####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 58 ( 342), selected 58 , name T1019s1TS023_4 # Molecule2: number of CA atoms 58 ( 429), selected 58 , name T1019s1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1019s1TS023_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 2 - 33 4.95 8.65 LCS_AVERAGE: 47.35 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 43 - 58 1.47 11.22 LCS_AVERAGE: 20.72 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 44 - 58 0.86 11.61 LCS_AVERAGE: 16.53 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 58 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 1 G 1 3 11 30 3 5 6 9 16 17 18 22 25 28 32 35 36 38 40 41 43 45 47 48 LCS_GDT S 2 S 2 10 11 32 5 9 10 13 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT Y 3 Y 3 10 11 32 7 9 10 13 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT P 4 P 4 10 11 32 7 9 10 13 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT C 5 C 5 10 11 32 7 9 10 13 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT P 6 P 6 10 11 32 7 9 10 13 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT C 7 C 7 10 11 32 7 9 10 13 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT C 8 C 8 10 11 32 7 9 10 13 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT G 9 G 9 10 11 32 6 9 10 13 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT N 10 N 10 10 11 32 7 9 10 13 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT K 11 K 11 10 11 32 6 9 10 12 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT T 12 T 12 4 11 32 3 12 15 15 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT I 13 I 13 4 6 32 3 4 4 5 12 15 16 19 26 29 31 33 36 38 40 41 43 45 47 48 LCS_GDT D 14 D 14 4 6 32 3 4 4 5 9 13 16 19 25 29 31 32 34 38 40 41 43 45 47 48 LCS_GDT E 15 E 15 4 6 32 2 4 4 5 8 11 14 17 18 20 22 24 27 31 35 38 39 41 44 47 LCS_GDT P 16 P 16 5 8 32 3 4 5 5 6 7 8 10 12 14 18 21 23 26 28 33 37 39 42 43 LCS_GDT G 17 G 17 5 8 32 3 4 5 6 7 10 13 16 18 19 21 23 24 27 29 34 37 39 42 43 LCS_GDT C 18 C 18 6 11 32 3 5 6 9 10 13 16 19 20 23 26 31 35 38 40 41 43 45 47 47 LCS_GDT Y 19 Y 19 8 11 32 4 6 8 9 10 14 15 15 20 22 22 28 35 38 40 41 43 45 47 48 LCS_GDT E 20 E 20 8 11 32 4 6 8 9 11 14 16 20 26 29 32 34 36 38 40 41 43 45 47 48 LCS_GDT I 21 I 21 8 11 32 4 6 8 9 11 16 19 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT C 22 C 22 8 11 32 4 6 8 9 12 17 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT P 23 P 23 8 11 32 4 6 8 9 16 17 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT I 24 I 24 8 11 32 4 6 8 9 11 14 20 24 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT C 25 C 25 8 11 32 4 6 8 12 13 14 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT G 26 G 26 8 11 32 3 6 8 11 13 15 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT W 27 W 27 5 11 32 3 5 10 14 15 16 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT E 28 E 28 5 11 32 3 4 6 9 13 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT D 29 D 29 4 5 32 3 4 5 7 7 11 19 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT D 30 D 30 4 5 32 3 6 10 13 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT P 31 P 31 4 12 32 3 5 10 13 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT V 32 V 32 10 12 32 5 9 10 13 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT Q 33 Q 33 10 12 32 5 9 10 10 11 13 20 23 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT