####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 333), selected 41 , name T0955TS476_2 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS476_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 12 - 37 4.99 13.11 LCS_AVERAGE: 57.11 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 1.52 16.15 LCS_AVERAGE: 22.96 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 6 - 16 0.84 15.74 LCS_AVERAGE: 16.24 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 13 21 3 3 4 4 8 8 11 14 15 20 23 25 25 26 27 28 30 30 31 31 LCS_GDT Q 2 Q 2 8 15 21 3 6 7 11 11 15 15 15 16 19 23 25 25 26 27 27 30 30 31 31 LCS_GDT E 3 E 3 10 15 21 5 9 11 14 14 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT T 4 T 4 10 15 21 5 9 11 14 14 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT R 5 R 5 10 15 21 5 9 11 14 14 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT K 6 K 6 11 15 21 5 9 11 14 14 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT K 7 K 7 11 15 21 6 9 11 14 14 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT C 8 C 8 11 15 21 6 9 11 14 14 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT T 9 T 9 11 15 21 5 9 11 14 14 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT E 10 E 10 11 15 21 6 9 11 14 14 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT M 11 M 11 11 15 21 5 9 11 14 14 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT K 12 K 12 11 15 26 5 9 11 14 14 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT K 13 K 13 11 15 26 5 9 11 14 14 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT K 14 K 14 11 15 26 6 9 11 14 14 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT F 15 F 15 11 15 26 6 9 11 14 14 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT K 16 K 16 11 15 26 6 8 11 14 14 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT N 17 N 17 4 13 26 4 4 4 5 8 10 11 15 17 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT C 18 C 18 5 7 26 4 4 5 5 8 10 11 15 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT E 19 E 19 5 7 26 4 4 5 5 8 10 11 15 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT V 20 V 20 5 7 26 4 4 5 5 5 7 10 11 13 18 21 23 25 25 27 28 30 30 31 31 LCS_GDT R 21 R 21 5 7 26 4 4 5 5 6 7 10 11 13 16 20 23 25 25 26 28 30 30 31 31 LCS_GDT C 22 C 22 5 5 26 3 4 5 5 5 7 10 11 13 18 21 23 25 25 26 27 28 29 29 30 LCS_GDT D 23 D 23 4 6 26 3 3 5 6 7 9 11 13 14 18 21 23 25 25 26 27 28 29 29 30 LCS_GDT E 24 E 24 4 6 26 3 3 4 4 5 6 11 13 14 18 21 23 25 25 26 27 28 29 29 30 LCS_GDT S 25 S 25 4 7 26 3 3 5 6 8 9 11 13 14 18 21 23 25 25 26 27 28 29 29 30 LCS_GDT N 26 N 26 6 7 26 3 5 6 6 8 9 11 13 14 18 21 23 25 25 26 27 28 29 29 30 LCS_GDT H 27 H 27 6 7 26 3 5 6 6 8 9 11 13 14 18 21 23 25 25 26 27 28 29 29 30 LCS_GDT C 28 C 28 6 7 26 3 5 6 6 8 9 11 13 14 18 21 23 25 25 26 27 28 29 29 30 LCS_GDT V 29 V 29 6 7 26 3 5 6 6 8 9 11 13 14 18 21 23 25 25 26 27 28 29 31 31 LCS_GDT E 30 E 30 6 7 26 3 5 6 6 8 9 11 13 14 18 21 23 25 25 26 28 30 30 31 31 LCS_GDT V 31 V 31 6 7 26 2 3 6 6 8 10 11 