####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 333), selected 41 , name T0955TS476_3 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS476_3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 1 - 23 4.78 14.41 LCS_AVERAGE: 46.10 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 1 - 15 1.79 22.86 LCS_AVERAGE: 20.82 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 2 - 12 0.81 23.10 LCS_AVERAGE: 15.17 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 15 23 3 3 3 6 11 13 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT Q 2 Q 2 11 15 23 4 8 11 12 14 14 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT E 3 E 3 11 15 23 6 9 11 12 14 14 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT T 4 T 4 11 15 23 6 9 11 12 14 14 15 16 18 19 20 20 21 21 21 24 25 26 29 29 LCS_GDT R 5 R 5 11 15 23 6 9 11 12 14 14 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT K 6 K 6 11 15 23 6 9 11 12 14 14 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT K 7 K 7 11 15 23 6 9 11 12 14 14 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT C 8 C 8 11 15 23 5 9 11 12 14 14 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT T 9 T 9 11 15 23 5 9 11 12 14 14 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT E 10 E 10 11 15 23 5 9 11 12 14 14 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT M 11 M 11 11 15 23 6 9 11 12 14 14 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT K 12 K 12 11 15 23 4 8 11 12 14 14 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT K 13 K 13 9 15 23 4 6 9 12 14 14 15 16 16 17 17 19 21 21 22 24 25 26 29 29 LCS_GDT K 14 K 14 9 15 23 4 7 9 12 14 14 15 16 17 18 20 20 21 21 22 24 25 26 29 29 LCS_GDT F 15 F 15 9 15 23 4 8 10 12 14 14 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT K 16 K 16 4 7 23 4 4 6 8 10 13 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT N 17 N 17 5 7 23 4 5 7 10 12 14 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT C 18 C 18 5 7 23 4 5 6 8 10 13 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT E 19 E 19 5 7 23 3 5 6 8 10 13 14 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT V 20 V 20 5 7 23 3 5 5 8 10 13 15 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT R 21 R 21 5 7 23 3 5 5 8 10 13 14 16 18 19 20 20 21 21 22 24 25 26 29 29 LCS_GDT C 22 C 22 3 3 23 3 3 5 5 5 7 9 11 14 15 15 17 19 21 22 24 25 26 29 29 LCS_GDT D 23 D 23 5 5 23 0 3 5 5 5 5 6 8 9 15 15 17 19 21 22 24 25 26 27 28 LCS_GDT E 24 E 24 5 5 20 4 4 5 5 5 5 6 8 9 11 15 17 19 21 22 24 25 26 27 28 LCS_GDT S 25 S 25 5 5 20 4 4 5 5 5 5 6 7 9 11 15 17 19 21 22 24 25 26 27 28 LCS_GDT N 26 N 26 5 5 20 4 4 5 5 5 5 6 8 9 11 15 16 19 21 21 23 25 26 27 28 LCS_GDT H 27 H 27 5 5 20 4 4 5 5 5 5 6 6 10 13 15 16 19 21 21 23 25 25 27 28 LCS_GDT C 28 C 28 3 4 20 3 3 5 5 7 8 9 11 14 15 15 17 19 21 22 24 25 26 29 29 LCS_GDT V 29 V 29 3 4 15 3 3 3 3 4 4 6 8 10 10 14 16 17 19 21 22 25 26 29 29 LCS_GDT E 30 E 30 3 3 10 3 3 3 3 3 4 6 8 9 10 13 16 17 18 19 23 25 26 29 29 