S 34 S 34 10 12 23 5 9 10 10 11 11 13 14 15 17 23 32 34 35 39 40 43 44 47 47 LCS_GDT A 35 A 35 10 12 23 5 9 10 10 11 11 13 18 18 21 28 33 36 38 40 41 43 45 47 47 LCS_GDT D 36 D 36 10 12 23 5 9 10 10 11 12 14 22 25 29 32 35 36 38 40 41 43 45 47 47 LCS_GDT P 37 P 37 10 12 23 5 9 10 10 11 11 14 16 22 28 29 35 36 38 40 41 43 45 47 47 LCS_GDT D 38 D 38 10 12 23 5 9 10 10 11 13 16 22 26 29 32 35 36 38 40 41 43 45 47 47 LCS_GDT F 39 F 39 10 12 23 3 9 10 13 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT S 40 S 40 10 12 23 3 9 10 12 13 14 19 23 26 29 31 33 34 38 40 41 43 45 47 48 LCS_GDT G 41 G 41 10 12 21 4 6 10 10 13 15 17 22 24 26 30 33 34 38 40 41 43 45 46 48 LCS_GDT G 42 G 42 5 12 21 4 4 5 9 11 11 13 18 21 26 30 33 34 38 40 41 43 45 46 48 LCS_GDT A 43 A 43 5 16 21 4 4 5 6 10 16 17 18 21 26 30 33 34 36 38 41 43 45 46 48 LCS_GDT N 44 N 44 15 16 21 4 6 13 15 16 17 18 19 24 26 30 33 34 35 38 38 40 42 46 48 LCS_GDT S 45 S 45 15 16 21 4 12 15 15 16 17 18 22 24 26 30 33 34 36 38 39 42 44 46 48 LCS_GDT P 46 P 46 15 16 21 9 12 15 15 16 17 18 22 24 29 31 33 34 38 40 41 43 45 47 48 LCS_GDT S 47 S 47 15 16 21 4 10 15 15 16 17 18 22 24 26 30 33 34 38 40 41 43 45 47 48 LCS_GDT L 48 L 48 15 16 21 4 10 15 15 16 17 18 22 24 26 30 33 34 38 40 41 43 45 47 48 LCS_GDT N 49 N 49 15 16 21 9 12 15 15 16 17 18 22 24 26 30 33 34 38 40 41 43 45 47 48 LCS_GDT E 50 E 50 15 16 21 9 12 15 15 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT A 51 A 51 15 16 21 9 12 15 15 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 LCS_GDT K 52 K 52 15 16 21 9 12 15 15 16 17 18 22 24 28 32 35 36 38 40 41 43 45 47 48 LCS_GDT R 53 R 53 15 16 21 9 12 15 15 16 17 18 22 24 27 30 35 36 38 40 41 43 45 47 48 LCS_GDT A 54 A 54 15 16 21 9 12 15 15 16 17 18 22 24 27 30 35 36 38 40 41 43 45 47 48 LCS_GDT F 55 F 55 15 16 21 9 12 15 15 16 17 18 22 24 26 30 35 36 38 40 41 43 45 47 48 LCS_GDT N 56 N 56 15 16 21 9 12 15 15 16 17 18 22 24 26 30 33 34 36 39 41 43 45 46 48 LCS_GDT E 57 E 57 15 16 21 9 12 15 15 16 17 18 22 24 26 30 33 34 36 38 38 40 42 45 48 LCS_GDT Q 58 Q 58 15 16 21 9 12 15 15 16 17 18 22 24 26 30 33 34 36 38 38 40 42 45 48 LCS_AVERAGE LCS_A: 28.20 ( 16.53 20.72 47.35 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 12 15 15 16 18 22 25 27 29 32 35 36 38 40 41 43 45 47 48 GDT PERCENT_AT 15.52 20.69 25.86 25.86 27.59 31.03 37.93 43.10 46.55 50.00 55.17 60.34 62.07 65.52 68.97 70.69 74.14 77.59 81.03 82.76 GDT RMS_LOCAL 0.35 0.43 0.79 0.79 0.96 1.86 2.37 2.63 2.80 3.10 3.52 4.06 4.08 4.32 4.70 4.75 4.97 5.31 5.56 6.18 GDT RMS_ALL_AT 11.75 11.88 11.79 11.79 11.81 8.11 8.18 8.15 8.16 8.13 8.18 8.27 8.26 8.26 8.18 8.21 8.28 8.01 8.04 8.35 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA G 1 G 1 5.963 0 0.678 0.678 6.484 1.364 1.364 - LGA S 2 S 2 1.649 1 0.578 0.570 2.656 55.000 41.212 - LGA Y 3 Y 3 1.340 7 0.218 0.252 2.293 58.636 25.000 - LGA P 4 P 4 0.596 2 0.025 0.037 1.327 82.273 56.364 - LGA C 5 C 5 1.069 1 0.027 0.060 1.138 73.636 60.000 - LGA P 6 P 6 2.082 2 0.031 0.033 2.635 38.636 25.974 - LGA C 7 C 7 1.921 1 0.230 0.222 2.047 54.545 42.727 - LGA C 8 C 8 0.300 1 0.074 0.109 1.450 82.273 65.758 - LGA G 9 G 9 1.456 0 0.127 0.127 2.258 62.727 62.727 - LGA N 10 N 10 1.448 3 0.048 0.060 1.902 62.273 39.318 - LGA K 11 K 11 2.908 4 0.147 0.158 3.771 42.273 20.000 - LGA T 12 T 12 2.835 2 0.661 0.617 3.427 30.909 20.260 - LGA I 13 I 13 6.548 3 