 18 19 20 22 26 29 31 34 39 43 46 47 49 52 54 LCS_GDT A 258 A 258 12 18 27 5 10 11 14 16 18 19 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT P 259 P 259 12 18 27 5 10 11 14 16 18 19 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT M 260 M 260 12 18 27 5 10 11 14 16 18 19 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT N 261 N 261 12 18 27 7 10 11 14 16 18 19 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT T 262 T 262 12 18 27 7 10 11 14 16 18 19 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT V 263 V 263 12 18 27 7 10 11 14 16 18 19 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT F 264 F 264 12 18 27 7 10 11 14 16 18 19 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT N 265 N 265 12 18 27 7 10 11 14 16 18 19 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT E 266 E 266 12 18 27 4 8 11 14 15 18 19 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT W 267 W 267 12 18 27 4 6 10 14 15 18 19 20 22 26 29 32 37 40 43 46 47 49 52 54 LCS_GDT E 268 E 268 5 18 27 3 4 10 13 16 18 19 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT K 269 K 269 4 18 27 3 8 10 14 16 18 18 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT S 270 S 270 4 18 27 3 8 10 14 16 18 18 20 22 26 29 33 37 40 43 46 47 49 52 54 LCS_GDT E 271 E 271 4 7 27 3 4 4 5 8 10 16 17 20 26 28 33 37 40 43 46 47 49 52 54 LCS_GDT A 272 A 272 4 7 26 3 4 4 5 10 14 14 17 20 26 28 32 37 40 43 46 47 49 52 54 LCS_GDT A 273 A 273 4 14 26 3 3 5 8 11 14 15 17 21 25 28 31 34 40 43 46 47 49 52 54 LCS_GDT A 274 A 274 9 14 26 3 6 11 13 14 14 15 18 21 25 29 31 35 40 43 46 47 49 52 54 LCS_GDT V 275 V 275 9 14 26 3 6 11 13 14 14 15 17 20 23 27 30 33 37 42 44 46 49 52 54 LCS_GDT T 276 T 276 9 14 26 3 8 11 13 14 14 15 17 20 22 25 27 28 31 33 36 41 42 46 47 LCS_GDT P 277 P 277 9 14 26 3 8 11 13 14 14 15 17 20 22 25 27 28 31 33 36 38 41 45 45 LCS_GDT D 278 D 278 9 14 26 3 8 11 13 14 14 15 16 20 22 25 27 28 31 33 36 38 41 45 45 LCS_GDT G 279 G 279 9 14 26 4 8 11 13 14 14 15 16 20 22 25 27 28 31 33 36 38 41 45 45 LCS_GDT Y 280 Y 280 9 14 26 4 8 11 13 14 14 15 16 19 22 25 27 28 31 33 35 38 38 41 44 LCS_GDT R 281 R 281 9 14 26 4 8 11 13 14 14 15 17 20 22 25 27 28 31 33 36 38 41 45 45 LCS_GDT V 282 V 282 9 14 26 4 8 11 13 14 14 15 17 20 22 25 27 28 31 34 36 41 45 50 54 LCS_GDT Y 283 Y 283 9 14 26 4 7 11 13 14 14 15 17 20 22 25 27 32 36 42 43 46 49 52 54 LCS_GDT I 284 I 284 9 14 26 3 7 11 13 14 14 15 17 20 26 28 32 37 40 43 46 47 49 52 54 LCS_GDT N 285 N 285 9 14 26 4 7 11 13 14 14 14 18 21 26 29 31 33 38 42 43 46 49 52 54 LCS_GDT A 286 A 286 9 14 26 4 7 11 13 14 14 16 20 22 26 29 31 34 38 42 43 46 49 51 54 LCS_GDT V 287 V 287 3 14 26 3 3 4 8 12 13 15 16 18 22 25 27 28 32 33 37 41 44 45 46 LCS_GDT D 288 D 288 3 4 26 3 3 4 11 11 13 15 16 18 22 25 27 28 31 33 36 38 42 45 45 LCS_GDT K 289 K 289 3 4 21 3 3 3 4 5 10 11 13 15 15 19 23 26 29 32 36 38 41 45 45 LCS_GDT T 290 T 290 3 5 19 3 3 3 4 5 5 7 10 14 17 17 21 25 29 32 36 38 41 45 45 LCS_GDT D 291 D 291 4 5 16 3 4 4 5 6 7 8 10 13 14 16 18 23 24 32 36 38 41 45 45 LCS_GDT L 292 L 292 4 5 15 3 4 4 5 6 7 8 10 14 17 17 18 20 22 23 28 30 36 41 44 LCS_GDT T 293 T 293 4 5 11 3 4 4 5 6 7 8 10 14 17 17 18 21 23 23 25 27 30 31 34 LCS_GDT G 294 G 294 4 5 11 3 4 4 5 6 7 8 10 14 17 17 18 20 22 23 25 27 29 30 32 LCS_GDT I 295 I 295 3 5 11 3 3 4 5 6 6 8 10 13 14 16 17 20 22 23 24 26 27 29 30 LCS_AVERAGE LCS_A: 15.17 ( 7.84 12.18 25.48 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 13 13 14 16 18 19 20 22 26 29 33 37 40 43 46 47 49 52 54 GDT PERCENT_AT 8.25 13.40 13.40 14.43 16.49 18.56 19.59 20.62 22.68 26.80 29.90 34.02 38.14 41.24 44.33 47.42 48.45 50.52 53.61 55.67 GDT RMS_LOCAL 0.36 0.54 0.54 1.22 1.59 1.77 1.92 2.06 3.09 3.52 3.85 4.40 4.68 4.96 5.30 5.50 5.57 5.80 6.13 6.32 GDT RMS_ALL_AT 15.86 15.79 15.79 16.04 15.25 15.29 15.90 15.98 14.60 14.97 14.68 14.42 14.46 14.49 14.18 14.19 14.20 14.14 14.33 14.37 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA