####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 333), selected 41 , name T0955TS476_4 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS476_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 1 - 21 4.97 17.55 LCS_AVERAGE: 46.40 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 1 - 16 1.77 20.50 LCS_AVERAGE: 24.09 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 2 - 12 0.82 22.09 LCS_AVERAGE: 15.47 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 16 21 3 3 4 7 9 13 16 16 17 18 19 19 19 19 23 23 25 25 25 26 LCS_GDT Q 2 Q 2 11 16 21 7 8 11 11 14 15 16 16 17 18 19 19 19 19 23 23 25 25 25 25 LCS_GDT E 3 E 3 11 16 21 7 10 12 14 14 15 16 16 17 18 19 19 19 19 23 23 25 25 25 26 LCS_GDT T 4 T 4 11 16 21 7 10 12 14 14 15 16 16 17 18 19 19 19 19 23 23 25 25 25 26 LCS_GDT R 5 R 5 11 16 21 7 10 12 14 14 15 16 16 17 18 19 19 19 19 23 23 25 25 25 26 LCS_GDT K 6 K 6 11 16 21 7 10 12 14 14 15 16 16 17 18 19 19 19 19 23 23 25 25 25 26 LCS_GDT K 7 K 7 11 16 21 7 10 12 14 14 15 16 16 17 18 19 19 19 19 23 23 25 25 25 26 LCS_GDT C 8 C 8 11 16 21 7 10 12 14 14 15 16 16 17 18 19 19 19 19 23 23 25 25 25 26 LCS_GDT T 9 T 9 11 16 21 5 10 12 14 14 15 16 16 17 18 19 19 19 19 23 23 25 26 28 29 LCS_GDT E 10 E 10 11 16 21 4 10 12 14 14 15 16 16 17 18 19 19 19 19 23 23 25 26 28 29 LCS_GDT M 11 M 11 11 16 21 5 10 12 14 14 15 16 16 17 18 19 19 19 19 23 23 25 26 28 29 LCS_GDT K 12 K 12 11 16 21 5 10 12 14 14 15 16 16 17 18 19 19 19 20 23 23 25 26 28 29 LCS_GDT K 13 K 13 10 16 21 4 8 10 14 14 15 16 16 17 18 19 19 19 20 23 23 25 26 28 29 LCS_GDT K 14 K 14 10 16 21 4 8 12 14 14 15 16 16 17 18 19 19 19 20 23 23 25 26 28 29 LCS_GDT F 15 F 15 10 16 21 4 8 12 14 14 15 16 16 17 18 19 19 19 20 23 23 25 26 28 29 LCS_GDT K 16 K 16 10 16 21 4 5 10 14 14 15 16 16 17 18 19 19 19 20 23 23 25 26 28 29 LCS_GDT N 17 N 17 4 11 21 4 4 5 7 9 11 12 15 17 18 19 19 19 20 23 23 25 26 28 29 LCS_GDT C 18 C 18 4 9 21 4 4 5 7 9 11 12 14 17 18 19 19 19 20 23 23 25 26 28 29 LCS_GDT E 19 E 19 3 9 21 3 3 5 7 9 10 12 14 17 18 19 19 19 19 23 23 25 26 28 29 LCS_GDT V 20 V 20 3 4 21 3 3 3 4 4 5 6 9 11 12 14 16 17 20 23 23 25 26 28 29 LCS_GDT R 21 R 21 3 3 21 3 3 5 5 5 9 9 10 11 12 14 16 17 20 23 23 25 26 28 29 LCS_GDT C 22 C 22 4 8 18 1 4 5 7 7 9 9 10 11 12 14 16 17 20 23 23 25 26 28 29 LCS_GDT D 23 D 23 4 8 18 3 4 5 5 7 9 9 10 11 12 14 16 17 20 23 23 25 26 28 29 LCS_GDT E 24 E 24 4 8 18 3 3 4 7 7 9 9 10 11 12 14 16 17 20 23 23 25 26 28 29 LCS_GDT S 25 S 25 4 8 18 3 4 4 7 7 9 9 10 11 12 14 16 17 20 23 23 25 26 28 29 LCS_GDT N 26 N 26 4 8 18 3 3 4 7 7 9 9 10 11 12 14 16 17 20 23 23 25 25 28 29 LCS_GDT H 27 H 27 4 8 18 4 4 4 4 5 6 9 10 11 11 12 15 16 18 19 23 24 25 26 29 LCS_GDT C 28 C 28 4 8 18 4 4 5 7 7 9 9 10 11 12 14 16 17 20 23 23 25 26 28 29 LCS_GDT V 29 V 29 4 8 18 4 4 5 7 7 9 9 10 11 12 14 16 17 20 23 23 25 26 28 29 LCS_GDT E 30 E 30 4 5 18 4 4 4 5 5 8 9 10 11 12 14 16 17 20 23 23 25 26 28 29 LCS_GDT V 31 V 31 3 3 18 1 4 4 4 4 5 7 9 11 12 14 16 17 18 23 23 25 26 28 29 