####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS473_4 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS473_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 17 - 41 4.61 15.31 LCS_AVERAGE: 59.07 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 1 - 20 1.77 11.59 LCS_AVERAGE: 33.37 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 2 - 17 0.87 11.51 LCS_AVERAGE: 23.62 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 20 23 3 3 7 11 12 18 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT Q 2 Q 2 16 20 23 8 15 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT E 3 E 3 16 20 23 11 15 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT T 4 T 4 16 20 23 11 15 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT R 5 R 5 16 20 23 11 15 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT K 6 K 6 16 20 23 11 15 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT K 7 K 7 16 20 23 11 15 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT C 8 C 8 16 20 23 11 15 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT T 9 T 9 16 20 23 11 15 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT E 10 E 10 16 20 23 11 15 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT M 11 M 11 16 20 23 11 15 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT K 12 K 12 16 20 23 11 15 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT K 13 K 13 16 20 23 11 15 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT K 14 K 14 16 20 23 9 15 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT F 15 F 15 16 20 23 4 15 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT K 16 K 16 16 20 23 3 4 9 16 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT N 17 N 17 16 20 25 3 4 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT C 18 C 18 5 20 25 0 4 5 5 9 18 19 21 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT E 19 E 19 3 20 25 4 15 16 17 19 19 20 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT V 20 V 20 5 20 25 3 4 4 9 13 18 21 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT R 21 R 21 5 6 25 3 4 4 9 13 18 21 22 22 23 24 25 25 27 27 27 28 28 29 30 LCS_GDT C 22 C 22 5 6 25 3 4 4 8 13 18 21 22 22 23 23 23 23 24 24 26 28 28 29 30 LCS_GDT D 23 D 23 5 6 25 3 4 5 9 13 18 21 22 22 23 23 23 23 24 24 24 26 27 28 28 LCS_GDT E 24 E 24 5 6 25 3 4 4 7 12 18 21 22 22 23 23 23 23 24 24 24 26 27 28 28 LCS_GDT S 25 S 25 4 6 25 3 4 4 5 13 18 21 22 22 23 23 23 23 24 24 24 26 27 28 28 LCS_GDT N 26 N 26 4 8 25 3 4 4 5 13 18 21 22 22 23 23 23 23 24 24 24 26 27 28 28 LCS_GDT H 27 H 27 8 9 25 4 6 8 9 13 18 21 22 22 23 23 23 23 24 24 24 26 27 28 28 LCS_GDT C 28 C 28 8 9 25 4 7 8 9 13 18 21 22 22 23 23 23 23 24 24 24 26 27 29 30 LCS_GDT V 29 V 29 8 9 25 4 7 8 9 13 18 21 22 22 23 23 23 24 27 27 27 28 28 29 30 LCS_GDT E 30 E 30 8 9 25 4 