L 195 L 195 2.139 4 0.456 0.456 2.139 59.091 29.545 - LGA S 196 S 196 3.567 2 0.057 0.057 3.567 23.636 15.758 - LGA P 197 P 197 1.430 3 0.698 0.698 3.216 35.000 20.000 - LGA L 198 L 198 7.330 4 0.648 0.648 8.355 0.000 0.000 - LGA V 199 V 199 10.139 3 0.662 0.662 10.573 0.000 0.000 - LGA I 200 I 200 10.565 4 0.584 0.584 10.565 0.000 0.000 - LGA T 201 T 201 11.160 3 0.050 0.050 12.549 0.000 0.000 - LGA D 202 D 202 15.911 4 0.207 0.207 16.696 0.000 0.000 - LGA A 203 A 203 14.352 1 0.057 0.057 14.374 0.000 0.000 - LGA L 204 L 204 9.281 4 0.189 0.189 10.926 0.000 0.000 - LGA R 205 R 205 12.362 7 0.064 0.064 13.452 0.000 0.000 - LGA E 206 E 206 16.249 5 0.257 0.257 17.112 0.000 0.000 - LGA Q 207 Q 207 13.617 5 0.043 0.043 13.826 0.000 0.000 - LGA L 208 L 208 10.241 4 0.047 0.047 11.661 0.000 0.000 - LGA R 209 R 209 14.528 7 0.069 0.069 16.147 0.000 0.000 - LGA V 210 V 210 17.971 3 0.143 0.143 18.592 0.000 0.000 - LGA A 211 A 211 14.465 1 0.167 0.167 14.962 0.000 0.000 - LGA L 212 L 212 12.908 4 0.120 0.120 16.228 0.000 0.000 - LGA D 217 D 217 18.170 4 0.373 0.373 20.576 0.000 0.000 - LGA A 218 A 218 15.069 1 0.663 0.663 16.645 0.000 0.000 - LGA C 219 C 219 11.512 2 0.633 0.633 12.869 0.000 0.000 - LGA L 220 L 220 6.492 4 0.043 0.043 8.399 1.818 0.909 - LGA A 221 A 221 3.112 1 0.107 0.107 4.542 9.091 7.273 - LGA M 222 M 222 7.297 4 0.354 0.354 10.828 0.000 0.000 - LGA T 223 T 223 11.301 3 0.584 0.584 12.484 0.000 0.000 - LGA H 224 H 224 15.376 6 0.687 0.687 16.510 0.000 0.000 - LGA V 225 V 225 18.004 3 0.553 0.553 18.004 0.000 0.000 - LGA N 226 N 226 17.560 4 0.577 0.577 17.839 0.000 0.000 - LGA L 227 L 227 16.217 4 0.349 0.349 16.587 0.000 0.000 - LGA D 228 D 228 16.840 4 0.082 0.082 17.647 0.000 0.000 - LGA S 229 S 229 16.140 2 0.103 0.103 16.140 0.000 0.000 - LGA S 230 S 230 16.195 2 0.016 0.016 17.184 0.000 0.000 - LGA P 231 P 231 16.483 3 0.160 0.160 16.831 0.000 0.000 - LGA V 232 V 232 17.989 3 0.073 0.073 18.305 0.000 0.000 - LGA A 233 A 233 18.551 1 0.670 0.670 21.631 0.000 0.000 - LGA N 234 N 234 22.975 4 0.514 0.514 24.969 0.000 0.000 - LGA S 235 S 235 23.697 2 0.636 0.636 25.400 0.000 0.000 - LGA D 236 D 236 25.595 4 0.295 0.295 25.595 0.000 0.000 - LGA G 237 G 237 20.496 0 0.104 0.104 23.901 0.000 0.000 - LGA S 238 S 238 20.542 2 0.513 0.513 20.542 0.000 0.000 - LGA A 239 A 239 20.015 1 0.689 0.689 20.079 0.000 0.000 - LGA A 240 A 240 18.127 1 0.236 0.236 19.727 0.000 0.000 - LGA E 241 E 241 17.870 5 0.363 0.363 17.870 0.000 0.000 - LGA I 242 I 242 15.416 4 0.104 0.104 16.865 0.000 0.000 - LGA R 243 R 243 17.798 7 0.065 0.065 17.798 0.000 0.000 - LGA V 244 V 244 17.621 3 0.064 0.064 19.315 0.000 0.000 - LGA S 245 S 245 21.228 2 0.143 0.143 21.228 0.000 0.000 - LGA L 246 L 246 20.228 4 0.096 0.096 23.698 0.000 0.000 - LGA R 247 R 247 23.700 7 0.104 0.104 23.700 0.000 0.000 - LGA V 248 V 248 23.069 3 0.567 0.567 23.810 0.000 0.000 - LGA Y 249 Y 249 21.033 8 0.066 0.066 21.260 0.000 0.000 - LGA G 250 G 250 18.190 0 0.334 0.334 18.871 0.000 0.000 - LGA M 251 M 251 15.999 4 0.620 0.620 16.846 0.000 0.000 - LGA T 252 T 252 9.678 3 0.025 0.025 11.676 0.000 0.000 - LGA P 253 P 253 2.879 3 0.158 0.158 5.254 16.364 9.351 - LGA T 254 T 254 3.249 3 0.065 0.065 3.249 22.727 12.987 - LGA E 255 E 255 1.994 5 0.115 0.115 2.363 51.364 22.828 - LGA Y 256 Y 256 0.447 8 0.126 0.126 0.872 95.455 31.818 - LGA L 257 L 257 0.526 4 0.100 0.100 1.308 82.273 41.136 - LGA A 258 A 258 1.017 1 0.047 0.047 1.639 65.909 52.727 - LGA P 259 P 259 1.305 3 0.079 0.079 1.466 65.455 37.403 - LGA M 260 M 260 1.248 4 0.108 0.108 1.271 69.545 34.773 - LGA N 261 N 261 1.267 4 0.144 0.144 1.506 61.818 30.909 - LGA T 262 T 262 1.071 3 0.022 0.022 1.071 69.545 39.740 - LGA V 263 V 263 0.406 3 0.131 0.131 0.657 90.909 51.948 - LGA F 264 F 264 0.998 7 0.054 0.054 1.003 77.727 28.264 - LGA N 265 N 265 1.871 4 0.155 0.155 2.087 47.727 23.864 - LGA E 266 E 266 1.989 5 0.170 0.170 2.047 47.727 21.212 - LGA W 267 W 267 1.852 10 0.058 