15 17 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT R 32 R 32 3 4 26 3 4 5 8 9 11 12 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT C 33 C 33 4 5 26 3 4 4 4 8 9 12 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT S 34 S 34 4 5 26 3 4 4 5 6 8 12 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT D 35 D 35 4 5 26 3 4 4 11 13 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT T 36 T 36 4 5 26 3 4 4 4 5 6 12 13 17 22 23 25 25 26 27 28 30 30 31 31 LCS_GDT K 37 K 37 3 5 26 3 4 4 4 6 8 11 13 14 18 21 23 25 26 27 28 30 30 31 31 LCS_GDT Y 38 Y 38 3 3 20 3 3 3 4 4 5 8 8 12 14 16 19 21 22 24 28 30 30 31 31 LCS_GDT T 39 T 39 3 3 11 3 3 3 4 4 5 8 8 12 13 15 15 15 19 19 22 24 25 27 29 LCS_GDT L 40 L 40 3 3 11 3 3 3 3 3 4 4 5 8 8 8 10 10 10 13 15 18 20 21 23 LCS_GDT C 41 C 41 3 3 11 3 3 3 3 3 3 4 4 7 8 8 10 10 10 13 16 18 20 21 23 LCS_AVERAGE LCS_A: 32.10 ( 16.24 22.96 57.11 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 9 11 14 14 15 15 16 19 22 23 25 25 26 27 28 30 30 31 31 GDT PERCENT_AT 14.63 21.95 26.83 34.15 34.15 36.59 36.59 39.02 46.34 53.66 56.10 60.98 60.98 63.41 65.85 68.29 73.17 73.17 75.61 75.61 GDT RMS_LOCAL 0.33 0.63 0.84 1.23 1.23 1.52 1.52 2.23 3.03 3.49 3.61 3.91 3.91 4.21 4.56 5.19 5.44 5.44 5.76 5.76 GDT RMS_ALL_AT 15.45 15.76 15.74 15.99 15.99 16.15 16.15 15.19 14.28 13.73 13.59 13.56 13.56 13.40 13.09 12.36 12.41 12.41 12.14 12.14 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 19 E 19 # possible swapping detected: D 35 D 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 7.442 0 0.137 0.653 8.904 0.000 0.000 6.908 LGA Q 2 Q 2 5.979 0 0.045 1.042 8.797 2.727 1.212 8.797 LGA E 3 E 3 1.456 0 0.049 0.742 6.280 55.909 29.697 6.280 LGA T 4 T 4 2.863 0 0.021 0.177 4.827 35.909 21.818 4.827 LGA R 5 R 5 3.119 0 0.094 1.352 11.966 25.000 9.587 11.966 LGA K 6 K 6 2.552 0 0.071 0.954 5.548 35.909 26.869 5.548 LGA K 7 K 7 1.358 0 0.056 0.654 6.368 65.909 36.364 6.368 LGA C 8 C 8 0.522 0 0.127 0.726 3.195 86.364 74.242 3.195 LGA T 9 T 9 1.105 0 0.060 0.126 1.812 70.455 66.234 1.489 LGA E 10 E 10 2.118 0 0.055 0.871 5.460 41.364 24.242 4.951 LGA M 11 M 11 2.021 0 0.138 1.383 8.251 47.727 30.909 8.251 LGA K 12 K 12 1.848 0 0.056 0.750 4.271 47.727 40.000 4.271 LGA K 13 K 13 1.821 0 0.057 0.748 4.242 47.727 36.566 4.242 LGA K 14 K 14 1.894 0 0.169 0.649 5.365 47.727 25.657 5.365 LGA F 15 F 15 2.066 0 0.355 0.343 5.629 44.545 20.992 5.598 LGA K 16 K 16 1.530 0 0.059 1.015 8.979 32.727 18.182 8.979 LGA N 17 N 17 6.605 0 0.041 0.440 9.926 0.455 0.227 9.926 LGA C 18 C 18 6.839 0 0.656 1.031 6.839 0.000 0.000 6.075 LGA E 19 E 19 8.172 0 0.172 1.045 12.234 0.000 0.000 10.785 LGA V 20 V 20 13.305 0 0.177 1.124 15.639 0.000 0.000 15.639 LGA R 21 R 21 16.007 0 0.604 1.320 23.594 0.000 0.000 23.594 LGA C 22 C 22 22.292 0 0.425 0.766 25.134 0.000 0.000 19.951 LGA D 23 D 23 27.672 0 0.363 1.323 30.278 0.000 0.000 27.863 LGA E 24 E 24 34.789 0 0.345 0.913 38.896 0.000 0.000 38.896 LGA S 25 S 25 35.989 0 0.161 0.705 37.265 0.000 