####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 97 ( 476), selected 85 , name T0970TS112_4 # Molecule2: number of CA atoms 85 ( 650), selected 85 , name T0970.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0970TS112_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 85 1 - 97 4.88 4.88 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 47 - 68 1.88 5.38 LONGEST_CONTINUOUS_SEGMENT: 22 53 - 74 1.81 5.75 LCS_AVERAGE: 19.43 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 17 - 32 0.87 5.70 LONGEST_CONTINUOUS_SEGMENT: 16 18 - 33 0.99 5.86 LONGEST_CONTINUOUS_SEGMENT: 16 53 - 68 0.72 5.95 LCS_AVERAGE: 12.43 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 85 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT K 1 K 1 3 12 85 0 3 8 42 46 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT R 2 R 2 3 12 85 0 4 9 13 20 38 52 58 62 69 73 75 76 76 78 79 79 81 82 83 LCS_GDT S 3 S 3 3 12 85 0 4 17 20 43 49 53 63 67 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT G 4 G 4 9 12 85 9 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT F 5 F 5 9 12 85 14 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT L 6 L 6 9 12 85 14 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT T 7 T 7 9 12 85 14 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT L 8 L 8 9 12 85 9 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT G 9 G 9 9 12 85 9 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT Y 10 Y 10 9 12 85 9 27 36 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT R 11 R 11 9 12 85 4 13 32 41 50 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT G 12 G 12 9 12 85 4 12 26 31 50 55 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT S 13 S 13 3 11 85 3 3 6 13 31 47 58 64 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT Y 14 Y 14 3 3 85 3 3 3 7 7 9 10 13 18 25 35 41 57 64 77 79 79 81 82 83 LCS_GDT V 15 V 15 3 19 85 0 3 3 5 9 15 31 54 64 67 72 75 76 76 78 79 79 81 82 83 LCS_GDT A 16 A 16 9 20 85 3 14 35 45 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT R 17 R 17 16 20 85 13 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT I 18 I 18 16 20 85 14 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT M 19 M 19 16 20 85 14 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT V 20 V 20 16 20 85 14 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT C 21 C 21 16 20 85 8 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT G 22 G 22 16 20 85 6 27 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT R 23 R 23 16 20 85 7 17 36 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT I 24 I 24 16 20 85 7 26 36 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT A 25 A 25 16 20 85 7 17 31 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT L 26 L 26 16 20 85 7 17 27 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT A 27 A 27 16 20 85 6 17 27 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT K 28 K 28 16 20 85 7 17 27 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT E 29 E 29 16 20 85 6 17 27 31 50 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT V 30 V 30 16 20 85 6 17 27 32 50 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT F 31 F 31 16 20 85 6 17 27 34 52 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT G 32 G 32 16 20 85 4 17 27 37 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT D 33 D 33 16 20 85 4 11 17 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT T 34 T 34 14 20 85 4 11 13 16 28 47 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT L 35 L 35 14 20 85 4 11 15 34 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT N 36 N 36 3 20 85 3 3 3 9 24 36 47 57 62 67 72 74 76 76 78 79 79 81 82 83 LCS_GDT E 37 E 37 3 15 85 3 3 3 3 3 5 25 34 49 60 64 66 74 76 77 78 79 81 82 83 LCS_GDT S 38 S 38 3 5 85 0 3 3 5 7 16 20 40 54 61 67 70 74 76 77 78 79 81 82 83 LCS_GDT F 47 F 47 6 22 85 12 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT Y 48 Y 48 6 22 85 14 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT L 49 L 49 6 22 85 5 21 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT K 50 K 50 6 22 85 3 5 7 24 39 54 61 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT F 51 F 51 6 22 85 3 5 9 25 38 53 62 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT T 52 T 52 6 22 85 3 3 6 18 32 52 62 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT Y 53 Y 53 16 22 85 10 23 37 43 49 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT L 54 L 54 16 22 85 10 24 37 46 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT E 55 E 55 16 22 85 8 28 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT Q 56 Q 56 16 22 85 10 28 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT A 57 A 57 16 22 85 10 28 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT F 58 F 58 16 22 85 10 