0.031 0.033 9.043 0.000 0.000 - LGA D 14 D 14 8.924 3 0.511 0.528 10.577 0.000 0.000 - LGA E 15 E 15 14.249 4 0.480 0.456 15.949 0.000 0.000 - LGA P 16 P 16 15.832 2 0.642 0.575 16.639 0.000 0.000 - LGA G 17 G 17 15.816 0 0.093 0.093 15.816 0.000 0.000 - LGA C 18 C 18 10.408 1 0.547 0.539 12.249 0.000 0.000 - LGA Y 19 Y 19 9.400 7 0.548 0.527 9.888 0.000 0.000 - LGA E 20 E 20 5.621 4 0.018 0.020 7.082 0.000 0.000 - LGA I 21 I 21 3.938 3 0.086 0.101 4.034 14.545 7.955 - LGA C 22 C 22 3.232 1 0.084 0.106 3.485 25.455 20.000 - LGA P 23 P 23 3.623 2 0.035 0.038 4.864 9.545 5.714 - LGA I 24 I 24 4.465 3 0.068 0.070 4.989 5.909 3.182 - LGA C 25 C 25 3.604 1 0.590 0.530 4.716 10.455 10.000 - LGA G 26 G 26 3.731 0 0.485 0.485 3.731 12.727 12.727 - LGA W 27 W 27 3.752 9 0.512 0.490 5.152 8.182 3.117 - LGA E 28 E 28 3.416 4 0.649 0.583 4.850 16.364 7.475 - LGA D 29 D 29 4.243 3 0.439 0.398 6.353 17.273 8.636 - LGA D 30 D 30 1.831 3 0.151 0.158 2.357 47.727 30.227 - LGA P 31 P 31 1.637 2 0.082 0.084 1.987 58.182 40.519 - LGA V 32 V 32 1.040 2 0.579 0.575 3.112 60.000 36.883 - LGA Q 33 Q 33 4.815 4 0.022 0.022 8.030 5.000 2.222 - LGA S 34 S 34 9.937 1 0.012 0.022 12.301 0.000 0.000 - LGA A 35 A 35 9.647 0 0.025 0.025 12.064 0.000 0.000 - LGA D 36 D 36 7.999 3 0.102 0.105 7.999 0.455 0.227 - LGA P 37 P 37 9.329 2 0.132 0.142 12.393 0.000 0.000 - LGA D 38 D 38 6.925 3 0.203 0.212 8.782 9.545 4.773 - LGA F 39 F 39 1.755 6 0.058 0.063 3.588 35.909 14.050 - LGA S 40 S 40 6.109 1 0.674 0.619 8.809 4.545 3.030 - LGA G 41 G 41 11.724 0 0.136 0.136 13.501 0.000 0.000 - LGA G 42 G 42 9.753 0 0.044 0.044 11.327 0.000 0.000 - LGA A 43 A 43 11.826 0 0.028 0.036 13.433 0.000 0.000 - LGA N 44 N 44 13.457 3 0.653 0.597 13.533 0.000 0.000 - LGA S 45 S 45 12.292 1 0.024 0.034 12.809 0.000 0.000 - LGA P 46 P 46 7.015 2 0.056 0.071 8.798 0.000 0.000 - LGA S 47 S 47 8.215 1 0.042 0.063 9.433 0.455 0.303 - LGA L 48 L 48 7.343 3 0.006 0.008 9.201 0.000 0.000 - LGA N 49 N 49 8.554 3 0.073 0.072 9.869 0.000 0.000 - LGA E 50 E 50 3.553 4 0.011 0.018 5.287 10.909 7.879 - LGA A 51 A 51 2.444 0 0.013 0.016 5.485 20.455 26.545 - LGA K 52 K 52 7.305 4 0.043 0.042 10.086 0.000 0.000 - LGA R 53 R 53 10.037 6 0.028 0.037 12.180 0.000 0.000 - LGA A 54 A 54 9.865 0 0.042 0.045 12.647 0.000 0.000 - LGA F 55 F 55 10.082 6 0.013 0.019 13.431 0.000 0.000 - LGA N 56 N 56 14.541 3 0.121 0.127 18.202 0.000 0.000 - LGA E 57 E 57 17.340 4 0.029 0.038 20.022 0.000 0.000 - LGA Q 58 Q 58 17.452 4 0.047 0.049 19.434 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 58 232 232 100.00 429 284 66.20 58 0 SUMMARY(RMSD_GDC): 7.698 7.737 7.765 17.555 12.175 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 58 58 4.0 25 2.63 40.086 35.836 0.915 LGA_LOCAL RMSD: 2.633 Number of atoms: 25 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.150 Number of assigned atoms: 58 Std_ASGN_ATOMS RMSD: 7.698 Standard rmsd on all 58 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.227613 * X + 0.618637 * Y + -0.751985 * Z + 8.866916 Y_new = 0.705612 * X + 0.636974 * Y + 0.310444 * Z + -5.152147 Z_new = 0.671047 * X + -0.459949 * Y + -0.581501 * Z + 28.989597 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.882833 -0.735620 -2.472383 [DEG: 107.8784 -42.1479 -141.6571 ] ZXZ: -1.962316 2.191369 2.171669 [DEG: -112.4324 125.5562 124.4275 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1019s1TS023_4 