0.000 37.265 LGA N 26 N 26 33.461 0 0.622 0.958 34.226 0.000 0.000 29.143 LGA H 27 H 27 28.892 0 0.383 1.180 34.245 0.000 0.000 34.245 LGA C 28 C 28 23.888 0 0.106 0.651 25.743 0.000 0.000 25.743 LGA V 29 V 29 16.548 0 0.077 1.113 19.242 0.000 0.000 13.919 LGA E 30 E 30 14.181 0 0.621 1.173 14.922 0.000 0.000 13.851 LGA V 31 V 31 7.448 0 0.507 0.916 9.628 0.000 1.558 3.718 LGA R 32 R 32 6.259 0 0.590 1.218 13.221 0.000 0.000 13.221 LGA C 33 C 33 6.153 0 0.168 0.242 8.248 0.000 0.000 8.248 LGA S 34 S 34 4.635 0 0.260 0.755 5.661 4.545 3.030 5.661 LGA D 35 D 35 1.737 0 0.159 1.145 6.682 36.818 19.091 5.768 LGA T 36 T 36 7.287 0 0.611 0.926 10.884 0.455 0.260 8.927 LGA K 37 K 37 10.608 0 0.448 1.454 16.993 0.000 0.000 16.581 LGA Y 38 Y 38 11.915 0 0.652 1.282 14.519 0.000 0.000 8.404 LGA T 39 T 39 16.111 0 0.611 0.902 19.488 0.000 0.000 15.034 LGA L 40 L 40 23.063 0 0.620 1.288 26.426 0.000 0.000 22.925 LGA C 41 C 41 26.492 2 0.064 0.703 27.784 0.000 0.000 26.623 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 163 99.39 335 333 99.40 41 41 SUMMARY(RMSD_GDC): 9.866 9.741 10.281 17.805 11.872 2.661 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 16 2.23 40.854 37.566 0.685 LGA_LOCAL RMSD: 2.235 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.192 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 9.866 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.683620 * X + 0.660420 * Y + -0.310658 * Z + -29.345413 Y_new = 0.635888 * X + -0.747878 * Y + -0.190590 * Z + 16.174767 Z_new = -0.358203 * X + -0.067253 * Y + -0.931218 * Z + 43.277336 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.749240 0.366343 -3.069498 [DEG: 42.9283 20.9899 -175.8693 ] ZXZ: -1.020507 2.768538 -1.756386 [DEG: -58.4707 158.6255 -100.6335 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS476_2 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS476_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 16 2.23 37.566 9.87 REMARK ---------------------------------------------------------- MOLECULE T0955TS476_2 PFRMAT TS TARGET T0955 MODEL 2 PARENT N/A ATOM 1 N SER 1 -0.839 -11.410 6.392 1.00 0.63 ATOM 2 CA SER 1 0.401 -12.181 6.215 1.00 0.63 ATOM 3 C SER 1 1.500 -11.308 5.626 1.00 0.63 ATOM 4 O SER 1 1.134 -10.260 5.100 1.00 0.63 ATOM 5 CB SER 1 0.149 -13.344 5.260 1.00 0.63 ATOM 6 OG SER 1 -0.244 -12.799 4.021 1.00 0.63 ATOM 7 N GLN 2 2.794 -11.631 5.687 1.00 0.49 ATOM 8 CA GLN 2 3.821 -10.715 5.233 1.00 0.49 ATOM 9 C GLN 2 3.855 -10.506 3.725 1.00 0.49 ATOM 10 O GLN 2 4.705 -9.765 3.239 1.00 0.49 ATOM 11 CB GLN 2 5.217 -10.977 5.792 1.00 0.49 ATOM 12 CG GLN 2 6.093 -9.899 6.422 1.00 0.49 ATOM 13 CD GLN 2 5.602 -8.493 6.740 1.00 0.49 ATOM 14 OE1 GLN 2 4.661 -7.914 6.202 1.00 0.49 ATOM 15 NE2 GLN 2 6.249 -7.796 7.676 1.00 0.49 ATOM 16 N GLU 3 2.966 -11.084 2.914 1.00 0.60 ATOM 17 CA GLU 3 2.866 -10.850 1.487 1.00 0.60 ATOM 18 C GLU 3 1.788 -9.851 1.087 1.00 0.60 ATOM 19 O GLU 3 2.001 -9.045 0.184 1.00 0.60 ATOM 20 CB GLU 3 2.729 -12.176 0.744 1.00 0.60 ATOM 