LCS_GDT V 31 V 31 3 3 11 3 4 4 4 4 4 5 8 9 10 11 12 14 14 17 21 25 26 29 29 LCS_GDT R 32 R 32 3 4 11 3 4 4 4 5 6 6 7 8 10 11 12 14 14 16 24 25 26 29 29 LCS_GDT C 33 C 33 4 5 11 3 4 4 5 5 6 6 6 8 9 11 12 14 14 16 16 17 19 22 23 LCS_GDT S 34 S 34 4 5 11 3 4 4 5 5 6 6 6 8 8 10 11 12 12 19 24 25 26 29 29 LCS_GDT D 35 D 35 4 5 11 3 4 4 5 5 6 6 7 8 9 11 12 14 14 19 24 25 26 29 29 LCS_GDT T 36 T 36 4 5 11 3 4 4 5 5 5 6 7 8 10 11 12 14 14 16 16 18 19 22 25 LCS_GDT K 37 K 37 4 5 11 3 4 4 5 5 5 6 8 8 10 11 12 14 14 16 16 18 19 25 27 LCS_GDT Y 38 Y 38 3 3 11 0 3 4 4 4 5 5 6 9 10 10 12 14 14 16 16 17 17 20 23 LCS_GDT T 39 T 39 3 3 11 3 3 4 4 4 5 5 5 8 8 10 10 10 11 11 11 13 13 16 17 LCS_GDT L 40 L 40 3 3 11 3 3 3 3 3 3 4 5 8 8 10 10 10 11 11 11 13 13 15 17 LCS_GDT C 41 C 41 3 3 11 3 3 3 3 3 3 4 5 6 8 10 10 10 11 11 11 13 13 14 14 LCS_AVERAGE LCS_A: 27.36 ( 15.17 20.82 46.10 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 9 11 12 14 14 15 16 18 19 20 20 21 21 22 24 25 26 29 29 GDT PERCENT_AT 14.63 21.95 26.83 29.27 34.15 34.15 36.59 39.02 43.90 46.34 48.78 48.78 51.22 51.22 53.66 58.54 60.98 63.41 70.73 70.73 GDT RMS_LOCAL 0.27 0.64 0.81 1.13 1.38 1.38 1.78 1.99 2.98 3.14 3.35 3.35 3.68 3.68 4.72 5.46 5.81 6.02 6.79 6.79 GDT RMS_ALL_AT 21.86 22.75 23.10 22.99 23.00 23.00 22.92 22.78 15.91 15.70 16.03 16.03 16.30 16.30 12.55 13.28 13.02 12.49 11.06 11.06 # Checking swapping # possible swapping detected: E 19 E 19 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 3.667 0 0.682 1.006 7.901 15.000 10.000 7.901 LGA Q 2 Q 2 2.758 0 0.287 1.152 6.778 38.636 18.384 5.577 LGA E 3 E 3 0.601 0 0.161 0.890 4.413 86.818 57.172 4.413 LGA T 4 T 4 0.785 0 0.034 0.299 1.523 86.364 77.662 0.863 LGA R 5 R 5 1.515 0 0.247 0.466 3.549 62.273 35.537 3.513 LGA K 6 K 6 1.542 0 0.111 0.991 3.796 54.545 42.222 3.796 LGA K 7 K 7 0.908 0 0.035 1.152 5.821 73.636 49.293 5.821 LGA C 8 C 8 0.952 0 0.079 0.596 2.725 81.818 70.000 2.725 LGA T 9 T 9 0.930 0 0.127 1.097 3.068 73.636 61.818 2.359 LGA E 10 E 10 0.755 0 0.060 0.650 2.153 81.818 75.758 2.153 LGA M 11 M 11 0.868 0 0.057 1.597 7.383 73.636 51.591 7.383 LGA K 12 K 12 2.230 0 0.146 0.750 4.014 41.364 34.747 4.014 LGA K 13 K 13 3.177 0 0.078 1.047 3.976 22.727 19.192 2.191 LGA K 14 K 14 2.235 0 0.501 1.412 4.601 38.636 37.172 4.601 LGA F 15 F 15 1.334 0 0.350 1.284 9.177 40.000 16.529 8.940 LGA K 16 K 16 5.802 0 0.107 1.297 10.719 4.545 2.020 10.719 LGA N 17 N 17 3.322 0 0.035 1.124 6.201 9.545 22.727 4.241 LGA C 18 C 18 7.626 0 0.151 0.866 8.446 0.000 0.000 7.777 LGA E 19 E 19 11.651 0 0.083 0.490 20.203 0.000 0.000 20.203 LGA V 20 V 20 9.585 0 0.588 0.488 10.699 0.000 0.000 7.641 LGA R 21 R 21 14.018 0 0.577 0.827 20.844 0.000 0.000 19.932 LGA C 22 C 22 17.882 0 0.684 0.712 21.035 0.000 0.000 16.899 LGA D 23 D 23 20.753 0 0.510 0.873 21.743 0.000 0.000 21.743 LGA E 24 E 24 20.998 0 0.047 0.908 24.405 0.000 0.000 19.120 LGA S 25 S 25 27.121 0 0.045 0.584 30.639 0.000 0.000 27.952 LGA N 26 N 26 30.262 0 0.055 1.109 