7 8 10 14 18 21 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT V 31 V 31 8 9 25 4 7 10 17 19 19 21 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT R 32 R 32 8 9 25 4 7 8 9 13 18 21 22 22 23 23 23 25 26 26 26 27 28 28 29 LCS_GDT C 33 C 33 8 9 25 3 7 8 9 13 18 21 22 22 23 23 23 23 24 24 25 26 27 28 28 LCS_GDT S 34 S 34 8 9 25 3 7 8 9 13 18 21 22 22 23 23 23 23 24 24 24 26 27 28 28 LCS_GDT D 35 D 35 4 9 25 3 4 4 8 13 18 21 22 22 23 23 23 23 24 24 24 26 27 28 28 LCS_GDT T 36 T 36 4 7 25 3 4 4 9 13 18 21 22 22 23 23 23 23 24 24 25 26 27 28 28 LCS_GDT K 37 K 37 5 7 25 3 4 5 9 13 18 21 22 22 23 23 23 23 26 26 26 27 27 28 29 LCS_GDT Y 38 Y 38 5 7 25 3 4 5 17 19 19 21 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT T 39 T 39 5 7 25 3 4 5 9 14 18 21 23 24 24 24 25 25 27 27 27 28 28 29 30 LCS_GDT L 40 L 40 5 7 25 3 4 5 9 13 18 21 22 22 23 23 23 24 27 27 27 28 28 29 30 LCS_GDT C 41 C 41 5 7 25 3 4 5 9 13 18 21 22 22 23 23 23 23 24 24 24 26 27 28 30 LCS_AVERAGE LCS_A: 38.69 ( 23.62 33.37 59.07 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 15 16 17 19 19 21 23 24 24 24 25 25 27 27 27 28 28 29 30 GDT PERCENT_AT 26.83 36.59 39.02 41.46 46.34 46.34 51.22 56.10 58.54 58.54 58.54 60.98 60.98 65.85 65.85 65.85 68.29 68.29 70.73 73.17 GDT RMS_LOCAL 0.31 0.54 0.66 0.87 1.20 1.20 2.41 2.12 2.32 2.32 2.32 2.71 2.71 3.63 3.63 3.63 4.14 4.00 4.80 5.23 GDT RMS_ALL_AT 11.60 11.55 11.58 11.56 11.52 11.52 15.81 11.29 11.32 11.32 11.32 11.23 11.23 11.09 11.09 11.09 11.04 11.16 11.00 11.02 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 10 E 10 # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: D 35 D 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 3.436 0 0.154 0.640 6.019 12.727 10.303 5.371 LGA Q 2 Q 2 1.938 0 0.235 1.404 3.996 61.818 44.444 3.996 LGA E 3 E 3 0.547 0 0.086 1.161 5.051 81.818 60.000 2.225 LGA T 4 T 4 0.913 0 0.026 1.109 2.658 81.818 67.273 2.658 LGA R 5 R 5 1.424 0 0.060 1.631 10.687 65.455 27.934 10.687 LGA K 6 K 6 1.087 0 0.035 1.289 5.720 69.545 45.859 5.560 LGA K 7 K 7 0.430 0 0.047 0.635 2.108 95.455 74.747 1.918 LGA C 8 C 8 0.570 0 0.036 0.748 2.710 86.364 75.758 2.710 LGA T 9 T 9 0.929 0 0.035 0.080 1.329 81.818 74.805 1.208 LGA E 10 E 10 0.557 0 0.030 0.998 3.824 90.909 60.606 3.824 LGA M 11 M 11 0.253 0 0.115 1.564 7.443 95.455 61.364 7.443 LGA K 12 K 12 0.535 0 0.035 0.709 2.430 86.364 78.182 2.430 LGA K 13 K 13 0.555 0 0.034 0.623 2.656 81.818 73.939 2.656 LGA K 14 K 14 0.473 0 0.082 0.538 1.932 86.818 86.667 1.932 LGA F 15 F 15 0.880 0 0.414 0.370 3.065 62.727 52.562 2.774 LGA K 16 K 16 2.081 0 0.134 1.242 6.668 62.727 33.131 6.668 LGA N 17 N 17 2.134 0 0.656 0.820 7.557 35.000 19.773 7.557 LGA C 18 C 18 5.272 0 0.690 0.659 9.606 8.182 5.455 9.606 LGA E 19 E 19 2.049 0 0.331 1.313 5.379 43.182 28.687 4.000 LGA V 20 