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT D 59 D 59 16 22 85 10 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT R 60 R 60 16 22 85 14 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT L 61 L 61 16 22 85 14 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT S 62 S 62 16 22 85 10 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT E 63 E 63 16 22 85 10 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT A 64 A 64 16 22 85 13 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT G 65 G 65 16 22 85 9 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT F 66 F 66 16 22 85 9 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT H 67 H 67 16 22 85 14 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT M 68 M 68 16 22 85 8 17 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT V 69 V 69 6 22 85 5 5 15 23 45 52 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT A 70 A 70 6 22 85 5 5 7 11 20 38 50 58 64 70 73 75 76 76 78 79 79 81 82 83 LCS_GDT C 71 C 71 6 22 85 5 12 37 44 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT N 72 N 72 6 22 85 5 5 15 36 45 50 61 65 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT S 73 S 73 6 22 85 5 5 5 7 45 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT S 74 S 74 6 22 85 3 9 30 39 52 57 64 65 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT G 75 G 75 4 4 85 3 3 4 18 31 46 56 62 65 69 72 75 76 76 78 79 79 81 82 83 LCS_GDT T 76 T 76 4 4 85 3 3 4 4 4 5 7 10 13 18 23 28 33 42 62 75 79 81 82 83 LCS_GDT A 77 A 77 4 4 85 0 3 4 4 4 5 6 10 12 14 17 21 31 33 34 53 74 77 80 83 LCS_GDT A 78 A 78 3 3 85 1 3 3 3 4 5 6 10 12 13 15 17 20 21 33 34 42 64 68 82 LCS_GDT F 79 F 79 3 4 85 0 3 3 3 4 5 6 6 7 8 10 12 13 15 16 17 17 19 22 23 LCS_GDT K 84 K 84 3 4 85 0 3 3 4 5 6 8 12 18 24 45 59 70 75 78 79 79 81 82 83 LCS_GDT I 85 I 85 3 4 85 3 3 3 4 5 7 10 12 18 29 45 61 70 75 78 79 79 81 82 83 LCS_GDT W 86 W 86 8 12 85 3 5 7 12 21 43 52 60 67 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT S 87 S 87 11 12 85 7 29 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT S 88 S 88 11 12 85 5 24 37 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT Y 89 Y 89 11 12 85 5 21 37 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT T 90 T 90 11 12 85 8 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT E 91 E 91 11 12 85 6 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT Y 92 Y 92 11 12 85 14 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT I 93 I 93 11 12 85 13 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT F 94 F 94 11 12 85 14 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT F 95 F 95 11 12 85 13 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT R 96 R 96 11 12 85 14 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_GDT P 97 P 97 11 12 85 14 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 LCS_AVERAGE LCS_A: 43.95 ( 12.43 19.43 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 30 38 47 53 57 64 66 69 71 73 75 76 76 78 79 79 81 82 83 GDT PERCENT_AT 16.47 35.29 44.71 55.29 62.35 67.06 75.29 77.65 81.18 83.53 85.88 88.24 89.41 89.41 91.76 92.94 92.94 95.29 96.47 97.65 GDT RMS_LOCAL 0.42 0.62 0.90 1.25 1.48 1.63 1.97 2.06 2.22 2.38 2.57 2.75 2.83 2.83 3.22 3.35 3.35 3.60 3.85 4.15 GDT RMS_ALL_AT 5.16 5.19 5.15 5.13 5.13 5.16 5.20 5.28 5.22 5.19 5.20 5.13 5.13 5.13 5.03 5.02 5.02 5.03 4.97 4.92 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA K 1 K 1 3.499 5 0.057 0.052 6.084 4.545 6.263 - LGA R 2 R 2 7.684 6 0.622 0.561 9.462 0.000 0.000 - LGA S 3 S 3 5.917 1 0.521 0.526 6.327 1.364 0.909 - LGA G 4 G 4 1.354 0 0.219 0.219 2.685 52.273 52.273 - LGA F 5 F 5 1.134 6 0.175 0.196 1.453 65.455 29.752 - LGA L 6 L 6 1.056 3 0.069 0.123 1.172 65.455 42.955 - LGA T 7 T 7 0.771 2 0.070 0.075 1.029 81.818 56.104 - LGA L 8 L 8 1.034 3 0.052 0.099 1.343 77.727 47.045 - LGA G 9 G 9 1.018 0 0.095 0.095 1.514 61.818 61.818 - LGA Y 10 Y 10 1.457 7 0.045 0.084 1.578 61.818 26.061 - LGA R 11 R 11 2.452 6 0.075 0.129 3.543 28.636 12.066 - LGA G 12 G 12 3.579 0 0.404 0.404 3.579 35.455 35.455 - LGA S 13 S 13 4.426 1 0.068 0.100 7.703 5.909 4.242 - LGA Y 14 Y 14 9.401 7 0.491 0.453 11.337 0.000 0.000 - LGA V 15 V 15 6.003 2 0.508 0.481 7.025 0.455 0.260 - LGA A 16 A 16 3.001 0 0.598 0.561 3.401 33.636 30.545 - LGA R 17 R 17 1.128 6 0.202 0.212 1.985 70.000 31.405 - LGA I 18 I 18 0.619 3 0.077 0.083 0.866 86.364 53.409 - LGA M 19 M 19 0.328 3 0.135 0.145 1.098 91.364 55.909 - LGA V 20 V 20 0.139 2 0.109 0.114 0.622 95.455 66.234 - LGA C 21 C 21 0.901 1 0.074 0.090 1.180 86.364 68.485 - LGA G 22 G 22 1.044 0 0.246 0.246 1.630 61.818 61.818 - LGA R 23 R 23 1.530 6 0.082 0.096 1.764 61.818 27.107 - LGA I 24 I 24 1.039 3 0.070 0.088 1.435 65.455 40.909 - LGA A 25 A 25 1.869 0 0.063 0.084 2.190 44.545 45.818 - LGA L 26 L 26 2.396 3 0.075 0.083 2.517 