21 CG GLU 3 1.547 -13.033 1.189 1.00 0.60 ATOM 22 CD GLU 3 1.824 -13.976 2.352 1.00 0.60 ATOM 23 OE1 GLU 3 2.835 -13.792 3.062 1.00 0.60 ATOM 24 OE2 GLU 3 0.911 -14.763 2.682 1.00 0.60 ATOM 25 N THR 4 0.636 -9.825 1.760 1.00 0.41 ATOM 26 CA THR 4 -0.361 -8.772 1.736 1.00 0.41 ATOM 27 C THR 4 0.077 -7.628 2.638 1.00 0.41 ATOM 28 O THR 4 -0.024 -6.458 2.272 1.00 0.41 ATOM 29 CB THR 4 -1.773 -9.262 2.045 1.00 0.41 ATOM 30 OG1 THR 4 -2.667 -8.278 2.516 1.00 0.41 ATOM 31 CG2 THR 4 -1.788 -10.353 3.111 1.00 0.41 ATOM 32 N ARG 5 0.709 -7.934 3.773 1.00 0.37 ATOM 33 CA ARG 5 1.372 -6.981 4.642 1.00 0.37 ATOM 34 C ARG 5 2.679 -6.492 4.034 1.00 0.37 ATOM 35 O ARG 5 2.803 -5.269 4.027 1.00 0.37 ATOM 36 CB ARG 5 1.439 -7.436 6.097 1.00 0.37 ATOM 37 CG ARG 5 0.122 -7.832 6.758 1.00 0.37 ATOM 38 CD ARG 5 0.238 -8.389 8.173 1.00 0.37 ATOM 39 NE ARG 5 1.225 -9.461 8.305 1.00 0.37 ATOM 40 CZ ARG 5 2.500 -9.282 8.674 1.00 0.37 ATOM 41 NH1 ARG 5 2.967 -8.100 9.097 1.00 0.37 ATOM 42 NH2 ARG 5 3.419 -10.257 8.690 1.00 0.37 ATOM 43 N LYS 6 3.612 -7.177 3.366 1.00 0.41 ATOM 44 CA LYS 6 4.725 -6.511 2.717 1.00 0.41 ATOM 45 C LYS 6 4.267 -5.464 1.712 1.00 0.41 ATOM 46 O LYS 6 4.943 -4.444 1.589 1.00 0.41 ATOM 47 CB LYS 6 5.785 -7.367 2.030 1.00 0.41 ATOM 48 CG LYS 6 5.244 -8.003 0.753 1.00 0.41 ATOM 49 CD LYS 6 6.078 -9.089 0.079 1.00 0.41 ATOM 50 CE LYS 6 5.338 -9.745 -1.084 1.00 0.41 ATOM 51 NZ LYS 6 5.084 -8.838 -2.214 1.00 0.41 ATOM 52 N LYS 7 3.154 -5.657 1.000 1.00 0.43 ATOM 53 CA LYS 7 2.646 -4.746 -0.006 1.00 0.43 ATOM 54 C LYS 7 1.771 -3.630 0.546 1.00 0.43 ATOM 55 O LYS 7 1.932 -2.481 0.139 1.00 0.43 ATOM 56 CB LYS 7 1.959 -5.466 -1.163 1.00 0.43 ATOM 57 CG LYS 7 0.638 -6.113 -0.754 1.00 0.43 ATOM 58 CD LYS 7 -0.154 -6.638 -1.948 1.00 0.43 ATOM 59 CE LYS 7 0.430 -7.880 -2.613 1.00 0.43 ATOM 60 NZ LYS 7 0.132 -9.118 -1.876 1.00 0.43 ATOM 61 N CYS 8 0.880 -3.913 1.500 1.00 0.22 ATOM 62 CA CYS 8 0.191 -2.856 2.211 1.00 0.22 ATOM 63 C CYS 8 1.189 -2.256 3.191 1.00 0.22 ATOM 64 O CYS 8 1.559 -1.113 2.938 1.00 0.22 ATOM 65 CB CYS 8 -1.184 -3.163 2.798 1.00 0.22 ATOM 66 SG CYS 8 -1.128 -4.319 4.190 1.00 0.22 ATOM 67 N THR 9 1.740 -2.946 4.192 1.00 0.25 ATOM 68 CA THR 9 2.811 -2.446 5.032 1.00 0.25 ATOM 69 C THR 9 3.897 -1.733 4.242 1.00 0.25 ATOM 70 O THR 9 4.240 -0.662 4.740 1.00 0.25 ATOM 71 CB THR 9 3.387 -3.418 6.058 1.00 0.25 ATOM 72 OG1 THR 9 2.390 -4.180 6.702 1.00 0.25 ATOM 73 CG2 THR 9 4.047 -2.696 7.230 1.00 0.25 ATOM 74 N GLU 10 4.405 -2.066 3.052 1.00 0.30 ATOM 75 CA GLU 10 5.226 -1.112 2.335 1.00 0.30 ATOM 76 C GLU 10 4.505 0.165 1.927 1.00 0.30 ATOM 77 O GLU 10 5.017 1.237 2.241 1.00 0.30 ATOM 78 CB GLU 10 6.113 -1.722 1.253 1.00 0.30 ATOM 79 CG GLU 10 5.397 -2.082 -0.046 1.00 0.30 ATOM 80 CD GLU 10 5.496 -0.962 -1.072 1.00 0.30 ATOM 81 OE1 GLU 10 6.628 -0.588 -1.450 1.00 0.30 ATOM 82 OE2 GLU 10 4.503 -0.272 -1.386 1.00 0.30 ATOM 83 N MET 11 3.340 0.172 1.273 1.00 0.17 ATOM 84 CA MET 11 2.587 1.358 0.914 1.00 0.17 ATOM 85 C MET 11 1.971 2.108 2.088 1.00 0.17 