31.606 0.000 0.000 27.792 LGA H 27 H 27 26.990 0 0.531 0.923 29.409 0.000 0.000 29.231 LGA C 28 C 28 25.659 0 0.587 0.615 26.588 0.000 0.000 26.111 LGA V 29 V 29 25.309 0 0.620 0.576 28.291 0.000 0.000 24.267 LGA E 30 E 30 27.828 0 0.640 1.143 29.205 0.000 0.000 29.205 LGA V 31 V 31 25.951 0 0.654 1.421 29.767 0.000 0.000 22.600 LGA R 32 R 32 28.402 0 0.504 1.424 29.341 0.000 0.000 23.907 LGA C 33 C 33 29.934 0 0.231 0.278 31.518 0.000 0.000 28.950 LGA S 34 S 34 32.868 0 0.102 0.248 36.919 0.000 0.000 30.179 LGA D 35 D 35 37.853 0 0.135 0.834 41.144 0.000 0.000 37.949 LGA T 36 T 36 38.885 0 0.608 0.885 38.885 0.000 0.000 37.813 LGA K 37 K 37 39.094 0 0.625 1.577 42.949 0.000 0.000 38.657 LGA Y 38 Y 38 40.793 0 0.672 1.543 40.959 0.000 0.000 31.184 LGA T 39 T 39 41.705 0 0.599 1.198 44.598 0.000 0.000 42.292 LGA L 40 L 40 41.505 0 0.619 1.253 42.417 0.000 0.000 39.013 LGA C 41 C 41 44.740 2 0.041 0.727 45.959 0.000 0.000 44.880 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 163 99.39 335 333 99.40 41 41 SUMMARY(RMSD_GDC): 10.099 10.002 11.006 21.585 16.630 6.430 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 16 1.99 37.195 34.056 0.765 LGA_LOCAL RMSD: 1.992 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 22.783 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 10.099 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.924584 * X + -0.374836 * Y + -0.068139 * Z + -12.819315 Y_new = 0.273637 * X + 0.777815 * Y + -0.565798 * Z + -15.073129 Z_new = 0.265081 * X + 0.504482 * Y + 0.821724 * Z + -36.725136 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.287743 -0.268288 0.550600 [DEG: 16.4865 -15.3718 31.5471 ] ZXZ: -0.119853 0.606367 0.483801 [DEG: -6.8671 34.7423 27.7198 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS476_3 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS476_3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 16 1.99 34.056 10.10 REMARK ---------------------------------------------------------- MOLECULE T0955TS476_3 PFRMAT TS TARGET T0955 MODEL 3 PARENT N/A ATOM 1 N SER 1 -1.751 -13.712 0.593 1.00 0.63 ATOM 2 CA SER 1 -1.742 -12.324 1.078 1.00 0.63 ATOM 3 C SER 1 -0.468 -11.892 1.789 1.00 0.63 ATOM 4 O SER 1 -0.204 -10.693 1.730 1.00 0.63 ATOM 5 CB SER 1 -2.961 -11.993 1.935 1.00 0.63 ATOM 6 OG SER 1 -2.842 -10.816 2.702 1.00 0.63 ATOM 7 N GLN 2 0.350 -12.704 2.464 1.00 0.56 ATOM 8 CA GLN 2 1.714 -12.375 2.827 1.00 0.56 ATOM 9 C GLN 2 2.439 -11.381 1.930 1.00 0.56 ATOM 10 O GLN 2 3.004 -10.441 2.485 1.00 0.56 ATOM 11 CB GLN 2 2.478 -13.676 3.052 1.00 0.56 ATOM 12 CG GLN 2 2.531 -14.649 1.877 1.00 0.56 ATOM 13 CD GLN 2 1.191 -15.110 1.320 1.00 0.56 ATOM 14 OE1 GLN 2 0.266 -15.466 2.048 1.00 0.56 ATOM 15 NE2 GLN 2 0.899 -14.960 0.027 1.00 0.56 ATOM 16 N GLU 3 2.356 -11.415 0.597 1.00 0.53 ATOM 17 CA GLU 3 2.696 -10.376 -0.354 1.00 0.53 ATOM 18 C GLU 3 1.807 -9.144 -0.271 1.00 0.53 ATOM 19 O GLU 3 2.320 -8.068 0.034 1.00 0.53 ATOM 20 CB GLU 3 2.805 -10.799 -1.817 1.00 0.53 