####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 101 ( 404), selected 97 , name T1021s3TS116_2-D2 # Molecule2: number of CA atoms 97 ( 736), selected 97 , name T1021s3-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1021s3TS116_2-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 30 245 - 274 4.95 16.02 LONGEST_CONTINUOUS_SEGMENT: 30 246 - 275 4.91 16.15 LCS_AVERAGE: 26.34 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 197 - 212 1.95 15.98 LONGEST_CONTINUOUS_SEGMENT: 16 254 - 269 1.91 14.51 LONGEST_CONTINUOUS_SEGMENT: 16 255 - 270 1.77 13.92 LONGEST_CONTINUOUS_SEGMENT: 16 256 - 271 1.89 13.71 LCS_AVERAGE: 11.98 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 256 - 270 0.94 13.76 LCS_AVERAGE: 8.31 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 97 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT L 195 L 195 4 4 24 3 3 5 6 9 11 13 15 16 17 18 19 21 21 29 35 41 46 48 50 LCS_GDT S 196 S 196 4 10 25 3 3 4 4 6 9 14 17 18 19 20 24 28 31 33 39 43 48 50 52 LCS_GDT P 197 P 197 6 16 25 3 4 6 9 13 15 16 17 18 19 20 24 27 31 33 39 43 48 50 52 LCS_GDT L 198 L 198 6 16 25 5 5 9 12 14 15 16 17 18 19 20 24 28 31 33 39 43 48 50 52 LCS_GDT V 199 V 199 6 16 25 5 5 9 12 14 15 16 17 18 19 20 24 28 31 33 39 43 48 50 52 LCS_GDT I 200 I 200 7 16 25 5 5 9 12 14 15 16 17 18 19 20 24 28 31 33 39 43 48 50 52 LCS_GDT T 201 T 201 11 16 25 5 10 11 12 14 15 16 17 18 19 20 24 28 31 33 39 43 48 50 52 LCS_GDT D 202 D 202 11 16 25 5 10 11 12 14 15 16 17 18 19 20 22 26 31 33 39 43 48 50 52 LCS_GDT A 203 A 203 11 16 25 5 10 11 12 14 15 16 17 18 19 20 24 28 31 33 39 43 48 50 52 LCS_GDT L 204 L 204 11 16 25 5 10 11 12 14 15 16 17 18 21 22 24 28 31 33 39 43 48 50 52 LCS_GDT R 205 R 205 11 16 25 5 10 11 12 14 15 16 17 18 21 23 25 29 31 33 39 43 48 50 52 LCS_GDT E 206 E 206 11 16 25 4 10 11 12 14 15 16 17 18 21 23 25 29 31 33 39 43 48 50 52 LCS_GDT Q 207 Q 207 11 16 25 4 10 11 12 14 15 16 17 18 21 22 26 28 31 33 39 43 48 50 52 LCS_GDT L 208 L 208 11 16 25 4 10 11 12 14 15 16 17 18 21 24 26 29 31 34 39 43 48 50 52 LCS_GDT R 209 R 209 11 16 25 4 10 11 12 14 15 16 17 18 21 24 26 29 31 34 39 43 48 50 52 LCS_GDT V 210 V 210 11 16 25 4 8 11 12 14 15 16 17 18 21 24 26 29 31 34 39 43 48 50 52 LCS_GDT A 211 A 211 11 16 25 4 10 11 12 14 15 16 17 18 19 22 26 29 31 34 39 43 48 50 52 LCS_GDT L 212 L 212 10 16 25 3 5 9 12 12 13 16 16 18 21 22 23 28 30 32 38 43 48 50 52 LCS_GDT D 217 D 217 3 5 25 3 5 5 6 7 9 11 13 17 21 22 24 28 31 34 39 43 48 50 52 LCS_GDT A 218 A 218 3 5 25 3 5 5 6 7 14 16 16 18 21 22 24 28 31 34 39 43 48 50 52 LCS_GDT C 219 C 219 3 4 25 3 3 3 5 5 7 8 13 16 19 22 26 28 31 34 38 43 48 50 52 LCS_GDT L 220 L 220 3 3 25 3 3 10 14 15 16 17 19 22 25 27 30 33 39 41 45 46 50 51 52 LCS_GDT A 221 A 221 3 4 25 3 3 3 5 5 8 16 17 20 25 30 35 39 41 44 47 49 51 52 53 LCS_GDT M 222 M 222 8 11 25 4 7 9 10 10 11 12 13 16 22 36 39 40 42 46 48 50 51 53 53 LCS_GDT T 223 T 223 8 11 25 4 7 9 10 11 16 19 22 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT H 224 H 224 8 11 25 4 7 9 10 10 11 16 20 23 26 34 36 39 42 46 48 50 51 53 53 LCS_GDT V 225 V 225 8 11 21 4 7 9 10 10 12 16 17 23 26 34 37 40 42 46 48 50 51 53 53 LCS_GDT N 226 N 226 8 11 21 3 7 9 10 13 16 21 22 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT L 227 L 227 8 11 21 3 7 9 10 10 15 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT D 228 D 228 8 11 21 4 7 9 11 14 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT S 229 S 229 8 11 20 4 6 9 10 12 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT S 230 S 230 7 11 20 4 5 9 10 12 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT P 231 P 231 6 11 19 4 5 8 10 10 15 17 21 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT V 232 V 232 5 11 19 4 4 6 9 11 15 20 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT A 233 A 233 5 9 19 4 4 5 7 11 15 19 22 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT N 234 N 234 5 9 19 3 3 5 6 11 15 19 22 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT S 235 S 235 5 6 19 3 4 6 9 12 15 20 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT D 236 D 236 5 6 19 3 4 5 7 9 13 17 21 25 27 34 39 40 42 46 48 50 51 53 53 LCS_GDT G 237 G 237 5 6 19 3 4 5 6 10 13 13 19 25 27 32 36 39 42 46 48 50 51 53 53 LCS_GDT S 238 S 238 5 6 19 3 5 5 6 8 10 11 14 18 22 24 27 28 30 33 37 40 43 47 50 LCS_GDT A 239 A 239 5 6 19 3 5 5 6 7 13 13 15 25 25 26 29 31 32 36 41 42 44 48 52 LCS_GDT A 240 A 240 5 6 19 3 5 5 6 8 13 17 21 25 27 30 32 36 41 44 48 50 51 53 53 LCS_GDT E 241 E 241 5 9 19 3 5 5 7 10 12 17 21 25 29 34 39 40 42 46 48 50 51 53 53 LCS_GDT I 242 I 242 5 9 19 4 5 6 7 9 12 14 21 25 27 34 39 40 42 46 48 50 51 53 53 LCS_GDT R 243 R 243 5 9 19 4 4 6 7 10 