35.455 22.500 - LGA A 27 A 27 1.859 0 0.057 0.074 2.219 47.727 51.273 - LGA K 28 K 28 1.988 4 0.074 0.081 2.480 44.545 25.455 - LGA E 29 E 29 3.058 4 0.058 0.061 3.328 20.455 11.111 - LGA V 30 V 30 2.830 2 0.088 0.093 3.217 25.000 18.182 - LGA F 31 F 31 2.572 6 0.142 0.146 2.801 35.455 15.372 - LGA G 32 G 32 2.648 0 0.188 0.188 2.648 32.727 32.727 - LGA D 33 D 33 2.320 3 0.149 0.143 3.420 31.364 20.455 - LGA T 34 T 34 4.136 2 0.102 0.127 4.767 9.091 5.455 - LGA L 35 L 35 2.880 3 0.599 0.539 3.499 20.455 16.591 - LGA N 36 N 36 6.653 3 0.556 0.507 9.311 0.000 0.000 - LGA E 37 E 37 9.448 4 0.568 0.526 10.591 0.000 0.000 - LGA S 38 S 38 9.024 1 0.521 0.477 9.478 0.000 0.000 - LGA F 47 F 47 0.848 6 0.150 0.187 1.098 77.727 35.702 - LGA Y 48 Y 48 0.304 7 0.129 0.127 0.829 95.455 38.636 - LGA L 49 L 49 0.787 3 0.051 0.104 2.160 67.727 46.364 - LGA K 50 K 50 3.795 4 0.042 0.044 5.077 15.000 6.667 - LGA F 51 F 51 3.865 6 0.098 0.095 3.993 12.727 5.620 - LGA T 52 T 52 3.506 2 0.460 0.455 5.446 28.182 16.104 - LGA Y 53 Y 53 3.162 7 0.634 0.584 5.819 37.273 12.424 - LGA L 54 L 54 2.095 3 0.077 0.091 2.645 45.455 27.500 - LGA E 55 E 55 1.852 4 0.065 0.060 2.260 51.364 27.071 - LGA Q 56 Q 56 2.027 4 0.059 0.056 2.372 47.727 25.455 - LGA A 57 A 57 1.826 0 0.065 0.058 1.907 58.182 56.727 - LGA F 58 F 58 1.142 6 0.066 0.063 1.450 65.455 29.752 - LGA D 59 D 59 1.245 3 0.060 0.060 1.381 65.455 40.909 - LGA R 60 R 60 1.436 6 0.049 0.061 1.465 65.455 29.752 - LGA L 61 L 61 1.328 3 0.076 0.074 1.385 65.455 40.909 - LGA S 62 S 62 1.596 1 0.084 0.080 1.659 54.545 44.848 - LGA E 63 E 63 1.582 4 0.091 0.096 1.832 50.909 28.283 - LGA A 64 A 64 1.770 0 0.131 0.138 2.174 47.727 45.818 - LGA G 65 G 65 1.584 0 0.334 0.334 1.587 58.182 58.182 - LGA F 66 F 66 1.573 6 0.083 0.083 1.837 54.545 24.463 - LGA H 67 H 67 1.185 5 0.116 0.110 1.742 82.727 38.182 - LGA M 68 M 68 1.538 3 0.120 0.124 3.314 44.545 25.682 - LGA V 69 V 69 4.159 2 0.561 0.556 5.807 8.636 5.714 - LGA A 70 A 70 6.310 0 0.173 0.237 9.060 0.455 0.364 - LGA C 71 C 71 2.675 1 0.083 0.076 4.327 15.455 18.788 - LGA N 72 N 72 5.119 3 0.077 0.134 7.938 2.727 1.364 - LGA S 73 S 73 3.061 1 0.564 0.531 4.136 17.273 13.333 - LGA S 74 S 74 4.145 1 0.642 0.581 6.216 5.909 3.939 - LGA G 75 G 75 7.311 0 0.114 0.114 9.624 0.000 0.000 - LGA T 76 T 76 13.623 2 0.579 0.559 15.680 0.000 0.000 - LGA A 77 A 77 16.354 0 0.663 0.610 18.619 0.000 0.000 - LGA A 78 A 78 17.333 0 0.603 0.545 18.352 0.000 0.000 - LGA F 79 F 79 21.727 6 0.198 0.192 24.007 0.000 0.000 - LGA K 84 K 84 11.092 4 0.468 0.469 12.322 0.000 0.000 - LGA I 85 I 85 10.732 3 0.542 0.488 12.401 0.000 0.000 - LGA W 86 W 86 6.140 9 0.150 0.138 7.121 12.273 3.506 - LGA S 87 S 87 2.101 1 0.285 0.268 3.887 21.818 17.576 - LGA S 88 S 88 2.392 1 0.125 0.129 2.970 48.182 36.667 - LGA Y 89 Y 89 1.636 7 0.126 0.120 2.864 47.727 18.182 - LGA T 90 T 90 1.070 2 0.145 0.152 1.399 73.636 51.429 - LGA E 91 E 91 0.888 4 0.080 0.087 1.667 81.818 42.020 - LGA Y 92 Y 92 0.145 7 0.072 0.105 0.831 95.455 38.636 - LGA I 93 I 93 0.520 3 0.073 0.077 1.051 90.909 53.636 - LGA F 94 F 94 0.242 6 0.116 0.119 0.688 90.909 42.149 - LGA F 95 F 95 1.164 6 0.090 0.084 1.242 73.636 32.727 - LGA R 96 R 96 1.335 6 0.061 0.060 1.816 58.182 25.785 - LGA P 97 P 97 1.485 3 0.376 0.594 5.568 32.727 28.052 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 85 340 338 99.41 650 416 64.00 85 0 SUMMARY(RMSD_GDC): 4.885 4.952 5.048 41.310 26.057 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 97 85 4.0 66 2.06 65.294 56.747 3.052 LGA_LOCAL RMSD: 2.063 Number of atoms: 66 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.283 Number of assigned atoms: 85 Std_ASGN_ATOMS RMSD: 4.885 Standard rmsd on all 85 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.543505 * X + -0.817966 * Y + -0.188502 * Z + 240.634369 Y_new = -0.836255 * X + 0.508196 * Y + 0.205949 * Z + -10.538383 Z_new = -0.072664 * X + 0.269571 * Y + -0.960235 * Z + 218.753983 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.147121 0.072728 2.867903 [DEG: -123.0210 4.1670 164.3188 ] ZXZ: -2.400397 2.858640 -0.263295 [DEG: -137.5326 163.7880 -15.0857 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0970TS112_4 REMARK 2: T0970.