ATOM 21 CG GLU 3 3.952 -11.741 -2.176 1.00 0.53 ATOM 22 CD GLU 3 3.933 -12.982 -1.295 1.00 0.53 ATOM 23 OE1 GLU 3 2.843 -13.584 -1.179 1.00 0.53 ATOM 24 OE2 GLU 3 4.910 -13.223 -0.554 1.00 0.53 ATOM 25 N THR 4 0.491 -9.227 -0.484 1.00 0.41 ATOM 26 CA THR 4 -0.388 -8.080 -0.370 1.00 0.41 ATOM 27 C THR 4 -0.311 -7.375 0.976 1.00 0.41 ATOM 28 O THR 4 -0.207 -6.150 0.958 1.00 0.41 ATOM 29 CB THR 4 -1.826 -8.264 -0.847 1.00 0.41 ATOM 30 OG1 THR 4 -2.315 -7.029 -1.318 1.00 0.41 ATOM 31 CG2 THR 4 -2.802 -8.720 0.234 1.00 0.41 ATOM 32 N ARG 5 -0.232 -8.058 2.120 1.00 0.37 ATOM 33 CA ARG 5 0.180 -7.541 3.411 1.00 0.37 ATOM 34 C ARG 5 1.588 -6.973 3.315 1.00 0.37 ATOM 35 O ARG 5 1.637 -5.750 3.207 1.00 0.37 ATOM 36 CB ARG 5 0.046 -8.548 4.550 1.00 0.37 ATOM 37 CG ARG 5 -1.415 -8.776 4.923 1.00 0.37 ATOM 38 CD ARG 5 -1.563 -10.051 5.748 1.00 0.37 ATOM 39 NE ARG 5 -2.907 -10.626 5.688 1.00 0.37 ATOM 40 CZ ARG 5 -3.192 -11.899 5.380 1.00 0.37 ATOM 41 NH1 ARG 5 -2.236 -12.808 5.149 1.00 0.37 ATOM 42 NH2 ARG 5 -4.440 -12.342 5.175 1.00 0.37 ATOM 43 N LYS 6 2.714 -7.691 3.278 1.00 0.44 ATOM 44 CA LYS 6 4.022 -7.071 3.347 1.00 0.44 ATOM 45 C LYS 6 4.280 -5.939 2.362 1.00 0.44 ATOM 46 O LYS 6 5.061 -5.056 2.709 1.00 0.44 ATOM 47 CB LYS 6 5.173 -8.062 3.202 1.00 0.44 ATOM 48 CG LYS 6 5.298 -8.530 1.755 1.00 0.44 ATOM 49 CD LYS 6 6.128 -9.804 1.632 1.00 0.44 ATOM 50 CE LYS 6 6.190 -10.326 0.200 1.00 0.44 ATOM 51 NZ LYS 6 6.398 -9.289 -0.822 1.00 0.44 ATOM 52 N LYS 7 3.659 -5.911 1.180 1.00 0.43 ATOM 53 CA LYS 7 3.747 -4.833 0.217 1.00 0.43 ATOM 54 C LYS 7 2.780 -3.699 0.527 1.00 0.43 ATOM 55 O LYS 7 3.150 -2.537 0.371 1.00 0.43 ATOM 56 CB LYS 7 3.608 -5.342 -1.214 1.00 0.43 ATOM 57 CG LYS 7 2.155 -5.469 -1.663 1.00 0.43 ATOM 58 CD LYS 7 1.959 -6.274 -2.945 1.00 0.43 ATOM 59 CE LYS 7 0.495 -6.502 -3.313 1.00 0.43 ATOM 60 NZ LYS 7 -0.391 -5.427 -2.840 1.00 0.43 ATOM 61 N CYS 8 1.560 -3.993 0.984 1.00 0.21 ATOM 62 CA CYS 8 0.592 -3.000 1.404 1.00 0.21 ATOM 63 C CYS 8 1.001 -2.453 2.765 1.00 0.21 ATOM 64 O CYS 8 1.269 -1.256 2.841 1.00 0.21 ATOM 65 CB CYS 8 -0.880 -3.395 1.322 1.00 0.21 ATOM 66 SG CYS 8 -1.603 -4.256 2.740 1.00 0.21 ATOM 67 N THR 9 1.159 -3.277 3.804 1.00 0.25 ATOM 68 CA THR 9 1.871 -2.966 5.027 1.00 0.25 ATOM 69 C THR 9 3.194 -2.300 4.677 1.00 0.25 ATOM 70 O THR 9 3.314 -1.137 5.054 1.00 0.25 ATOM 71 CB THR 9 1.976 -4.109 6.032 1.00 0.25 ATOM 72 OG1 THR 9 2.909 -5.104 5.677 1.00 0.25 ATOM 73 CG2 THR 9 0.645 -4.813 6.282 1.00 0.25 ATOM 74 N GLU 10 4.128 -2.740 3.830 1.00 0.30 ATOM 75 CA GLU 10 5.278 -1.885 3.616 1.00 0.30 ATOM 76 C GLU 10 4.998 -0.542 2.955 1.00 0.30 ATOM 77 O GLU 10 5.587 0.410 3.464 1.00 0.30 ATOM 78 CB GLU 10 6.521 -2.574 3.057 1.00 0.30 ATOM 79 CG GLU 10 6.573 -2.721 1.539 1.00 0.30 ATOM 80 CD GLU 10 7.491 -3.864 1.131 1.00 0.30 ATOM 81 OE1 GLU 10 8.361 -4.245 1.944 1.00 0.30 ATOM 82 OE2 GLU 10 7.343 -4.388 0.004 1.00 0.30 ATOM 83 N MET 11 4.132 -0.332 1.960 1.00 0.17 ATOM 84 CA MET 11 3.829 0.938 1.331 1.00 0.17 ATOM 