ATOM 86 O MET 11 2.228 3.294 2.283 1.00 0.17 ATOM 87 CB MET 11 1.625 1.168 -0.255 1.00 0.17 ATOM 88 CG MET 11 0.384 0.343 0.071 1.00 0.17 ATOM 89 SD MET 11 -0.476 -0.257 -1.405 1.00 0.17 ATOM 90 CE MET 11 -1.451 -1.611 -0.702 1.00 0.17 ATOM 91 N LYS 12 1.246 1.464 3.006 1.00 0.32 ATOM 92 CA LYS 12 0.869 2.009 4.296 1.00 0.32 ATOM 93 C LYS 12 2.103 2.412 5.091 1.00 0.32 ATOM 94 O LYS 12 1.963 3.435 5.760 1.00 0.32 ATOM 95 CB LYS 12 -0.194 1.218 5.053 1.00 0.32 ATOM 96 CG LYS 12 0.299 -0.033 5.776 1.00 0.32 ATOM 97 CD LYS 12 -0.706 -1.009 6.381 1.00 0.32 ATOM 98 CE LYS 12 0.051 -2.194 6.975 1.00 0.32 ATOM 99 NZ LYS 12 -0.790 -3.318 7.415 1.00 0.32 ATOM 100 N LYS 13 3.291 1.803 5.115 1.00 0.30 ATOM 101 CA LYS 13 4.441 2.270 5.864 1.00 0.30 ATOM 102 C LYS 13 5.031 3.557 5.304 1.00 0.30 ATOM 103 O LYS 13 5.146 4.529 6.048 1.00 0.30 ATOM 104 CB LYS 13 5.552 1.316 6.292 1.00 0.30 ATOM 105 CG LYS 13 6.673 1.011 5.303 1.00 0.30 ATOM 106 CD LYS 13 7.598 -0.145 5.672 1.00 0.30 ATOM 107 CE LYS 13 6.831 -1.382 6.132 1.00 0.30 ATOM 108 NZ LYS 13 7.615 -2.627 6.123 1.00 0.30 ATOM 109 N LYS 14 5.308 3.616 3.999 1.00 0.24 ATOM 110 CA LYS 14 5.736 4.828 3.331 1.00 0.24 ATOM 111 C LYS 14 4.710 5.923 3.592 1.00 0.24 ATOM 112 O LYS 14 5.032 6.915 4.241 1.00 0.24 ATOM 113 CB LYS 14 6.117 4.603 1.870 1.00 0.24 ATOM 114 CG LYS 14 4.942 4.266 0.955 1.00 0.24 ATOM 115 CD LYS 14 5.135 3.828 -0.494 1.00 0.24 ATOM 116 CE LYS 14 6.403 3.023 -0.761 1.00 0.24 ATOM 117 NZ LYS 14 6.258 1.675 -0.189 1.00 0.24 ATOM 118 N PHE 15 3.428 5.678 3.313 1.00 0.09 ATOM 119 CA PHE 15 2.331 6.608 3.497 1.00 0.09 ATOM 120 C PHE 15 1.972 6.852 4.956 1.00 0.09 ATOM 121 O PHE 15 1.257 7.836 5.136 1.00 0.09 ATOM 122 CB PHE 15 1.113 6.205 2.670 1.00 0.09 ATOM 123 CG PHE 15 1.263 5.874 1.205 1.00 0.09 ATOM 124 CD1 PHE 15 0.404 4.969 0.570 1.00 0.09 ATOM 125 CD2 PHE 15 2.295 6.436 0.444 1.00 0.09 ATOM 126 CE1 PHE 15 0.539 4.648 -0.787 1.00 0.09 ATOM 127 CE2 PHE 15 2.515 6.045 -0.882 1.00 0.09 ATOM 128 CZ PHE 15 1.611 5.182 -1.513 1.00 0.09 ATOM 129 N LYS 16 2.348 6.080 5.980 1.00 0.30 ATOM 130 CA LYS 16 2.025 6.235 7.384 1.00 0.30 ATOM 131 C LYS 16 3.112 6.874 8.239 1.00 0.30 ATOM 132 O LYS 16 2.860 7.565 9.223 1.00 0.30 ATOM 133 CB LYS 16 1.541 5.009 8.154 1.00 0.30 ATOM 134 CG LYS 16 2.671 4.090 8.609 1.00 0.30 ATOM 135 CD LYS 16 2.293 2.731 9.190 1.00 0.30 ATOM 136 CE LYS 16 1.148 2.118 8.390 1.00 0.30 ATOM 137 NZ LYS 16 0.577 0.946 9.073 1.00 0.30 ATOM 138 N ASN 17 4.360 6.528 7.916 1.00 0.32 ATOM 139 CA ASN 17 5.537 7.073 8.564 1.00 0.32 ATOM 140 C ASN 17 5.803 8.464 8.009 1.00 0.32 ATOM 141 O ASN 17 6.301 9.335 8.718 1.00 0.32 ATOM 142 CB ASN 17 6.719 6.133 8.342 1.00 0.32 ATOM 143 CG ASN 17 6.481 4.772 8.980 1.00 0.32 ATOM 144 OD1 ASN 17 5.865 4.629 10.034 1.00 0.32 ATOM 145 ND2 ASN 17 7.012 3.684 8.417 1.00 0.32 ATOM 146 N CYS 18 5.411 8.649 6.745 1.00 0.15 ATOM 147 CA CYS 18 5.351 9.894 6.005 1.00 0.15 ATOM 148 C CYS 18 3.928 10.415 5.866 1.00 0.15 ATOM 149 O CYS 18 3.733 11.388 5.140 1.00 0.15 ATOM 