13 18 21 27 29 36 39 40 42 46 48 50 51 53 53 LCS_GDT V 244 V 244 5 9 19 4 7 10 12 14 14 18 20 25 29 36 39 40 42 46 48 50 51 53 53 LCS_GDT S 245 S 245 6 9 30 4 4 6 7 10 12 13 15 19 22 30 36 38 42 46 48 50 51 53 53 LCS_GDT L 246 L 246 6 9 30 4 4 6 7 10 12 13 15 21 26 32 36 39 42 46 48 50 51 53 53 LCS_GDT R 247 R 247 6 9 30 4 4 6 7 10 12 13 15 18 22 25 28 35 40 42 47 50 51 53 53 LCS_GDT V 248 V 248 6 9 30 4 4 6 7 10 12 13 15 19 22 28 32 38 40 44 47 50 51 53 53 LCS_GDT Y 249 Y 249 6 9 30 3 3 6 7 9 13 16 19 21 21 25 28 29 33 36 43 46 49 52 53 LCS_GDT G 250 G 250 6 9 30 3 3 6 7 10 13 15 19 21 22 25 28 30 37 42 47 50 51 53 53 LCS_GDT M 251 M 251 4 8 30 3 4 4 6 8 13 16 19 21 26 33 36 39 41 44 48 50 51 53 53 LCS_GDT T 252 T 252 4 6 30 3 4 4 5 8 15 16 22 28 29 36 39 40 42 46 48 50 51 53 53 LCS_GDT P 253 P 253 4 6 30 3 4 4 5 7 15 19 20 24 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT T 254 T 254 4 16 30 3 4 4 10 13 15 19 20 23 25 28 33 39 41 44 47 49 51 53 53 LCS_GDT E 255 E 255 3 16 30 3 4 4 4 7 9 13 16 18 22 25 27 31 34 39 45 48 51 52 53 LCS_GDT Y 256 Y 256 15 16 30 7 14 14 14 15 17 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT L 257 L 257 15 16 30 7 14 14 14 15 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT A 258 A 258 15 16 30 7 14 14 14 15 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT P 259 P 259 15 16 30 7 14 14 14 15 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT M 260 M 260 15 16 30 7 14 14 14 15 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT N 261 N 261 15 16 30 8 14 14 14 15 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT T 262 T 262 15 16 30 8 14 14 14 15 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT V 263 V 263 15 16 30 8 14 14 14 15 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT F 264 F 264 15 16 30 8 14 14 14 15 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT N 265 N 265 15 16 30 8 14 14 14 15 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT E 266 E 266 15 16 30 8 14 14 14 15 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT W 267 W 267 15 16 30 8 14 14 14 15 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT E 268 E 268 15 16 30 8 14 14 14 15 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT K 269 K 269 15 16 30 7 14 14 14 15 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT S 270 S 270 15 16 30 3 8 12 14 15 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT E 271 E 271 5 16 30 3 4 6 9 12 15 20 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT A 272 A 272 5 9 30 3 5 5 6 8 13 17 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT A 273 A 273 5 14 30 3 5 5 8 11 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT A 274 A 274 11 14 30 3 9 11 13 14 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT V 275 V 275 11 14 30 3 9 11 13 14 14 16 20 23 26 30 34 38 42 46 48 50 51 53 53 LCS_GDT T 276 T 276 11 14 26 3 9 11 13 14 14 14 16 18 21 24 26 29 31 34 35 38 41 45 51 LCS_GDT P 277 P 277 11 14 26 3 9 11 13 14 14 14 16 17 19 23 26 29 31 34 35 38 39 41 45 LCS_GDT D 278 D 278 11 14 26 3 9 11 13 14 14 14 16 18 21 24 26 29 31 34 35 38 39 41 45 LCS_GDT G 279 G 279 11 14 26 3 9 11 13 14 14 14 16 18 21 24 26 29 31 34 35 38 39 41 45 LCS_GDT Y 280 Y 280 11 14 26 3 9 11 13 14 14 14 16 18 21 24 26 29 31 32 35 36 39 41 45 LCS_GDT R 281 R 281 11 14 26 3 9 11 13 14 14 14 16 18 21 24 26 29 31 34 35 38 39 41 45 LCS_GDT V 282 V 282 11 14 26 3 9 11 13 14 14 14 16 18 21 24 26 29 31 34 35 46 49 52 53 LCS_GDT Y 283 Y 283 11 14 26 4 8 11 13 14 14 14 16 20 22 30 34 38 42 46 48 50 51 53 53 LCS_GDT I 284 I 284 11 14 26 4 8 11 13 14 16 21 24 29 32 36 39 40 42 46 48 50 51 53 53 LCS_GDT N 285 N 285 7 14 26 4 6 8 13 14 14 21 22 23 25 28 32 35 40 45 47 50 51 53 53 LCS_GDT A 286 A 286 5 14 26 3 6 11 13 14 14 14 20 21 25 28 30 31 34 38 42 45 48 51 53 LCS_GDT V 287 V 287 3 9 26 3 3 4 5 8 11 13 15 18 21 24 26 29 31 34 35 38 39 41 45 LCS_GDT D 288 D 288 3 9 26 3 3 4 6 9 11 13 15 18 21 24 26 29 31 34 35 38 39 41 45 LCS_GDT K 289 K 289 3 9 26 3 3 4 6 9 11 12 14 18 21 24 26 29 31 34 35 38 39 41 45 LCS_GDT T 290 T 290 4 6 26 3 3 4 5 9 10 14 15 18 21 24 26 29 31 34 35 38 39 41 45 LCS_GDT D 291 D 291 4 5 26 3 3 4 6 8 9 14 15 18 21 24 26 29 31 34 35 38 39 41 45 LCS_GDT L 292 L 292 4 5 26 3 4 5 6 9 11 12 14 18 20 23 26 29 30 31 35 38 39 40 42 LCS_GDT T 293 T 293 4 5 25 3 4 4 5 9 11 14 15 17 18 22 24 29 29 30 33 36 38 40 41 LCS_GDT G 294 G 294 4 5 22 3 4 4 5 5 6 8 15 17 18 18 19 21 24 26 30 33 33 35 37 LCS_GDT I 295 I 295 4 5 20 3 4 4 5 9 11 14 15 17 18 18 19 21 21 21 22 23 26 27 30 LCS_AVERAGE LCS_A: 15.54 ( 8.31 11.98 26.34 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 14 14 14 15 18 21 24 29 32 36 39 40 42 46 48 