0.058 2.059 51.364 14.675 - LGA E 268 E 268 3.683 5 0.592 0.592 3.693 19.545 8.687 - LGA K 269 K 269 5.496 5 0.507 0.507 8.320 0.455 0.202 - LGA S 270 S 270 6.221 2 0.184 0.184 7.970 0.000 0.000 - LGA E 271 E 271 11.476 5 0.033 0.033 12.823 0.000 0.000 - LGA A 272 A 272 10.251 1 0.458 0.458 10.251 0.000 0.000 - LGA A 273 A 273 9.665 1 0.259 0.259 9.909 0.000 0.000 - LGA A 274 A 274 10.127 1 0.193 0.193 11.721 0.000 0.000 - LGA V 275 V 275 13.319 3 0.079 0.079 16.392 0.000 0.000 - LGA T 276 T 276 20.277 3 0.206 0.206 22.348 0.000 0.000 - LGA P 277 P 277 25.216 3 0.114 0.114 27.961 0.000 0.000 - LGA D 278 D 278 31.384 4 0.078 0.078 33.462 0.000 0.000 - LGA G 279 G 279 30.999 0 0.136 0.136 31.646 0.000 0.000 - LGA Y 280 Y 280 28.770 8 0.666 0.666 29.207 0.000 0.000 - LGA R 281 R 281 23.093 7 0.362 0.362 24.953 0.000 0.000 - LGA V 282 V 282 19.178 3 0.040 0.040 20.128 0.000 0.000 - LGA Y 283 Y 283 16.604 8 0.109 0.109 17.730 0.000 0.000 - LGA I 284 I 284 13.163 4 0.020 0.020 14.043 0.000 0.000 - LGA N 285 N 285 14.799 4 0.604 0.604 14.927 0.000 0.000 - LGA A 286 A 286 11.134 1 0.592 0.592 12.046 0.000 0.000 - LGA V 287 V 287 11.637 3 0.626 0.626 13.551 0.000 0.000 - LGA D 288 D 288 17.669 4 0.205 0.205 21.424 0.000 0.000 - LGA K 289 K 289 20.163 5 0.400 0.400 23.842 0.000 0.000 - LGA T 290 T 290 23.670 3 0.633 0.633 23.670 0.000 0.000 - LGA D 291 D 291 22.674 4 0.642 0.642 23.477 0.000 0.000 - LGA L 292 L 292 20.839 4 0.617 0.617 21.913 0.000 0.000 - LGA T 293 T 293 25.646 3 0.600 0.600 25.646 0.000 0.000 - LGA G 294 G 294 25.769 0 0.198 0.198 28.860 0.000 0.000 - LGA I 295 I 295 29.850 4 0.697 0.697 33.005 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 97 388 388 100.00 736 388 52.72 97 0 SUMMARY(RMSD_GDC): 13.554 13.554 13.554 10.975 5.526 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 101 97 4.0 20 2.06 23.969 20.562 0.925 LGA_LOCAL RMSD: 2.061 Number of atoms: 20 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.982 Number of assigned atoms: 97 Std_ASGN_ATOMS RMSD: 13.554 Standard rmsd on all 97 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.096657 * X + -0.189837 * Y + 0.977046 * Z + -46.317513 Y_new = 0.295327 * X + -0.942905 * Y + -0.153988 * Z + 54.895077 Z_new = 0.950494 * X + 0.273664 * Y + 0.147202 * Z + 95.267387 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.887097 -1.254823 1.077294 [DEG: 108.1227 -71.8961 61.7244 ] ZXZ: 1.414477 1.423057 1.290461 [DEG: 81.0435 81.5352 73.9380 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1021s3TS116_3-D2 REMARK 2: T1021s3-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1021s3TS116_3-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 101 97 4.0 20 2.06 20.562 13.55 REMARK ---------------------------------------------------------- MOLECULE T1021s3TS116_3-D2 PFRMAT TS TARGET T1021s3 MODEL 3 PARENT 3fz2J 3eo7A 3rhwA 2q85A 2gjvA ATOM 777 N LEU 195 -49.331 17.615 72.359 1.00 1.00 ATOM 778 CA LEU 195 -48.175 17.200 73.099 1.00 1.00 ATOM 779 C LEU 195 -47.679 18.346 73.905 1.00 1.00 ATOM 780 O LEU 195 -46.474 18.489 74.097 1.00 1.00 ATOM 781 N SER 196 -48.602 19.186 74.401 1.00 1.00 ATOM 782 CA SER 196 -48.145 20.301 75.173 1.00 1.00 ATOM 783 C SER 196 -47.901 19.854 76.578 1.00 1.00 ATOM 784 O SER 196 -48.632 19.010 77.092 1.00 1.00 ATOM 785 N PRO 197 -46.883 20.434 77.172 1.00 1.00 ATOM 786 CA PRO 197 -46.689 20.300 78.593 1.00 1.00 ATOM 787 C PRO 197 -47.474 21.414 79.218 1.00 1.00 ATOM 788 O PRO 197 -47.578 22.495 78.642 1.00 1.00 ATOM 789 N LEU 198 -48.053 21.208 80.416 1.00 1.00 ATOM 790 CA LEU 198 -48.818 22.254 81.034 1.00 1.00 ATOM 791 C LEU 198 -48.182 22.451 82.364 1.00 1.00 ATOM 792 O LEU 198 -47.848 21.479 83.038 1.00 1.00 ATOM 793 N VAL 199 -47.991 23.709 82.802 1.00 1.00 ATOM 794 CA VAL 199 -47.496 23.811 84.138 1.00 1.00 ATOM 795 C VAL 199 -48.695 23.862 85.024 1.00 1.00 ATOM 796 O VAL 199 -49.693 24.489 84.675 1.00 1.00 ATOM 797 N ILE 200 -48.601 23.203 86.189 1.00 1.00 ATOM 798 CA ILE 200 -49.699 23.089 87.105 1.00 1.00 ATOM 799 C ILE 200 -49.863 24.395 87.812 1.00 1.00 ATOM 800 O ILE 200 -48.913 25.168 87.910 1.00 1.00 ATOM 801 N THR 201 -51.086 24.648 88.320 1.00 1.00 ATOM 802 CA THR 201 -51.416 25.860 89.002 1.00 1.00 ATOM 803 C THR 201 -50.493 26.033 90.173 1.00 1.00 ATOM 804 O THR 201 -50.096 27.153 90.484 1.00 1.00 ATOM 805 N ASP 202 -50.102 24.947 90.872 1.00 1.00 ATOM 806 CA ASP 202 -49.212 25.184 91.975 1.00 1.00 ATOM 807 C ASP 202 -47.927 25.739 91.443 1.00 1.00 ATOM 808 O ASP 202 -47.341 26.630 92.055 1.00 1.00 ATOM 809 N ALA 203 -47.466 25.227 90.285 1.00 1.00 ATOM 810 CA ALA 203 -46.250 25.689 89.675 1.00 1.00 ATOM 811 C ALA 203 -46.429 27.114 89.251 1.00 1.00 ATOM 812 O ALA 203 -45.517 27.922 89.405 1.00 1.00 ATOM 813 N LEU 204 -47.621 27.436 88.716 1.00 1.00 ATOM 814 CA LEU 204 -47.958 28.741 88.215 1.00 1.00 ATOM 815 C LEU 204 -47.840 29.702 89.352 1.00 1.00 ATOM 816 O LEU 204 -47.271 30.779 89.193 1.00 1.00 ATOM 817 N ARG 205 -48.380 29.304 90.512 1.00 1.00 ATOM 818 CA ARG 205 -48.387 30.168 91.649 1.00 1.00 ATOM 819 C ARG 205 -46.975 30.431 92.060 1.00 1.00 ATOM 820 O ARG 205 -46.640 31.555 92.429 1.00 1.00 ATOM 821 N GLU 206 -46.122 29.396 91.996 1.00 1.00 ATOM 822 CA GLU 206 -44.751 29.577 92.352 1.00 1.00 ATOM 823 C GLU 206 -44.115 30.499 91.355 1.00 1.00 ATOM 824 O GLU 206 -43.269 31.313 91.720 1.00 1.00 ATOM 825 N GLN 207 -44.495 30.422 90.060 1.00 1.00 ATOM 826 CA GLN 207 -43.799 31.269 89.128 1.00 1.00 ATOM 827 C GLN 207 -44.054 32.695 89.491 1.00 1.00 ATOM 828 O GLN 207 -43.125 33.500 89.518 1.00 1.00 ATOM 829 N LEU 208 -45.316 33.061 89.791 1.00 1.00 ATOM 830 CA LEU 208 -45.506 34.454 90.053 1.00 1.00 ATOM 831 C LEU 208 -44.807 34.801 91.314 1.00 1.00 ATOM 832 O LEU 208 -44.282 35.905 91.443 1.00 1.00 ATOM 833 N ARG 209 -44.775 33.867 92.270 1.00 1.00 ATOM 834 CA ARG 209 -44.137 34.150 93.512 1.00 1.00 ATOM 835 C ARG 209 -42.710 34.444 93.224 1.00 1.00 ATOM 836 O ARG 209 -42.158 35.402 93.761 1.00 1.00 ATOM 837 N VAL 210 -42.057 33.646 92.366 1.00 1.00 ATOM 838 CA VAL 210 -40.683 33.953 92.113 1.00 1.00 ATOM 839 C VAL 210 -40.583 35.254 91.384 1.00 1.00 ATOM 840 O VAL 210 -39.718 36.070 91.694 1.00 1.00 ATOM 841 N ALA 211 -41.470 35.493 90.395 1.00 1.00 ATOM 842 CA ALA 211 -41.361 36.685 89.600 1.00 1.00 ATOM 843 C ALA 211 -41.562 37.895 90.455 1.00 1.00 ATOM 844 O ALA 211 -40.782 38.842 90.375 1.00 1.00 ATOM 845 N LEU 212 -42.608 37.892 91.302 1.00 1.00 ATOM 846 CA LEU 212 -42.856 39.002 92.174 1.00 1.00 ATOM 847 C LEU 212 -41.760 39.068 93.166 1.00 1.00 ATOM 848 O LEU 212 -41.211 40.140 93.407 1.00 1.00 ATOM 849 N GLY 213 -41.455 37.888 93.727 1.00 1.00 ATOM 850 CA GLY 213 -40.533 37.688 94.796 1.00 1.00 ATOM 851 C GLY 213 -41.353 37.750 96.031 1.00 1.00 ATOM 852 O GLY 213 -42.438 38.326 96.022 1.00 1.00 ATOM 853 N GLY 214 -40.858 37.165 97.132 1.00 1.00 ATOM 854 CA GLY 214 -41.664 37.162 98.311 1.00 1.00 ATOM 855 C GLY 214 -40.749 36.909 99.451 1.00 1.00 ATOM 856 O GLY 214 -39.658 37.471 99.500 1.00 1.00 ATOM 857 N ASP 215 -41.188 36.047 100.376 1.00 1.00 ATOM 858 CA ASP 215 -40.367 35.768 101.505 1.00 1.00 ATOM 859 C ASP 215 -39.150 35.094 100.967 1.00 1.00 ATOM 860 O ASP 215 -38.067 35.236 101.530 1.00 1.00 ATOM 861 N TYR 216 -39.309 34.345 99.854 1.00 1.00 ATOM 862 CA TYR 216 -38.191 33.638 99.309 1.00 1.00 ATOM 863 C TYR 216 -37.789 34.269 98.017 1.00 1.00 ATOM 864 O TYR 216 -38.607 34.392 97.109 1.00 1.00 ATOM 865 N ASP 217 -36.502 34.663 97.949 1.00 1.00 ATOM 866 CA ASP 217 -35.883 35.179 96.766 1.00 1.00 ATOM 867 C ASP 217 -36.780 36.198 96.108 1.00 1.00 ATOM 868 O ASP 217 -37.331 35.938 95.040 1.00 1.00 ATOM 869 N ALA 218 -36.942 37.388 96.729 1.00 1.00 ATOM 870 CA ALA 218 -37.838 38.388 96.193 1.00 1.00 ATOM 871 C ALA 218 -37.423 38.726 94.798 1.00 1.00 ATOM 872 O ALA 218 -36.257 38.563 94.446 1.00 1.00 ATOM 873 N CYS 219 -38.365 39.216 93.958 1.00 1.00 ATOM 874 CA CYS 219 -37.873 39.414 92.644 1.00 1.00 ATOM 875 C CYS 219 -38.070 