V 20 3.709 0 0.593 0.614 7.810 8.636 4.935 7.516 LGA R 21 R 21 7.393 0 0.072 0.825 13.353 0.000 0.000 10.465 LGA C 22 C 22 12.418 0 0.150 0.217 15.262 0.000 0.000 10.507 LGA D 23 D 23 18.726 0 0.652 0.685 22.288 0.000 0.000 17.204 LGA E 24 E 24 24.159 0 0.062 1.355 28.388 0.000 0.000 28.388 LGA S 25 S 25 25.870 0 0.606 0.579 26.668 0.000 0.000 24.915 LGA N 26 N 26 25.764 0 0.130 1.168 26.299 0.000 0.000 26.299 LGA H 27 H 27 22.369 0 0.520 0.571 29.217 0.000 0.000 29.217 LGA C 28 C 28 16.293 0 0.041 0.772 18.592 0.000 0.000 16.551 LGA V 29 V 29 10.225 0 0.034 0.055 12.454 0.000 0.000 7.950 LGA E 30 E 30 4.496 0 0.109 0.977 6.856 6.364 17.172 3.995 LGA V 31 V 31 2.621 0 0.101 0.123 5.250 23.636 26.753 5.221 LGA R 32 R 32 8.606 0 0.150 1.232 12.264 0.000 0.000 9.680 LGA C 33 C 33 14.268 0 0.181 0.264 17.924 0.000 0.000 12.692 LGA S 34 S 34 19.836 0 0.108 0.666 21.521 0.000 0.000 20.917 LGA D 35 D 35 19.565 0 0.046 1.005 21.583 0.000 0.000 21.583 LGA T 36 T 36 15.690 0 0.400 0.864 19.238 0.000 0.000 19.238 LGA K 37 K 37 9.568 0 0.049 1.104 11.577 0.000 0.000 5.993 LGA Y 38 Y 38 3.183 0 0.156 1.173 7.944 18.636 8.333 7.944 LGA T 39 T 39 4.058 0 0.106 0.096 6.945 17.727 14.805 2.714 LGA L 40 L 40 10.026 0 0.108 0.998 13.452 0.000 0.000 8.455 LGA C 41 C 41 15.951 0 0.052 0.177 19.906 0.000 0.000 13.221 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 10.979 11.029 11.147 33.293 25.695 10.333 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 23 2.12 50.000 46.672 1.034 LGA_LOCAL RMSD: 2.124 Number of atoms: 23 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.289 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 10.979 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.742776 * X + 0.428909 * Y + 0.514121 * Z + 1.036865 Y_new = -0.481409 * X + -0.191541 * Y + 0.855311 * Z + 2.375679 Z_new = 0.465326 * X + -0.882807 * Y + 0.064209 * Z + -1.072989 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.575054 -0.484003 -1.498192 [DEG: -32.9482 -27.7313 -85.8401 ] ZXZ: 2.600370 1.506544 2.656502 [DEG: 148.9902 86.3186 152.2064 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS473_4 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS473_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 23 2.12 46.672 10.98 REMARK ---------------------------------------------------------- MOLECULE T0955TS473_4 PFRMAT TS TARGET T0955 MODEL 4 PARENT N/A ATOM 1 N SER 1 -3.552 -11.965 0.416 1.00 5.22 ATOM 5 CA SER 1 -2.452 -12.915 0.662 1.00 5.22 ATOM 6 CB SER 1 -1.779 -13.291 -0.683 1.00 5.82 ATOM 7 OG SER 1 -1.036 -12.205 -1.234 1.00 5.82 ATOM 9 C SER 1 -1.427 -12.327 1.586 1.00 5.22 ATOM 10 O SER 1 -1.485 -11.144 1.933 1.00 5.22 ATOM 11 N GLN 2 -0.453 -13.176 1.995 1.00 4.01 ATOM 13 CA GLN 2 0.627 -12.765 2.857 1.00 4.01 ATOM 14 CB GLN 2 1.479 -13.921 3.422 1.00 