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0970TS112_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 97 85 4.0 66 2.06 56.747 4.88 REMARK ---------------------------------------------------------- MOLECULE T0970TS112_4 PFRMAT TS TARGET T0970 MODEL 4 PARENT N/A ATOM 1 CA LYS 1 69.190 30.824 71.796 1.00 6.77 C ATOM 2 C LYS 1 69.328 32.385 71.792 1.00 6.24 C ATOM 3 O LYS 1 70.009 33.012 72.417 1.00 6.41 O ATOM 4 CB LYS 1 68.369 30.451 73.013 1.00 7.10 C ATOM 5 N ARG 2 68.637 32.982 71.056 1.00 5.91 N ATOM 6 CA ARG 2 68.623 34.474 70.910 1.00 5.71 C ATOM 7 C ARG 2 67.230 35.034 71.303 1.00 5.24 C ATOM 8 O ARG 2 66.226 34.586 71.030 1.00 5.18 O ATOM 9 CB ARG 2 68.871 34.787 69.439 1.00 6.10 C ATOM 10 N SER 3 67.209 36.022 71.936 1.00 5.22 N ATOM 11 CA SER 3 65.989 36.702 72.405 1.00 5.18 C ATOM 12 C SER 3 65.297 35.847 73.513 1.00 4.59 C ATOM 13 O SER 3 64.191 35.712 73.712 1.00 4.76 O ATOM 14 CB SER 3 64.956 36.918 71.310 1.00 5.92 C ATOM 15 N GLY 4 65.994 35.273 74.222 1.00 4.21 N ATOM 16 CA GLY 4 65.534 34.410 75.345 1.00 3.88 C ATOM 17 C GLY 4 64.849 35.365 76.362 1.00 3.95 C ATOM 18 O GLY 4 65.290 36.267 76.854 1.00 3.88 O ATOM 20 N PHE 5 63.759 35.127 76.660 1.00 4.28 N ATOM 21 CA PHE 5 62.952 35.914 77.622 1.00 4.46 C ATOM 22 C PHE 5 62.297 35.070 78.747 1.00 3.91 C ATOM 23 O PHE 5 61.589 34.215 78.619 1.00 4.12 O ATOM 24 CB PHE 5 61.830 36.699 76.855 1.00 5.57 C ATOM 25 N LEU 6 62.543 35.332 79.817 1.00 3.39 N ATOM 26 CA LEU 6 62.013 34.627 81.019 1.00 2.86 C ATOM 27 C LEU 6 61.279 35.698 81.893 1.00 3.12 C ATOM 28 O LEU 6 61.658 36.727 82.216 1.00 3.26 O ATOM 29 CB LEU 6 62.970 33.823 81.878 1.00 1.95 C ATOM 30 N THR 7 60.206 35.431 82.255 1.00 3.45 N ATOM 31 CA THR 7 59.366 36.321 83.110 1.00 3.80 C ATOM 32 C THR 7 59.055 35.697 84.496 1.00 3.23 C ATOM 33 O THR 7 58.653 34.612 84.727 1.00 3.31 O ATOM 34 CB THR 7 58.062 36.617 82.305 1.00 4.94 C ATOM 35 N LEU 8 59.237 36.423 85.386 1.00 2.91 N ATOM 36 CA LEU 8 59.010 36.007 86.779 1.00 2.43 C ATOM 37 C LEU 8 58.136 37.040 87.484 1.00 2.91 C ATOM 38 O LEU 8 58.414 38.105 87.731 1.00 3.29 O ATOM 39 CB LEU 8 60.312 35.654 87.426 1.00 1.89 C ATOM 40 N GLY 9 57.077 36.709 87.788 1.00 3.12 N ATOM 41 CA GLY 9 56.111 37.565 88.473 1.00 3.60 C ATOM 42 C GLY 9 55.692 37.149 89.914 1.00 3.21 C ATOM 43 O GLY 9 55.653 36.084 90.360 1.00 3.10 O ATOM 45 N TYR 10 55.371 38.015 90.611 1.00 3.25 N ATOM 46 CA TYR 10 54.950 37.807 92.023 1.00 3.10 C ATOM 47 C TYR 10 53.783 38.800 92.215 1.00 3.42 C ATOM 48 O TYR 10 53.820 39.933 92.118 1.00 3.86 O ATOM 49 CB TYR 10 56.181 38.060 92.836 1.00 3.22 C ATOM 50 N ARG 11 52.732 38.334 92.499 1.00 3.37 N ATOM 51 CA ARG 11 51.509 39.122 92.720 1.00 3.72 C ATOM 52 C ARG 11 50.855 38.828 94.108 1.00 3.55 C ATOM 53 O ARG 11 50.381 37.863 94.453 1.00 3.49 O ATOM 54 CB ARG 11 50.599 38.991 91.538 1.00 4.19 C ATOM 55 N GLY 12 50.848 39.687 94.877 1.00 3.75 N ATOM 56 CA GLY 12 50.278 39.579 96.247 1.00 3.82 C ATOM 57 C GLY 12 51.422 39.751 97.278 1.00 4.17 C ATOM 58 O GLY 12 51.684 40.683 97.801 1.00 4.59 O ATOM 60 N SER 13 52.089 38.817 97.540 1.00 4.37 N ATOM 61 CA SER 13 53.234 38.789 98.507 1.00 5.16 C ATOM 62 C SER 13 54.499 38.332 97.754 1.00 5.47 C ATOM 63 O SER 13 54.645 37.360 97.246 1.00 5.81 O ATOM 64 CB SER 13 52.726 37.830 99.588 1.00 5.76 C ATOM 65 N TYR 14 55.397 39.045 97.689 1.00 5.64 N ATOM 66 CA TYR 14 56.694 38.775 97.012 1.00 6.25 C ATOM 67 C TYR 14 57.741 38.245 98.036 1.00 6.27 C ATOM 68 O TYR 14 58.114 38.761 98.938 1.00 6.61 O ATOM 69 CB TYR 14 57.243 40.098 96.407 1.00 6.87 C ATOM 70 N VAL 15 58.189 37.192 97.858 1.00 6.21 N ATOM 71 CA VAL 15 59.220 36.518 98.730 1.00 6.58 C ATOM 72 C VAL 15 58.809 35.050 99.026 1.00 6.37 C ATOM 73 O VAL 15 59.444 34.165 98.951 1.00 6.77 O ATOM 74 CB VAL 15 59.316 37.255 100.118 1.00 7.28 C ATOM 75 N ALA 16 57.738 34.843 99.359 1.00 6.00 N ATOM 76 CA ALA 16 57.190 33.509 99.691 1.00 6.07 C ATOM 77 C ALA 16 56.410 32.927 98.459 1.00 5.71 C ATOM 78 O ALA 16 56.127 31.859 98.275 1.00 6.12 O ATOM 79 CB ALA 16 56.217 33.736 100.909 1.00 6.45 C ATOM 80 N ARG 17 56.084 33.655 97.617 1.00 5.08 N ATOM 81 CA ARG 17 55.342 33.275 96.379 1.00 4.81 C ATOM 82 C ARG 17 55.911 33.880 95.075 1.00 4.02 C ATOM 83 O ARG 17 55.782 34.943 94.682 1.00 3.57 O ATOM 84 CB ARG 17 53.914 33.625 96.432 1.00 4.95 C ATOM 85 N ILE 18 56.541 33.182 94.406 1.00 4.05 N ATOM 86 CA ILE 18 57.174 33.575 93.137 1.00 3.48 C ATOM 87 C ILE 18 56.649 32.677 91.975 1.00 3.41 C ATOM 88 O ILE 18 56.517 31.580 91.973 1.00 3.87 O ATOM 89 CB ILE 18 58.713 33.494 93.286 1.00 3.88 C ATOM 90 N MET 19 56.344 33.165 90.983 1.00 3.00 N ATOM 91 CA MET 19 55.826 32.459 89.777 1.00 3.05 C ATOM 92 C MET 19 56.772 32.675 88.607 1.00 2.40 C ATOM 93 O MET 19 57.040 33.675 88.165 1.00 2.23 O ATOM 94 CB MET 19 54.393 32.746 89.339 1.00 3.58 C ATOM 95 N VAL 20 57.261 31.719 88.108 1.00 2.37 N ATOM 96 CA VAL 20 58.192 31.725 86.989 1.00 1.98 C ATOM 97 C VAL 20 57.705 31.057 85.661 1.00 2.08 C ATOM 98 O VAL 20 57.280 30.004 85.539 1.00 2.52 O ATOM 99 CB VAL 20 59.546 31.178 87.419 1.00 2.40 C ATOM 100 N CYS 21 57.784 31.690 84.667 1.00 1.99 N ATOM 101 CA CYS 21 57.372 31.214 83.313 1.00 2.32 C ATOM 102 C CYS 21 58.451 31.550 82.246 1.00 2.13 C ATOM 103 O CYS 21 59.057 32.541 82.141 1.00 2.29 O ATOM 104 CB CYS 21 56.136 31.880 82.834 1.00 3.06 C ATOM 105 N GLY 22 58.664 30.690 81.468 1.00 2.17 N ATOM 106 CA GLY 22 59.668 30.813 