40.801 92.160 1.00 1.00 ATOM 876 O CYS 219 -39.062 41.440 92.507 1.00 1.00 ATOM 877 N LEU 220 -37.074 41.174 91.359 1.00 1.00 ATOM 878 CA LEU 220 -36.797 42.376 90.648 1.00 1.00 ATOM 879 C LEU 220 -37.766 42.495 89.521 1.00 1.00 ATOM 880 O LEU 220 -37.990 43.593 89.014 1.00 1.00 ATOM 881 N ALA 221 -38.352 41.360 89.125 1.00 1.00 ATOM 882 CA ALA 221 -39.171 41.221 87.959 1.00 1.00 ATOM 883 C ALA 221 -40.292 42.222 87.974 1.00 1.00 ATOM 884 O ALA 221 -40.689 42.720 86.924 1.00 1.00 ATOM 885 N MET 222 -40.816 42.538 89.165 1.00 1.00 ATOM 886 CA MET 222 -41.967 43.382 89.332 1.00 1.00 ATOM 887 C MET 222 -41.777 44.779 88.810 1.00 1.00 ATOM 888 O MET 222 -42.693 45.345 88.215 1.00 1.00 ATOM 889 N THR 223 -40.591 45.388 89.004 1.00 1.00 ATOM 890 CA THR 223 -40.421 46.788 88.704 1.00 1.00 ATOM 891 C THR 223 -40.391 46.996 87.213 1.00 1.00 ATOM 892 O THR 223 -40.294 46.032 86.458 1.00 1.00 ATOM 893 N HIS 224 -40.470 48.277 86.795 1.00 1.00 ATOM 894 CA HIS 224 -40.357 48.682 85.421 1.00 1.00 ATOM 895 C HIS 224 -38.945 48.382 85.054 1.00 1.00 ATOM 896 O HIS 224 -38.134 48.071 85.923 1.00 1.00 ATOM 897 N VAL 225 -38.587 48.466 83.756 1.00 1.00 ATOM 898 CA VAL 225 -39.454 48.810 82.671 1.00 1.00 ATOM 899 C VAL 225 -40.453 47.723 82.467 1.00 1.00 ATOM 900 O VAL 225 -41.656 47.974 82.519 1.00 1.00 ATOM 901 N ASN 226 -39.948 46.493 82.237 1.00 1.00 ATOM 902 CA ASN 226 -40.765 45.356 81.928 1.00 1.00 ATOM 903 C ASN 226 -40.114 44.163 82.545 1.00 1.00 ATOM 904 O ASN 226 -39.002 44.264 83.059 1.00 1.00 ATOM 905 N LEU 227 -40.810 43.013 82.491 1.00 1.00 ATOM 906 CA LEU 227 -40.266 41.810 83.049 1.00 1.00 ATOM 907 C LEU 227 -40.539 40.691 82.088 1.00 1.00 ATOM 908 O LEU 227 -41.622 40.626 81.510 1.00 1.00 ATOM 909 N ASP 228 -39.571 39.776 81.895 1.00 1.00 ATOM 910 CA ASP 228 -39.812 38.652 81.026 1.00 1.00 ATOM 911 C ASP 228 -39.133 37.471 81.627 1.00 1.00 ATOM 912 O ASP 228 -37.956 37.545 81.974 1.00 1.00 ATOM 913 N SER 229 -39.861 36.344 81.758 1.00 1.00 ATOM 914 CA SER 229 -39.264 35.178 82.339 1.00 1.00 ATOM 915 C SER 229 -40.142 34.010 82.031 1.00 1.00 ATOM 916 O SER 229 -41.270 34.190 81.575 1.00 1.00 ATOM 917 N SER 230 -39.640 32.784 82.281 1.00 1.00 ATOM 918 CA SER 230 -40.497 31.652 82.076 1.00 1.00 ATOM 919 C SER 230 -40.031 30.517 82.934 1.00 1.00 ATOM 920 O SER 230 -38.844 30.194 82.936 1.00 1.00 ATOM 921 N PRO 231 -40.945 29.911 83.651 1.00 1.00 ATOM 922 CA PRO 231 -40.573 28.740 84.395 1.00 1.00 ATOM 923 C PRO 231 -40.563 27.580 83.456 1.00 1.00 ATOM 924 O PRO 231 -41.317 27.566 82.486 1.00 1.00 ATOM 925 N VAL 232 -39.709 26.575 83.728 1.00 1.00 ATOM 926 CA VAL 232 -39.565 25.445 82.860 1.00 1.00 ATOM 927 C VAL 232 -39.851 24.248 83.711 1.00 1.00 ATOM 928 O VAL 232 -39.895 24.358 84.934 1.00 1.00 ATOM 929 N ALA 233 -40.046 23.074 83.090 1.00 1.00 ATOM 930 CA ALA 233 -40.286 21.910 83.892 1.00 1.00 ATOM 931 C ALA 233 -38.975 21.390 84.399 1.00 1.00 ATOM 932 O ALA 233 -37.983 21.406 83.673 1.00 1.00 ATOM 933 N ASN 234 -38.957 20.913 85.657 1.00 1.00 ATOM 934 CA ASN 234 -37.766 20.288 86.151 1.00 1.00 ATOM 935 C ASN 234 -37.662 18.944 85.501 1.00 1.00 ATOM 936 O ASN 234 -36.572 18.529 85.114 1.00 1.00 ATOM 937 N SER 235 -38.825 18.272 85.380 1.00 1.00 ATOM 938 CA SER 235 -38.959 16.923 84.904 1.00 1.00 ATOM 939 C SER 235 -38.557 16.836 83.469 1.00 1.00 ATOM 940 O SER 235 -38.443 17.859 82.798 1.00 1.00 ATOM 941 N ASP 236 -38.349 15.588 83.006 1.00 1.00 ATOM 942 CA ASP 236 -38.009 15.328 81.637 1.00 1.00 ATOM 943 C ASP 236 -39.224 15.522 80.800 1.00 1.00 ATOM 944 O ASP 236 -40.338 15.292 81.265 1.00 1.00 ATOM 945 N GLY 237 -39.002 15.947 79.540 1.00 1.00 ATOM 946 CA GLY 237 -40.066 16.143 78.601 1.00 1.00 ATOM 947 C GLY 237 -39.425 16.590 77.329 1.00 1.00 ATOM 948 O GLY 237 -38.210 16.766 77.280 1.00 1.00 ATOM 949 N SER 238 -40.230 16.791 76.266 1.00 1.00 ATOM 950 CA SER 238 -39.648 17.291 75.055 1.00 1.00 ATOM 951 C SER 238 -39.074 18.596 75.463 1.00 1.00 ATOM 952 O SER 238 -37.911 18.874 75.176 