4.58 ATOM 15 CG GLN 2 0.753 -14.768 4.477 1.00 4.58 ATOM 16 CD GLN 2 0.418 -13.886 5.686 1.00 4.58 ATOM 17 OE1 GLN 2 1.259 -13.193 6.262 1.00 4.58 ATOM 18 NE2 GLN 2 -0.884 -13.877 6.063 1.00 4.58 ATOM 21 C GLN 2 1.521 -11.798 2.152 1.00 4.01 ATOM 22 O GLN 2 1.994 -10.855 2.780 1.00 4.01 ATOM 23 N GLU 3 1.728 -11.986 0.826 1.00 4.01 ATOM 25 CA GLU 3 2.557 -11.124 0.018 1.00 4.01 ATOM 26 CB GLU 3 2.674 -11.663 -1.424 1.00 4.58 ATOM 27 CG GLU 3 3.584 -10.854 -2.360 1.00 4.58 ATOM 28 CD GLU 3 3.651 -11.447 -3.769 1.00 4.58 ATOM 29 OE1 GLU 3 3.051 -12.520 -4.052 1.00 4.58 ATOM 30 OE2 GLU 3 4.318 -10.790 -4.611 1.00 4.58 ATOM 31 C GLU 3 1.954 -9.739 -0.044 1.00 4.01 ATOM 32 O GLU 3 2.665 -8.748 0.136 1.00 4.01 ATOM 33 N THR 4 0.613 -9.658 -0.233 1.00 4.01 ATOM 35 CA THR 4 -0.112 -8.413 -0.326 1.00 4.01 ATOM 36 CB THR 4 -1.551 -8.648 -0.748 1.00 4.58 ATOM 37 CG2 THR 4 -2.316 -7.314 -0.876 1.00 4.58 ATOM 38 OG1 THR 4 -1.565 -9.279 -2.022 1.00 4.58 ATOM 40 C THR 4 -0.063 -7.692 1.003 1.00 4.01 ATOM 41 O THR 4 0.159 -6.480 1.036 1.00 4.01 ATOM 42 N ARG 5 -0.204 -8.444 2.122 1.00 4.01 ATOM 44 CA ARG 5 -0.187 -7.907 3.460 1.00 4.01 ATOM 45 CB ARG 5 -0.464 -9.005 4.506 1.00 4.58 ATOM 46 CG ARG 5 -0.574 -8.529 5.958 1.00 4.58 ATOM 47 CD ARG 5 -0.645 -9.668 6.982 1.00 4.58 ATOM 48 NE ARG 5 0.657 -10.410 6.941 1.00 4.58 ATOM 50 CZ ARG 5 1.795 -9.941 7.548 1.00 4.58 ATOM 51 NH1 ARG 5 2.951 -10.651 7.406 1.00 4.58 ATOM 54 NH2 ARG 5 1.808 -8.786 8.281 1.00 4.58 ATOM 57 C ARG 5 1.160 -7.300 3.762 1.00 4.01 ATOM 58 O ARG 5 1.223 -6.194 4.301 1.00 4.01 ATOM 59 N LYS 6 2.258 -7.987 3.359 1.00 4.01 ATOM 61 CA LYS 6 3.611 -7.538 3.586 1.00 4.01 ATOM 62 CB LYS 6 4.649 -8.608 3.209 1.00 4.58 ATOM 63 CG LYS 6 4.648 -9.784 4.189 1.00 4.58 ATOM 64 CD LYS 6 5.588 -10.928 3.813 1.00 4.58 ATOM 65 CE LYS 6 5.494 -12.114 4.774 1.00 4.58 ATOM 66 NZ LYS 6 6.318 -13.236 4.282 1.00 4.58 ATOM 70 C LYS 6 3.895 -6.281 2.819 1.00 4.01 ATOM 71 O LYS 6 4.509 -5.368 3.369 1.00 4.01 ATOM 72 N LYS 7 3.405 -6.188 1.557 1.00 4.01 ATOM 74 CA LYS 7 3.602 -5.021 0.730 1.00 4.01 ATOM 75 CB LYS 7 3.165 -5.243 -0.728 1.00 4.58 ATOM 76 CG LYS 7 4.122 -6.181 -1.461 1.00 4.58 ATOM 77 CD LYS 7 3.771 -6.489 -2.913 1.00 4.58 ATOM 78 CE LYS 7 4.776 -7.463 -3.529 1.00 4.58 ATOM 79 NZ LYS 7 4.370 -7.853 -4.890 1.00 4.58 ATOM 83 C LYS 7 2.872 -3.831 1.292 1.00 4.01 ATOM 84 O LYS 7 3.417 -2.726 1.298 1.00 4.01 ATOM 85 N CYS 8 1.642 -4.045 1.823 1.00 4.01 ATOM 87 CA CYS 8 0.841 -3.000 2.411 1.00 4.01 ATOM 88 CB CYS 8 -0.580 -3.462 2.781 1.00 4.58 ATOM 89 SG CYS 8 -1.613 -3.781 1.320 1.00 4.58 ATOM 90 C CYS 8 1.493 -2.477 3.665 1.00 4.01 ATOM 91 O CYS 8 1.516 -1.264 3.874 1.00 4.01 ATOM 92 N THR 9 2.087 -3.380 4.492 1.00 4.01 ATOM 94 CA THR 9 2.750 -3.023 5.728 1.00 4.01 ATOM 95 CB THR 9 3.155 -4.249 6.531 1.00 4.58 ATOM 96 