REMARK 2: T1019s1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1019s1TS023_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 58 58 4.0 25 2.63 35.836 7.70 REMARK ---------------------------------------------------------- MOLECULE T1019s1TS023_4 PFRMAT TS TARGET T1019s1 MODEL 4 PARENT N/A ATOM 1 N GLY 1 8.867 -5.152 28.990 1.00 4.20 ATOM 2 CA GLY 1 8.535 -4.123 29.968 1.00 4.20 ATOM 3 C GLY 1 9.288 -2.830 29.685 1.00 4.20 ATOM 4 O GLY 1 9.755 -2.604 28.568 1.00 4.20 ATOM 5 CEN GLY 1 8.535 -4.123 29.968 1.00 4.20 ATOM 7 N SER 2 9.403 -1.983 30.702 1.00 4.02 ATOM 8 CA SER 2 9.971 -0.651 30.529 1.00 4.02 ATOM 9 C SER 2 11.472 -0.721 30.279 1.00 4.02 ATOM 10 O SER 2 12.163 -1.580 30.825 1.00 4.02 ATOM 11 CB SER 2 9.678 0.203 31.748 1.00 4.02 ATOM 12 CEN SER 2 9.597 0.333 32.269 1.00 4.02 ATOM 14 N TYR 3 11.971 0.190 29.451 1.00 4.12 ATOM 15 CA TYR 3 13.408 0.343 29.255 1.00 4.12 ATOM 16 C TYR 3 13.869 1.743 29.639 1.00 4.12 ATOM 17 O TYR 3 13.752 2.684 28.854 1.00 4.12 ATOM 18 CB TYR 3 13.786 0.046 27.803 1.00 4.12 ATOM 19 CEN TYR 3 14.455 -1.241 26.820 1.00 4.12 ATOM 21 N PRO 4 14.395 1.875 30.853 1.00 3.63 ATOM 22 CA PRO 4 14.666 3.186 31.431 1.00 3.63 ATOM 23 C PRO 4 15.598 3.999 30.541 1.00 3.63 ATOM 24 O PRO 4 16.540 3.462 29.959 1.00 3.63 ATOM 25 CB PRO 4 15.300 2.870 32.796 1.00 3.63 ATOM 26 CEN PRO 4 15.129 1.174 32.269 1.00 3.63 ATOM 27 N CYS 5 15.329 5.296 30.440 1.00 3.53 ATOM 28 CA CYS 5 16.213 6.209 29.724 1.00 3.53 ATOM 29 C CYS 5 17.582 6.282 30.387 1.00 3.53 ATOM 30 O CYS 5 17.686 6.376 31.610 1.00 3.53 ATOM 31 CB CYS 5 15.484 7.547 29.844 1.00 3.53 ATOM 32 CEN CYS 5 14.992 8.095 29.130 1.00 3.53 ATOM 34 N PRO 6 18.631 6.238 29.573 1.00 3.72 ATOM 35 CA PRO 6 19.990 6.090 30.082 1.00 3.72 ATOM 36 C PRO 6 20.436 7.341 30.829 1.00 3.72 ATOM 37 O PRO 6 21.365 7.294 31.635 1.00 3.72 ATOM 38 CB PRO 6 20.836 5.835 28.824 1.00 3.72 ATOM 39 CEN PRO 6 19.283 6.045 27.969 1.00 3.72 ATOM 40 N CYS 7 19.771 8.457 30.556 1.00 3.68 ATOM 41 CA CYS 7 20.196 9.750 31.076 1.00 3.68 ATOM 42 C CYS 7 19.358 10.162 32.280 1.00 3.68 ATOM 43 O CYS 7 19.805 10.938 33.124 1.00 3.68 ATOM 44 CB CYS 7 19.942 10.690 29.897 1.00 3.68 ATOM 45 CEN CYS 7 20.609 11.165 29.278 1.00 3.68 ATOM 47 N CYS 8 18.139 9.638 32.353 1.00 3.59 ATOM 48 CA CYS 8 17.128 10.173 33.257 1.00 3.59 ATOM 49 C CYS 8 16.775 9.169 34.346 1.00 3.59 ATOM 50 O CYS 8 16.372 9.548 35.446 1.00 3.59 ATOM 51 CB CYS 8 15.934 10.403 32.330 1.00 3.59 ATOM 52 CEN CYS 8 15.524 11.279 31.989 1.00 3.59 ATOM 54 N GLY 9 16.931 7.887 34.035 1.00 3.60 ATOM 55 CA GLY 9 16.704 6.828 35.010 1.00 3.60 ATOM 56 C GLY 9 15.216 6.631 35.274 1.00 3.60 ATOM 57 O GLY 9 14.828 6.000 36.257 1.00 3.60 ATOM 58 CEN GLY 9 16.704 6.828 35.011 1.00 3.60 ATOM 60 N ASN 10 14.387 7.173 34.388 1.00 3.26 ATOM 61 CA ASN 10 12.943 7.003 34.486 1.00 3.26 ATOM 62 C ASN 10 12.352 6.539 33.160 1.00 3.26 ATOM 63 O ASN 10 12.699 7.060 32.100 1.00 3.26 ATOM 64 CB ASN 10 12.262 8.278 34.947 1.00 3.26 ATOM 65 CEN ASN 10 11.954 8.718 35.849 1.00 3.26 ATOM 67 N LYS 11 11.457 5.560 33.226 1.00 3.45 ATOM 68 CA LYS 11 10.627 5.202 32.083 1.00 3.45 ATOM 69 C LYS 11 9.149 5.211 32.451 1.00 3.45 ATOM 70 O LYS 11 8.699 4.407 33.269 1.00 3.45 ATOM 71 CB LYS 11 11.025 3.828 31.540 1.00 3.45 ATOM 72 CEN LYS 11 12.012 2.684 30.059 1.00 3.45 ATOM 74 N THR 12 8.399 6.124 31.844 1.00 3.83 ATOM 75 CA THR 12 6.971 6.249 