150 CB CYS 18 6.145 9.650 4.725 1.00 0.15 ATOM 151 SG CYS 18 6.879 11.128 3.983 1.00 0.15 ATOM 152 N GLU 19 2.868 9.933 6.520 1.00 0.23 ATOM 153 CA GLU 19 1.702 10.757 6.773 1.00 0.23 ATOM 154 C GLU 19 1.784 11.316 8.186 1.00 0.23 ATOM 155 O GLU 19 1.852 10.605 9.185 1.00 0.23 ATOM 156 CB GLU 19 0.286 10.211 6.612 1.00 0.23 ATOM 157 CG GLU 19 0.004 8.959 7.438 1.00 0.23 ATOM 158 CD GLU 19 -0.932 9.027 8.636 1.00 0.23 ATOM 159 OE1 GLU 19 -1.776 9.948 8.680 1.00 0.23 ATOM 160 OE2 GLU 19 -0.939 8.069 9.440 1.00 0.23 ATOM 161 N VAL 20 1.722 12.649 8.231 1.00 0.16 ATOM 162 CA VAL 20 1.834 13.339 9.501 1.00 0.16 ATOM 163 C VAL 20 0.441 13.816 9.887 1.00 0.16 ATOM 164 O VAL 20 0.068 14.981 9.773 1.00 0.16 ATOM 165 CB VAL 20 3.043 14.263 9.398 1.00 0.16 ATOM 166 CG1 VAL 20 2.853 15.423 8.423 1.00 0.16 ATOM 167 CG2 VAL 20 3.561 14.472 10.818 1.00 0.16 ATOM 168 N ARG 21 -0.372 12.861 10.345 1.00 0.32 ATOM 169 CA ARG 21 -1.681 13.044 10.939 1.00 0.32 ATOM 170 C ARG 21 -1.709 14.093 12.041 1.00 0.32 ATOM 171 O ARG 21 -2.595 14.945 12.054 1.00 0.32 ATOM 172 CB ARG 21 -2.297 11.741 11.439 1.00 0.32 ATOM 173 CG ARG 21 -1.573 10.946 12.521 1.00 0.32 ATOM 174 CD ARG 21 -0.242 10.279 12.183 1.00 0.32 ATOM 175 NE ARG 21 0.472 9.826 13.377 1.00 0.32 ATOM 176 CZ ARG 21 1.265 10.591 14.138 1.00 0.32 ATOM 177 NH1 ARG 21 1.661 11.813 13.756 1.00 0.32 ATOM 178 NH2 ARG 21 1.707 10.191 15.337 1.00 0.32 ATOM 179 N CYS 22 -0.794 14.060 13.013 1.00 0.30 ATOM 180 CA CYS 22 -0.683 15.050 14.066 1.00 0.30 ATOM 181 C CYS 22 0.667 15.750 14.021 1.00 0.30 ATOM 182 O CYS 22 1.410 15.743 15.000 1.00 0.30 ATOM 183 CB CYS 22 -1.219 14.477 15.375 1.00 0.30 ATOM 184 SG CYS 22 -0.392 12.994 16.002 1.00 0.30 ATOM 185 N ASP 23 1.030 16.351 12.884 1.00 0.48 ATOM 186 CA ASP 23 2.174 17.213 12.669 1.00 0.48 ATOM 187 C ASP 23 1.962 18.557 13.353 1.00 0.48 ATOM 188 O ASP 23 1.430 19.472 12.729 1.00 0.48 ATOM 189 CB ASP 23 2.483 17.465 11.196 1.00 0.48 ATOM 190 CG ASP 23 3.920 17.896 10.934 1.00 0.48 ATOM 191 OD1 ASP 23 4.513 18.522 11.839 1.00 0.48 ATOM 192 OD2 ASP 23 4.501 17.636 9.859 1.00 0.48 ATOM 193 N GLU 24 2.278 18.730 14.640 1.00 0.82 ATOM 194 CA GLU 24 2.127 20.032 15.259 1.00 0.82 ATOM 195 C GLU 24 0.706 20.565 15.143 1.00 0.82 ATOM 196 O GLU 24 0.505 21.752 14.890 1.00 0.82 ATOM 197 CB GLU 24 3.246 20.941 14.757 1.00 0.82 ATOM 198 CG GLU 24 4.677 20.409 14.760 1.00 0.82 ATOM 199 CD GLU 24 5.763 21.446 14.507 1.00 0.82 ATOM 200 OE1 GLU 24 5.747 22.466 15.229 1.00 0.82 ATOM 201 OE2 GLU 24 6.685 21.272 13.681 1.00 0.82 ATOM 202 N SER 25 -0.324 19.722 15.260 1.00 0.53 ATOM 203 CA SER 25 -1.726 19.838 14.908 1.00 0.53 ATOM 204 C SER 25 -2.153 19.828 13.446 1.00 0.53 ATOM 205 O SER 25 -3.315 19.590 13.122 1.00 0.53 ATOM 206 CB SER 25 -2.471 20.897 15.714 1.00 0.53 ATOM 207 OG SER 25 -2.380 22.219 15.230 1.00 0.53 ATOM 208 N ASN 26 -1.254 19.970 12.467 1.00 0.40 ATOM 209 CA ASN 26 -1.492 19.768 11.051 1.00 0.40 ATOM 210 C ASN 26 -1.701 18.302 10.699 1.00 0.40 ATOM 211 O ASN 26 -0.811 17.482 10.916 