LCS_GDT R 32 R 32 3 4 18 3 4 4 4 4 5 6 8 11 12 14 16 17 20 23 23 25 26 28 29 LCS_GDT C 33 C 33 5 5 18 3 4 5 5 5 5 6 8 11 12 14 16 17 20 23 23 25 26 28 29 LCS_GDT S 34 S 34 5 5 18 3 4 5 5 5 5 6 6 7 10 14 16 17 19 23 23 25 26 28 29 LCS_GDT D 35 D 35 5 5 18 3 4 5 5 5 5 6 8 10 12 14 16 17 19 23 23 25 26 28 29 LCS_GDT T 36 T 36 5 5 18 3 4 5 5 5 5 6 8 11 12 14 16 17 20 23 23 25 26 28 29 LCS_GDT K 37 K 37 5 5 18 3 4 5 7 7 9 9 10 11 12 14 16 17 20 23 23 25 26 28 29 LCS_GDT Y 38 Y 38 3 3 18 0 3 3 3 4 5 6 6 11 11 12 13 15 18 20 23 24 25 26 27 LCS_GDT T 39 T 39 3 3 11 3 3 3 3 4 5 5 6 7 9 10 12 13 14 17 17 20 21 22 24 LCS_GDT L 40 L 40 3 3 11 3 3 3 3 3 3 4 4 7 9 10 12 13 13 17 18 20 21 22 24 LCS_GDT C 41 C 41 3 3 11 3 3 3 3 3 3 4 4 6 9 10 12 13 13 17 18 19 21 22 24 LCS_AVERAGE LCS_A: 28.65 ( 15.47 24.09 46.40 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 12 14 14 15 16 16 17 18 19 19 19 20 23 23 25 26 28 29 GDT PERCENT_AT 17.07 24.39 29.27 34.15 34.15 36.59 39.02 39.02 41.46 43.90 46.34 46.34 46.34 48.78 56.10 56.10 60.98 63.41 68.29 70.73 GDT RMS_LOCAL 0.32 0.71 1.20 1.38 1.38 1.54 1.77 1.77 2.44 2.88 3.21 3.21 3.21 5.68 5.39 5.39 5.82 6.57 6.86 7.04 GDT RMS_ALL_AT 22.89 21.88 20.67 20.43 20.43 20.66 20.50 20.50 19.92 19.11 18.56 18.56 18.56 13.97 15.18 15.18 14.67 13.43 13.19 13.28 # Checking swapping # possible swapping detected: E 19 E 19 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 3.409 0 0.089 0.684 5.840 12.727 10.303 5.795 LGA Q 2 Q 2 2.585 0 0.201 0.987 4.736 41.818 23.232 4.495 LGA E 3 E 3 0.789 0 0.063 0.734 3.677 86.818 67.677 1.107 LGA T 4 T 4 0.572 0 0.071 0.209 1.050 86.364 82.078 0.638 LGA R 5 R 5 0.953 0 0.231 1.225 6.317 70.000 45.124 6.317 LGA K 6 K 6 1.362 0 0.117 1.176 5.364 61.818 45.051 5.364 LGA K 7 K 7 1.152 0 0.106 0.697 3.623 55.000 45.657 3.623 LGA C 8 C 8 1.709 0 0.045 0.889 5.050 54.545 42.727 5.050 LGA T 9 T 9 1.668 0 0.059 0.105 1.683 50.909 50.909 1.582 LGA E 10 E 10 1.451 0 0.125 1.013 4.753 61.818 37.778 3.907 LGA M 11 M 11 0.977 0 0.146 1.405 6.840 82.273 55.909 6.840 LGA K 12 K 12 1.481 0 0.026 0.834 3.902 58.182 46.263 3.193 LGA K 13 K 13 2.427 0 0.178 1.018 4.403 38.636 32.727 4.403 LGA K 14 K 14 1.949 0 0.073 0.530 3.298 47.727 37.778 2.246 LGA F 15 F 15 1.170 0 0.513 1.437 7.802 52.273 27.107 7.802 LGA K 16 K 16 2.151 0 0.038 1.090 7.971 23.636 15.354 7.291 LGA N 17 N 17 8.137 0 0.056 0.575 11.012 0.000 0.000 11.012 LGA C 18 C 18 9.094 0 0.576 0.805 9.847 0.000 0.000 6.078 LGA E 19 E 19 9.965 0 0.554 1.073 13.042 0.000 0.000 9.838 LGA V 20 V 20 13.205 0 0.542 0.985 15.824 0.000 0.000 12.524 LGA R 21 R 21 19.349 0 0.675 0.803 28.671 0.000 0.000 28.054 LGA C 22 C 22 21.519 0 0.422 0.732 25.137 0.000 0.000 19.229 LGA D 23 D 23 26.086 0 0.336 0.804 27.113 0.000 0.000 27.113 LGA E 24 E 24 29.931 0 0.627 0.841 34.349 0.000 0.000 32.543 LGA S 25 S 25 35.950 0 0.613 0.855 38.104 0.000 0.000 36.859 LGA N 26 N 26 38.830 0 0.166 1.085 39.386 0.000 0.000 35.657 LGA H 27 H 27 35.532 0 0.690 1.381 36.374 