32.119 1.00 3.83 ATOM 76 C THR 12 6.141 5.565 31.041 1.00 3.83 ATOM 77 O THR 12 6.537 5.518 29.875 1.00 3.83 ATOM 78 CB THR 12 6.543 7.724 32.224 1.00 3.83 ATOM 79 CEN THR 12 6.579 8.253 32.469 1.00 3.83 ATOM 81 N ILE 13 4.989 5.035 31.435 1.00 4.00 ATOM 82 CA ILE 13 4.084 4.382 30.497 1.00 4.00 ATOM 83 C ILE 13 2.722 5.063 30.480 1.00 4.00 ATOM 84 O ILE 13 2.226 5.507 31.516 1.00 4.00 ATOM 85 CB ILE 13 3.898 2.892 30.835 1.00 4.00 ATOM 86 CEN ILE 13 4.303 1.888 30.701 1.00 4.00 ATOM 88 N ASP 14 2.121 5.145 29.298 1.00 3.92 ATOM 89 CA ASP 14 0.749 5.620 29.167 1.00 3.92 ATOM 90 C ASP 14 -0.244 4.469 29.263 1.00 3.92 ATOM 91 O ASP 14 0.147 3.306 29.371 1.00 3.92 ATOM 92 CB ASP 14 0.563 6.365 27.843 1.00 3.92 ATOM 93 CEN ASP 14 0.548 7.314 27.472 1.00 3.92 ATOM 95 N GLU 15 -1.531 4.798 29.224 1.00 4.30 ATOM 96 CA GLU 15 -2.582 3.806 29.412 1.00 4.30 ATOM 97 C GLU 15 -2.967 3.154 28.091 1.00 4.30 ATOM 98 O GLU 15 -4.042 2.568 27.966 1.00 4.30 ATOM 99 CB GLU 15 -3.813 4.446 30.060 1.00 4.30 ATOM 100 CEN GLU 15 -4.755 4.764 31.443 1.00 4.30 ATOM 102 N PRO 16 -2.082 3.258 27.105 1.00 4.14 ATOM 103 CA PRO 16 -2.129 2.387 25.937 1.00 4.14 ATOM 104 C PRO 16 -1.151 1.227 26.076 1.00 4.14 ATOM 105 O PRO 16 -1.158 0.297 25.269 1.00 4.14 ATOM 106 CB PRO 16 -1.767 3.312 24.763 1.00 4.14 ATOM 107 CEN PRO 16 -1.579 4.544 26.041 1.00 4.14 ATOM 108 N GLY 17 -0.311 1.288 27.103 1.00 4.56 ATOM 109 CA GLY 17 0.699 0.260 27.329 1.00 4.56 ATOM 110 C GLY 17 2.031 0.650 26.705 1.00 4.56 ATOM 111 O GLY 17 2.996 -0.114 26.749 1.00 4.56 ATOM 112 CEN GLY 17 0.698 0.259 27.329 1.00 4.56 ATOM 114 N CYS 18 2.080 1.844 26.124 1.00 3.87 ATOM 115 CA CYS 18 3.268 2.304 25.414 1.00 3.87 ATOM 116 C CYS 18 4.338 2.785 26.385 1.00 3.87 ATOM 117 O CYS 18 4.029 3.266 27.476 1.00 3.87 ATOM 118 CB CYS 18 2.734 3.468 24.580 1.00 3.87 ATOM 119 CEN CYS 18 2.587 3.540 23.568 1.00 3.87 ATOM 121 N TYR 19 5.597 2.655 25.983 1.00 4.13 ATOM 122 CA TYR 19 6.704 3.247 26.725 1.00 4.13 ATOM 123 C TYR 19 6.700 4.766 26.602 1.00 4.13 ATOM 124 O TYR 19 6.587 5.309 25.504 1.00 4.13 ATOM 125 CB TYR 19 8.040 2.684 26.234 1.00 4.13 ATOM 126 CEN TYR 19 9.244 1.492 26.675 1.00 4.13 ATOM 128 N GLU 20 6.824 5.446 27.736 1.00 3.96 ATOM 129 CA GLU 20 6.943 6.899 27.749 1.00 3.96 ATOM 130 C GLU 20 8.333 7.335 28.195 1.00 3.96 ATOM 131 O GLU 20 8.924 6.733 29.092 1.00 3.96 ATOM 132 CB GLU 20 5.881 7.515 28.662 1.00 3.96 ATOM 133 CEN GLU 20 4.372 8.282 28.864 1.00 3.96 ATOM 135 N ILE 21 8.850 8.383 27.563 1.00 4.15 ATOM 136 CA ILE 21 10.177 8.894 27.886 1.00 4.15 ATOM 137 C ILE 21 10.147 9.749 29.145 1.00 4.15 ATOM 138 O ILE 21 9.183 10.473 29.393 1.00 4.15 ATOM 139 CB ILE 21 10.761 9.722 26.727 1.00 4.15 ATOM 140 CEN ILE 21 11.318 9.678 25.791 1.00 4.15 ATOM 142 N CYS 22 11.208 9.662 29.941 1.00 3.78 ATOM 143 CA CYS 22 11.306 10.430 31.175 1.00 3.78 ATOM 144 C CYS 22 11.289 11.927 30.895 1.00 3.78 ATOM 145 O CYS 22 11.807 12.383 29.876 1.00 3.78 ATOM 146 CB CYS 22 12.665 10.002 31.732 1.00 3.78 ATOM 147 CEN CYS 22 12.888 9.418 32.545 1.00 3.78 ATOM 149 N PRO 23 10.690 12.688 31.806 1.00 3.86 ATOM 150 CA PRO 23 10.389 14.092 31.554 1.00 3.86 ATOM 151 C PRO 23 11.664 14.917 31.439 1.00 3.86 ATOM 152 O PRO 23 11.632 16.072 31.015 1.00 3.86 ATOM 153 CB PRO 23 9.532 14.514 32.758 1.00 3.86 ATOM 154 CEN PRO 23 9.825 12.843 33.311 1.00 3.86 ATOM 155 N ILE 24 12.787 14.317 31.821 1.00 3.44 ATOM 156 