85 C MET 11 2.883 1.873 2.073 1.00 0.17 ATOM 86 O MET 11 3.066 3.089 2.051 1.00 0.17 ATOM 87 CB MET 11 3.360 0.772 -0.111 1.00 0.17 ATOM 88 CG MET 11 1.959 0.183 -0.250 1.00 0.17 ATOM 89 SD MET 11 0.503 1.240 -0.049 1.00 0.17 ATOM 90 CE MET 11 -0.734 -0.013 0.374 1.00 0.17 ATOM 91 N LYS 12 1.865 1.343 2.756 1.00 0.34 ATOM 92 CA LYS 12 0.913 2.002 3.628 1.00 0.34 ATOM 93 C LYS 12 1.623 2.277 4.946 1.00 0.34 ATOM 94 O LYS 12 1.728 3.421 5.385 1.00 0.34 ATOM 95 CB LYS 12 -0.426 1.305 3.857 1.00 0.34 ATOM 96 CG LYS 12 -0.472 0.161 4.866 1.00 0.34 ATOM 97 CD LYS 12 -1.596 -0.852 4.672 1.00 0.34 ATOM 98 CE LYS 12 -1.473 -1.979 5.694 1.00 0.34 ATOM 99 NZ LYS 12 -2.749 -2.680 5.903 1.00 0.34 ATOM 100 N LYS 13 2.213 1.230 5.528 1.00 0.22 ATOM 101 CA LYS 13 2.901 1.276 6.803 1.00 0.22 ATOM 102 C LYS 13 4.066 2.243 6.647 1.00 0.22 ATOM 103 O LYS 13 4.478 2.909 7.595 1.00 0.22 ATOM 104 CB LYS 13 3.035 -0.082 7.489 1.00 0.22 ATOM 105 CG LYS 13 2.800 -0.256 8.987 1.00 0.22 ATOM 106 CD LYS 13 3.497 -1.454 9.625 1.00 0.22 ATOM 107 CE LYS 13 3.599 -1.479 11.148 1.00 0.22 ATOM 108 NZ LYS 13 4.953 -1.294 11.692 1.00 0.22 ATOM 109 N LYS 14 4.658 2.488 5.475 1.00 0.30 ATOM 110 CA LYS 14 5.664 3.472 5.130 1.00 0.30 ATOM 111 C LYS 14 5.161 4.659 4.320 1.00 0.30 ATOM 112 O LYS 14 5.455 4.765 3.131 1.00 0.30 ATOM 113 CB LYS 14 6.810 2.780 4.397 1.00 0.30 ATOM 114 CG LYS 14 8.122 3.492 4.080 1.00 0.30 ATOM 115 CD LYS 14 8.961 2.584 3.185 1.00 0.30 ATOM 116 CE LYS 14 10.144 3.284 2.524 1.00 0.30 ATOM 117 NZ LYS 14 9.745 4.232 1.472 1.00 0.30 ATOM 118 N PHE 15 4.482 5.643 4.915 1.00 0.15 ATOM 119 CA PHE 15 4.380 6.961 4.321 1.00 0.15 ATOM 120 C PHE 15 5.516 7.873 4.762 1.00 0.15 ATOM 121 O PHE 15 5.768 8.045 5.953 1.00 0.15 ATOM 122 CB PHE 15 2.993 7.591 4.438 1.00 0.15 ATOM 123 CG PHE 15 1.778 6.735 4.168 1.00 0.15 ATOM 124 CD1 PHE 15 1.571 6.170 2.904 1.00 0.15 ATOM 125 CD2 PHE 15 0.822 6.520 5.169 1.00 0.15 ATOM 126 CE1 PHE 15 0.425 5.410 2.638 1.00 0.15 ATOM 127 CE2 PHE 15 -0.304 5.729 4.917 1.00 0.15 ATOM 128 CZ PHE 15 -0.519 5.181 3.647 1.00 0.15 ATOM 129 N LYS 16 6.212 8.518 3.822 1.00 0.76 ATOM 130 CA LYS 16 7.055 9.691 3.952 1.00 0.76 ATOM 131 C LYS 16 6.502 10.774 4.868 1.00 0.76 ATOM 132 O LYS 16 7.231 11.386 5.645 1.00 0.76 ATOM 133 CB LYS 16 7.376 10.269 2.577 1.00 0.76 ATOM 134 CG LYS 16 6.211 10.737 1.709 1.00 0.76 ATOM 135 CD LYS 16 5.303 9.626 1.188 1.00 0.76 ATOM 136 CE LYS 16 4.186 10.032 0.232 1.00 0.76 ATOM 137 NZ LYS 16 3.196 8.951 0.102 1.00 0.76 ATOM 138 N ASN 17 5.193 11.032 4.796 1.00 0.59 ATOM 139 CA ASN 17 4.457 12.052 5.516 1.00 0.59 ATOM 140 C ASN 17 4.041 11.649 6.923 1.00 0.59 ATOM 141 O ASN 17 3.842 12.508 7.780 1.00 0.59 ATOM 142 CB ASN 17 3.239 12.439 4.682 1.00 0.59 ATOM 143 CG ASN 17 2.460 11.231 4.180 1.00 0.59 ATOM 144 OD1 ASN 17 2.709 10.718 3.092 1.00 0.59 ATOM 145 ND2 ASN 17 1.569 10.655 4.992 1.00 0.59 ATOM 146 N CYS 18 3.841 10.355 7.179 1.00 0.20 ATOM 147 CA CYS 18 3.568 9.782 8.482 1.00 0.20 ATOM 148 C CYS 18 