CG2 THR 9 3.841 -3.841 7.853 1.00 4.58 ATOM 97 OG1 THR 9 1.997 -5.003 6.862 1.00 4.58 ATOM 99 C THR 9 3.972 -2.189 5.408 1.00 4.01 ATOM 100 O THR 9 4.194 -1.168 6.061 1.00 4.01 ATOM 101 N GLU 10 4.744 -2.572 4.358 1.00 4.01 ATOM 103 CA GLU 10 5.934 -1.857 3.958 1.00 4.01 ATOM 104 CB GLU 10 6.754 -2.593 2.878 1.00 4.58 ATOM 105 CG GLU 10 7.459 -3.868 3.376 1.00 4.58 ATOM 106 CD GLU 10 8.409 -3.562 4.536 1.00 4.58 ATOM 107 OE1 GLU 10 9.296 -2.679 4.391 1.00 4.58 ATOM 108 OE2 GLU 10 8.242 -4.211 5.602 1.00 4.58 ATOM 109 C GLU 10 5.604 -0.480 3.457 1.00 4.01 ATOM 110 O GLU 10 6.320 0.472 3.771 1.00 4.01 ATOM 111 N MET 11 4.480 -0.349 2.712 1.00 4.01 ATOM 113 CA MET 11 4.003 0.897 2.162 1.00 4.01 ATOM 114 CB MET 11 2.752 0.670 1.280 1.00 4.58 ATOM 115 CG MET 11 2.096 1.905 0.650 1.00 4.58 ATOM 116 SD MET 11 0.921 2.811 1.709 1.00 4.58 ATOM 117 CE MET 11 -0.406 1.571 1.648 1.00 4.58 ATOM 118 C MET 11 3.633 1.839 3.277 1.00 4.01 ATOM 119 O MET 11 4.062 2.991 3.264 1.00 4.01 ATOM 120 N LYS 12 2.979 1.311 4.336 1.00 4.01 ATOM 122 CA LYS 12 2.558 2.084 5.475 1.00 4.01 ATOM 123 CB LYS 12 1.525 1.342 6.334 1.00 4.58 ATOM 124 CG LYS 12 0.189 1.273 5.593 1.00 4.58 ATOM 125 CD LYS 12 -0.940 0.534 6.300 1.00 4.58 ATOM 126 CE LYS 12 -2.215 0.516 5.457 1.00 4.58 ATOM 127 NZ LYS 12 -3.272 -0.247 6.143 1.00 4.58 ATOM 131 C LYS 12 3.715 2.538 6.306 1.00 4.01 ATOM 132 O LYS 12 3.672 3.638 6.853 1.00 4.01 ATOM 133 N LYS 13 4.773 1.703 6.418 1.00 4.01 ATOM 135 CA LYS 13 5.949 2.050 7.174 1.00 4.01 ATOM 136 CB LYS 13 6.943 0.886 7.326 1.00 4.58 ATOM 137 CG LYS 13 6.514 -0.239 8.263 1.00 4.58 ATOM 138 CD LYS 13 7.561 -1.348 8.325 1.00 4.58 ATOM 139 CE LYS 13 7.216 -2.491 9.275 1.00 4.58 ATOM 140 NZ LYS 13 8.252 -3.536 9.180 1.00 4.58 ATOM 144 C LYS 13 6.708 3.161 6.505 1.00 4.01 ATOM 145 O LYS 13 7.168 4.081 7.183 1.00 4.01 ATOM 146 N LYS 14 6.829 3.103 5.157 1.00 4.01 ATOM 148 CA LYS 14 7.558 4.092 4.404 1.00 4.01 ATOM 149 CB LYS 14 7.837 3.615 2.967 1.00 4.58 ATOM 150 CG LYS 14 8.859 2.476 2.903 1.00 4.58 ATOM 151 CD LYS 14 9.155 1.974 1.488 1.00 4.58 ATOM 152 CE LYS 14 10.073 0.747 1.433 1.00 4.58 ATOM 153 NZ LYS 14 11.426 1.089 1.919 1.00 4.58 ATOM 157 C LYS 14 6.848 5.415 4.327 1.00 4.01 ATOM 158 O LYS 14 7.448 6.455 4.602 1.00 4.01 ATOM 159 N PHE 15 5.547 5.391 3.973 1.00 4.01 ATOM 161 CA PHE 15 4.742 6.578 3.840 1.00 4.01 ATOM 162 CB PHE 15 3.540 6.426 2.882 1.00 4.58 ATOM 163 CG PHE 15 3.986 6.361 1.458 1.00 4.58 ATOM 164 CD1 PHE 15 4.031 5.130 0.795 1.00 4.58 ATOM 165 CE1 PHE 15 4.441 5.045 -0.536 1.00 4.58 ATOM 166 CZ PHE 15 4.806 6.208 -1.219 1.00 4.58 ATOM 167 CE2 PHE 15 4.762 7.445 -0.571 1.00 4.58 ATOM 168 CD2 PHE 15 4.350 7.521 0.762 1.00 4.58 ATOM 169 C PHE 15 4.166 7.013 5.149 1.00 4.01 ATOM 170 O PHE 15 3.774 6.186 5.970 1.00 4.01 ATOM 171 N LYS 16 4.136 8.346 5.381 1.00 