1.00 0.40 ATOM 212 CB ASN 26 -0.396 20.446 10.233 1.00 0.40 ATOM 213 CG ASN 26 -0.476 20.184 8.736 1.00 0.40 ATOM 214 OD1 ASN 26 0.352 19.540 8.095 1.00 0.40 ATOM 215 ND2 ASN 26 -1.539 20.634 8.066 1.00 0.40 ATOM 216 N HIS 27 -2.836 17.927 10.103 1.00 0.29 ATOM 217 CA HIS 27 -3.041 16.716 9.334 1.00 0.29 ATOM 218 C HIS 27 -2.843 16.933 7.840 1.00 0.29 ATOM 219 O HIS 27 -3.668 17.575 7.194 1.00 0.29 ATOM 220 CB HIS 27 -4.359 16.057 9.731 1.00 0.29 ATOM 221 CG HIS 27 -5.601 16.904 9.709 1.00 0.29 ATOM 222 ND1 HIS 27 -6.065 17.626 8.622 1.00 0.29 ATOM 223 CD2 HIS 27 -6.479 17.155 10.737 1.00 0.29 ATOM 224 CE1 HIS 27 -7.164 18.295 9.007 1.00 0.29 ATOM 225 NE2 HIS 27 -7.439 18.062 10.293 1.00 0.29 ATOM 226 N CYS 28 -1.780 16.401 7.229 1.00 0.16 ATOM 227 CA CYS 28 -1.570 16.198 5.809 1.00 0.16 ATOM 228 C CYS 28 -0.857 14.876 5.557 1.00 0.16 ATOM 229 O CYS 28 -0.078 14.434 6.399 1.00 0.16 ATOM 230 CB CYS 28 -0.944 17.410 5.123 1.00 0.16 ATOM 231 SG CYS 28 -0.993 17.547 3.319 1.00 0.16 ATOM 232 N VAL 29 -1.100 14.178 4.444 1.00 0.12 ATOM 233 CA VAL 29 -0.517 12.909 4.055 1.00 0.12 ATOM 234 C VAL 29 0.478 13.131 2.924 1.00 0.12 ATOM 235 O VAL 29 0.092 13.764 1.944 1.00 0.12 ATOM 236 CB VAL 29 -1.548 11.831 3.732 1.00 0.12 ATOM 237 CG1 VAL 29 -2.545 11.513 4.844 1.00 0.12 ATOM 238 CG2 VAL 29 -2.458 12.183 2.557 1.00 0.12 ATOM 239 N GLU 30 1.735 12.685 2.994 1.00 0.20 ATOM 240 CA GLU 30 2.797 13.091 2.095 1.00 0.20 ATOM 241 C GLU 30 2.466 12.922 0.619 1.00 0.20 ATOM 242 O GLU 30 2.776 13.779 -0.206 1.00 0.20 ATOM 243 CB GLU 30 4.092 12.318 2.327 1.00 0.20 ATOM 244 CG GLU 30 3.957 10.806 2.167 1.00 0.20 ATOM 245 CD GLU 30 4.879 10.205 1.118 1.00 0.20 ATOM 246 OE1 GLU 30 5.277 10.925 0.178 1.00 0.20 ATOM 247 OE2 GLU 30 5.262 9.021 1.249 1.00 0.20 ATOM 248 N VAL 31 1.768 11.824 0.321 1.00 0.16 ATOM 249 CA VAL 31 1.200 11.548 -0.983 1.00 0.16 ATOM 250 C VAL 31 0.138 12.605 -1.250 1.00 0.16 ATOM 251 O VAL 31 0.589 13.522 -1.932 1.00 0.16 ATOM 252 CB VAL 31 0.769 10.104 -1.226 1.00 0.16 ATOM 253 CG1 VAL 31 2.025 9.240 -1.183 1.00 0.16 ATOM 254 CG2 VAL 31 -0.248 9.598 -0.208 1.00 0.16 ATOM 255 N ARG 32 -1.071 12.760 -0.706 1.00 0.29 ATOM 256 CA ARG 32 -1.937 13.888 -0.984 1.00 0.29 ATOM 257 C ARG 32 -1.271 15.252 -1.104 1.00 0.29 ATOM 258 O ARG 32 -1.561 15.957 -2.068 1.00 0.29 ATOM 259 CB ARG 32 -3.019 14.041 0.080 1.00 0.29 ATOM 260 CG ARG 32 -4.073 15.125 -0.124 1.00 0.29 ATOM 261 CD ARG 32 -4.731 15.338 1.236 1.00 0.29 ATOM 262 NE ARG 32 -5.804 16.330 1.164 1.00 0.29 ATOM 263 CZ ARG 32 -6.722 16.518 2.122 1.00 0.29 ATOM 264 NH1 ARG 32 -6.731 15.871 3.295 1.00 0.29 ATOM 265 NH2 ARG 32 -7.718 17.384 1.890 1.00 0.29 ATOM 266 N CYS 33 -0.404 15.687 -0.187 1.00 0.18 ATOM 267 CA CYS 33 0.293 16.953 -0.298 1.00 0.18 ATOM 268 C CYS 33 1.093 17.036 -1.591 1.00 0.18 ATOM 269 O CYS 33 1.130 18.086 -2.230 1.00 0.18 ATOM 270 CB CYS 33 1.127 17.251 0.946 1.00 0.18 ATOM 271 SG CYS 33 0.662 16.617 2.577 1.00 0.18 ATOM 272 N SER 34 1.643 15.917 -2.069 1.00 0.29 ATOM 273 CA SER 34 