CA ILE 24 14.076 14.995 31.762 1.00 3.44 ATOM 157 C ILE 24 14.839 14.620 30.498 1.00 3.44 ATOM 158 O ILE 24 15.138 15.475 29.665 1.00 3.44 ATOM 159 CB ILE 24 14.945 14.669 32.991 1.00 3.44 ATOM 160 CEN ILE 24 15.170 14.942 34.022 1.00 3.44 ATOM 162 N CYS 25 15.151 13.335 30.363 1.00 3.71 ATOM 163 CA CYS 25 15.873 12.842 29.195 1.00 3.71 ATOM 164 C CYS 25 14.930 12.168 28.208 1.00 3.71 ATOM 165 O CYS 25 14.329 11.138 28.512 1.00 3.71 ATOM 166 CB CYS 25 16.836 11.821 29.802 1.00 3.71 ATOM 167 CEN CYS 25 17.856 11.866 29.919 1.00 3.71 ATOM 169 N GLY 26 14.803 12.756 27.023 1.00 4.02 ATOM 170 CA GLY 26 14.000 12.168 25.958 1.00 4.02 ATOM 171 C GLY 26 14.861 11.801 24.756 1.00 4.02 ATOM 172 O GLY 26 15.122 12.634 23.889 1.00 4.02 ATOM 173 CEN GLY 26 14.000 12.167 25.958 1.00 4.02 ATOM 175 N TRP 27 15.300 10.547 24.711 1.00 5.21 ATOM 176 CA TRP 27 16.052 10.040 23.569 1.00 5.21 ATOM 177 C TRP 27 15.358 8.838 22.943 1.00 5.21 ATOM 178 O TRP 27 15.982 8.047 22.236 1.00 5.21 ATOM 179 CB TRP 27 17.474 9.664 23.991 1.00 5.21 ATOM 180 CEN TRP 27 19.156 10.071 23.710 1.00 5.21 ATOM 182 N GLU 28 14.062 8.706 23.207 1.00 5.03 ATOM 183 CA GLU 28 13.280 7.599 22.668 1.00 5.03 ATOM 184 C GLU 28 13.058 7.760 21.170 1.00 5.03 ATOM 185 O GLU 28 12.764 6.792 20.469 1.00 5.03 ATOM 186 CB GLU 28 11.935 7.493 23.390 1.00 5.03 ATOM 187 CEN GLU 28 10.948 6.768 24.574 1.00 5.03 ATOM 189 N ASP 29 13.200 8.988 20.684 1.00 6.14 ATOM 190 CA ASP 29 12.911 9.299 19.289 1.00 6.14 ATOM 191 C ASP 29 14.132 9.068 18.408 1.00 6.14 ATOM 192 O ASP 29 14.015 8.934 17.191 1.00 6.14 ATOM 193 CB ASP 29 12.429 10.746 19.150 1.00 6.14 ATOM 194 CEN ASP 29 11.566 11.281 19.075 1.00 6.14 ATOM 196 N ASP 30 15.305 9.023 19.033 1.00 6.11 ATOM 197 CA ASP 30 16.555 8.853 18.302 1.00 6.11 ATOM 198 C ASP 30 17.524 7.963 19.069 1.00 6.11 ATOM 199 O ASP 30 18.327 8.447 19.869 1.00 6.11 ATOM 200 CB ASP 30 17.201 10.212 18.019 1.00 6.11 ATOM 201 CEN ASP 30 17.276 10.904 17.276 1.00 6.11 ATOM 203 N PRO 31 17.446 6.660 18.822 1.00 6.54 ATOM 204 CA PRO 31 18.092 5.676 19.683 1.00 6.54 ATOM 205 C PRO 31 19.587 5.596 19.402 1.00 6.54 ATOM 206 O PRO 31 20.397 5.484 20.321 1.00 6.54 ATOM 207 CB PRO 31 17.370 4.359 19.357 1.00 6.54 ATOM 208 CEN PRO 31 16.486 5.359 18.173 1.00 6.54 ATOM 209 N VAL 32 19.948 5.652 18.124 1.00 6.54 ATOM 210 CA VAL 32 21.283 5.263 17.686 1.00 6.54 ATOM 211 C VAL 32 21.945 6.375 16.882 1.00 6.54 ATOM 212 O VAL 32 21.324 7.399 16.593 1.00 6.54 ATOM 213 CB VAL 32 21.247 3.980 16.836 1.00 6.54 ATOM 214 CEN VAL 32 21.410 3.310 16.835 1.00 6.54 ATOM 216 N GLN 33 23.207 6.168 16.522 1.00 5.67 ATOM 217 CA GLN 33 23.947 7.141 15.728 1.00 5.67 ATOM 218 C GLN 33 23.176 7.530 14.474 1.00 5.67 ATOM 219 O GLN 33 23.348 8.627 13.943 1.00 5.67 ATOM 220 CB GLN 33 25.319 6.584 15.340 1.00 5.67 ATOM 221 CEN GLN 33 27.022 6.605 15.726 1.00 5.67 ATOM 223 N SER 34 22.326 6.623 14.003 1.00 5.61 ATOM 224 CA SER 34 21.561 6.852 12.784 1.00 5.61 ATOM 225 C SER 34 20.382 7.782 13.038 1.00 5.61 ATOM 226 O SER 34 19.988 8.555 12.164 1.00 5.61 ATOM 227 CB SER 34 21.078 5.531 12.216 1.00 5.61 ATOM 228 CEN SER 34 20.893 5.020 12.205 1.00 5.61 ATOM 230 N ALA 35 19.821 7.703 14.240 1.00 5.61 ATOM 231 CA ALA 35 18.651 8.498 14.594 1.00 5.61 ATOM 232 C ALA 35 19.051 9.768 15.336 1.00 5.61 ATOM 233 O ALA 35 18.306 10.747 15.357 1.00 5.61 ATOM 234 CB ALA 35 17.683 7.674 15.430 1.00 5.61 ATOM 235 CEN