3.952 8.309 8.433 1.00 0.20 ATOM 149 O CYS 18 3.397 7.522 7.670 1.00 0.20 ATOM 150 CB CYS 18 2.129 10.013 8.935 1.00 0.20 ATOM 151 SG CYS 18 0.860 9.360 7.824 1.00 0.20 ATOM 152 N GLU 19 4.985 7.916 9.181 1.00 0.26 ATOM 153 CA GLU 19 5.510 6.568 9.100 1.00 0.26 ATOM 154 C GLU 19 4.556 5.640 9.839 1.00 0.26 ATOM 155 O GLU 19 5.011 5.182 10.885 1.00 0.26 ATOM 156 CB GLU 19 6.970 6.503 9.540 1.00 0.26 ATOM 157 CG GLU 19 7.572 5.138 9.219 1.00 0.26 ATOM 158 CD GLU 19 9.032 4.870 9.556 1.00 0.26 ATOM 159 OE1 GLU 19 9.603 5.580 10.411 1.00 0.26 ATOM 160 OE2 GLU 19 9.584 3.874 9.039 1.00 0.26 ATOM 161 N VAL 20 3.357 5.267 9.383 1.00 0.13 ATOM 162 CA VAL 20 2.413 4.289 9.883 1.00 0.13 ATOM 163 C VAL 20 3.055 3.031 10.452 1.00 0.13 ATOM 164 O VAL 20 2.417 2.187 11.078 1.00 0.13 ATOM 165 CB VAL 20 1.413 3.807 8.836 1.00 0.13 ATOM 166 CG1 VAL 20 0.247 2.900 9.218 1.00 0.13 ATOM 167 CG2 VAL 20 0.858 4.869 7.890 1.00 0.13 ATOM 168 N ARG 21 4.339 2.754 10.210 1.00 0.19 ATOM 169 CA ARG 21 5.098 1.602 10.654 1.00 0.19 ATOM 170 C ARG 21 5.838 1.847 11.960 1.00 0.19 ATOM 171 O ARG 21 5.596 1.079 12.889 1.00 0.19 ATOM 172 CB ARG 21 5.987 0.963 9.592 1.00 0.19 ATOM 173 CG ARG 21 7.113 1.864 9.092 1.00 0.19 ATOM 174 CD ARG 21 8.196 1.079 8.358 1.00 0.19 ATOM 175 NE ARG 21 7.642 0.374 7.202 1.00 0.19 ATOM 176 CZ ARG 21 8.459 -0.385 6.459 1.00 0.19 ATOM 177 NH1 ARG 21 9.707 -0.696 6.833 1.00 0.19 ATOM 178 NH2 ARG 21 8.041 -0.796 5.254 1.00 0.19 ATOM 179 N CYS 22 6.667 2.893 12.001 1.00 0.16 ATOM 180 CA CYS 22 7.169 3.361 13.277 1.00 0.16 ATOM 181 C CYS 22 6.039 4.055 14.023 1.00 0.16 ATOM 182 O CYS 22 6.223 4.180 15.231 1.00 0.16 ATOM 183 CB CYS 22 8.352 4.296 13.044 1.00 0.16 ATOM 184 SG CYS 22 9.752 3.298 12.479 1.00 0.16 ATOM 185 N ASP 23 4.908 4.411 13.410 1.00 0.24 ATOM 186 CA ASP 23 3.658 4.878 13.975 1.00 0.24 ATOM 187 C ASP 23 2.791 3.710 14.420 1.00 0.24 ATOM 188 O ASP 23 2.444 3.702 15.599 1.00 0.24 ATOM 189 CB ASP 23 2.830 5.695 12.987 1.00 0.24 ATOM 190 CG ASP 23 3.139 7.170 12.775 1.00 0.24 ATOM 191 OD1 ASP 23 3.945 7.738 13.544 1.00 0.24 ATOM 192 OD2 ASP 23 2.481 7.748 11.884 1.00 0.24 ATOM 193 N GLU 24 2.414 2.661 13.685 1.00 0.22 ATOM 194 CA GLU 24 1.672 1.576 14.293 1.00 0.22 ATOM 195 C GLU 24 2.570 0.886 15.309 1.00 0.22 ATOM 196 O GLU 24 2.009 0.400 16.289 1.00 0.22 ATOM 197 CB GLU 24 1.086 0.499 13.383 1.00 0.22 ATOM 198 CG GLU 24 -0.180 0.769 12.577 1.00 0.22 ATOM 199 CD GLU 24 -1.423 1.153 13.369 1.00 0.22 ATOM 200 OE1 GLU 24 -1.487 2.282 13.903 1.00 0.22 ATOM 201 OE2 GLU 24 -2.377 0.346 13.370 1.00 0.22 ATOM 202 N SER 25 3.902 0.852 15.233 1.00 0.20 ATOM 203 CA SER 25 4.656 0.514 16.424 1.00 0.20 ATOM 204 C SER 25 4.723 1.664 17.418 1.00 0.20 ATOM 205 O SER 25 4.469 1.384 18.587 1.00 0.20 ATOM 206 CB SER 25 6.030 -0.102 16.177 1.00 0.20 ATOM 207 OG SER 25 6.862 0.774 15.450 1.00 0.20 ATOM 208 N ASN 26 4.961 2.947 17.136 1.00 0.23 ATOM 209 CA ASN 26 5.094 3.948 18.175 1.00 0.23 ATOM 210 C ASN 26 3.775 4.409 18.779 1.00 0.23 ATOM 211 