50 51 53 53 GDT PERCENT_AT 8.25 14.43 14.43 14.43 15.46 18.56 21.65 24.74 29.90 32.99 37.11 40.21 41.24 43.30 47.42 49.48 51.55 52.58 54.64 54.64 GDT RMS_LOCAL 0.31 0.58 0.58 0.58 0.94 2.06 2.30 2.81 3.28 3.63 3.96 4.21 4.31 4.59 4.98 5.17 5.36 5.44 5.74 5.66 GDT RMS_ALL_AT 14.09 13.93 13.93 13.93 13.76 13.66 13.68 13.77 13.85 13.80 13.89 14.00 14.00 14.10 14.16 14.29 14.37 14.29 14.43 14.16 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA L 195 L 195 16.690 4 0.618 0.618 17.541 0.000 0.000 - LGA S 196 S 196 17.569 2 0.113 0.113 17.569 0.000 0.000 - LGA P 197 P 197 18.557 3 0.672 0.672 18.618 0.000 0.000 - LGA L 198 L 198 20.230 4 0.060 0.060 20.637 0.000 0.000 - LGA V 199 V 199 22.732 3 0.039 0.039 22.732 0.000 0.000 - LGA I 200 I 200 18.070 4 0.063 0.063 19.401 0.000 0.000 - LGA T 201 T 201 15.396 3 0.098 0.098 16.818 0.000 0.000 - LGA D 202 D 202 20.376 4 0.193 0.193 21.273 0.000 0.000 - LGA A 203 A 203 21.436 1 0.031 0.031 21.436 0.000 0.000 - LGA L 204 L 204 15.408 4 0.084 0.084 17.210 0.000 0.000 - LGA R 205 R 205 15.152 7 0.037 0.037 16.273 0.000 0.000 - LGA E 206 E 206 19.977 5 0.298 0.298 20.346 0.000 0.000 - LGA Q 207 Q 207 19.243 5 0.060 0.060 19.243 0.000 0.000 - LGA L 208 L 208 13.668 4 0.037 0.037 15.262 0.000 0.000 - LGA R 209 R 209 14.339 7 0.083 0.083 15.875 0.000 0.000 - LGA V 210 V 210 19.566 3 0.193 0.193 19.969 0.000 0.000 - LGA A 211 A 211 18.765 1 0.195 0.195 18.765 0.000 0.000 - LGA L 212 L 212 16.282 4 0.113 0.113 17.377 0.000 0.000 - LGA D 217 D 217 17.202 4 0.562 0.562 19.310 0.000 0.000 - LGA A 218 A 218 12.798 1 0.086 0.086 14.542 0.000 0.000 - LGA C 219 C 219 12.245 2 0.649 0.649 12.871 0.000 0.000 - LGA L 220 L 220 7.842 4 0.661 0.661 9.892 0.000 0.000 - LGA A 221 A 221 8.323 1 0.595 0.595 8.323 0.000 0.000 - LGA M 222 M 222 8.244 4 0.617 0.617 8.244 0.000 0.000 - LGA T 223 T 223 6.994 3 0.614 0.614 8.572 0.000 0.000 - LGA H 224 H 224 12.094 6 0.095 0.095 13.406 0.000 0.000 - LGA V 225 V 225 9.554 3 0.026 0.026 9.820 0.000 0.000 - LGA N 226 N 226 5.676 4 0.575 0.575 7.378 4.091 2.045 - LGA L 227 L 227 3.737 4 0.357 0.357 4.184 26.364 13.182 - LGA D 228 D 228 2.169 4 0.035 0.035 2.943 39.545 19.773 - LGA S 229 S 229 2.623 2 0.060 0.060 3.887 31.818 21.212 - LGA S 230 S 230 2.110 2 0.092 0.092 4.079 23.182 15.455 - LGA P 231 P 231 6.880 3 0.171 0.171 6.880 0.455 0.260 - LGA V 232 V 232 5.265 3 0.074 0.074 9.175 0.000 0.000 - LGA A 233 A 233 7.423 1 0.680 0.680 7.744 0.000 0.000 - LGA N 234 N 234 7.937 4 0.310 0.310 7.937 0.000 0.000 - LGA S 235 S 235 4.618 2 0.225 0.225 6.156 0.455 0.303 - LGA D 236 D 236 9.637 4 0.161 0.161 12.275 0.000 0.000 - LGA G 237 G 237 12.550 0 0.083 0.083 14.789 0.000 0.000 - LGA S 238 S 238 16.702 2 0.215 0.215 16.702 0.000 0.000 - LGA A 239 A 239 14.740 1 0.615 0.615 15.933 0.000 0.000 - LGA A 240 A 240 10.455 1 0.359 0.359 12.035 0.000 0.000 - LGA E 241 E 241 9.100 5 0.580 0.580 9.658 0.000 0.000 - LGA I 242 I 242 8.374 4 0.207 0.207 9.031 0.000 0.000 - LGA R 243 R 243 6.208 7 0.036 0.036 6.339 0.000 0.000 - LGA V 244 V 244 5.926 3 0.080 0.080 6.881 0.000 0.000 - LGA S 245 S 245 8.937 2 0.154 0.154 9.399 0.000 0.000 - LGA L 246 L 246 9.096 4 0.118 0.118 12.029 0.000 0.000 - LGA R 247 R 247 13.082 7 0.073 0.073 13.082 0.000 0.000 - LGA V 248 V 248 13.150 3 0.594 0.594 16.475 0.000 0.000 - LGA Y 249 Y 249 17.430 8 0.454 0.454 17.430 0.000 0.000 - LGA G 250 G 250 17.684 0 0.589 0.589 19.061 0.000 0.000 - LGA M 251 M 251 14.121 4 0.182 0.182 14.729 0.000 0.000 - LGA T 252 T 252 9.162 3 0.021 0.021 10.999 0.000 0.000 - LGA P 253 P 253 8.916 3 0.619 0.619 9.655 0.000 0.000 - LGA T 254 T 254 9.500 3 0.599 0.599 9.500 0.000 0.000 - LGA E 255 E 255 9.753 5 0.679 0.679 9.753 0.000 0.000 - LGA Y 256 Y 256 3.439 8 0.649 0.649 5.489 13.636 4.545 - LGA L 257 L 257 2.780 4 0.122 0.122 3.017 25.000 12.500 - LGA A 258 A 258 2.463 1 0.042 0.042 2.613 35.455 28.364 - LGA P 259 P 259 2.364 3 0.041 0.041 2.572 38.636 22.078 - LGA M 260 M 260 2.422 4 0.124 0.124 2.461 41.364 20.682 - LGA N 261 N 261 1.768 4 0.125 0.125 2.082 55.000 27.500 - LGA T 262 T 262 0.378 3 0.048 0.048 0.794 90.909 51.948 - LGA V 263 V 263 0.750 3 0.130 0.130 2.313 71.364 40.779 - LGA F 264 F 264 1.877 7 0.065 0.065 2.352 51.364 18.678 - LGA N 265 N 265 1.236 4 0.086 0.086 1.657 61.818 30.909 - LGA E 266 E 266 2.310 5 0.146 0.146 3.376 33.636 14.949 - LGA W 267 W 267 3.583 10 0.109 0.109 3.722 16.818 4.805 - LGA E 268 E 268 3.111 5 0.072 0.072 3.528 16.364 7.273 - LGA K 269 K 269 3.376 5 0.532 0.532 3.376 23.182 10.303 - LGA S 270 S 270 1.690 2 0.160 0.160 2.248 55.455 36.970 - LGA E 271 E 271 3.837 5 0.026 0.026 5.653 13.636 6.061 - LGA A 272 A 272 5.045 1 0.465 0.465 5.045 12.727 