5.22 ATOM 173 CA LYS 16 3.555 8.909 6.576 1.00 5.22 ATOM 174 CB LYS 16 3.862 10.402 6.771 1.00 5.82 ATOM 175 CG LYS 16 5.303 10.757 7.126 1.00 5.82 ATOM 176 CD LYS 16 5.458 12.265 7.303 1.00 5.82 ATOM 177 CE LYS 16 6.871 12.725 7.640 1.00 5.82 ATOM 178 NZ LYS 16 6.870 14.193 7.775 1.00 5.82 ATOM 182 C LYS 16 2.053 8.807 6.443 1.00 5.22 ATOM 183 O LYS 16 1.353 8.475 7.399 1.00 5.22 ATOM 184 N ASN 17 1.547 9.102 5.220 1.00 5.22 ATOM 186 CA ASN 17 0.156 9.074 4.847 1.00 5.22 ATOM 187 CB ASN 17 -0.025 9.742 3.466 1.00 5.82 ATOM 188 CG ASN 17 -1.473 9.955 3.059 1.00 5.82 ATOM 189 OD1 ASN 17 -2.216 9.018 2.793 1.00 5.82 ATOM 190 ND2 ASN 17 -1.874 11.248 2.939 1.00 5.82 ATOM 193 C ASN 17 -0.271 7.627 4.796 1.00 5.22 ATOM 194 O ASN 17 0.412 6.790 4.202 1.00 5.22 ATOM 195 N CYS 18 -1.411 7.312 5.448 1.00 5.22 ATOM 197 CA CYS 18 -1.934 5.970 5.507 1.00 5.22 ATOM 198 CB CYS 18 -2.501 5.634 6.896 1.00 5.82 ATOM 199 SG CYS 18 -1.220 5.658 8.186 1.00 5.82 ATOM 200 C CYS 18 -2.997 5.662 4.491 1.00 5.22 ATOM 201 O CYS 18 -3.333 4.490 4.292 1.00 5.22 ATOM 202 N GLU 19 -3.544 6.697 3.820 1.00 5.22 ATOM 204 CA GLU 19 -4.582 6.565 2.824 1.00 5.22 ATOM 205 CB GLU 19 -5.191 7.924 2.401 1.00 5.82 ATOM 206 CG GLU 19 -5.881 8.723 3.522 1.00 5.82 ATOM 207 CD GLU 19 -7.269 8.162 3.809 1.00 5.82 ATOM 208 OE1 GLU 19 -8.255 8.809 3.376 1.00 5.82 ATOM 209 OE2 GLU 19 -7.376 7.101 4.479 1.00 5.82 ATOM 210 C GLU 19 -4.077 5.875 1.586 1.00 5.22 ATOM 211 O GLU 19 -2.869 5.762 1.366 1.00 5.22 ATOM 212 N VAL 20 -5.034 5.369 0.761 1.00 5.22 ATOM 214 CA VAL 20 -4.785 4.668 -0.484 1.00 5.22 ATOM 215 CB VAL 20 -6.103 4.250 -1.129 1.00 5.82 ATOM 216 CG1 VAL 20 -5.914 3.694 -2.551 1.00 5.82 ATOM 217 CG2 VAL 20 -6.777 3.214 -0.209 1.00 5.82 ATOM 218 C VAL 20 -4.005 5.604 -1.378 1.00 5.22 ATOM 219 O VAL 20 -3.015 5.190 -1.985 1.00 5.22 ATOM 220 N ARG 21 -4.442 6.886 -1.453 1.00 4.01 ATOM 222 CA ARG 21 -3.736 7.874 -2.210 1.00 4.01 ATOM 223 CB ARG 21 -4.612 8.899 -2.950 1.00 4.58 ATOM 224 CG ARG 21 -5.465 8.314 -4.079 1.00 4.58 ATOM 225 CD ARG 21 -6.417 9.334 -4.712 1.00 4.58 ATOM 226 NE ARG 21 -5.616 10.425 -5.355 1.00 4.58 ATOM 228 CZ ARG 21 -5.056 10.317 -6.603 1.00 4.58 ATOM 229 NH1 ARG 21 -4.316 11.358 -7.081 1.00 4.58 ATOM 232 NH2 ARG 21 -5.213 9.207 -7.385 1.00 4.58 ATOM 235 C ARG 21 -2.889 8.601 -1.208 1.00 4.01 ATOM 236 O ARG 21 -3.396 9.290 -0.321 1.00 4.01 ATOM 237 N CYS 22 -1.559 8.416 -1.342 1.00 4.01 ATOM 239 CA CYS 22 -0.587 9.034 -0.495 1.00 4.01 ATOM 240 CB CYS 22 0.739 8.261 -0.413 1.00 4.58 ATOM 241 SG CYS 22 0.524 6.621 0.343 1.00 4.58 ATOM 242 C CYS 22 -0.340 10.397 -1.050 1.00 4.01 ATOM 243 O CYS 22 0.213 10.559 -2.143 1.00 4.01 ATOM 244 N ASP 23 -0.807 11.375 -0.249 1.00 4.01 ATOM 246 CA ASP 23 -0.762 12.792 -0.477 1.00 4.01 ATOM 247 CB ASP 23 -1.865 13.534 0.310 1.00 4.58 ATOM 248 