80.391 1.00 2.31 C ATOM 107 C GLY 22 59.814 29.423 79.741 1.00 2.26 C ATOM 108 O GLY 22 59.090 28.927 79.038 1.00 2.52 O ATOM 110 N ARG 23 60.750 28.829 79.993 1.00 2.08 N ATOM 111 CA ARG 23 61.065 27.485 79.476 1.00 2.19 C ATOM 112 C ARG 23 61.146 26.369 80.564 1.00 2.04 C ATOM 113 O ARG 23 61.492 26.483 81.624 1.00 1.88 O ATOM 114 CB ARG 23 62.235 27.548 78.531 1.00 2.36 C ATOM 115 N ILE 24 60.811 25.311 80.246 1.00 2.25 N ATOM 116 CA ILE 24 60.825 24.123 81.155 1.00 2.32 C ATOM 117 C ILE 24 62.210 23.646 81.656 1.00 2.35 C ATOM 118 O ILE 24 62.438 23.232 82.647 1.00 2.41 O ATOM 119 CB ILE 24 60.302 22.933 80.326 1.00 2.75 C ATOM 120 N ALA 25 63.110 23.721 80.944 1.00 2.43 N ATOM 121 CA ALA 25 64.510 23.310 81.257 1.00 2.61 C ATOM 122 C ALA 25 65.215 24.321 82.231 1.00 2.42 C ATOM 123 O ALA 25 65.945 24.074 83.056 1.00 2.58 O ATOM 124 CB ALA 25 65.218 23.137 79.873 1.00 2.85 C ATOM 125 N LEU 26 64.946 25.452 82.100 1.00 2.18 N ATOM 126 CA LEU 26 65.507 26.557 82.945 1.00 2.07 C ATOM 127 C LEU 26 64.778 26.494 84.304 1.00 1.96 C ATOM 128 O LEU 26 65.220 26.680 85.330 1.00 2.11 O ATOM 129 CB LEU 26 65.185 27.928 82.240 1.00 1.94 C ATOM 130 N ALA 27 63.634 26.224 84.272 1.00 1.81 N ATOM 131 CA ALA 27 62.776 26.115 85.470 1.00 1.78 C ATOM 132 C ALA 27 63.293 25.037 86.438 1.00 2.06 C ATOM 133 O ALA 27 63.281 25.066 87.572 1.00 2.21 O ATOM 134 CB ALA 27 61.377 26.016 84.973 1.00 1.75 C ATOM 135 N LYS 28 63.738 24.096 85.962 1.00 2.24 N ATOM 136 CA LYS 28 64.283 22.969 86.738 1.00 2.63 C ATOM 137 C LYS 28 65.635 23.312 87.410 1.00 2.94 C ATOM 138 O LYS 28 65.960 23.045 88.456 1.00 3.25 O ATOM 139 CB LYS 28 64.581 21.716 85.848 1.00 2.87 C ATOM 140 N GLU 29 66.408 23.928 86.776 1.00 2.95 N ATOM 141 CA GLU 29 67.755 24.351 87.248 1.00 3.34 C ATOM 142 C GLU 29 67.647 25.476 88.323 1.00 3.34 C ATOM 143 O GLU 29 68.264 25.601 89.291 1.00 3.69 O ATOM 144 CB GLU 29 68.544 24.909 86.068 1.00 3.47 C ATOM 145 N VAL 30 66.837 26.307 88.119 1.00 2.99 N ATOM 146 CA VAL 30 66.595 27.462 89.029 1.00 3.05 C ATOM 147 C VAL 30 65.722 27.006 90.206 1.00 3.11 C ATOM 148 O VAL 30 65.926 27.199 91.280 1.00 3.43 O ATOM 149 CB VAL 30 65.800 28.566 88.318 1.00 2.75 C ATOM 150 N PHE 31 64.743 26.408 89.958 1.00 2.86 N ATOM 151 CA PHE 31 63.796 25.898 90.940 1.00 2.97 C ATOM 152 C PHE 31 64.299 24.663 91.753 1.00 3.37 C ATOM 153 O PHE 31 64.177 24.516 92.849 1.00 3.68 O ATOM 154 CB PHE 31 62.404 25.481 90.322 1.00 2.65 C ATOM 155 N GLY 32 64.840 23.787 91.188 1.00 3.41 N ATOM 156 CA GLY 32 65.394 22.525 91.798 1.00 3.85 C ATOM 157 C GLY 32 64.493 21.284 91.480 1.00 3.82 C ATOM 158 O GLY 32 63.502 21.315 90.973 1.00 3.83 O ATOM 160 N ASP 33 64.877 20.208 91.778 1.00 3.94 N ATOM 161 CA ASP 33 64.166 18.907 91.555 1.00 4.03 C ATOM 162 C ASP 33 62.766 19.033 92.190 1.00 3.68 C ATOM 163 O ASP 33 61.952 18.316 92.071 1.00 3.68 O ATOM 164 CB ASP 33 64.861 17.663 92.151 1.00 4.65 C ATOM 165 N THR 34 62.537 19.960 92.861 1.00 3.72 N ATOM 166 CA THR 34 61.267 20.248 93.547 1.00 3.71 C ATOM 167 C THR 34 60.127 20.724 92.602 1.00 3.54 C ATOM 168 O THR 34 58.985 20.753 92.832 1.00 3.65 O ATOM 169 CB THR 34 61.528 21.254 94.742 1.00 4.36 C ATOM 170 N LEU 35 60.458 21.091 91.543 1.00 3.75 N ATOM 171 CA LEU 35 59.525 21.571 90.517 1.00 4.14 C ATOM 172 C LEU 35 59.078 20.343 89.696 1.00 3.68 C ATOM 173 O LEU 35 58.222 20.282 88.955 1.00 3.80 O ATOM 174 CB LEU 35 60.235 22.746 89.713 1.00 5.31 C ATOM 175 N ASN 36 59.684 19.386 89.851 1.00 3.54 N ATOM 176 CA ASN 36 59.411 18.117 89.153 1.00 3.73 C ATOM 177 C ASN 36 58.496 17.221 90.067 1.00 3.17 C ATOM 178 O ASN 36 57.732 16.468 89.723 1.00 3.47 O ATOM 179 CB ASN 36 60.776 17.356 88.941 1.00 4.57 C ATOM 180 N GLU 37 58.599 17.329 91.216 1.00 2.85 N ATOM 181 CA GLU 37 57.817 16.553 92.234 1.00 3.21 C ATOM 182 C GLU 37 56.455 17.294 92.379 1.00 3.33 C ATOM 183 O GLU 37 55.460 16.858 92.595 1.00 3.93 O ATOM 184 CB GLU 37 58.634 16.532 93.527 1.00 3.74 C ATOM 185 N SER 38 56.435 18.431 92.252 1.00 3.23 N ATOM 186 CA SER 38 55.235 19.296 92.361 1.00 3.96 C ATOM 187 C SER 38 54.512 19.442 91.003 1.00 4.02 C ATOM 188 O SER 38 53.393 19.598 90.839 1.00 4.53 O ATOM 189 CB SER 38 55.658 20.687 92.878 1.00 4.75 C ATOM 190 N ARG 39 55.173 19.408 90.033 1.00 3.88 N ATOM 191 CA ARG 39 54.660 19.526 88.659 1.00 4.50 C ATOM 192 C ARG 39 53.938 18.228 88.210 1.00 4.62 C ATOM 193 O ARG 39 54.397 17.286 87.783 1.00 5.12 O ATOM 194 CB ARG 39 55.750 19.846 87.691 1.00 4.95 C ATOM 195 N ASP 40 52.783 18.215 88.330 1.00 4.48 N ATOM 196 CA ASP 40 51.936 17.063 87.968 1.00 5.04 C ATOM 197 C ASP 40 51.545 17.102 86.449 1.00 5.19 C ATOM 198 O ASP 40 51.013 16.329 85.846 1.00 5.33 O ATOM 199 CB ASP 40 50.783 16.894 88.908 1.00 5.35 C ATOM 200 N GLU 41 51.823 18.013 85.872 1.00 5.48 N ATOM 201 CA GLU 41 51.551 18.218 84.438 1.00 5.99 C ATOM 202 C GLU 