10.182 - LGA A 273 A 273 3.162 1 0.240 0.240 3.550 18.636 14.909 - LGA A 274 A 274 3.055 1 0.207 0.207 5.084 10.455 8.364 - LGA V 275 V 275 6.801 3 0.109 0.109 9.400 0.000 0.000 - LGA T 276 T 276 13.233 3 0.041 0.041 15.054 0.000 0.000 - LGA P 277 P 277 18.900 3 0.607 0.607 22.251 0.000 0.000 - LGA D 278 D 278 21.941 4 0.334 0.334 24.796 0.000 0.000 - LGA G 279 G 279 22.239 0 0.125 0.125 22.419 0.000 0.000 - LGA Y 280 Y 280 19.996 8 0.645 0.645 20.589 0.000 0.000 - LGA R 281 R 281 14.318 7 0.450 0.450 16.106 0.000 0.000 - LGA V 282 V 282 11.432 3 0.079 0.079 12.473 0.000 0.000 - LGA Y 283 Y 283 7.671 8 0.053 0.053 9.085 0.000 0.000 - LGA I 284 I 284 3.223 4 0.061 0.061 4.819 9.091 4.545 - LGA N 285 N 285 6.290 4 0.596 0.596 7.333 1.364 0.682 - LGA A 286 A 286 8.532 1 0.145 0.145 11.307 0.000 0.000 - LGA V 287 V 287 13.920 3 0.662 0.662 15.418 0.000 0.000 - LGA D 288 D 288 18.702 4 0.568 0.568 22.499 0.000 0.000 - LGA K 289 K 289 21.713 5 0.669 0.669 22.791 0.000 0.000 - LGA T 290 T 290 22.197 3 0.618 0.618 23.613 0.000 0.000 - LGA D 291 D 291 21.048 4 0.296 0.296 22.695 0.000 0.000 - LGA L 292 L 292 26.151 4 0.037 0.037 28.273 0.000 0.000 - LGA T 293 T 293 30.307 3 0.389 0.389 30.329 0.000 0.000 - LGA G 294 G 294 31.655 0 0.590 0.590 32.010 0.000 0.000 - LGA I 295 I 295 33.360 4 0.706 0.706 35.059 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 97 388 388 100.00 736 388 52.72 97 0 SUMMARY(RMSD_GDC): 12.689 12.642 12.642 8.472 4.631 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 101 97 4.0 24 2.77 25.773 22.374 0.837 LGA_LOCAL RMSD: 2.768 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.749 Number of assigned atoms: 97 Std_ASGN_ATOMS RMSD: 12.689 Standard rmsd on all 97 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.758648 * X + -0.049240 * Y + 0.649638 * Z + -53.594193 Y_new = 0.650355 * X + -0.116357 * Y + 0.750666 * Z + 57.684582 Z_new = 0.038627 * X + 0.991986 * Y + 0.120297 * Z + 77.461960 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.432901 -0.038637 1.450116 [DEG: 139.3950 -2.2137 83.0856 ] ZXZ: 2.428217 1.450207 0.038920 [DEG: 139.1266 83.0907 2.2299 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1021s3TS116_2-D2 REMARK 2: T1021s3-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1021s3TS116_2-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 101 97 4.0 24 2.77 22.374 12.69 REMARK ---------------------------------------------------------- MOLECULE T1021s3TS116_2-D2 PFRMAT TS TARGET T1021s3 MODEL 2 PARENT 3fz2J 3eo7A 3rhwA 2q85A 2gjvA ATOM 777 N LEU 195 -63.018 17.298 75.557 1.00 1.00 ATOM 778 CA LEU 195 -63.890 16.689 76.518 1.00 1.00 ATOM 779 C LEU 195 -63.644 17.203 77.904 1.00 1.00 ATOM 780 O LEU 195 -64.589 17.395 78.666 1.00 1.00 ATOM 781 N SER 196 -62.369 17.446 78.267 1.00 1.00 ATOM 782 CA SER 196 -62.032 17.725 79.638 1.00 1.00 ATOM 783 C SER 196 -62.564 19.039 80.118 1.00 1.00 ATOM 784 O SER 196 -62.426 20.048 79.430 1.00 1.00 ATOM 785 N PRO 197 -63.139 18.942 81.291 1.00 1.00 ATOM 786 CA PRO 197 -63.636 20.118 81.953 1.00 1.00 ATOM 787 C PRO 197 -62.543 20.836 82.683 1.00 1.00 ATOM 788 O PRO 197 -61.623 20.201 83.193 1.00 1.00 ATOM 789 N LEU 198 -62.641 22.173 82.740 1.00 1.00 ATOM 790 CA LEU 198 -61.726 23.054 83.402 1.00 1.00 ATOM 791 C LEU 198 -61.919 22.886 84.885 1.00 1.00 ATOM 792 O LEU 198 -60.975 23.062 85.654 1.00 1.00 ATOM 793 N VAL 199 -63.148 22.538 85.310 1.00 1.00 ATOM 794 CA VAL 199 -63.512 22.499 86.700 1.00 1.00 ATOM 795 C VAL 199 -62.569 21.617 87.454 1.00 1.00 ATOM 796 O VAL 199 -62.228 21.914 88.597 1.00 1.00 ATOM 797 N ILE 200 -62.119 20.514 86.836 1.00 1.00 ATOM 798 CA ILE 200 -61.253 19.579 87.496 1.00 1.00 ATOM 799 C ILE 200 -59.980 20.264 87.898 1.00 1.00 ATOM 800 O ILE 200 -59.455 20.006 88.979 1.00 1.00 ATOM 801 N THR 201 -59.468 21.156 87.032 1.00 1.00 ATOM 802 CA THR 201 -58.217 21.848 87.210 1.00 1.00 ATOM 803 C THR 201 -58.277 22.942 88.243 1.00 1.00 ATOM 804 O THR 201 -57.258 23.281 88.842 1.00 1.00 ATOM 805 N ASP 202 -59.464 23.527 88.496 1.00 1.00 ATOM 806 CA ASP 202 -59.635 24.743 89.254 1.00 1.00 ATOM 807 C ASP 202 -58.987 24.685 90.603 1.00 1.00 ATOM 808 O ASP 202 -58.427 25.679 91.061 1.00 1.00 ATOM 809 N ALA 203 -59.026 23.531 91.285 1.00 1.00 ATOM 810 CA ALA 203 -58.513 23.449 92.626 1.00 1.00 ATOM 811 C ALA 203 -57.056 23.807 92.640 1.00 1.00 ATOM 812 O ALA 203 -56.583 24.428 93.589 1.00 1.00 ATOM 813 N LEU 204 -56.338 23.417 91.576 1.00 1.00 ATOM 814 CA LEU 204 -54.919 23.532 91.383 1.00 1.00 ATOM 815 C LEU 204 -54.444 24.956 91.312 1.00 1.00 ATOM 816 O LEU 204 -53.299 25.243 91.655 1.00 1.00 ATOM 817 N ARG 205 -55.296 25.903 90.875 1.00 1.00 ATOM 818 CA ARG 205 -54.853 27.239 90.572 1.00 1.00 