CG ASP 23 -3.262 13.120 -0.151 1.00 4.58 ATOM 249 OD1 ASP 23 -3.552 13.136 -1.377 1.00 4.58 ATOM 250 OD2 ASP 23 -4.071 12.770 0.747 1.00 4.58 ATOM 251 C ASP 23 0.537 13.418 -0.061 1.00 4.01 ATOM 252 O ASP 23 0.879 14.490 -0.562 1.00 4.01 ATOM 253 N GLU 24 1.290 12.763 0.861 1.00 5.22 ATOM 255 CA GLU 24 2.543 13.269 1.379 1.00 5.22 ATOM 256 CB GLU 24 3.189 12.344 2.428 1.00 5.82 ATOM 257 CG GLU 24 2.532 12.383 3.813 1.00 5.82 ATOM 258 CD GLU 24 2.652 13.777 4.433 1.00 5.82 ATOM 259 OE1 GLU 24 3.794 14.298 4.554 1.00 5.82 ATOM 260 OE2 GLU 24 1.590 14.346 4.792 1.00 5.82 ATOM 261 C GLU 24 3.579 13.530 0.334 1.00 5.22 ATOM 262 O GLU 24 4.302 14.523 0.430 1.00 5.22 ATOM 263 N SER 25 3.664 12.648 -0.681 1.00 5.22 ATOM 265 CA SER 25 4.601 12.795 -1.762 1.00 5.22 ATOM 266 CB SER 25 4.815 11.480 -2.526 1.00 5.82 ATOM 267 OG SER 25 5.357 10.495 -1.658 1.00 5.82 ATOM 269 C SER 25 4.111 13.860 -2.708 1.00 5.22 ATOM 270 O SER 25 2.907 14.124 -2.789 1.00 5.22 ATOM 271 N ASN 26 5.056 14.516 -3.432 1.00 5.22 ATOM 273 CA ASN 26 4.741 15.559 -4.388 1.00 5.22 ATOM 274 CB ASN 26 5.996 16.248 -4.956 1.00 5.82 ATOM 275 CG ASN 26 6.484 17.263 -3.927 1.00 5.82 ATOM 276 OD1 ASN 26 5.844 18.284 -3.670 1.00 5.82 ATOM 277 ND2 ASN 26 7.644 16.964 -3.288 1.00 5.82 ATOM 280 C ASN 26 3.947 14.954 -5.511 1.00 5.22 ATOM 281 O ASN 26 2.977 15.554 -5.978 1.00 5.22 ATOM 282 N HIS 27 4.356 13.745 -5.964 1.00 5.22 ATOM 284 CA HIS 27 3.652 13.008 -6.977 1.00 5.22 ATOM 285 CB HIS 27 4.544 12.070 -7.815 1.00 5.82 ATOM 286 CG HIS 27 5.593 12.806 -8.588 1.00 5.82 ATOM 287 ND1 HIS 27 5.365 13.501 -9.756 1.00 5.82 ATOM 288 CE1 HIS 27 6.551 14.053 -10.118 1.00 5.82 ATOM 289 NE2 HIS 27 7.519 13.762 -9.269 1.00 5.82 ATOM 290 CD2 HIS 27 6.914 12.974 -8.308 1.00 5.82 ATOM 291 C HIS 27 2.759 12.156 -6.126 1.00 5.22 ATOM 292 O HIS 27 3.258 11.441 -5.252 1.00 5.22 ATOM 293 N CYS 28 1.425 12.218 -6.350 1.00 4.01 ATOM 295 CA CYS 28 0.494 11.448 -5.557 1.00 4.01 ATOM 296 CB CYS 28 -0.981 11.793 -5.816 1.00 4.58 ATOM 297 SG CYS 28 -2.111 10.832 -4.768 1.00 4.58 ATOM 298 C CYS 28 0.708 9.998 -5.863 1.00 4.01 ATOM 299 O CYS 28 0.735 9.609 -7.031 1.00 4.01 ATOM 300 N VAL 29 0.900 9.179 -4.805 1.00 4.01 ATOM 302 CA VAL 29 1.135 7.777 -5.045 1.00 4.01 ATOM 303 CB VAL 29 2.262 7.185 -4.207 1.00 4.58 ATOM 304 CG1 VAL 29 2.445 5.684 -4.531 1.00 4.58 ATOM 305 CG2 VAL 29 3.545 8.009 -4.418 1.00 4.58 ATOM 306 C VAL 29 -0.152 7.064 -4.761 1.00 4.01 ATOM 307 O VAL 29 -0.575 6.991 -3.612 1.00 4.01 ATOM 308 N GLU 30 -0.810 6.536 -5.812 1.00 4.01 ATOM 310 CA GLU 30 -2.036 5.805 -5.645 1.00 4.01 ATOM 311 CB GLU 30 -2.989 5.935 -6.850 1.00 4.58 ATOM 312 CG GLU 30 -4.341 5.230 -6.678 1.00 4.58 ATOM 313 CD GLU 30 -5.182 5.439 -7.933 1.00 4.58 ATOM 314 OE1 GLU 30 -5.529 4.414 -8.577 1.00 4.58 ATOM 315 OE2 GLU 30 -5.513 6.607 -8.266 1.00 