1.00 1.00 ATOM 953 N ALA 239 -39.919 19.379 76.145 1.00 1.00 ATOM 954 CA ALA 239 -39.535 20.607 76.753 1.00 1.00 ATOM 955 C ALA 239 -40.791 21.098 77.391 1.00 1.00 ATOM 956 O ALA 239 -41.865 20.980 76.807 1.00 1.00 ATOM 957 N ALA 240 -40.694 21.669 78.604 1.00 1.00 ATOM 958 CA ALA 240 -41.880 22.183 79.218 1.00 1.00 ATOM 959 C ALA 240 -41.571 23.576 79.646 1.00 1.00 ATOM 960 O ALA 240 -40.514 23.824 80.222 1.00 1.00 ATOM 961 N GLU 241 -42.503 24.509 79.372 1.00 1.00 ATOM 962 CA GLU 241 -42.241 25.870 79.698 1.00 1.00 ATOM 963 C GLU 241 -43.519 26.617 79.904 1.00 1.00 ATOM 964 O GLU 241 -44.493 26.375 79.195 1.00 1.00 ATOM 965 N ILE 242 -43.484 27.534 80.887 1.00 1.00 ATOM 966 CA ILE 242 -44.512 28.486 81.181 1.00 1.00 ATOM 967 C ILE 242 -43.834 29.820 81.053 1.00 1.00 ATOM 968 O ILE 242 -42.831 30.067 81.719 1.00 1.00 ATOM 969 N ARG 243 -44.358 30.728 80.202 1.00 1.00 ATOM 970 CA ARG 243 -43.640 31.957 80.010 1.00 1.00 ATOM 971 C ARG 243 -44.512 33.130 80.340 1.00 1.00 ATOM 972 O ARG 243 -45.725 33.068 80.153 1.00 1.00 ATOM 973 N VAL 244 -43.875 34.215 80.829 1.00 1.00 ATOM 974 CA VAL 244 -44.604 35.385 81.216 1.00 1.00 ATOM 975 C VAL 244 -43.892 36.592 80.698 1.00 1.00 ATOM 976 O VAL 244 -42.664 36.605 80.640 1.00 1.00 ATOM 977 N SER 245 -44.674 37.625 80.322 1.00 1.00 ATOM 978 CA SER 245 -44.145 38.881 79.877 1.00 1.00 ATOM 979 C SER 245 -44.838 39.921 80.704 1.00 1.00 ATOM 980 O SER 245 -46.004 39.753 81.054 1.00 1.00 ATOM 981 N LEU 246 -44.134 41.021 81.027 1.00 1.00 ATOM 982 CA LEU 246 -44.702 42.038 81.861 1.00 1.00 ATOM 983 C LEU 246 -44.325 43.351 81.264 1.00 1.00 ATOM 984 O LEU 246 -43.189 43.527 80.830 1.00 1.00 ATOM 985 N ARG 247 -45.276 44.298 81.239 1.00 1.00 ATOM 986 CA ARG 247 -44.967 45.552 80.633 1.00 1.00 ATOM 987 C ARG 247 -45.460 46.657 81.510 1.00 1.00 ATOM 988 O ARG 247 -46.461 46.494 82.204 1.00 1.00 ATOM 989 N VAL 248 -44.732 47.785 81.451 1.00 1.00 ATOM 990 CA VAL 248 -44.987 49.046 82.091 1.00 1.00 ATOM 991 C VAL 248 -44.973 49.002 83.599 1.00 1.00 ATOM 992 O VAL 248 -45.468 49.922 84.247 1.00 1.00 ATOM 993 N TYR 249 -44.407 47.949 84.228 1.00 1.00 ATOM 994 CA TYR 249 -44.144 47.933 85.652 1.00 1.00 ATOM 995 C TYR 249 -45.316 48.059 86.555 1.00 1.00 ATOM 996 O TYR 249 -46.341 48.612 86.161 1.00 1.00 ATOM 997 N GLY 250 -45.105 47.527 87.779 1.00 1.00 ATOM 998 CA GLY 250 -46.032 47.626 88.862 1.00 1.00 ATOM 999 C GLY 250 -45.255 48.199 90.002 1.00 1.00 ATOM 1000 O GLY 250 -44.052 47.970 90.104 1.00 1.00 ATOM 1001 N MET 251 -45.938 48.951 90.884 1.00 1.00 ATOM 1002 CA MET 251 -45.259 49.563 91.983 1.00 1.00 ATOM 1003 C MET 251 -44.787 48.510 92.927 1.00 1.00 ATOM 1004 O MET 251 -43.696 48.623 93.481 1.00 1.00 ATOM 1005 N THR 252 -45.590 47.450 93.134 1.00 1.00 ATOM 1006 CA THR 252 -45.203 46.495 94.132 1.00 1.00 ATOM 1007 C THR 252 -45.290 45.112 93.573 1.00 1.00 ATOM 1008 O THR 252 -45.861 44.914 92.503 1.00 1.00 ATOM 1009 N PRO 253 -44.718 44.212 94.336 1.00 1.00 ATOM 1010 CA PRO 253 -44.816 42.792 94.136 1.00 1.00 ATOM 1011 C PRO 253 -46.187 42.582 94.685 1.00 1.00 ATOM 1012 O PRO 253 -46.731 43.467 95.338 1.00 1.00 ATOM 1013 N THR 254 -46.866 41.443 94.500 1.00 1.00 ATOM 1014 CA THR 254 -48.184 41.309 95.073 1.00 1.00 ATOM 1015 C THR 254 -49.125 42.019 94.161 1.00 1.00 ATOM 1016 O THR 254 -50.105 41.432 93.709 1.00 1.00 ATOM 1017 N GLU 255 -48.854 43.305 93.857 1.00 1.00 ATOM 1018 CA GLU 255 -49.672 43.941 92.877 1.00 1.00 ATOM 1019 C GLU 255 -49.417 43.171 91.644 1.00 1.00 ATOM 1020 O GLU 255 -50.336 42.933 90.864 1.00 1.00 ATOM 1021 N TYR 256 -48.170 42.739 91.404 1.00 1.00 ATOM 1022 CA TYR 256 -47.973 41.875 90.279 1.00 1.00 ATOM 1023 C TYR 256 -48.460 40.487 90.623 1.00 1.00 ATOM 1024 O TYR 256 -48.924 39.761 89.748 1.00 1.00 ATOM 1025 N LEU 257 -48.376 40.080 91.913 1.00 1.00 ATOM 1026 CA LEU 257 -48.832 38.755 92.274 1.00 1.00 ATOM 1027 C LEU 257 -50.272 38.585 91.892 1.00 1.00 ATOM 1028 O LEU 257 -50.638 37.571 91.301 1.00 1.00 ATOM 1029 N ALA 258 -51.129 