41 50.201 18.991 84.265 1.00 6.42 C ATOM 203 O GLU 41 49.682 19.222 83.291 1.00 6.84 O ATOM 204 CB GLU 41 51.528 16.884 83.729 1.00 6.71 C ATOM 205 N LYS 42 49.669 19.372 85.232 1.00 6.49 N ATOM 206 CA LYS 42 48.385 20.120 85.269 1.00 7.09 C ATOM 207 C LYS 42 48.793 21.598 85.017 1.00 6.64 C ATOM 208 O LYS 42 48.222 22.356 84.417 1.00 6.92 O ATOM 209 CB LYS 42 47.824 20.165 86.743 1.00 7.78 C ATOM 210 N TYR 43 49.795 21.984 85.476 1.00 6.08 N ATOM 211 CA TYR 43 50.357 23.351 85.346 1.00 5.69 C ATOM 212 C TYR 43 51.645 23.233 84.506 1.00 5.28 C ATOM 213 O TYR 43 52.547 22.615 84.738 1.00 5.11 O ATOM 214 CB TYR 43 50.602 23.912 86.700 1.00 5.58 C ATOM 215 N THR 44 51.714 23.848 83.520 1.00 5.40 N ATOM 216 CA THR 44 52.877 23.866 82.598 1.00 5.30 C ATOM 217 C THR 44 53.298 25.363 82.316 1.00 4.86 C ATOM 218 O THR 44 52.647 26.264 82.314 1.00 4.90 O ATOM 219 CB THR 44 52.614 23.282 81.233 1.00 6.09 C ATOM 220 N SER 45 54.406 25.595 82.086 1.00 4.75 N ATOM 221 CA SER 45 54.999 26.956 81.803 1.00 4.66 C ATOM 222 C SER 45 54.796 27.941 83.002 1.00 4.17 C ATOM 223 O SER 45 55.050 28.980 83.039 1.00 4.38 O ATOM 224 CB SER 45 54.510 27.521 80.479 1.00 5.53 C ATOM 225 N ARG 46 54.325 27.578 83.964 1.00 3.91 N ATOM 226 CA ARG 46 54.061 28.382 85.209 1.00 3.85 C ATOM 227 C ARG 46 54.635 27.515 86.358 1.00 3.19 C ATOM 228 O ARG 46 54.159 26.614 86.799 1.00 3.27 O ATOM 229 CB ARG 46 52.487 28.497 85.334 1.00 4.73 C ATOM 230 N PHE 47 55.657 27.839 86.810 1.00 3.03 N ATOM 231 CA PHE 47 56.363 27.129 87.914 1.00 3.02 C ATOM 232 C PHE 47 56.342 28.013 89.191 1.00 3.29 C ATOM 233 O PHE 47 56.740 29.038 89.281 1.00 3.54 O ATOM 234 CB PHE 47 57.887 26.900 87.556 1.00 3.51 C ATOM 235 N TYR 48 55.861 27.571 90.159 1.00 3.61 N ATOM 236 CA TYR 48 55.761 28.263 91.483 1.00 4.26 C ATOM 237 C TYR 48 56.847 27.970 92.509 1.00 4.70 C ATOM 238 O TYR 48 57.221 26.960 92.802 1.00 5.13 O ATOM 239 CB TYR 48 54.339 28.216 91.929 1.00 4.99 C ATOM 240 N LEU 49 57.342 28.882 93.034 1.00 4.86 N ATOM 241 CA LEU 49 58.405 28.797 94.047 1.00 5.55 C ATOM 242 C LEU 49 58.014 29.623 95.311 1.00 6.06 C ATOM 243 O LEU 49 57.555 30.671 95.355 1.00 5.98 O ATOM 244 CB LEU 49 59.807 29.145 93.451 1.00 5.64 C ATOM 245 N LYS 50 58.194 29.119 96.323 1.00 6.77 N ATOM 246 CA LYS 50 57.888 29.742 97.632 1.00 7.47 C ATOM 247 C LYS 50 59.085 29.351 98.552 1.00 7.86 C ATOM 248 O LYS 50 59.765 28.465 98.426 1.00 8.23 O ATOM 249 CB LYS 50 56.555 29.255 98.216 1.00 8.35 C ATOM 250 N PHE 51 59.321 30.039 99.455 1.00 7.92 N ATOM 251 CA PHE 51 60.435 29.827 100.451 1.00 8.37 C ATOM 252 C PHE 51 61.757 30.631 100.166 1.00 8.76 C ATOM 253 O PHE 51 62.817 30.257 100.117 1.00 8.87 O ATOM 254 CB PHE 51 60.762 28.340 100.391 1.00 8.37 C ATOM 255 N THR 52 61.639 31.740 99.979 1.00 9.13 N ATOM 256 CA THR 52 62.788 32.656 99.700 1.00 9.70 C ATOM 257 C THR 52 63.423 32.303 98.323 1.00 9.29 C ATOM 258 O THR 52 64.514 32.434 98.012 1.00 9.32 O ATOM 259 CB THR 52 63.950 32.428 100.652 1.00 10.75 C ATOM 260 N TYR 53 62.708 31.857 97.514 1.00 9.07 N ATOM 261 CA TYR 53 63.137 31.457 96.157 1.00 8.86 C ATOM 262 C TYR 53 63.203 32.696 95.170 1.00 7.71 C ATOM 263 O TYR 53 63.645 32.723 94.162 1.00 7.51 O ATOM 264 CB TYR 53 62.191 30.348 95.636 1.00 9.24 C ATOM 265 N LEU 54 62.738 33.713 95.479 1.00 7.03 N ATOM 266 CA LEU 54 62.718 34.992 94.675 1.00 5.94 C ATOM 267 C LEU 54 64.179 35.513 94.677 1.00 6.09 C ATOM 268 O LEU 54 64.765 35.973 93.806 1.00 5.61 O ATOM 269 CB LEU 54 61.817 36.129 95.064 1.00 5.29 C ATOM 270 N GLU 55 64.730 35.414 95.682 1.00 6.88 N ATOM 271 CA GLU 55 66.131 35.849 95.886 1.00 7.38 C ATOM 272 C GLU 55 67.048 34.906 95.066 1.00 7.79 C ATOM 273 O GLU 55 67.994 35.202 94.486 1.00 7.77 O ATOM 274 CB GLU 55 66.494 35.956 97.306 1.00 8.42 C ATOM 275 N GLN 56 66.713 33.786 95.048 1.00 8.26 N ATOM 276 CA GLN 56 67.462 32.740 94.323 1.00 8.85 C ATOM 277 C GLN 56 67.225 32.861 92.781 1.00 8.04 C ATOM 278 O GLN 56 67.981 32.729 91.948 1.00 8.09 O ATOM 279 CB GLN 56 67.132 31.353 94.861 1.00 9.80 C ATOM 280 N ALA 57 66.153 33.123 92.412 1.00 7.36 N ATOM 281 CA ALA 57 65.755 33.279 90.983 1.00 6.66 C ATOM 282 C ALA 57 66.447 34.520 90.373 1.00 5.72 C ATOM 283 O ALA 57 66.873 34.592 89.378 1.00 5.42 O ATOM 284 CB ALA 57 64.272 33.335 90.828 1.00 6.31 C ATOM 285 N PHE 58 66.552 35.498 91.000 1.00 5.37 N ATOM 286 CA PHE 58 67.187 36.783 90.578 1.00 4.69 C ATOM 287 C PHE 58 68.687 36.514 90.445 1.00 5.40 C ATOM 288 O PHE 58 69.339 36.869 89.601 1.00 5.12 O ATOM 289 CB PHE 58 66.911 37.828 91.627 1.00 4.56 C ATOM 290 N ASP 59 69.202 35.866 91.298 1.00 6.36 N ATOM 291 CA ASP 59 70.627 35.498 91.346 1.00 7.22 C ATOM 292 C ASP 59 70.963 34.415 90.287 1.00 7.27 C ATOM 293 O ASP 59 71.878 34.332 89.621 1.00 7.37 O ATOM 294 CB ASP 59 71.096 35.024 92.735 1.00 8.42 C ATOM 295 N ARG 60 70.194 33.587 90.146 