2.319 15.623 -3.318 1.00 0.29 ATOM 274 C SER 34 1.540 14.962 -4.447 1.00 0.29 ATOM 275 O SER 34 1.952 15.062 -5.600 1.00 0.29 ATOM 276 CB SER 34 3.635 14.910 -3.016 1.00 0.29 ATOM 277 OG SER 34 3.507 13.515 -2.854 1.00 0.29 ATOM 278 N ASP 35 0.346 14.378 -4.309 1.00 0.33 ATOM 279 CA ASP 35 -0.586 13.945 -5.332 1.00 0.33 ATOM 280 C ASP 35 -1.208 15.226 -5.868 1.00 0.33 ATOM 281 O ASP 35 -1.150 15.554 -7.052 1.00 0.33 ATOM 282 CB ASP 35 -1.704 13.032 -4.835 1.00 0.33 ATOM 283 CG ASP 35 -1.355 11.755 -4.084 1.00 0.33 ATOM 284 OD1 ASP 35 -0.326 11.120 -4.405 1.00 0.33 ATOM 285 OD2 ASP 35 -2.179 11.327 -3.247 1.00 0.33 ATOM 286 N THR 36 -1.731 16.040 -4.947 1.00 0.32 ATOM 287 CA THR 36 -2.262 17.360 -5.223 1.00 0.32 ATOM 288 C THR 36 -1.138 18.294 -5.651 1.00 0.32 ATOM 289 O THR 36 -1.358 18.990 -6.640 1.00 0.32 ATOM 290 CB THR 36 -3.153 17.871 -4.094 1.00 0.32 ATOM 291 OG1 THR 36 -2.418 18.223 -2.945 1.00 0.32 ATOM 292 CG2 THR 36 -4.232 16.897 -3.628 1.00 0.32 ATOM 293 N LYS 37 0.074 18.247 -5.091 1.00 0.47 ATOM 294 CA LYS 37 1.386 18.313 -5.703 1.00 0.47 ATOM 295 C LYS 37 1.425 18.085 -7.208 1.00 0.47 ATOM 296 O LYS 37 1.120 18.973 -8.003 1.00 0.47 ATOM 297 CB LYS 37 2.451 19.267 -5.167 1.00 0.47 ATOM 298 CG LYS 37 2.244 20.434 -4.205 1.00 0.47 ATOM 299 CD LYS 37 1.740 21.822 -4.593 1.00 0.47 ATOM 300 CE LYS 37 0.349 21.847 -5.219 1.00 0.47 ATOM 301 NZ LYS 37 0.403 20.980 -6.406 1.00 0.47 ATOM 302 N TYR 38 1.783 16.873 -7.643 1.00 0.35 ATOM 303 CA TYR 38 2.163 16.455 -8.978 1.00 0.35 ATOM 304 C TYR 38 1.032 16.609 -9.986 1.00 0.35 ATOM 305 O TYR 38 1.291 16.836 -11.166 1.00 0.35 ATOM 306 CB TYR 38 2.716 15.040 -8.829 1.00 0.35 ATOM 307 CG TYR 38 3.799 14.784 -7.809 1.00 0.35 ATOM 308 CD1 TYR 38 3.913 13.535 -7.187 1.00 0.35 ATOM 309 CD2 TYR 38 4.655 15.804 -7.377 1.00 0.35 ATOM 310 CE1 TYR 38 4.841 13.299 -6.164 1.00 0.35 ATOM 311 CE2 TYR 38 5.579 15.605 -6.344 1.00 0.35 ATOM 312 CZ TYR 38 5.689 14.339 -5.735 1.00 0.35 ATOM 313 OH TYR 38 6.543 14.137 -4.689 1.00 0.35 ATOM 314 N THR 39 -0.245 16.520 -9.605 1.00 0.44 ATOM 315 CA THR 39 -1.399 16.622 -10.476 1.00 0.44 ATOM 316 C THR 39 -1.745 18.025 -10.955 1.00 0.44 ATOM 317 O THR 39 -2.436 18.169 -11.961 1.00 0.44 ATOM 318 CB THR 39 -2.666 15.999 -9.895 1.00 0.44 ATOM 319 OG1 THR 39 -3.030 16.662 -8.705 1.00 0.44 ATOM 320 CG2 THR 39 -2.564 14.509 -9.581 1.00 0.44 ATOM 321 N LEU 40 -1.318 19.093 -10.275 1.00 0.29 ATOM 322 CA LEU 40 -1.365 20.471 -10.725 1.00 0.29 ATOM 323 C LEU 40 -0.004 21.100 -10.996 1.00 0.29 ATOM 324 O LEU 40 0.035 22.077 -11.741 1.00 0.29 ATOM 325 CB LEU 40 -2.303 21.322 -9.875 1.00 0.29 ATOM 326 CG LEU 40 -1.714 21.693 -8.516 1.00 0.29 ATOM 327 CD1 LEU 40 -0.869 22.964 -8.508 1.00 0.29 ATOM 328 CD2 LEU 40 -2.738 21.826 -7.393 1.00 0.29 ATOM 329 N CYS 41 1.118 20.632 -10.443 1.00 0.40 ATOM 330 CA CYS 41 2.460 21.100 -10.725 1.00 0.40 ATOM 331 C CYS 41 3.591 20.082 -10.779 1.00 0.40 ATOM 332 CB CYS 41 2.810 22.359 -9.936 1.00 0.40 ATOM 333 SG CYS 41 2.741 22.150 -8.139 1.00 0.40 TER END