ATOM 819 C ARG 205 -54.104 27.858 91.710 1.00 1.00 ATOM 820 O ARG 205 -53.051 28.456 91.502 1.00 1.00 ATOM 821 N GLU 206 -54.601 27.736 92.950 1.00 1.00 ATOM 822 CA GLU 206 -53.922 28.376 94.037 1.00 1.00 ATOM 823 C GLU 206 -52.548 27.790 94.186 1.00 1.00 ATOM 824 O GLU 206 -51.578 28.527 94.349 1.00 1.00 ATOM 825 N GLN 207 -52.442 26.450 94.124 1.00 1.00 ATOM 826 CA GLN 207 -51.197 25.775 94.355 1.00 1.00 ATOM 827 C GLN 207 -50.190 26.126 93.299 1.00 1.00 ATOM 828 O GLN 207 -49.052 26.463 93.620 1.00 1.00 ATOM 829 N LEU 208 -50.589 26.061 92.018 1.00 1.00 ATOM 830 CA LEU 208 -49.662 26.328 90.954 1.00 1.00 ATOM 831 C LEU 208 -49.259 27.765 90.988 1.00 1.00 ATOM 832 O LEU 208 -48.088 28.081 90.782 1.00 1.00 ATOM 833 N ARG 209 -50.230 28.647 91.259 1.00 1.00 ATOM 834 CA ARG 209 -50.013 30.060 91.276 1.00 1.00 ATOM 835 C ARG 209 -48.944 30.349 92.276 1.00 1.00 ATOM 836 O ARG 209 -47.993 31.066 91.973 1.00 1.00 ATOM 837 N VAL 210 -49.075 29.792 93.490 1.00 1.00 ATOM 838 CA VAL 210 -48.096 30.103 94.484 1.00 1.00 ATOM 839 C VAL 210 -46.749 29.570 94.097 1.00 1.00 ATOM 840 O VAL 210 -45.772 30.316 94.088 1.00 1.00 ATOM 841 N ALA 211 -46.650 28.269 93.759 1.00 1.00 ATOM 842 CA ALA 211 -45.348 27.724 93.493 1.00 1.00 ATOM 843 C ALA 211 -44.738 28.273 92.240 1.00 1.00 ATOM 844 O ALA 211 -43.620 28.785 92.272 1.00 1.00 ATOM 845 N LEU 212 -45.466 28.184 91.110 1.00 1.00 ATOM 846 CA LEU 212 -44.912 28.572 89.840 1.00 1.00 ATOM 847 C LEU 212 -44.718 30.045 89.800 1.00 1.00 ATOM 848 O LEU 212 -43.644 30.516 89.431 1.00 1.00 ATOM 849 N GLY 213 -45.767 30.787 90.190 1.00 1.00 ATOM 850 CA GLY 213 -45.686 32.210 90.170 1.00 1.00 ATOM 851 C GLY 213 -44.635 32.552 91.143 1.00 1.00 ATOM 852 O GLY 213 -43.850 33.467 90.906 1.00 1.00 ATOM 853 N GLY 214 -44.616 31.798 92.258 1.00 1.00 ATOM 854 CA GLY 214 -43.678 31.989 93.315 1.00 1.00 ATOM 855 C GLY 214 -44.409 32.683 94.409 1.00 1.00 ATOM 856 O GLY 214 -45.251 33.538 94.142 1.00 1.00 ATOM 857 N ASP 215 -44.084 32.322 95.663 1.00 1.00 ATOM 858 CA ASP 215 -44.699 32.953 96.789 1.00 1.00 ATOM 859 C ASP 215 -43.842 34.132 97.083 1.00 1.00 ATOM 860 O ASP 215 -43.845 35.098 96.324 1.00 1.00 ATOM 861 N TYR 216 -43.092 34.060 98.193 1.00 1.00 ATOM 862 CA TYR 216 -42.224 35.149 98.505 1.00 1.00 ATOM 863 C TYR 216 -41.277 35.233 97.363 1.00 1.00 ATOM 864 O TYR 216 -41.009 36.323 96.864 1.00 1.00 ATOM 865 N ASP 217 -40.757 34.072 96.921 1.00 1.00 ATOM 866 CA ASP 217 -39.882 34.108 95.794 1.00 1.00 ATOM 867 C ASP 217 -40.633 33.519 94.646 1.00 1.00 ATOM 868 O ASP 217 -40.882 32.315 94.626 1.00 1.00 ATOM 869 N ALA 218 -40.983 34.389 93.685 1.00 1.00 ATOM 870 CA ALA 218 -41.731 34.058 92.521 1.00 1.00 ATOM 871 C ALA 218 -40.956 33.074 91.716 1.00 1.00 ATOM 872 O ALA 218 -41.526 32.120 91.192 1.00 1.00 ATOM 873 N CYS 219 -39.638 33.317 91.631 1.00 1.00 ATOM 874 CA CYS 219 -38.678 32.584 90.861 1.00 1.00 ATOM 875 C CYS 219 -38.518 33.386 89.618 1.00 1.00 ATOM 876 O CYS 219 -39.489 33.606 88.898 1.00 1.00 ATOM 877 N LEU 220 -37.280 33.829 89.345 1.00 1.00 ATOM 878 CA LEU 220 -37.071 34.667 88.206 1.00 1.00 ATOM 879 C LEU 220 -37.167 33.826 86.983 1.00 1.00 ATOM 880 O LEU 220 -36.640 32.716 86.955 1.00 1.00 ATOM 881 N ALA 221 -37.843 34.359 85.952 1.00 1.00 ATOM 882 CA ALA 221 -37.915 33.661 84.711 1.00 1.00 ATOM 883 C ALA 221 -37.398 34.616 83.690 1.00 1.00 ATOM 884 O ALA 221 -37.793 35.780 83.679 1.00 1.00 ATOM 885 N MET 222 -36.508 34.129 82.809 1.00 1.00 ATOM 886 CA MET 222 -35.959 34.978 81.799 1.00 1.00 ATOM 887 C MET 222 -36.975 35.073 80.717 1.00 1.00 ATOM 888 O MET 222 -37.930 34.300 80.699 1.00 1.00 ATOM 889 N THR 223 -36.778 36.025 79.791 1.00 1.00 ATOM 890 CA THR 223 -37.746 36.201 78.759 1.00 1.00 ATOM 891 C THR 223 -37.807 34.941 77.963 1.00 1.00 ATOM 892 O THR 223 -36.801 34.247 77.830 1.00 1.00 ATOM 893 N HIS 224 -39.006 34.646 77.420 1.00 1.00 ATOM 894 CA HIS 224 -39.192 33.495 76.588 1.00 1.00 ATOM 895 C HIS 224 -38.876 32.253 77.363 1.00 1.00 ATOM 896 O HIS 224 -38.349 31.295 76.803 1.00 1.00 ATOM 897 N VAL 225 -39.202 32.245 78.669 1.00 1.00 ATOM 898 CA VAL 225 -38.977 31.062 79.454 1.00 1.00 ATOM 899 C VAL 225 -40.240 30.815 80.212 1.00 1.00 ATOM 900 O VAL 225 -40.951 31.758 80.550 1.00 1.00 ATOM 901 N ASN 226 -40.552 29.538 80.508 1.00 1.00 ATOM 902 CA ASN 226 -41.770 29.296 81.222 1.00 1.00 ATOM 903 C ASN 226 -41.572 28.182 82.196 1.00 1.00 ATOM 904 O ASN 226 -40.600 27.437 82.091 1.00 1.00 ATOM 905 N LEU 227 -42.517 28.068 83.153 1.00 1.00 ATOM 906 CA LEU 227 -42.517 26.999 84.107 1.00 1.00 ATOM 907 C LEU 227 -43.839 26.314 83.953 1.00 1.00 ATOM 908 O LEU 227 -44.862 26.979 83.805 1.00 1.00 ATOM 909 N ASP 228 -43.851 24.968 83.990 1.00 1.00 ATOM 910 CA ASP 228 -45.075 24.242 83.804 1.00 1.00 ATOM 911 C ASP 228 -45.175 23.180 84.849 1.00 1.00 ATOM 912 O ASP 228 -44.160 22.628 85.268 1.00 1.00 ATOM 913 N SER 229 -46.416 22.872 85.281 1.00 1.00 ATOM 914 CA SER 229 -46.627 21.800 86.209 1.00 1.00 ATOM 915 C SER 229 -47.764 20.997 85.663 1.00 1.00 ATOM 916 O SER 229 -48.694 21.558 85.087 1.00 1.00 ATOM 917 N SER 230 -47.724 19.660 85.836 1.00 1.00 ATOM 918 CA SER 230 -48.820 18.887 85.339 1.00 1.00 ATOM 919 C SER 230 -49.376 18.109 86.483 1.00 1.00 ATOM 920 O SER 230 -48.746 17.161 86.948 1.00 1.00 ATOM 921 N PRO 231 -50.537 18.508 86.913 1.00 1.00 ATOM 922 CA PRO 231 -51.167 17.742 87.951 1.00 1.00 ATOM 923 C PRO 231 -51.930 16.602 87.378 1.00 1.00 ATOM 924 O PRO 231 -52.304 16.636 86.208 1.00 1.00 ATOM 925 N VAL 232 -52.182 15.563 88.198 1.00 1.00 ATOM 926 CA VAL 232 -52.931 14.425 87.769 1.00 1.00 ATOM 927 C VAL 232 -54.271 14.519 88.422 1.00 1.00 ATOM 928 O VAL 232 -54.359 14.836 89.606 1.00 1.00 ATOM 929 N ALA 233 -55.322 14.234 87.640 1.00 1.00 ATOM 930 CA ALA 233 -56.687 14.261 88.063 1.00 1.00 ATOM 931 C ALA 233 -57.300 13.050 87.450 1.00 1.00 ATOM 932 O ALA 233 -56.661 12.375 86.647 1.00 1.00 ATOM 933 N ASN 234 -58.558 12.750 87.807 1.00 1.00 ATOM 934 CA ASN 234 -59.146 11.572 87.252 1.00 1.00 ATOM 935 C ASN 234 -59.182 11.721 85.764 1.00 1.00 ATOM 936 O ASN 234 -59.558 12.777 85.259 1.00 1.00 ATOM 937 N SER 235 -58.789 10.633 85.071 1.00 1.00 ATOM 938 CA SER 235 -58.778 10.464 83.643 1.00 1.00 ATOM 939 C SER 235 -57.795 11.379 82.978 1.00 1.00 ATOM 940 O SER 235 -57.753 11.453 81.752 1.00 1.00 ATOM 941 N ASP 236 -56.963 12.106 83.746 1.00 1.00 ATOM 942 CA ASP 236 -55.980 12.937 83.106 1.00 1.00 ATOM 943 C ASP 236 -54.836 13.114 84.063 1.00 1.00 ATOM 944 O ASP 236 -55.012 13.690 85.135 1.00 1.00 ATOM 945 N GLY 237 -53.622 12.634 83.713 1.00 1.00 ATOM 946 CA GLY 237 -52.489 12.670 84.603 1.00 1.00 ATOM 947 C GLY 237 -51.742 13.955 84.420 1.00 1.00 ATOM 948 O GLY 237 -52.356 15.003 84.232 1.00 1.00 ATOM 949 N SER 238 -50.393 13.898 84.465 1.00 1.00 ATOM 950 CA SER 238 -49.568 15.063 84.292 1.00 1.00 ATOM 951 C SER 238 -49.005 14.999 82.903 1.00 1.00 ATOM 952 O SER 238 -48.431 13.983 82.518 1.00 1.00 ATOM 953 N ALA 239 -49.168 16.101 82.147 1.00 1.00 ATOM 954 CA ALA 239 -48.849 16.204 80.749 1.00 1.00 ATOM 955 C ALA 239 -50.008 16.983 80.241 1.00 1.00 ATOM 956 O ALA 239 -50.537 17.835 80.951 1.00 1.00 ATOM 957 N ALA 240 -50.461 16.729 79.002 1.00 1.00 ATOM 958 CA ALA 240 -51.653 17.442 78.670 1.00 1.00 ATOM 959 C ALA 240 -52.777 16.755 79.391 1.00 1.00 ATOM 960 O ALA 240 -53.235 15.700 78.958 1.00 1.00 ATOM 961 N GLU 241 -53.220 17.381 80.501 1.00 1.00 ATOM 962 CA GLU 241 -54.316 17.013 81.350 1.00 1.00 ATOM 963 C GLU 241 -54.555 18.268 82.083 1.00 1.00 ATOM 964 O GLU 241 -54.847 19.294 81.472 1.00 1.00 ATOM 965 N ILE 242 -54.445 18.278 83.420 1.00 1.00 ATOM 966 CA ILE 242 -54.518 19.606 83.930 1.00 1.00 ATOM 967 C ILE 242 -53.114 20.100 83.980 1.00 1.00 ATOM 968 O ILE 242 -52.375 19.770 84.906 1.00 1.00 ATOM 969 N ARG 243 -52.748 20.910 82.966 1.00 1.00 ATOM 970 CA ARG 243 -51.422 21.438 82.879 1.00 1.00 ATOM 971 C ARG 243 -51.533 22.925 82.947 1.00 1.00 ATOM 972 O ARG 243 -52.407 23.507 82.310 1.00 1.00 ATOM 973 N VAL 244 -50.636 23.559 83.722 1.00 1.00 ATOM 974 CA VAL 244 -50.681 24.984 83.834 1.00 1.00 ATOM 975 C VAL 244 -49.322 25.499 83.506 1.00 1.00 ATOM 976 O VAL 244 -48.327 24.836 83.791 1.00 1.00 ATOM 977 N SER 245 -49.254 26.699 82.903 1.00 1.00 ATOM 978 CA SER 245 -47.961 27.213 82.569 1.00 1.00 ATOM 979 C SER 245 -47.971 28.691 82.749 1.00 1.00 ATOM 980 O SER 245 -49.023 29.317 82.650 1.00 1.00 ATOM 981 N LEU 246 -46.778 29.258 83.011 1.00 1.00 ATOM 982 CA LEU 246 -46.630 30.680 83.059 1.00 1.00 ATOM 983 C LEU 246 -45.442 30.982 82.205 1.00 1.00 ATOM 984 O LEU 246 -44.406 30.337 82.340 1.00 1.00 ATOM 985 N ARG 247 -45.555 31.982 81.304 1.00 1.00 ATOM 986 CA ARG 247 -44.427 32.254 80.461 1.00 1.00 ATOM 987 C ARG 247 -44.115 33.717 80.500 1.00 1.00 ATOM 988 O ARG 247 -45.027 34.542 80.531 1.00 1.00 ATOM 989 N VAL 248 -42.803 34.033 80.491 1.00 1.00 ATOM 990 CA VAL 248 -42.297 35.374 80.567 1.00 1.00 ATOM 991 C VAL 248 -42.660 36.168 79.354 1.00 1.00 ATOM 992 O VAL 248 -43.186 37.271 79.474 1.00 1.00 ATOM 993 N TYR 249 -42.397 35.629 78.152 1.00 1.00 ATOM 994 CA TYR 249 -42.681 36.320 76.924 1.00 1.00 ATOM 995 C TYR 249 -42.165 37.735 76.970 1.00 1.00 ATOM 996 O TYR 249 -42.928 38.675 76.761 1.00 1.00 ATOM 997 N GLY 250 -40.855 37.920 77.239 1.00 1.00 ATOM 998 CA GLY 250 -40.271 39.234 77.178 1.00 1.00 ATOM 999 C GLY 250 -40.740 40.100 78.306 1.00 1.00 ATOM 1000 O GLY 250 -41.055 41.270 78.094 1.00 1.00 ATOM 1001 N MET 251 -40.800 39.565 79.538 