1.00 7.32 N ATOM 296 CA ARG 60 70.360 32.474 89.187 1.00 7.62 C ATOM 297 C ARG 60 70.191 32.938 87.727 1.00 6.60 C ATOM 298 O ARG 60 70.789 32.604 86.830 1.00 6.63 O ATOM 299 CB ARG 60 69.486 31.215 89.578 1.00 8.27 C ATOM 300 N LEU 61 69.362 33.723 87.516 1.00 5.76 N ATOM 301 CA LEU 61 69.070 34.292 86.186 1.00 4.79 C ATOM 302 C LEU 61 70.204 35.227 85.788 1.00 4.26 C ATOM 303 O LEU 61 70.695 35.270 84.785 1.00 3.91 O ATOM 304 CB LEU 61 67.713 35.014 86.086 1.00 4.05 C ATOM 305 N SER 62 70.585 35.972 86.613 1.00 4.43 N ATOM 306 CA SER 62 71.669 36.935 86.419 1.00 4.42 C ATOM 307 C SER 62 72.961 36.117 86.167 1.00 5.17 C ATOM 308 O SER 62 73.777 36.374 85.489 1.00 5.09 O ATOM 309 CB SER 62 71.873 37.856 87.639 1.00 4.98 C ATOM 310 N GLU 63 73.108 35.122 86.748 1.00 5.97 N ATOM 311 CA GLU 63 74.282 34.212 86.645 1.00 6.83 C ATOM 312 C GLU 63 74.319 33.457 85.288 1.00 6.54 C ATOM 313 O GLU 63 75.197 33.222 84.722 1.00 6.71 O ATOM 314 CB GLU 63 74.398 33.327 87.849 1.00 7.96 C ATOM 315 N ALA 64 73.352 33.099 84.808 1.00 6.22 N ATOM 316 CA ALA 64 73.217 32.365 83.521 1.00 6.20 C ATOM 317 C ALA 64 73.622 33.350 82.372 1.00 5.24 C ATOM 318 O ALA 64 74.016 33.097 81.376 1.00 5.30 O ATOM 319 CB ALA 64 71.702 32.013 83.222 1.00 6.36 C ATOM 320 N GLY 65 73.513 34.482 82.542 1.00 4.46 N ATOM 321 CA GLY 65 73.862 35.560 81.570 1.00 3.59 C ATOM 322 C GLY 65 72.493 36.182 81.212 1.00 2.98 C ATOM 323 O GLY 65 71.961 36.084 80.264 1.00 2.87 O ATOM 325 N PHE 66 71.919 36.809 82.000 1.00 2.93 N ATOM 326 CA PHE 66 70.607 37.472 81.848 1.00 2.77 C ATOM 327 C PHE 66 70.492 38.872 82.421 1.00 2.20 C ATOM 328 O PHE 66 71.077 39.288 83.302 1.00 2.06 O ATOM 329 CB PHE 66 69.550 36.514 82.340 1.00 3.45 C ATOM 330 N HIS 67 69.713 39.591 81.895 1.00 2.47 N ATOM 331 CA HIS 67 69.471 40.968 82.311 1.00 2.70 C ATOM 332 C HIS 67 68.163 40.921 83.141 1.00 2.90 C ATOM 333 O HIS 67 67.175 40.616 82.759 1.00 3.48 O ATOM 334 CB HIS 67 69.508 41.897 81.118 1.00 3.56 C ATOM 335 N MET 68 68.200 41.240 84.285 1.00 2.65 N ATOM 336 CA MET 68 67.062 41.262 85.242 1.00 2.82 C ATOM 337 C MET 68 66.530 42.671 85.534 1.00 3.34 C ATOM 338 O MET 68 67.047 43.429 86.157 1.00 3.53 O ATOM 339 CB MET 68 67.482 40.613 86.551 1.00 2.55 C ATOM 340 N VAL 69 65.491 42.992 85.078 1.00 3.95 N ATOM 341 CA VAL 69 64.829 44.291 85.257 1.00 4.75 C ATOM 342 C VAL 69 63.661 43.997 86.236 1.00 4.81 C ATOM 343 O VAL 69 62.963 43.140 86.179 1.00 5.05 O ATOM 344 CB VAL 69 64.512 44.878 83.894 1.00 5.74 C ATOM 345 N ALA 70 63.457 44.734 87.121 1.00 4.80 N ATOM 346 CA ALA 70 62.402 44.612 88.156 1.00 4.89 C ATOM 347 C ALA 70 61.363 45.727 88.058 1.00 5.63 C ATOM 348 O ALA 70 61.568 46.838 88.183 1.00 5.95 O ATOM 349 CB ALA 70 63.225 44.788 89.470 1.00 4.48 C ATOM 350 N CYS 71 60.259 45.401 87.809 1.00 6.10 N ATOM 351 CA CYS 71 59.144 46.328 87.685 1.00 6.93 C ATOM 352 C CYS 71 57.993 46.118 88.668 1.00 6.98 C ATOM 353 O CYS 71 57.321 45.159 88.771 1.00 7.05 O ATOM 354 CB CYS 71 58.510 46.218 86.265 1.00 7.79 C ATOM 355 N ASN 72 57.802 47.040 89.393 1.00 7.08 N ATOM 356 CA ASN 72 56.761 47.031 90.407 1.00 7.16 C ATOM 357 C ASN 72 55.901 48.309 90.246 1.00 7.92 C ATOM 358 O ASN 72 56.252 49.384 90.252 1.00 8.23 O ATOM 359 CB ASN 72 57.194 46.870 91.912 1.00 6.73 C ATOM 360 N SER 73 54.762 48.165 90.106 1.00 8.36 N ATOM 361 CA SER 73 53.797 49.272 89.949 1.00 9.18 C ATOM 362 C SER 73 53.458 49.725 91.404 1.00 9.06 C ATOM 363 O SER 73 53.298 50.775 91.796 1.00 9.50 O ATOM 364 CB SER 73 52.518 48.839 89.222 1.00 9.99 C ATOM 365 N SER 74 53.339 48.920 92.192 1.00 8.58 N ATOM 366 CA SER 74 53.033 49.162 93.627 1.00 8.44 C ATOM 367 C SER 74 54.192 49.675 94.468 1.00 7.63 C ATOM 368 O SER 74 54.120 49.997 95.571 1.00 7.58 O ATOM 369 CB SER 74 52.381 47.948 94.307 1.00 9.02 C ATOM 370 N GLY 75 55.263 49.744 93.918 1.00 7.27 N ATOM 371 CA GLY 75 56.507 50.207 94.554 1.00 6.79 C ATOM 372 C GLY 75 57.637 49.295 93.991 1.00 6.61 C ATOM 373 O GLY 75 57.668 48.163 93.992 1.00 6.49 O ATOM 375 N THR 76 58.567 49.819 93.525 1.00 6.91 N ATOM 376 CA THR 76 59.750 49.101 92.941 1.00 7.19 C ATOM 377 C THR 76 60.712 48.743 94.123 1.00 7.21 C ATOM 378 O THR 76 61.268 47.758 94.292 1.00 7.41 O ATOM 379 CB THR 76 60.382 49.902 91.791 1.00 7.79 C ATOM 380 N ALA 77 60.894 49.571 94.931 1.00 7.31 N ATOM 381 CA ALA 77 61.789 49.412 96.127 1.00 7.71 C ATOM 382 C ALA 77 61.307 48.457 97.246 1.00 7.29 C ATOM 383 O ALA 77 61.885 48.132 98.167 1.00 7.61 O ATOM 384 CB ALA 77 61.888 50.829 96.839 1.00 8.53 C ATOM 385 N ALA 78 60.223 48.046 97.142 1.00 6.76 N ATOM 386 CA ALA 78 59.602 47.121 98.117 1.00 6.52 C ATOM 387 C ALA 78 60.043 45.670 97.886 1.00 5.99 C ATOM 388 O ALA 78 60.059 44.865 98.637 1.00 6.04 O ATOM 389 CB ALA 78 58.039 47.261 98.006 1.00 6.51 C ATOM 390 N PHE 79 60.387 45.361 96.804 1.00 5.79 N ATOM 391 CA PHE 79 