ALA 35 17.684 7.675 15.430 1.00 5.61 ATOM 237 N ASP 36 20.233 9.743 15.944 1.00 6.06 ATOM 238 CA ASP 36 20.772 10.919 16.618 1.00 6.06 ATOM 239 C ASP 36 22.240 11.127 16.271 1.00 6.06 ATOM 240 O ASP 36 23.122 10.883 17.095 1.00 6.06 ATOM 241 CB ASP 36 20.602 10.792 18.134 1.00 6.06 ATOM 242 CEN ASP 36 19.977 11.093 18.880 1.00 6.06 ATOM 244 N PRO 37 22.496 11.579 15.048 1.00 5.51 ATOM 245 CA PRO 37 23.859 11.828 14.594 1.00 5.51 ATOM 246 C PRO 37 24.555 12.856 15.477 1.00 5.51 ATOM 247 O PRO 37 25.773 12.821 15.645 1.00 5.51 ATOM 248 CB PRO 37 23.687 12.329 13.150 1.00 5.51 ATOM 249 CEN PRO 37 21.946 12.165 13.502 1.00 5.51 ATOM 250 N ASP 38 23.772 13.771 16.042 1.00 5.87 ATOM 251 CA ASP 38 24.321 14.857 16.846 1.00 5.87 ATOM 252 C ASP 38 25.066 14.320 18.061 1.00 5.87 ATOM 253 O ASP 38 26.108 14.852 18.447 1.00 5.87 ATOM 254 CB ASP 38 23.208 15.809 17.290 1.00 5.87 ATOM 255 CEN ASP 38 22.783 16.697 17.026 1.00 5.87 ATOM 257 N PHE 39 24.528 13.264 18.661 1.00 6.21 ATOM 258 CA PHE 39 25.107 12.691 19.870 1.00 6.21 ATOM 259 C PHE 39 26.215 11.701 19.534 1.00 6.21 ATOM 260 O PHE 39 25.948 10.558 19.161 1.00 6.21 ATOM 261 CB PHE 39 24.026 12.007 20.708 1.00 6.21 ATOM 262 CEN PHE 39 23.119 12.332 21.972 1.00 6.21 ATOM 264 N SER 40 27.461 12.145 19.668 1.00 6.00 ATOM 265 CA SER 40 28.607 11.355 19.237 1.00 6.00 ATOM 266 C SER 40 28.797 10.131 20.125 1.00 6.00 ATOM 267 O SER 40 29.504 9.192 19.759 1.00 6.00 ATOM 268 CB SER 40 29.860 12.209 19.239 1.00 6.00 ATOM 269 CEN SER 40 30.214 12.591 19.395 1.00 6.00 ATOM 271 N GLY 41 28.163 10.149 21.292 1.00 6.44 ATOM 272 CA GLY 41 28.376 9.112 22.295 1.00 6.44 ATOM 273 C GLY 41 27.134 8.247 22.465 1.00 6.44 ATOM 274 O GLY 41 27.091 7.368 23.326 1.00 6.44 ATOM 275 CEN GLY 41 28.376 9.112 22.295 1.00 6.44 ATOM 277 N GLY 42 26.125 8.500 21.638 1.00 6.46 ATOM 278 CA GLY 42 24.812 7.893 21.823 1.00 6.46 ATOM 279 C GLY 42 24.145 8.400 23.095 1.00 6.46 ATOM 280 O GLY 42 24.176 9.594 23.391 1.00 6.46 ATOM 281 CEN GLY 42 24.812 7.893 21.823 1.00 6.46 ATOM 283 N ALA 43 23.541 7.484 23.845 1.00 7.10 ATOM 284 CA ALA 43 22.828 7.842 25.066 1.00 7.10 ATOM 285 C ALA 43 23.782 8.380 26.124 1.00 7.10 ATOM 286 O ALA 43 23.451 9.311 26.858 1.00 7.10 ATOM 287 CB ALA 43 22.059 6.643 25.601 1.00 7.10 ATOM 288 CEN ALA 43 22.059 6.644 25.601 1.00 7.10 ATOM 290 N ASN 44 24.970 7.789 26.198 1.00 5.51 ATOM 291 CA ASN 44 25.939 8.142 27.229 1.00 5.51 ATOM 292 C ASN 44 26.523 9.527 26.984 1.00 5.51 ATOM 293 O ASN 44 26.968 10.198 27.916 1.00 5.51 ATOM 294 CB ASN 44 27.050 7.113 27.323 1.00 5.51 ATOM 295 CEN ASN 44 27.264 6.240 27.865 1.00 5.51 ATOM 297 N SER 45 26.520 9.951 25.725 1.00 5.19 ATOM 298 CA SER 45 27.111 11.228 25.345 1.00 5.19 ATOM 299 C SER 45 26.511 12.374 26.150 1.00 5.19 ATOM 300 O SER 45 27.235 13.198 26.709 1.00 5.19 ATOM 301 CB SER 45 26.923 11.470 23.860 1.00 5.19 ATOM 302 CEN SER 45 26.687 11.462 23.370 1.00 5.19 ATOM 304 N PRO 46 25.184 12.419 26.205 1.00 5.19 ATOM 305 CA PRO 46 24.483 13.487 26.908 1.00 5.19 ATOM 306 C PRO 46 23.827 12.970 28.182 1.00 5.19 ATOM 307 O PRO 46 23.370 11.829 28.236 1.00 5.19 ATOM 308 CB PRO 46 23.449 13.992 25.888 1.00 5.19 ATOM 309 CEN PRO 46 24.109 12.691 24.861 1.00 5.19 ATOM 310 N SER 47 23.786 13.816 29.205 1.00 4.41 ATOM 311 CA SER 47 22.959 13.560 30.379 1.00 4.41 ATOM 312 C SER 47 21.537 14.064 30.172 1.00 4.41 ATOM 313 O SER 47 21.232 14.689 29.157 1.00 4.41 