1.00 1.00 ATOM 1002 CA MET 251 -41.241 40.395 80.623 1.00 1.00 ATOM 1003 C MET 251 -40.247 40.264 81.737 1.00 1.00 ATOM 1004 O MET 251 -39.163 39.720 81.538 1.00 1.00 ATOM 1005 N THR 252 -40.618 40.764 82.932 1.00 1.00 ATOM 1006 CA THR 252 -39.770 40.746 84.087 1.00 1.00 ATOM 1007 C THR 252 -39.700 39.346 84.594 1.00 1.00 ATOM 1008 O THR 252 -40.548 38.524 84.254 1.00 1.00 ATOM 1009 N PRO 253 -38.696 39.121 85.395 1.00 1.00 ATOM 1010 CA PRO 253 -38.452 37.829 85.972 1.00 1.00 ATOM 1011 C PRO 253 -39.437 37.267 86.952 1.00 1.00 ATOM 1012 O PRO 253 -39.604 36.053 87.029 1.00 1.00 ATOM 1013 N THR 254 -40.154 38.080 87.753 1.00 1.00 ATOM 1014 CA THR 254 -41.005 37.437 88.717 1.00 1.00 ATOM 1015 C THR 254 -42.430 37.630 88.320 1.00 1.00 ATOM 1016 O THR 254 -42.820 38.732 87.939 1.00 1.00 ATOM 1017 N GLU 255 -43.233 36.549 88.411 1.00 1.00 ATOM 1018 CA GLU 255 -44.617 36.636 88.047 1.00 1.00 ATOM 1019 C GLU 255 -45.382 37.142 89.217 1.00 1.00 ATOM 1020 O GLU 255 -44.937 36.999 90.354 1.00 1.00 ATOM 1021 N TYR 256 -46.559 37.737 88.945 1.00 1.00 ATOM 1022 CA TYR 256 -47.355 38.249 90.017 1.00 1.00 ATOM 1023 C TYR 256 -48.266 37.156 90.454 1.00 1.00 ATOM 1024 O TYR 256 -48.973 36.577 89.632 1.00 1.00 ATOM 1025 N LEU 257 -48.238 36.896 91.768 1.00 1.00 ATOM 1026 CA LEU 257 -48.968 35.833 92.383 1.00 1.00 ATOM 1027 C LEU 257 -50.434 36.102 92.215 1.00 1.00 ATOM 1028 O LEU 257 -51.176 35.222 91.786 1.00 1.00 ATOM 1029 N ALA 258 -50.871 37.332 92.549 1.00 1.00 ATOM 1030 CA ALA 258 -52.264 37.673 92.493 1.00 1.00 ATOM 1031 C ALA 258 -52.771 37.662 91.085 1.00 1.00 ATOM 1032 O ALA 258 -53.860 37.152 90.825 1.00 1.00 ATOM 1033 N PRO 259 -52.032 38.196 90.153 1.00 1.00 ATOM 1034 CA PRO 259 -52.538 38.238 88.811 1.00 1.00 ATOM 1035 C PRO 259 -52.699 36.880 88.217 1.00 1.00 ATOM 1036 O PRO 259 -53.563 36.677 87.368 1.00 1.00 ATOM 1037 N MET 260 -51.879 35.906 88.648 1.00 1.00 ATOM 1038 CA MET 260 -51.998 34.591 88.098 1.00 1.00 ATOM 1039 C MET 260 -53.339 34.059 88.481 1.00 1.00 ATOM 1040 O MET 260 -54.019 33.451 87.657 1.00 1.00 ATOM 1041 N ASN 261 -53.739 34.288 89.746 1.00 1.00 ATOM 1042 CA ASN 261 -54.990 33.785 90.229 1.00 1.00 ATOM 1043 C ASN 261 -56.107 34.422 89.466 1.00 1.00 ATOM 1044 O ASN 261 -57.047 33.740 89.064 1.00 1.00 ATOM 1045 N THR 262 -56.028 35.748 89.240 1.00 1.00 ATOM 1046 CA THR 262 -57.109 36.442 88.598 1.00 1.00 ATOM 1047 C THR 262 -57.304 35.926 87.207 1.00 1.00 ATOM 1048 O THR 262 -58.430 35.648 86.805 1.00 1.00 ATOM 1049 N VAL 263 -56.205 35.783 86.446 1.00 1.00 ATOM 1050 CA VAL 263 -56.303 35.335 85.085 1.00 1.00 ATOM 1051 C VAL 263 -56.814 33.928 85.049 1.00 1.00 ATOM 1052 O VAL 263 -57.693 33.612 84.251 1.00 1.00 ATOM 1053 N PHE 264 -56.271 33.065 85.922 1.00 1.00 ATOM 1054 CA PHE 264 -56.601 31.669 85.955 1.00 1.00 ATOM 1055 C PHE 264 -58.057 31.505 86.248 1.00 1.00 ATOM 1056 O PHE 264 -58.744 30.754 85.559 1.00 1.00 ATOM 1057 N ASN 265 -58.551 32.213 87.279 1.00 1.00 ATOM 1058 CA ASN 265 -59.915 32.069 87.687 1.00 1.00 ATOM 1059 C ASN 265 -60.831 32.559 86.611 1.00 1.00 ATOM 1060 O ASN 265 -61.862 31.943 86.351 1.00 1.00 ATOM 1061 N GLU 266 -60.479 33.677 85.953 1.00 1.00 ATOM 1062 CA GLU 266 -61.380 34.219 84.979 1.00 1.00 ATOM 1063 C GLU 266 -61.595 33.199 83.908 1.00 1.00 ATOM 1064 O GLU 266 -62.733 32.935 83.528 1.00 1.00 ATOM 1065 N TRP 267 -60.501 32.606 83.410 1.00 1.00 ATOM 1066 CA TRP 267 -60.611 31.653 82.353 1.00 1.00 ATOM 1067 C TRP 267 -61.132 30.324 82.782 1.00 1.00 ATOM 1068 O TRP 267 -61.602 29.548 81.953 1.00 1.00 ATOM 1069 N GLU 268 -61.077 30.013 84.089 1.00 1.00 ATOM 1070 CA GLU 268 -61.586 28.749 84.535 1.00 1.00 ATOM 1071 C GLU 268 -63.024 28.700 84.131 1.00 1.00 ATOM 1072 O GLU 268 -63.565 27.619 83.912 1.00 1.00 ATOM 1073 N LYS 269 -63.666 29.873 84.014 1.00 1.00 ATOM 1074 CA LYS 269 -65.043 29.891 83.616 1.00 1.00 ATOM 1075 C LYS 269 -65.140 29.194 82.289 1.00 1.00 ATOM 1076 O LYS 269 -66.097 28.463 82.046 1.00 1.00 ATOM 1077 N SER 270 -64.147 29.397 81.399 1.00 1.00 ATOM 1078 CA SER 270 -64.134 28.755 80.108 1.00 1.00 ATOM 1079 C SER 270 -63.612 27.346 80.274 1.00 1.00 ATOM 1080 O SER 270 -63.160 26.980 81.356 1.00 1.00 ATOM 1081 N GLU 271 -63.661 26.524 79.189 1.00 1.00 ATOM 1082 CA GLU 271 -63.226 25.147 79.168 1.00 1.00 ATOM 1083 C GLU 271 -61.748 25.091 79.394 1.00 1.00 ATOM 1084 O GLU 271 -61.256 24.160 80.028 1.00 1.00 ATOM 1085 N ALA 272 -61.011 26.085 78.888 1.00 1.00 ATOM 1086 CA ALA 272 -59.600 26.149 79.120 1.00 1.00 ATOM 1087 C ALA 272 -59.224 27.478 78.576 1.00 1.00 ATOM 1088 O ALA 272 -59.971 28.057 77.790 1.00 1.00 ATOM 1089 N ALA 273 -58.055 28.027 78.952 1.00 1.00 ATOM 1090 CA ALA 273 -57.791 29.314 78.390 1.00 1.00 ATOM 1091 C ALA 273 -56.464 29.813 78.858 1.00 1.00 ATOM 1092 O ALA 273 -55.897 29.263 79.798 1.00 1.00 ATOM 1093 N ALA 274 -55.969 30.878 78.192 1.00 1.00 ATOM 1094 CA ALA 274 -54.731 31.499 78.566 1.00 1.00 ATOM 1095 C ALA 274 -54.960 32.976 78.523 1.00 1.00 ATOM 1096 O ALA 274 -55.667 33.464 77.644 1.00 1.00 ATOM 1097 N VAL 275 -54.362 33.726 79.471 1.00 1.00 ATOM 1098 CA VAL 275 -54.547 35.151 79.500 1.00 1.00 ATOM 1099 C VAL 275 -53.351 35.755 80.166 1.00 1.00 ATOM 1100 O VAL 275 -52.642 35.070 80.899 1.00 1.00 ATOM 1101 N THR 276 -53.122 37.058 79.918 1.00 1.00 ATOM 1102 CA THR 276 -52.068 37.753 80.583 1.00 1.00 ATOM 1103 C THR 276 -52.709 38.860 81.341 1.00 1.00 ATOM 1104 O THR 276 -53.549 39.574 80.797 1.00 1.00 ATOM 1105 N PRO 277 -52.342 39.034 82.575 1.00 1.00 ATOM 1106 CA PRO 277 -52.797 40.175 83.305 1.00 1.00 ATOM 1107 C PRO 277 -52.062 41.312 82.689 1.00 1.00 ATOM 1108 O PRO 277 -52.588 42.421 82.619 1.00 1.00 ATOM 1109 N ASP 278 -50.825 41.027 82.229 1.00 1.00 ATOM 1110 CA ASP 278 -49.969 41.976 81.589 1.00 1.00 ATOM 1111 C ASP 278 -48.555 41.468 81.696 1.00 1.00 ATOM 1112 O ASP 278 -47.928 41.605 82.744 1.00 1.00 ATOM 1113 N GLY 279 -48.030 40.876 80.602 1.00 1.00 ATOM 1114 CA GLY 279 -46.660 40.443 80.577 1.00 1.00 ATOM 1115 C GLY 279 -46.546 38.990 80.937 1.00 1.00 ATOM 1116 O GLY 279 -45.532 38.361 80.644 1.00 1.00 ATOM 1117 N TYR 280 -47.576 38.401 81.577 1.00 1.00 ATOM 1118 CA TYR 280 -47.478 37.014 81.944 1.00 1.00 ATOM 1119 C TYR 280 -48.491 36.202 81.209 1.00 1.00 ATOM 1120 O TYR 280 -49.658 36.582 81.147 1.00 1.00 ATOM 1121 N ARG 281 -47.998 35.077 80.666 1.00 1.00 ATOM 1122 CA ARG 281 -48.642 34.142 79.790 1.00 1.00 ATOM 1123 C ARG 281 -49.705 33.261 80.393 1.00 1.00 ATOM 1124 O ARG 281 -50.597 32.798 79.685 1.00 1.00 ATOM 1125 N VAL 282 -49.695 32.976 81.717 1.00 1.00 ATOM 1126 CA VAL 282 -50.517 32.026 82.459 1.00 1.00 ATOM 1127 C VAL 282 -51.572 31.302 81.652 1.00 1.00 ATOM 1128 O VAL 282 -52.431 31.940 81.049 1.00 1.00 ATOM 1129 N TYR 283 -51.496 29.942 81.658 1.00 1.00 ATOM 1130 CA TYR 283 -52.412 29.085 80.944 1.00 1.00 ATOM 1131 C TYR 283 -52.974 28.071 81.894 1.00 1.00 ATOM 1132 O TYR 283 -52.267 27.605 82.786 1.00 1.00 ATOM 1133 N ILE 284 -54.261 27.717 81.699 1.00 1.00 ATOM 1134 CA ILE 284 -54.829 26.587 82.374 1.00 1.00 ATOM 1135 C ILE 284 -55.403 25.744 81.280 1.00 1.00 ATOM 1136 O ILE 284 -56.299 26.188 80.565 1.00 1.00 ATOM 1137 N ASN 285 -54.907 24.504 81.126 1.00 1.00 ATOM 1138 CA ASN 285 -55.453 23.717 80.062 1.00 1.00 ATOM 1139 C ASN 285 -55.748 22.361 80.596 1.00 1.00 ATOM 1140 O ASN 285 -54.930 21.793 81.317 1.00 1.00 ATOM 1141 N ALA 286 -56.926 21.809 80.246 1.00 1.00 ATOM 1142 CA ALA 286 -57.238 20.472 80.654 1.00 1.00 ATOM 1143 C ALA 286 -57.142 19.644 79.416 1.00 1.00 ATOM 1144 O ALA 286 -57.726 19.994 78.392 1.00 1.00 ATOM 1145 N VAL 287 -56.408 18.518 79.475 1.00 1.00 ATOM 1146 CA VAL 287 -56.255 17.691 78.313 1.00 1.00 ATOM 1147 C VAL 287 -56.443 16.270 78.746 1.00 1.00 ATOM 1148 O VAL 287 -56.345 15.970 79.933 1.00 1.00 ATOM 1149 N ASP 288 -56.713 15.363 77.792 1.00 1.00 ATOM 1150 CA ASP 288 -56.925 14.000 78.173 1.00 1.00 ATOM 1151 C ASP 288 -55.641 13.265 77.966 1.00 1.00 ATOM 1152 O ASP 288 -55.304 12.919 76.836 1.00 1.00 ATOM 1153 N LYS 289 -54.905 13.010 79.062 1.00 1.00 ATOM 1154 CA LYS 289 -53.687 12.264 78.966 1.00 1.00 ATOM 1155 C LYS 289 -53.335 11.837 80.344 1.00 1.00 ATOM 1156 O LYS 289 -54.151 11.956 81.254 1.00 1.00 ATOM 1157 N THR 290 -52.098 11.334 80.524 1.00 1.00 ATOM 1158 CA THR 290 -51.701 10.907 81.830 1.00 1.00 ATOM 1159 C THR 290 -50.370 11.505 82.156 1.00 1.00 ATOM 1160 O THR 290 -49.748 12.129 81.299 1.00 1.00 ATOM 1161 N ASP 291 -49.946 11.291 83.417 1.00 1.00 ATOM 1162 CA ASP 291 -48.697 11.716 83.982 1.00 1.00 ATOM 1163 C ASP 291 -47.600 10.999 83.266 1.00 1.00 ATOM 1164 O ASP 291 -46.550 11.582 83.006 1.00 1.00 ATOM 1165 N LEU 292 -47.852 9.718 82.938 1.00 1.00 ATOM 1166 CA LEU 292 -46.887 8.818 82.377 1.00 1.00 ATOM 1167 C LEU 292 -46.409 9.275 81.033 1.00 1.00 ATOM 1168 O LEU 292 -45.228 9.142 80.720 1.00 1.00 ATOM 1169 N THR 293 -47.300 9.836 80.192 1.00 1.00 ATOM 1170 CA THR 293 -46.902 10.194 78.859 1.00 1.00 ATOM 1171 C THR 293 -45.742 11.133 78.933 1.00 1.00 ATOM 1172 O THR 293 -45.755 12.065 79.734 1.00 1.00 ATOM 1173 N GLY 294 -44.731 10.886 78.079 1.00 1.00 ATOM 1174 CA GLY 294 -43.553 11.698 78.081 1.00 1.00 ATOM 1175 C GLY 294 -43.950 13.082 77.707 1.00 1.00 ATOM 1176 O GLY 294 -43.489 14.042 78.318 1.00 1.00 ATOM 1177 N ILE 295 -44.823 13.205 76.692 1.00 1.00 ATOM 1178 CA ILE 295 -45.243 14.512 76.291 1.00 1.00 ATOM 1179 C ILE 295 -46.399 14.893 77.204 1.00 1.00 ATOM 1180 O ILE 295 -46.777 14.095 78.080 1.00 1.00 TER END