60.850 44.020 96.395 1.00 5.72 C ATOM 392 C PHE 79 62.380 44.018 96.666 1.00 6.40 C ATOM 393 O PHE 79 62.934 43.379 97.400 1.00 6.73 O ATOM 394 CB PHE 79 60.562 43.601 94.976 1.00 5.71 C ATOM 395 N TYR 80 63.024 44.764 96.065 1.00 6.85 N ATOM 396 CA TYR 80 64.508 44.902 96.188 1.00 7.78 C ATOM 397 C TYR 80 64.966 45.208 97.632 1.00 8.22 C ATOM 398 O TYR 80 65.891 44.838 98.132 1.00 8.95 O ATOM 399 CB TYR 80 64.967 46.035 95.258 1.00 8.34 C ATOM 400 N ARG 81 64.290 45.902 98.279 1.00 7.92 N ATOM 401 CA ARG 81 64.573 46.301 99.683 1.00 8.51 C ATOM 402 C ARG 81 63.801 45.321 100.635 1.00 8.33 C ATOM 403 O ARG 81 64.082 45.014 101.659 1.00 8.60 O ATOM 404 CB ARG 81 64.160 47.741 99.834 1.00 8.56 C ATOM 405 N ASP 82 62.822 44.855 100.248 1.00 8.08 N ATOM 406 CA ASP 82 61.959 43.901 101.025 1.00 8.10 C ATOM 407 C ASP 82 61.140 44.687 102.104 1.00 7.72 C ATOM 408 O ASP 82 60.904 44.378 103.157 1.00 7.72 O ATOM 409 CB ASP 82 62.734 42.805 101.658 1.00 8.46 C ATOM 410 N ASP 83 60.714 45.720 101.795 1.00 7.66 N ATOM 411 CA ASP 83 59.925 46.609 102.693 1.00 7.62 C ATOM 412 C ASP 83 58.469 46.693 102.163 1.00 6.55 C ATOM 413 O ASP 83 58.086 47.371 101.353 1.00 6.61 O ATOM 414 CB ASP 83 60.553 48.016 102.725 1.00 8.60 C ATOM 415 N LYS 84 57.678 45.994 102.637 1.00 5.79 N ATOM 416 CA LYS 84 56.258 45.932 102.267 1.00 4.93 C ATOM 417 C LYS 84 56.006 44.824 101.215 1.00 4.08 C ATOM 418 O LYS 84 55.464 44.913 100.257 1.00 3.91 O ATOM 419 CB LYS 84 55.762 47.333 101.832 1.00 5.15 C ATOM 420 N ILE 85 56.386 43.794 101.419 1.00 4.01 N ATOM 421 CA ILE 85 56.240 42.626 100.541 1.00 3.88 C ATOM 422 C ILE 85 54.733 42.220 100.521 1.00 3.46 C ATOM 423 O ILE 85 54.235 41.691 99.745 1.00 3.84 O ATOM 424 CB ILE 85 57.062 41.439 100.896 1.00 4.81 C ATOM 425 N TRP 86 54.024 42.497 101.407 1.00 3.22 N ATOM 426 CA TRP 86 52.570 42.185 101.552 1.00 3.62 C ATOM 427 C TRP 86 51.763 43.237 100.718 1.00 3.72 C ATOM 428 O TRP 86 51.643 44.408 100.930 1.00 3.81 O ATOM 429 CB TRP 86 52.162 42.051 102.978 1.00 3.81 C ATOM 430 N SER 87 51.213 42.790 99.782 1.00 4.17 N ATOM 431 CA SER 87 50.414 43.640 98.872 1.00 4.73 C ATOM 432 C SER 87 51.354 44.267 97.833 1.00 4.63 C ATOM 433 O SER 87 51.340 45.359 97.476 1.00 5.04 O ATOM 434 CB SER 87 49.636 44.716 99.599 1.00 5.10 C ATOM 435 N SER 88 52.151 43.564 97.348 1.00 4.23 N ATOM 436 CA SER 88 53.145 43.987 96.338 1.00 4.15 C ATOM 437 C SER 88 52.977 43.282 94.970 1.00 4.30 C ATOM 438 O SER 88 52.769 42.187 94.807 1.00 4.20 O ATOM 439 CB SER 88 54.561 43.824 96.973 1.00 3.62 C ATOM 440 N TYR 89 53.058 43.958 94.016 1.00 4.76 N ATOM 441 CA TYR 89 52.941 43.461 92.631 1.00 5.08 C ATOM 442 C TYR 89 54.277 43.700 91.857 1.00 4.79 C ATOM 443 O TYR 89 54.667 44.677 91.459 1.00 5.11 O ATOM 444 CB TYR 89 51.789 44.152 91.912 1.00 6.17 C ATOM 445 N THR 90 54.937 42.773 91.675 1.00 4.33 N ATOM 446 CA THR 90 56.251 42.805 90.965 1.00 4.01 C ATOM 447 C THR 90 56.380 41.921 89.719 1.00 4.30 C ATOM 448 O THR 90 56.243 40.807 89.663 1.00 4.33 O ATOM 449 CB THR 90 57.329 42.345 92.061 1.00 3.14 C ATOM 450 N GLU 91 56.623 42.472 88.717 1.00 4.69 N ATOM 451 CA GLU 91 56.783 41.799 87.427 1.00 5.07 C ATOM 452 C GLU 91 58.285 41.909 87.031 1.00 4.52 C ATOM 453 O GLU 91 58.814 42.788 86.720 1.00 4.65 O ATOM 454 CB GLU 91 55.997 42.389 86.229 1.00 6.19 C ATOM 455 N TYR 92 58.936 40.972 87.025 1.00 4.09 N ATOM 456 CA TYR 92 60.387 40.897 86.672 1.00 3.54 C ATOM 457 C TYR 92 60.648 40.247 85.315 1.00 3.99 C ATOM 458 O TYR 92 60.369 39.155 84.969 1.00 4.32 O ATOM 459 CB TYR 92 61.195 40.272 87.816 1.00 2.61 C ATOM 460 N ILE 93 61.195 40.963 84.549 1.00 4.19 N ATOM 461 CA ILE 93 61.532 40.526 83.202 1.00 4.66 C ATOM 462 C ILE 93 63.066 40.263 83.011 1.00 3.96 C ATOM 463 O ILE 93 63.907 41.021 83.133 1.00 3.85 O ATOM 464 CB ILE 93 61.145 41.650 82.248 1.00 5.76 C ATOM 465 N PHE 94 63.375 39.167 82.715 1.00 3.75 N ATOM 466 CA PHE 94 64.796 38.717 82.496 1.00 3.18 C ATOM 467 C PHE 94 64.963 38.444 80.957 1.00 3.64 C ATOM 468 O PHE 94 64.293 37.837 80.292 1.00 4.24 O ATOM 469 CB PHE 94 65.079 37.478 83.351 1.00 2.84 C ATOM 470 N PHE 95 65.867 38.918 80.433 1.00 3.55 N ATOM 471 CA PHE 95 66.194 38.771 78.994 1.00 3.99 C ATOM 472 C PHE 95 67.623 38.157 78.811 1.00 3.38 C ATOM 473 O PHE 95 68.555 38.410 79.380 1.00 3.07 O ATOM 474 CB PHE 95 66.075 40.019 78.171 1.00 4.85 C ATOM 475 N ARG 96 67.750 37.355 78.000 1.00 3.48 N ATOM 476 CA ARG 96 69.040 36.663 77.692 1.00 3.09 C ATOM 477 C ARG 96 69.244 36.748 76.149 1.00 3.53 C ATOM 478 O ARG 96 68.486 36.497 75.359 1.00 4.18 O ATOM 479 CB ARG 96 68.984 35.157 78.098 1.00 3.25 C ATOM 480 N PRO 97 70.299 37.112 75.770 1.00 3.33 N ATOM 481 CA PRO 97 70.689 37.258 74.340 1.00 3.81 C ATOM 482 O PRO 97 70.827 38.887 72.580 1.00 4.11 O ATOM 483 CB PRO 97 72.131 36.921 74.308 1.00 3.96 C TER 483 CB PRO T 97 END