0.000 0.000 35.844 LGA C 28 C 28 31.396 0 0.047 0.908 34.378 0.000 0.000 34.378 LGA V 29 V 29 25.164 0 0.650 1.270 26.966 0.000 0.000 21.486 LGA E 30 E 30 25.687 0 0.595 1.058 26.427 0.000 0.000 26.386 LGA V 31 V 31 25.289 0 0.588 0.610 26.190 0.000 0.000 25.090 LGA R 32 R 32 23.992 0 0.587 1.213 27.127 0.000 0.000 26.100 LGA C 33 C 33 18.880 0 0.208 0.940 21.196 0.000 0.000 15.864 LGA S 34 S 34 22.849 0 0.138 0.795 27.121 0.000 0.000 22.326 LGA D 35 D 35 27.182 0 0.182 1.160 29.023 0.000 0.000 25.975 LGA T 36 T 36 25.252 0 0.601 0.886 25.695 0.000 0.000 21.333 LGA K 37 K 37 26.259 0 0.555 1.185 32.082 0.000 0.000 32.082 LGA Y 38 Y 38 30.097 0 0.692 1.403 32.236 0.000 0.000 23.766 LGA T 39 T 39 33.170 0 0.609 1.002 36.478 0.000 0.000 34.007 LGA L 40 L 40 28.955 0 0.617 1.215 30.184 0.000 0.000 22.682 LGA C 41 C 41 31.692 2 0.049 0.756 31.963 0.000 0.000 30.684 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 163 99.39 335 333 99.40 41 41 SUMMARY(RMSD_GDC): 11.255 11.103 11.604 21.574 16.236 7.007 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 16 1.77 38.415 35.259 0.857 LGA_LOCAL RMSD: 1.767 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 20.504 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 11.255 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.586349 * X + 0.798028 * Y + 0.139091 * Z + -40.282257 Y_new = 0.680383 * X + -0.578358 * Y + 0.450090 * Z + -10.523820 Z_new = 0.439629 * X + -0.169275 * Y + -0.882084 * Z + 26.630112 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.859495 -0.455186 -2.951994 [DEG: 49.2454 -26.0802 -169.1368 ] ZXZ: 2.841873 2.651064 1.938341 [DEG: 162.8273 151.8948 111.0587 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS476_4 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS476_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 16 1.77 35.259 11.26 REMARK ---------------------------------------------------------- MOLECULE T0955TS476_4 PFRMAT TS TARGET T0955 MODEL 4 PARENT N/A ATOM 1 N SER 1 -3.101 -12.046 1.005 1.00 0.63 ATOM 2 CA SER 1 -1.815 -12.746 1.151 1.00 0.63 ATOM 3 C SER 1 -0.888 -11.919 2.031 1.00 0.63 ATOM 4 O SER 1 -1.025 -10.698 2.034 1.00 0.63 ATOM 5 CB SER 1 -1.223 -12.969 -0.238 1.00 0.63 ATOM 6 OG SER 1 -0.704 -11.778 -0.785 1.00 0.63 ATOM 7 N GLN 2 0.026 -12.509 2.803 1.00 0.56 ATOM 8 CA GLN 2 0.877 -11.668 3.621 1.00 0.56 ATOM 9 C GLN 2 1.854 -10.881 2.758 1.00 0.56 ATOM 10 O GLN 2 2.198 -9.764 3.139 1.00 0.56 ATOM 11 CB GLN 2 1.564 -12.350 4.800 1.00 0.56 ATOM 12 CG GLN 2 2.376 -11.468 5.745 1.00 0.56 ATOM 13 CD GLN 2 1.799 -10.168 6.285 1.00 0.56 ATOM 14 OE1 GLN 2 0.669 -9.753 6.042 1.00 0.56 ATOM 15 NE2 GLN 2 2.565 -9.361 7.023 1.00 0.56 ATOM 16 N GLU 3 2.251 -11.311 1.559 1.00 0.54 ATOM 17 CA GLU 3 2.985 -10.454 0.648 1.00 0.54 ATOM 18 C GLU 3 2.184 -9.280 0.103 1.00 0.54 ATOM 19 O GLU 3 2.791 -8.218 -0.017 1.00 0.54 ATOM 20 CB GLU 3 3.675 -11.252 -0.454 1.00 0.54 ATOM 21 CG GLU 3 2.740 -11.866 -1.493 1.00 0.54 ATOM 22 CD GLU 3 1.985 -13.118 -1.072 1.00 0.54 ATOM 23 OE1 GLU 3 2.103 -13.585 0.082 1.00 0.54 ATOM 24 OE2 GLU 3 1.209 -13.574 -1.939 1.00 0.54 ATOM 25 N THR 4 0.891 -9.365 -0.220 1.00 0.42 ATOM 26 CA THR 4 0.088 -8.233 -0.636 1.00 0.42 ATOM 27 C THR 4 0.049 -7.227 0.507 1.00 0.42 ATOM 28 O THR 4 0.412 -6.066 0.333 1.00 0.42 ATOM 29 CB THR 4 -1.333 -8.441 -1.153 1.00 0.42 ATOM 30 OG1 THR 4 -1.740 -7.219 -1.727 1.00 0.42 ATOM 31 CG2 THR 4 -2.439 -8.742 -0.145 1.00 0.42 ATOM 32 N ARG 5 -0.231 -7.709 1.720 1.00 0.38 ATOM 33 CA ARG 5 -0.186 -6.876 2.905 1.00 0.38 ATOM 34 C ARG 5 1.240 -6.372 3.078 1.00 0.38 ATOM 35 O ARG 5 1.431 -5.204 2.750 1.00 0.38 ATOM 36 CB ARG 5 -0.724 -7.619 4.125 1.00 0.38 ATOM 37 CG ARG 5 -2.201 -7.942 3.920 1.00 0.38 ATOM 38 CD ARG 5 -2.820 -8.645 5.125 1.00 0.38 ATOM 39 NE ARG 5 -2.000 -9.762 5.594 1.00 0.38 ATOM 40 CZ ARG 5 -2.147 -11.057 5.281 1.00 0.38 ATOM 41 NH1 ARG 5 -2.945 -11.467 4.287 1.00 0.38 ATOM 42 NH2 ARG 5 -1.489 -11.947 6.036 1.00 0.38 ATOM 43 N LYS 6 2.305 -7.124 3.367 1.00 0.47 ATOM 44 CA LYS 6 3.679 -6.666 3.355 1.00 0.47 ATOM 45 C LYS 6 4.072 -5.663 2.278 1.00 0.47 ATOM 46 O LYS 6 4.953 -4.883 2.632 1.00 0.47 ATOM 47 CB LYS 6 4.647 -7.844 3.282 1.00 0.47 ATOM 48 CG LYS 6 4.770 -8.839 4.434 1.00 0.47 ATOM 49 CD LYS 6 5.581 -10.053 3.990 1.00 0.47 ATOM 50 CE LYS 6 5.631 -11.366 4.765 1.00 0.47 ATOM 51 NZ LYS 6 5.693 -11.269 6.232 1.00 0.47 ATOM 52 N LYS 7 3.559 -5.584 1.047 1.00 0.48 ATOM 53 CA LYS 7 3.797 -4.617 -0.007 1.00 0.48 ATOM 54 C LYS 7 2.823 -3.455 -0.154 1.00 0.48 ATOM 55 O LYS 7 3.090 -2.430 -0.781 1.00 0.48 ATOM 56 CB LYS 7 4.017 -5.244 -1.381 1.00 0.48 ATOM 57 CG LYS 7 2.703 -5.591 -2.075 1.00 0.48 ATOM 58 CD LYS 7 2.812 -6.191 -3.473 1.00 0.48 ATOM 59 CE LYS 7 3.623 -7.481 -3.564 1.00 0.48 ATOM 60 NZ LYS 7 3.012 -8.595 -2.823 1.00 0.48 ATOM 61 N CYS 8 1.619 -3.532 0.420 1.00 0.22 ATOM 62 CA CYS 8 0.636 -2.471 0.519 1.00 0.22 ATOM 63 C CYS 8 0.722 -1.837 1.900 1.00 0.22 ATOM 64 O CYS 8 0.648 -0.626 2.096 1.00 0.22 ATOM 65 CB CYS 8 -0.718 -3.084 0.173 1.00 0.22 ATOM 66 SG CYS 8 -0.621 -3.833 -1.473 1.00 0.22 ATOM 67 N THR 9 1.030 -2.678 2.890 1.00 0.30 ATOM 68 CA THR 9 1.698 -2.461 4.158 1.00 0.30 ATOM 69 C THR 9 3.101 -1.908 3.955 1.00 0.30 ATOM 70 O THR 9 3.397 -1.030 4.762 1.00 0.30 ATOM 71 CB THR 9 1.742 -3.677 5.080 1.00 0.30 ATOM 72 OG1 THR 9 0.462 -4.235 5.279 1.00 0.30 ATOM 73 CG2 THR 9 2.185 -3.370 6.507 1.00 0.30 ATOM 74 N GLU 10 3.998 -2.269 3.035 1.00 0.32 ATOM 75 CA GLU 10 5.262 -1.570 2.911 1.00 0.32 ATOM 76 C GLU 10 4.999 -0.090 2.675 1.00 0.32 ATOM 77 O GLU 10 5.328 0.732 3.527 1.00 0.32 ATOM 78 CB GLU 10 6.281 -2.131 1.923 1.00 0.32 ATOM 79 CG GLU 10 6.062 -1.898 0.431 1.00 0.32 ATOM 80 CD GLU 10 6.535 -0.545 -0.080 1.00 0.32 ATOM 81 OE1 GLU 10 7.431 0.061 0.545 1.00 0.32 ATOM 82 OE2 GLU 10 5.992 -0.042 -1.087 1.00 0.32 ATOM 83 N MET 11 4.252 0.258 1.624 1.00 0.19 ATOM 84 CA MET 11 3.942 1.651 1.373 1.00 0.19 ATOM 85 C MET 11 3.126 2.242 2.515 1.00 0.19 ATOM 86 O MET 11 3.592 3.255 3.032 1.00 