ATOM 314 CB SER 47 23.577 14.206 31.604 1.00 4.41 ATOM 315 CEN SER 47 23.846 14.571 31.904 1.00 4.41 ATOM 317 N LEU 48 20.670 13.788 31.141 1.00 4.38 ATOM 318 CA LEU 48 19.283 14.230 31.076 1.00 4.38 ATOM 319 C LEU 48 19.193 15.737 30.870 1.00 4.38 ATOM 320 O LEU 48 18.360 16.220 30.105 1.00 4.38 ATOM 321 CB LEU 48 18.535 13.819 32.350 1.00 4.38 ATOM 322 CEN LEU 48 17.515 12.705 32.652 1.00 4.38 ATOM 324 N ASN 49 20.057 16.475 31.560 1.00 4.17 ATOM 325 CA ASN 49 20.115 17.924 31.412 1.00 4.17 ATOM 326 C ASN 49 20.289 18.322 29.952 1.00 4.17 ATOM 327 O ASN 49 19.555 19.167 29.437 1.00 4.17 ATOM 328 CB ASN 49 21.225 18.525 32.255 1.00 4.17 ATOM 329 CEN ASN 49 21.345 18.934 33.214 1.00 4.17 ATOM 331 N GLU 50 21.262 17.710 29.289 1.00 4.18 ATOM 332 CA GLU 50 21.544 18.010 27.890 1.00 4.18 ATOM 333 C GLU 50 20.489 17.404 26.973 1.00 4.18 ATOM 334 O GLU 50 20.068 18.026 25.998 1.00 4.18 ATOM 335 CB GLU 50 22.933 17.500 27.501 1.00 4.18 ATOM 336 CEN GLU 50 24.590 17.790 27.227 1.00 4.18 ATOM 338 N ALA 51 20.064 16.186 27.293 1.00 4.03 ATOM 339 CA ALA 51 18.955 15.552 26.589 1.00 4.03 ATOM 340 C ALA 51 17.641 16.266 26.876 1.00 4.03 ATOM 341 O ALA 51 16.772 16.359 26.009 1.00 4.03 ATOM 342 CB ALA 51 18.858 14.082 26.969 1.00 4.03 ATOM 343 CEN ALA 51 18.857 14.083 26.968 1.00 4.03 ATOM 345 N LYS 52 17.501 16.769 28.098 1.00 4.11 ATOM 346 CA LYS 52 16.288 17.467 28.504 1.00 4.11 ATOM 347 C LYS 52 16.071 18.726 27.673 1.00 4.11 ATOM 348 O LYS 52 14.937 19.088 27.363 1.00 4.11 ATOM 349 CB LYS 52 16.347 17.824 29.990 1.00 4.11 ATOM 350 CEN LYS 52 15.725 17.426 31.974 1.00 4.11 ATOM 352 N ARG 53 17.166 19.388 27.315 1.00 3.97 ATOM 353 CA ARG 53 17.104 20.555 26.443 1.00 3.97 ATOM 354 C ARG 53 16.584 20.183 25.060 1.00 3.97 ATOM 355 O ARG 53 15.748 20.885 24.491 1.00 3.97 ATOM 356 CB ARG 53 18.441 21.279 26.358 1.00 3.97 ATOM 357 CEN ARG 53 20.250 22.914 26.811 1.00 3.97 ATOM 359 N ALA 54 17.082 19.074 24.525 1.00 4.01 ATOM 360 CA ALA 54 16.568 18.528 23.274 1.00 4.01 ATOM 361 C ALA 54 15.155 17.987 23.449 1.00 4.01 ATOM 362 O ALA 54 14.303 18.158 22.576 1.00 4.01 ATOM 363 CB ALA 54 17.494 17.441 22.749 1.00 4.01 ATOM 364 CEN ALA 54 17.493 17.441 22.749 1.00 4.01 ATOM 366 N PHE 55 14.911 17.337 24.581 1.00 4.76 ATOM 367 CA PHE 55 13.610 16.741 24.857 1.00 4.76 ATOM 368 C PHE 55 12.536 17.810 25.011 1.00 4.76 ATOM 369 O PHE 55 11.412 17.648 24.538 1.00 4.76 ATOM 370 CB PHE 55 13.675 15.875 26.117 1.00 4.76 ATOM 371 CEN PHE 55 13.831 14.339 26.497 1.00 4.76 ATOM 373 N ASN 56 12.889 18.905 25.676 1.00 4.54 ATOM 374 CA ASN 56 11.969 20.021 25.860 1.00 4.54 ATOM 375 C ASN 56 11.637 20.685 24.530 1.00 4.54 ATOM 376 O ASN 56 10.487 21.041 24.273 1.00 4.54 ATOM 377 CB ASN 56 12.525 21.044 26.832 1.00 4.54 ATOM 378 CEN ASN 56 12.481 21.251 27.861 1.00 4.54 ATOM 380 N GLU 57 12.650 20.848 23.686 1.00 4.60 ATOM 381 CA GLU 57 12.457 21.423 22.360 1.00 4.60 ATOM 382 C GLU 57 11.504 20.577 21.526 1.00 4.60 ATOM 383 O GLU 57 10.617 21.105 20.854 1.00 4.60 ATOM 384 CB GLU 57 13.799 21.568 21.640 1.00 4.60 ATOM 385 CEN GLU 57 15.122 22.530 21.158 1.00 4.60 ATOM 387 N GLN 58 11.691 19.263 21.573 1.00 4.86 ATOM 388 CA GLN 58 10.813 18.338 20.866 1.00 4.86 ATOM 389 C GLN 58 9.614 17.952 21.724 1.00 4.86 ATOM 390 O GLN 58 8.502 18.194 21.343 1.00 4.86 ATOM 391 CB GLN 58 11.580 17.079 20.454 1.00 4.86 ATOM 392 CEN GLN 58 12.382 16.275 19.128 1.00 4.86 TER END