39.575 92.213 1.00 1.00 ATOM 1030 CA ALA 258 -52.545 39.395 92.034 1.00 1.00 ATOM 1031 C ALA 258 -52.869 39.176 90.589 1.00 1.00 ATOM 1032 O ALA 258 -53.672 38.306 90.261 1.00 1.00 ATOM 1033 N PRO 259 -52.282 39.917 89.697 1.00 1.00 ATOM 1034 CA PRO 259 -52.562 39.655 88.324 1.00 1.00 ATOM 1035 C PRO 259 -52.214 38.276 87.906 1.00 1.00 ATOM 1036 O PRO 259 -52.931 37.675 87.110 1.00 1.00 ATOM 1037 N MET 260 -51.115 37.701 88.414 1.00 1.00 ATOM 1038 CA MET 260 -50.865 36.352 88.007 1.00 1.00 ATOM 1039 C MET 260 -51.944 35.494 88.585 1.00 1.00 ATOM 1040 O MET 260 -52.423 34.577 87.921 1.00 1.00 ATOM 1041 N ASN 261 -52.331 35.804 89.832 1.00 1.00 ATOM 1042 CA ASN 261 -53.288 35.034 90.571 1.00 1.00 ATOM 1043 C ASN 261 -54.609 35.013 89.861 1.00 1.00 ATOM 1044 O ASN 261 -55.197 33.949 89.686 1.00 1.00 ATOM 1045 N THR 262 -55.107 36.183 89.428 1.00 1.00 ATOM 1046 CA THR 262 -56.410 36.177 88.833 1.00 1.00 ATOM 1047 C THR 262 -56.407 35.437 87.533 1.00 1.00 ATOM 1048 O THR 262 -57.343 34.695 87.243 1.00 1.00 ATOM 1049 N VAL 263 -55.356 35.605 86.708 1.00 1.00 ATOM 1050 CA VAL 263 -55.354 34.947 85.435 1.00 1.00 ATOM 1051 C VAL 263 -55.329 33.459 85.593 1.00 1.00 ATOM 1052 O VAL 263 -56.086 32.756 84.928 1.00 1.00 ATOM 1053 N PHE 264 -54.469 32.925 86.478 1.00 1.00 ATOM 1054 CA PHE 264 -54.406 31.495 86.521 1.00 1.00 ATOM 1055 C PHE 264 -55.688 30.938 87.056 1.00 1.00 ATOM 1056 O PHE 264 -56.236 29.996 86.486 1.00 1.00 ATOM 1057 N ASN 265 -56.198 31.513 88.160 1.00 1.00 ATOM 1058 CA ASN 265 -57.317 30.882 88.786 1.00 1.00 ATOM 1059 C ASN 265 -58.487 30.869 87.864 1.00 1.00 ATOM 1060 O ASN 265 -59.053 29.811 87.602 1.00 1.00 ATOM 1061 N GLU 266 -58.879 32.040 87.339 1.00 1.00 ATOM 1062 CA GLU 266 -60.063 32.031 86.538 1.00 1.00 ATOM 1063 C GLU 266 -59.836 31.317 85.239 1.00 1.00 ATOM 1064 O GLU 266 -60.577 30.394 84.906 1.00 1.00 ATOM 1065 N TRP 267 -58.801 31.732 84.488 1.00 1.00 ATOM 1066 CA TRP 267 -58.652 31.251 83.149 1.00 1.00 ATOM 1067 C TRP 267 -58.103 29.867 82.963 1.00 1.00 ATOM 1068 O TRP 267 -58.508 29.163 82.041 1.00 1.00 ATOM 1069 N GLU 268 -57.164 29.385 83.813 1.00 1.00 ATOM 1070 CA GLU 268 -56.518 28.127 83.515 1.00 1.00 ATOM 1071 C GLU 268 -57.526 27.033 83.335 1.00 1.00 ATOM 1072 O GLU 268 -58.049 26.508 84.315 1.00 1.00 ATOM 1073 N LYS 269 -57.762 26.718 82.044 1.00 1.00 ATOM 1074 CA LYS 269 -58.652 25.750 81.487 1.00 1.00 ATOM 1075 C LYS 269 -58.223 25.781 80.060 1.00 1.00 ATOM 1076 O LYS 269 -58.252 24.755 79.385 1.00 1.00 ATOM 1077 N SER 270 -57.821 26.998 79.641 1.00 1.00 ATOM 1078 CA SER 270 -57.327 27.281 78.333 1.00 1.00 ATOM 1079 C SER 270 -55.866 27.621 78.473 1.00 1.00 ATOM 1080 O SER 270 -55.347 27.661 79.586 1.00 1.00 ATOM 1081 N GLU 271 -55.194 27.876 77.334 1.00 1.00 ATOM 1082 CA GLU 271 -53.770 28.059 77.238 1.00 1.00 ATOM 1083 C GLU 271 -53.232 29.246 77.992 1.00 1.00 ATOM 1084 O GLU 271 -52.212 29.137 78.667 1.00 1.00 ATOM 1085 N ALA 272 -53.875 30.433 77.932 1.00 1.00 ATOM 1086 CA ALA 272 -53.226 31.543 78.580 1.00 1.00 ATOM 1087 C ALA 272 -54.186 32.683 78.723 1.00 1.00 ATOM 1088 O ALA 272 -55.307 32.610 78.224 1.00 1.00 ATOM 1089 N ALA 273 -53.747 33.762 79.407 1.00 1.00 ATOM 1090 CA ALA 273 -54.564 34.937 79.518 1.00 1.00 ATOM 1091 C ALA 273 -53.675 36.084 79.870 1.00 1.00 ATOM 1092 O ALA 273 -52.547 35.876 80.315 1.00 1.00 ATOM 1093 N ALA 274 -54.173 37.322 79.684 1.00 1.00 ATOM 1094 CA ALA 274 -53.373 38.452 80.049 1.00 1.00 ATOM 1095 C ALA 274 -54.278 39.476 80.650 1.00 1.00 ATOM 1096 O ALA 274 -55.431 39.596 80.241 1.00 1.00 ATOM 1097 N VAL 275 -53.759 40.236 81.634 1.00 1.00 ATOM 1098 CA VAL 275 -54.544 41.248 82.278 1.00 1.00 ATOM 1099 C VAL 275 -53.601 42.324 82.712 1.00 1.00 ATOM 1100 O VAL 275 -52.441 42.047 83.007 1.00 1.00 ATOM 1101 N THR 276 -54.088 43.582 82.767 1.00 1.00 ATOM 1102 CA THR 276 -53.207 44.639 83.170 1.00 1.00 ATOM 1103 C THR 276 -53.794 45.355 84.340 1.00 1.00 ATOM 1104 O THR 276 -54.504 46.343 84.165 1.00 1.00 ATOM 1105 N PRO 