0.19 ATOM 87 CB MET 11 3.362 1.841 -0.025 1.00 0.19 ATOM 88 CG MET 11 2.244 0.876 -0.404 1.00 0.19 ATOM 89 SD MET 11 0.647 1.637 -0.786 1.00 0.19 ATOM 90 CE MET 11 0.319 2.573 0.727 1.00 0.19 ATOM 91 N LYS 12 2.067 1.689 3.112 1.00 0.33 ATOM 92 CA LYS 12 1.350 2.371 4.171 1.00 0.33 ATOM 93 C LYS 12 2.087 2.355 5.504 1.00 0.33 ATOM 94 O LYS 12 1.985 3.321 6.257 1.00 0.33 ATOM 95 CB LYS 12 -0.117 1.974 4.308 1.00 0.33 ATOM 96 CG LYS 12 -0.255 0.562 4.869 1.00 0.33 ATOM 97 CD LYS 12 -1.541 -0.177 4.513 1.00 0.33 ATOM 98 CE LYS 12 -1.528 -1.629 4.982 1.00 0.33 ATOM 99 NZ LYS 12 -1.204 -1.760 6.411 1.00 0.33 ATOM 100 N LYS 13 2.906 1.356 5.841 1.00 0.34 ATOM 101 CA LYS 13 3.748 1.262 7.017 1.00 0.34 ATOM 102 C LYS 13 5.069 2.008 6.885 1.00 0.34 ATOM 103 O LYS 13 5.703 2.173 7.925 1.00 0.34 ATOM 104 CB LYS 13 3.980 -0.140 7.573 1.00 0.34 ATOM 105 CG LYS 13 5.247 -0.841 7.089 1.00 0.34 ATOM 106 CD LYS 13 5.416 -2.320 7.423 1.00 0.34 ATOM 107 CE LYS 13 5.732 -3.092 6.146 1.00 0.34 ATOM 108 NZ LYS 13 6.085 -4.502 6.380 1.00 0.34 ATOM 109 N LYS 14 5.521 2.412 5.694 1.00 0.31 ATOM 110 CA LYS 14 6.747 3.128 5.404 1.00 0.31 ATOM 111 C LYS 14 6.489 4.558 4.951 1.00 0.31 ATOM 112 O LYS 14 7.140 5.464 5.467 1.00 0.31 ATOM 113 CB LYS 14 7.643 2.391 4.412 1.00 0.31 ATOM 114 CG LYS 14 8.028 0.974 4.824 1.00 0.31 ATOM 115 CD LYS 14 8.582 0.204 3.629 1.00 0.31 ATOM 116 CE LYS 14 8.982 -1.251 3.858 1.00 0.31 ATOM 117 NZ LYS 14 10.160 -1.408 4.725 1.00 0.31 ATOM 118 N PHE 15 5.454 4.786 4.137 1.00 0.12 ATOM 119 CA PHE 15 4.739 6.042 4.035 1.00 0.12 ATOM 120 C PHE 15 4.268 6.434 5.428 1.00 0.12 ATOM 121 O PHE 15 4.604 7.558 5.795 1.00 0.12 ATOM 122 CB PHE 15 3.610 6.075 3.009 1.00 0.12 ATOM 123 CG PHE 15 3.041 7.405 2.578 1.00 0.12 ATOM 124 CD1 PHE 15 3.199 7.876 1.268 1.00 0.12 ATOM 125 CD2 PHE 15 2.264 8.165 3.462 1.00 0.12 ATOM 126 CE1 PHE 15 2.582 9.058 0.842 1.00 0.12 ATOM 127 CE2 PHE 15 1.708 9.388 3.067 1.00 0.12 ATOM 128 CZ PHE 15 1.852 9.836 1.748 1.00 0.12 ATOM 129 N LYS 16 3.691 5.608 6.305 1.00 0.28 ATOM 130 CA LYS 16 3.449 6.040 7.667 1.00 0.28 ATOM 131 C LYS 16 4.695 6.420 8.455 1.00 0.28 ATOM 132 O LYS 16 4.568 7.183 9.410 1.00 0.28 ATOM 133 CB LYS 16 2.467 5.255 8.533 1.00 0.28 ATOM 134 CG LYS 16 3.145 4.076 9.227 1.00 0.28 ATOM 135 CD LYS 16 2.204 3.064 9.875 1.00 0.28 ATOM 136 CE LYS 16 2.873 1.788 10.379 1.00 0.28 ATOM 137 NZ LYS 16 4.287 1.934 10.754 1.00 0.28 ATOM 138 N ASN 17 5.897 5.961 8.099 1.00 0.26 ATOM 139 CA ASN 17 7.103 6.373 8.787 1.00 0.26 ATOM 140 C ASN 17 7.764 7.595 8.166 1.00 0.26 ATOM 141 O ASN 17 8.542 8.235 8.870 1.00 0.26 ATOM 142 CB ASN 17 8.187 5.299 8.795 1.00 0.26 ATOM 143 CG ASN 17 7.672 3.932 9.220 1.00 0.26 ATOM 144 OD1 ASN 17 6.761 3.726 10.018 1.00 0.26 ATOM 145 ND2 ASN 17 8.278 2.930 8.578 1.00 0.26 ATOM 146 N CYS 18 7.532 7.907 6.888 1.00 0.14 ATOM 147 CA CYS 18 7.923 9.181 6.319 1.00 0.14 ATOM 148 C CYS 18 6.826 10.217 6.518 1.00 0.14 ATOM 149 O CYS 18 7.195 11.288 6.995 1.00 0.14 ATOM 150 CB CYS 18 8.486 