O ASN 26 3.823 4.827 19.933 1.00 0.23 ATOM 212 CB ASN 26 6.005 5.131 17.859 1.00 0.23 ATOM 213 CG ASN 26 5.549 6.207 16.884 1.00 0.23 ATOM 214 OD1 ASN 26 6.359 6.830 16.202 1.00 0.23 ATOM 215 ND2 ASN 26 4.276 6.606 16.843 1.00 0.23 ATOM 216 N HIS 27 2.668 4.370 18.034 1.00 0.20 ATOM 217 CA HIS 27 1.253 4.429 18.344 1.00 0.20 ATOM 218 C HIS 27 0.924 3.104 19.015 1.00 0.20 ATOM 219 O HIS 27 0.771 3.151 20.233 1.00 0.20 ATOM 220 CB HIS 27 0.274 4.725 17.210 1.00 0.20 ATOM 221 CG HIS 27 0.507 5.935 16.345 1.00 0.20 ATOM 222 ND1 HIS 27 -0.002 6.103 15.059 1.00 0.20 ATOM 223 CD2 HIS 27 1.220 7.058 16.675 1.00 0.20 ATOM 224 CE1 HIS 27 0.438 7.287 14.627 1.00 0.20 ATOM 225 NE2 HIS 27 1.195 7.880 15.566 1.00 0.20 ATOM 226 N CYS 28 0.895 1.910 18.418 1.00 0.16 ATOM 227 CA CYS 28 0.544 0.719 19.165 1.00 0.16 ATOM 228 C CYS 28 1.401 0.502 20.404 1.00 0.16 ATOM 229 O CYS 28 0.883 0.330 21.506 1.00 0.16 ATOM 230 CB CYS 28 0.392 -0.558 18.343 1.00 0.16 ATOM 231 SG CYS 28 -0.885 -0.410 17.069 1.00 0.16 ATOM 232 N VAL 29 2.731 0.616 20.387 1.00 0.16 ATOM 233 CA VAL 29 3.578 0.617 21.563 1.00 0.16 ATOM 234 C VAL 29 3.322 1.826 22.453 1.00 0.16 ATOM 235 O VAL 29 3.302 1.647 23.669 1.00 0.16 ATOM 236 CB VAL 29 5.052 0.413 21.223 1.00 0.16 ATOM 237 CG1 VAL 29 6.018 0.295 22.399 1.00 0.16 ATOM 238 CG2 VAL 29 5.247 -0.837 20.369 1.00 0.16 ATOM 239 N GLU 30 3.037 3.054 22.017 1.00 0.29 ATOM 240 CA GLU 30 2.620 4.088 22.945 1.00 0.29 ATOM 241 C GLU 30 1.214 3.888 23.491 1.00 0.29 ATOM 242 O GLU 30 1.068 4.166 24.679 1.00 0.29 ATOM 243 CB GLU 30 2.840 5.551 22.566 1.00 0.29 ATOM 244 CG GLU 30 1.866 6.102 21.530 1.00 0.29 ATOM 245 CD GLU 30 0.512 6.602 22.011 1.00 0.29 ATOM 246 OE1 GLU 30 0.325 6.772 23.236 1.00 0.29 ATOM 247 OE2 GLU 30 -0.386 6.781 21.160 1.00 0.29 ATOM 248 N VAL 31 0.175 3.376 22.826 1.00 0.18 ATOM 249 CA VAL 31 -1.171 3.188 23.330 1.00 0.18 ATOM 250 C VAL 31 -1.383 1.834 23.993 1.00 0.18 ATOM 251 O VAL 31 -2.085 1.758 24.999 1.00 0.18 ATOM 252 CB VAL 31 -2.286 3.599 22.372 1.00 0.18 ATOM 253 CG1 VAL 31 -1.996 3.652 20.875 1.00 0.18 ATOM 254 CG2 VAL 31 -3.493 2.670 22.457 1.00 0.18 ATOM 255 N ARG 32 -0.798 0.742 23.493 1.00 0.32 ATOM 256 CA ARG 32 -0.829 -0.623 23.979 1.00 0.32 ATOM 257 C ARG 32 0.314 -0.936 24.934 1.00 0.32 ATOM 258 O ARG 32 0.302 -1.953 25.625 1.00 0.32 ATOM 259 CB ARG 32 -0.812 -1.765 22.966 1.00 0.32 ATOM 260 CG ARG 32 -1.976 -1.838 21.982 1.00 0.32 ATOM 261 CD ARG 32 -1.728 -0.780 20.911 1.00 0.32 ATOM 262 NE ARG 32 -2.586 -0.836 19.727 1.00 0.32 ATOM 263 CZ ARG 32 -3.645 -0.019 19.664 1.00 0.32 ATOM 264 NH1 ARG 32 -4.471 0.143 20.706 1.00 0.32 ATOM 265 NH2 ARG 32 -3.862 0.722 18.569 1.00 0.32 ATOM 266 N CYS 33 1.374 -0.124 24.908 1.00 0.20 ATOM 267 CA CYS 33 2.174 0.023 26.107 1.00 0.20 ATOM 268 C CYS 33 1.655 1.175 26.957 1.00 0.20 ATOM 269 O CYS 33 1.896 1.010 28.151 1.00 0.20 ATOM 270 CB CYS 33 3.685 -0.077 25.926 1.00 0.20 ATOM 271 SG CYS 33 4.144 -1.422 24.804 1.00 0.20 ATOM 272 N SER 34 0.956 2.254 26.598 1.00 