277 -53.489 44.860 85.507 1.00 1.00 ATOM 1106 CA PRO 277 -53.926 45.548 86.696 1.00 1.00 ATOM 1107 C PRO 277 -52.888 46.511 87.181 1.00 1.00 ATOM 1108 O PRO 277 -51.701 46.317 86.928 1.00 1.00 ATOM 1109 N ASP 278 -53.309 47.572 87.896 1.00 1.00 ATOM 1110 CA ASP 278 -52.389 48.485 88.509 1.00 1.00 ATOM 1111 C ASP 278 -51.394 48.968 87.500 1.00 1.00 ATOM 1112 O ASP 278 -50.242 49.219 87.842 1.00 1.00 ATOM 1113 N GLY 279 -51.808 49.120 86.229 1.00 1.00 ATOM 1114 CA GLY 279 -50.925 49.673 85.243 1.00 1.00 ATOM 1115 C GLY 279 -49.795 48.731 84.954 1.00 1.00 ATOM 1116 O GLY 279 -48.743 49.155 84.483 1.00 1.00 ATOM 1117 N TYR 280 -49.971 47.424 85.219 1.00 1.00 ATOM 1118 CA TYR 280 -48.929 46.468 84.961 1.00 1.00 ATOM 1119 C TYR 280 -49.552 45.516 83.980 1.00 1.00 ATOM 1120 O TYR 280 -50.556 44.880 84.292 1.00 1.00 ATOM 1121 N ARG 281 -49.000 45.356 82.760 1.00 1.00 ATOM 1122 CA ARG 281 -49.655 44.403 81.908 1.00 1.00 ATOM 1123 C ARG 281 -48.923 43.113 82.016 1.00 1.00 ATOM 1124 O ARG 281 -47.695 43.096 81.962 1.00 1.00 ATOM 1125 N VAL 282 -49.668 42.004 82.165 1.00 1.00 ATOM 1126 CA VAL 282 -48.994 40.752 82.294 1.00 1.00 ATOM 1127 C VAL 282 -49.622 39.774 81.354 1.00 1.00 ATOM 1128 O VAL 282 -50.846 39.702 81.267 1.00 1.00 ATOM 1129 N TYR 283 -48.795 38.996 80.634 1.00 1.00 ATOM 1130 CA TYR 283 -49.353 38.007 79.759 1.00 1.00 ATOM 1131 C TYR 283 -48.761 36.719 80.211 1.00 1.00 ATOM 1132 O TYR 283 -47.546 36.620 80.368 1.00 1.00 ATOM 1133 N ILE 284 -49.581 35.672 80.436 1.00 1.00 ATOM 1134 CA ILE 284 -48.915 34.471 80.837 1.00 1.00 ATOM 1135 C ILE 284 -49.379 33.319 80.011 1.00 1.00 ATOM 1136 O ILE 284 -50.581 33.131 79.837 1.00 1.00 ATOM 1137 N ASN 285 -48.406 32.540 79.503 1.00 1.00 ATOM 1138 CA ASN 285 -48.680 31.371 78.726 1.00 1.00 ATOM 1139 C ASN 285 -48.427 30.227 79.657 1.00 1.00 ATOM 1140 O ASN 285 -47.292 30.018 80.081 1.00 1.00 ATOM 1141 N ALA 286 -49.491 29.468 79.978 1.00 1.00 ATOM 1142 CA ALA 286 -49.471 28.398 80.935 1.00 1.00 ATOM 1143 C ALA 286 -48.613 27.271 80.471 1.00 1.00 ATOM 1144 O ALA 286 -47.970 26.611 81.283 1.00 1.00 ATOM 1145 N VAL 287 -48.586 27.043 79.151 1.00 1.00 ATOM 1146 CA VAL 287 -47.946 25.863 78.663 1.00 1.00 ATOM 1147 C VAL 287 -46.887 26.193 77.666 1.00 1.00 ATOM 1148 O VAL 287 -46.714 27.358 77.313 1.00 1.00 ATOM 1149 N ASP 288 -46.205 25.118 77.236 1.00 1.00 ATOM 1150 CA ASP 288 -45.102 25.126 76.328 1.00 1.00 ATOM 1151 C ASP 288 -45.558 25.553 74.968 1.00 1.00 ATOM 1152 O ASP 288 -44.761 26.058 74.182 1.00 1.00 ATOM 1153 N LYS 289 -46.854 25.371 74.652 1.00 1.00 ATOM 1154 CA LYS 289 -47.307 25.577 73.308 1.00 1.00 ATOM 1155 C LYS 289 -46.969 26.941 72.824 1.00 1.00 ATOM 1156 O LYS 289 -46.520 27.100 71.691 1.00 1.00 ATOM 1157 N THR 290 -47.156 27.982 73.644 1.00 1.00 ATOM 1158 CA THR 290 -46.827 29.243 73.064 1.00 1.00 ATOM 1159 C THR 290 -45.841 29.962 73.913 1.00 1.00 ATOM 1160 O THR 290 -45.971 29.974 75.134 1.00 1.00 ATOM 1161 N ASP 291 -44.853 30.571 73.232 1.00 1.00 ATOM 1162 CA ASP 291 -43.877 31.419 73.839 1.00 1.00 ATOM 1163 C ASP 291 -44.341 32.790 73.486 1.00 1.00 ATOM 1164 O ASP 291 -44.706 33.041 72.340 1.00 1.00 ATOM 1165 N LEU 292 -44.345 33.741 74.436 1.00 1.00 ATOM 1166 CA LEU 292 -44.847 34.997 73.972 1.00 1.00 ATOM 1167 C LEU 292 -43.739 35.986 73.892 1.00 1.00 ATOM 1168 O LEU 292 -43.014 36.180 74.866 1.00 1.00 ATOM 1169 N THR 293 -43.609 36.628 72.713 1.00 1.00 ATOM 1170 CA THR 293 -42.661 37.678 72.522 1.00 1.00 ATOM 1171 C THR 293 -43.504 38.904 72.342 1.00 1.00 ATOM 1172 O THR 293 -44.359 39.192 73.177 1.00 1.00 ATOM 1173 N GLY 294 -43.296 39.659 71.248 1.00 1.00 ATOM 1174 CA GLY 294 -44.085 40.836 71.046 1.00 1.00 ATOM 1175 C GLY 294 -45.333 40.460 70.313 1.00 1.00 ATOM 1176 O GLY 294 -45.577 39.279 70.077 1.00 1.00 ATOM 1177 N ILE 295 -46.120 41.493 69.950 1.00 1.00 ATOM 1178 CA ILE 295 -47.338 41.357 69.207 1.00 1.00 ATOM 1179 C ILE 295 -46.977 41.079 67.752 1.00 1.00 ATOM 1180 O ILE 295 -45.780 41.011 67.420 1.00 1.00 TER END