9.066 4.906 1.00 0.14 ATOM 151 SG CYS 18 7.244 8.567 3.688 1.00 0.14 ATOM 152 N GLU 19 5.522 9.993 6.342 1.00 0.21 ATOM 153 CA GLU 19 4.391 10.865 6.591 1.00 0.21 ATOM 154 C GLU 19 4.188 11.257 8.048 1.00 0.21 ATOM 155 O GLU 19 3.715 12.358 8.321 1.00 0.21 ATOM 156 CB GLU 19 3.055 10.320 6.094 1.00 0.21 ATOM 157 CG GLU 19 2.213 9.549 7.108 1.00 0.21 ATOM 158 CD GLU 19 0.994 8.785 6.611 1.00 0.21 ATOM 159 OE1 GLU 19 0.167 9.400 5.904 1.00 0.21 ATOM 160 OE2 GLU 19 0.788 7.605 6.970 1.00 0.21 ATOM 161 N VAL 20 4.467 10.370 9.007 1.00 0.14 ATOM 162 CA VAL 20 4.459 10.775 10.398 1.00 0.14 ATOM 163 C VAL 20 5.661 11.702 10.512 1.00 0.14 ATOM 164 O VAL 20 5.477 12.905 10.688 1.00 0.14 ATOM 165 CB VAL 20 4.434 9.679 11.460 1.00 0.14 ATOM 166 CG1 VAL 20 3.115 8.919 11.353 1.00 0.14 ATOM 167 CG2 VAL 20 5.656 8.769 11.542 1.00 0.14 ATOM 168 N ARG 21 6.867 11.172 10.295 1.00 0.19 ATOM 169 CA ARG 21 8.130 11.883 10.342 1.00 0.19 ATOM 170 C ARG 21 8.139 13.189 9.560 1.00 0.19 ATOM 171 O ARG 21 9.013 13.984 9.897 1.00 0.19 ATOM 172 CB ARG 21 9.178 10.870 9.887 1.00 0.19 ATOM 173 CG ARG 21 10.617 11.375 9.913 1.00 0.19 ATOM 174 CD ARG 21 11.649 10.348 9.458 1.00 0.19 ATOM 175 NE ARG 21 11.730 9.214 10.378 1.00 0.19 ATOM 176 CZ ARG 21 12.457 9.160 11.503 1.00 0.19 ATOM 177 NH1 ARG 21 13.217 10.177 11.932 1.00 0.19 ATOM 178 NH2 ARG 21 12.496 8.032 12.224 1.00 0.19 ATOM 179 N CYS 22 7.231 13.348 8.594 1.00 0.13 ATOM 180 CA CYS 22 6.619 14.479 7.923 1.00 0.13 ATOM 181 C CYS 22 5.976 15.453 8.900 1.00 0.13 ATOM 182 O CYS 22 6.610 16.371 9.418 1.00 0.13 ATOM 183 CB CYS 22 5.805 14.228 6.657 1.00 0.13 ATOM 184 SG CYS 22 6.831 13.678 5.271 1.00 0.13 ATOM 185 N ASP 23 4.698 15.233 9.218 1.00 0.24 ATOM 186 CA ASP 23 3.944 15.968 10.215 1.00 0.24 ATOM 187 C ASP 23 3.470 15.027 11.314 1.00 0.24 ATOM 188 O ASP 23 2.436 14.373 11.194 1.00 0.24 ATOM 189 CB ASP 23 2.817 16.727 9.517 1.00 0.24 ATOM 190 CG ASP 23 3.079 18.154 9.058 1.00 0.24 ATOM 191 OD1 ASP 23 4.166 18.747 9.238 1.00 0.24 ATOM 192 OD2 ASP 23 2.102 18.707 8.508 1.00 0.24 ATOM 193 N GLU 24 4.225 14.951 12.413 1.00 0.29 ATOM 194 CA GLU 24 3.905 14.372 13.704 1.00 0.29 ATOM 195 C GLU 24 3.772 15.468 14.753 1.00 0.29 ATOM 196 O GLU 24 3.908 16.651 14.448 1.00 0.29 ATOM 197 CB GLU 24 4.748 13.130 13.988 1.00 0.29 ATOM 198 CG GLU 24 6.182 12.848 13.548 1.00 0.29 ATOM 199 CD GLU 24 7.176 12.074 14.401 1.00 0.29 ATOM 200 OE1 GLU 24 6.723 11.443 15.382 1.00 0.29 ATOM 201 OE2 GLU 24 8.354 11.894 14.021 1.00 0.29 ATOM 202 N SER 25 3.613 15.221 16.056 1.00 0.57 ATOM 203 CA SER 25 3.640 16.171 17.153 1.00 0.57 ATOM 204 C SER 25 4.968 16.283 17.890 1.00 0.57 ATOM 205 O SER 25 5.482 15.213 18.211 1.00 0.57 ATOM 206 CB SER 25 2.543 15.819 18.155 1.00 0.57 ATOM 207 OG SER 25 2.517 16.646 19.296 1.00 0.57 ATOM 208 N ASN 26 5.551 17.440 18.217 1.00 0.56 ATOM 209 CA ASN 26 6.765 17.737 18.952 1.00 0.56 ATOM 210 C ASN 26 8.134 17.602 18.299 1.00 0.56 ATOM 211 O ASN 26 9.180 17.661 18.944 1.00 0.56 ATOM 212 CB ASN 26 6.784 