0.33 ATOM 273 CA SER 34 0.401 3.176 27.569 1.00 0.33 ATOM 274 C SER 34 -0.769 2.607 28.361 1.00 0.33 ATOM 275 O SER 34 -0.749 2.699 29.586 1.00 0.33 ATOM 276 CB SER 34 0.013 4.594 27.158 1.00 0.33 ATOM 277 OG SER 34 1.183 5.372 27.036 1.00 0.33 ATOM 278 N ASP 35 -1.768 1.976 27.740 1.00 0.37 ATOM 279 CA ASP 35 -2.850 1.352 28.474 1.00 0.37 ATOM 280 C ASP 35 -2.304 0.290 29.419 1.00 0.37 ATOM 281 O ASP 35 -2.546 0.346 30.622 1.00 0.37 ATOM 282 CB ASP 35 -3.978 0.861 27.570 1.00 0.37 ATOM 283 CG ASP 35 -3.777 -0.425 26.781 1.00 0.37 ATOM 284 OD1 ASP 35 -2.615 -0.823 26.554 1.00 0.37 ATOM 285 OD2 ASP 35 -4.772 -1.065 26.377 1.00 0.37 ATOM 286 N THR 36 -1.427 -0.587 28.924 1.00 0.34 ATOM 287 CA THR 36 -0.774 -1.591 29.740 1.00 0.34 ATOM 288 C THR 36 0.177 -0.946 30.739 1.00 0.34 ATOM 289 O THR 36 0.092 -1.332 31.903 1.00 0.34 ATOM 290 CB THR 36 -0.145 -2.755 28.979 1.00 0.34 ATOM 291 OG1 THR 36 0.952 -2.345 28.193 1.00 0.34 ATOM 292 CG2 THR 36 -1.108 -3.486 28.046 1.00 0.34 ATOM 293 N LYS 37 1.011 0.050 30.433 1.00 0.44 ATOM 294 CA LYS 37 1.984 0.682 31.302 1.00 0.44 ATOM 295 C LYS 37 1.339 1.538 32.385 1.00 0.44 ATOM 296 O LYS 37 1.791 1.526 33.528 1.00 0.44 ATOM 297 CB LYS 37 3.266 1.178 30.639 1.00 0.44 ATOM 298 CG LYS 37 3.195 2.613 30.126 1.00 0.44 ATOM 299 CD LYS 37 4.096 3.221 29.054 1.00 0.44 ATOM 300 CE LYS 37 4.645 2.396 27.893 1.00 0.44 ATOM 301 NZ LYS 37 5.445 3.214 26.970 1.00 0.44 ATOM 302 N TYR 38 0.200 2.190 32.138 1.00 0.32 ATOM 303 CA TYR 38 -0.574 3.030 33.032 1.00 0.32 ATOM 304 C TYR 38 -1.571 2.212 33.843 1.00 0.32 ATOM 305 O TYR 38 -2.235 2.747 34.729 1.00 0.32 ATOM 306 CB TYR 38 -1.187 4.217 32.291 1.00 0.32 ATOM 307 CG TYR 38 -0.410 5.224 31.478 1.00 0.32 ATOM 308 CD1 TYR 38 -0.921 6.495 31.190 1.00 0.32 ATOM 309 CD2 TYR 38 0.827 4.921 30.893 1.00 0.32 ATOM 310 CE1 TYR 38 -0.281 7.388 30.322 1.00 0.32 ATOM 311 CE2 TYR 38 1.473 5.750 29.967 1.00 0.32 ATOM 312 CZ TYR 38 0.898 6.997 29.654 1.00 0.32 ATOM 313 OH TYR 38 1.464 7.785 28.695 1.00 0.32 ATOM 314 N THR 39 -1.727 0.914 33.575 1.00 0.45 ATOM 315 CA THR 39 -2.465 -0.116 34.282 1.00 0.45 ATOM 316 C THR 39 -1.613 -1.197 34.934 1.00 0.45 ATOM 317 O THR 39 -2.091 -1.920 35.805 1.00 0.45 ATOM 318 CB THR 39 -3.581 -0.669 33.399 1.00 0.45 ATOM 319 OG1 THR 39 -4.687 -1.200 34.095 1.00 0.45 ATOM 320 CG2 THR 39 -3.149 -1.850 32.533 1.00 0.45 ATOM 321 N LEU 40 -0.336 -1.376 34.579 1.00 0.26 ATOM 322 CA LEU 40 0.686 -2.231 35.152 1.00 0.26 ATOM 323 C LEU 40 1.618 -1.517 36.122 1.00 0.26 ATOM 324 O LEU 40 2.162 -2.157 37.018 1.00 0.26 ATOM 325 CB LEU 40 1.491 -3.029 34.131 1.00 0.26 ATOM 326 CG LEU 40 2.459 -2.237 33.255 1.00 0.26 ATOM 327 CD1 LEU 40 3.884 -2.053 33.768 1.00 0.26 ATOM 328 CD2 LEU 40 2.648 -2.771 31.838 1.00 0.26 ATOM 329 N CYS 41 1.880 -0.220 35.937 1.00 0.39 ATOM 330 CA CYS 41 2.670 0.619 36.818 1.00 0.39 ATOM 331 C CYS 41 2.126 2.023 37.042 1.00 0.39 ATOM 332 CB CYS 41 4.163 0.527 36.516 1.00 0.39 ATOM 333 SG CYS 41 4.698 1.194 34.920 1.00 0.39 TER END