17.193 20.379 1.00 0.56 ATOM 213 CG ASN 26 7.009 15.691 20.490 1.00 0.56 ATOM 214 OD1 ASN 26 6.215 14.947 21.061 1.00 0.56 ATOM 215 ND2 ASN 26 8.084 15.132 19.931 1.00 0.56 ATOM 216 N HIS 27 8.234 17.430 16.978 1.00 0.28 ATOM 217 CA HIS 27 9.386 17.453 16.097 1.00 0.28 ATOM 218 C HIS 27 8.911 18.149 14.828 1.00 0.28 ATOM 219 O HIS 27 7.969 18.932 14.932 1.00 0.28 ATOM 220 CB HIS 27 9.980 16.051 15.997 1.00 0.28 ATOM 221 CG HIS 27 8.939 15.064 15.545 1.00 0.28 ATOM 222 ND1 HIS 27 8.121 15.481 14.496 1.00 0.28 ATOM 223 CD2 HIS 27 8.185 14.368 16.454 1.00 0.28 ATOM 224 CE1 HIS 27 6.875 15.305 14.943 1.00 0.28 ATOM 225 NE2 HIS 27 6.876 14.544 16.051 1.00 0.28 ATOM 226 N CYS 28 9.443 17.978 13.615 1.00 0.14 ATOM 227 CA CYS 28 8.937 18.538 12.378 1.00 0.14 ATOM 228 C CYS 28 9.660 18.064 11.124 1.00 0.14 ATOM 229 O CYS 28 10.861 18.321 11.106 1.00 0.14 ATOM 230 CB CYS 28 9.123 20.048 12.500 1.00 0.14 ATOM 231 SG CYS 28 9.066 20.898 10.903 1.00 0.14 ATOM 232 N VAL 29 9.169 17.446 10.046 1.00 0.13 ATOM 233 CA VAL 29 10.031 16.947 8.995 1.00 0.13 ATOM 234 C VAL 29 10.852 17.989 8.248 1.00 0.13 ATOM 235 O VAL 29 11.955 17.625 7.845 1.00 0.13 ATOM 236 CB VAL 29 9.386 16.198 7.833 1.00 0.13 ATOM 237 CG1 VAL 29 8.605 17.028 6.819 1.00 0.13 ATOM 238 CG2 VAL 29 10.198 15.159 7.065 1.00 0.13 ATOM 239 N GLU 30 10.392 19.214 7.988 1.00 0.32 ATOM 240 CA GLU 30 11.227 20.082 7.182 1.00 0.32 ATOM 241 C GLU 30 12.398 20.593 8.008 1.00 0.32 ATOM 242 O GLU 30 13.545 20.590 7.564 1.00 0.32 ATOM 243 CB GLU 30 10.381 21.142 6.483 1.00 0.32 ATOM 244 CG GLU 30 9.538 22.042 7.382 1.00 0.32 ATOM 245 CD GLU 30 8.199 21.498 7.858 1.00 0.32 ATOM 246 OE1 GLU 30 7.849 20.329 7.586 1.00 0.32 ATOM 247 OE2 GLU 30 7.458 22.272 8.502 1.00 0.32 ATOM 248 N VAL 31 12.171 20.874 9.294 1.00 0.20 ATOM 249 CA VAL 31 13.159 21.320 10.255 1.00 0.20 ATOM 250 C VAL 31 13.992 20.148 10.754 1.00 0.20 ATOM 251 O VAL 31 15.216 20.165 10.645 1.00 0.20 ATOM 252 CB VAL 31 12.503 22.059 11.419 1.00 0.20 ATOM 253 CG1 VAL 31 13.505 22.579 12.446 1.00 0.20 ATOM 254 CG2 VAL 31 11.685 23.252 10.932 1.00 0.20 ATOM 255 N ARG 32 13.361 19.066 11.215 1.00 0.23 ATOM 256 CA ARG 32 13.949 17.792 11.577 1.00 0.23 ATOM 257 C ARG 32 14.628 17.162 10.368 1.00 0.23 ATOM 258 O ARG 32 15.793 16.818 10.551 1.00 0.23 ATOM 259 CB ARG 32 12.956 16.818 12.203 1.00 0.23 ATOM 260 CG ARG 32 13.607 15.569 12.790 1.00 0.23 ATOM 261 CD ARG 32 12.667 14.389 13.021 1.00 0.23 ATOM 262 NE ARG 32 12.079 13.935 11.760 1.00 0.23 ATOM 263 CZ ARG 32 12.816 13.620 10.687 1.00 0.23 ATOM 264 NH1 ARG 32 14.019 13.037 10.771 1.00 0.23 ATOM 265 NH2 ARG 32 12.362 13.885 9.454 1.00 0.23 ATOM 266 N CYS 33 14.089 16.950 9.165 1.00 0.18 ATOM 267 CA CYS 33 14.868 16.499 8.030 1.00 0.18 ATOM 268 C CYS 33 16.011 17.458 7.731 1.00 0.18 ATOM 269 O CYS 33 17.038 16.963 7.270 1.00 0.18 ATOM 270 CB CYS 33 14.132 16.167 6.735 1.00 0.18 ATOM 271 SG CYS 33 13.814 17.574 5.641 1.00 0.18 ATOM 272 N SER 34 15.935 18.752 8.051 1.00 0.31 ATOM 273 CA SER 34 17.044 19.670 7.882 1.00 0.31 ATOM 274 C SER 34 18.155 19.588 8.919 1.00 0.31 ATOM 275 O SER 34 19.333 19.598 8.570 1.00 0.31 ATOM 276 CB SER 34 16.560 21.107 7.711 1.00 0.31 ATOM 277 OG SER 34 17.618 22.029 7.841 1.00 0.31 ATOM 278 N ASP 35 17.804 19.483 10.203 1.00 0.38 ATOM 279 CA ASP 35 18.747 19.297 11.288 1.00 0.38 ATOM 280 C ASP 35 19.228 17.855 11.224 1.00 0.38 ATOM 281 O ASP 35 20.413 17.610 11.002 1.00 0.38 ATOM 282 CB ASP 35 18.078 19.626 12.619 1.00 0.38 ATOM 283 CG ASP 35 17.534 21.043 12.739 1.00 0.38 ATOM 284 OD1 ASP 35 18.050 21.971 12.081 1.00 0.38 ATOM 285 OD2 ASP 35 16.608 21.239 13.555 1.00 0.38 ATOM 286 N THR 36 18.299 16.896 11.267 1.00 0.32 ATOM 287 CA THR 36 18.575 15.482 11.111 1.00 0.32 ATOM 288 C THR 36 19.375 15.181 9.851 1.00 0.32 ATOM 289 O THR 36 20.400 14.548 10.097 1.00 0.32 ATOM 290 CB THR 36 17.468 14.452 11.317 1.00 0.32 ATOM 291 OG1 THR 36 16.501 14.412 10.293 1.00 0.32 ATOM 292 CG2 THR 36 16.767 14.516 12.671 1.00 0.32 ATOM 293 N LYS 37 19.115 15.614 8.615 1.00 0.47 ATOM 294 CA LYS 37 19.983 15.373 7.480 1.00 0.47 ATOM 295 C LYS 37 21.430 15.684 7.831 1.00 0.47 ATOM 296 O LYS 37 22.258 14.776 7.853 1.00 0.47 ATOM 297 CB LYS 37 19.587 15.990 6.141 1.00 0.47 ATOM 298 CG LYS 37 19.649 17.512 6.067 1.00 0.47 ATOM 299 CD LYS 37 18.948 18.180 4.888 1.00 0.47 ATOM 300 CE LYS 37 18.739 19.691 4.928 1.00 0.47 ATOM 301 NZ LYS 37 19.552 20.420 5.914 1.00 0.47 ATOM 302 N TYR 38 21.782 16.889 8.288 1.00 0.31 ATOM 303 CA TYR 38 23.155 17.230 8.605 1.00 0.31 ATOM 304 C TYR 38 23.679 16.615 9.895 1.00 0.31 ATOM 305 O TYR 38 24.879 16.682 10.156 1.00 0.31 ATOM 306 CB TYR 38 23.327 18.744 8.514 1.00 0.31 ATOM 307 CG TYR 38 23.011 19.452 7.218 1.00 0.31 ATOM 308 CD1 TYR 38 22.705 20.818 7.232 1.00 0.31 ATOM 309 CD2 TYR 38 23.024 18.790 5.985 1.00 0.31 ATOM 310 CE1 TYR 38 22.388 21.507 6.056 1.00 0.31 ATOM 311 CE2 TYR 38 22.642 19.434 4.801 1.00 0.31 ATOM 312 CZ TYR 38 22.330 20.808 4.834 1.00 0.31 ATOM 313 OH TYR 38 21.761 21.421 3.757 1.00 0.31 ATOM 314 N THR 39 22.862 16.001 10.754 1.00 0.49 ATOM 315 CA THR 39 23.223 15.237 11.933 1.00 0.49 ATOM 316 C THR 39 23.279 13.733 11.697 1.00 0.49 ATOM 317 O THR 39 23.961 13.030 12.440 1.00 0.49 ATOM 318 CB THR 39 22.412 15.636 13.164 1.00 0.49 ATOM 319 OG1 THR 39 21.124 15.059 13.145 1.00 0.49 ATOM 320 CG2 THR 39 22.218 17.123 13.447 1.00 0.49 ATOM 321 N LEU 40 22.631 13.179 10.668 1.00 0.29 ATOM 322 CA LEU 40 22.482 11.808 10.218 1.00 0.29 ATOM 323 C LEU 40 23.303 11.445 8.987 1.00 0.29 ATOM 324 O LEU 40 23.864 10.352 8.936 1.00 0.29 ATOM 325 CB LEU 40 21.024 11.366 10.146 1.00 0.29 ATOM 326 CG LEU 40 20.084 11.783 9.017 1.00 0.29 ATOM 327 CD1 LEU 40 20.203 10.985 7.722 1.00 0.29 ATOM 328 CD2 LEU 40 18.588 11.716 9.311 1.00 0.29 ATOM 329 N CYS 41 23.347 12.274 7.941 1.00 0.38 ATOM 330 CA CYS 41 24.096 12.223 6.701 1.00 0.38 ATOM 331 C CYS 41 24.241 13.536 5.944 1.00 0.38 ATOM 332 CB CYS 41 23.627 11.060 5.829 1.00 0.38 ATOM 333 SG CYS 41 21.976 11.232 5.106 1.00 0.38 TER END