4.58 ATOM 316 C GLU 30 -1.605 4.377 -5.476 1.00 4.01 ATOM 317 O GLU 30 -1.018 3.789 -6.386 1.00 4.01 ATOM 318 N VAL 31 -1.867 3.810 -4.278 1.00 4.01 ATOM 320 CA VAL 31 -1.487 2.456 -3.989 1.00 4.01 ATOM 321 CB VAL 31 -0.917 2.274 -2.587 1.00 4.58 ATOM 322 CG1 VAL 31 -0.532 0.796 -2.337 1.00 4.58 ATOM 323 CG2 VAL 31 0.250 3.258 -2.377 1.00 4.58 ATOM 324 C VAL 31 -2.714 1.611 -4.149 1.00 4.01 ATOM 325 O VAL 31 -3.662 1.718 -3.369 1.00 4.01 ATOM 326 N ARG 32 -2.707 0.748 -5.185 1.00 4.01 ATOM 328 CA ARG 32 -3.800 -0.146 -5.442 1.00 4.01 ATOM 329 CB ARG 32 -3.981 -0.409 -6.943 1.00 4.58 ATOM 330 CG ARG 32 -4.330 0.857 -7.715 1.00 4.58 ATOM 331 CD ARG 32 -4.356 0.659 -9.221 1.00 4.58 ATOM 332 NE ARG 32 -4.616 2.001 -9.806 1.00 4.58 ATOM 334 CZ ARG 32 -4.678 2.203 -11.156 1.00 4.58 ATOM 335 NH1 ARG 32 -4.971 3.459 -11.598 1.00 4.58 ATOM 338 NH2 ARG 32 -4.456 1.192 -12.051 1.00 4.58 ATOM 341 C ARG 32 -3.345 -1.392 -4.754 1.00 4.01 ATOM 342 O ARG 32 -2.430 -2.067 -5.227 1.00 4.01 ATOM 343 N CYS 33 -3.997 -1.716 -3.620 1.00 4.01 ATOM 345 CA CYS 33 -3.669 -2.852 -2.802 1.00 4.01 ATOM 346 CB CYS 33 -4.333 -2.765 -1.418 1.00 4.58 ATOM 347 SG CYS 33 -3.615 -1.417 -0.427 1.00 4.58 ATOM 348 C CYS 33 -4.008 -4.163 -3.442 1.00 4.01 ATOM 349 O CYS 33 -3.256 -5.125 -3.296 1.00 4.01 ATOM 350 N SER 34 -5.140 -4.224 -4.178 1.00 5.22 ATOM 352 CA SER 34 -5.582 -5.424 -4.845 1.00 5.22 ATOM 353 CB SER 34 -7.023 -5.270 -5.379 1.00 5.82 ATOM 354 OG SER 34 -7.105 -4.205 -6.319 1.00 5.82 ATOM 356 C SER 34 -4.666 -5.794 -5.981 1.00 5.22 ATOM 357 O SER 34 -4.267 -6.952 -6.119 1.00 5.22 ATOM 358 N ASP 35 -4.299 -4.782 -6.793 1.00 5.22 ATOM 360 CA ASP 35 -3.443 -4.907 -7.942 1.00 5.22 ATOM 361 CB ASP 35 -3.616 -3.735 -8.931 1.00 5.82 ATOM 362 CG ASP 35 -5.027 -3.742 -9.519 1.00 5.82 ATOM 363 OD1 ASP 35 -5.474 -4.801 -10.033 1.00 5.82 ATOM 364 OD2 ASP 35 -5.689 -2.673 -9.446 1.00 5.82 ATOM 365 C ASP 35 -1.988 -4.965 -7.581 1.00 5.22 ATOM 366 O ASP 35 -1.193 -5.510 -8.347 1.00 5.22 ATOM 367 N THR 36 -1.620 -4.424 -6.390 1.00 5.22 ATOM 369 CA THR 36 -0.283 -4.295 -5.835 1.00 5.22 ATOM 370 CB THR 36 0.426 -5.578 -5.400 1.00 5.82 ATOM 371 CG2 THR 36 -0.328 -6.224 -4.229 1.00 5.82 ATOM 372 OG1 THR 36 0.592 -6.506 -6.463 1.00 5.82 ATOM 374 C THR 36 0.572 -3.439 -6.740 1.00 5.22 ATOM 375 O THR 36 1.761 -3.692 -6.956 1.00 5.22 ATOM 376 N LYS 37 -0.067 -2.377 -7.288 1.00 5.22 ATOM 378 CA LYS 37 0.564 -1.443 -8.172 1.00 5.22 ATOM 379 CB LYS 37 -0.218 -1.216 -9.494 1.00 5.82 ATOM 380 CG LYS 37 0.473 -0.276 -10.495 1.00 5.82 ATOM 381 CD LYS 37 -0.343 0.069 -11.742 1.00 5.82 ATOM 382 CE LYS 37 0.375 1.078 -12.648 1.00 5.82 ATOM 383 NZ LYS 37 -0.459 1.423 -13.816 1.00 5.82 ATOM 387 C LYS 37 0.682 -0.118 -7.477 1.00 5.22 ATOM 388 O LYS 37 -0.290 0.396 -6.918 1.00 5.22 ATOM 389 N TYR 38 1.915 0.437 -7.484 1.00 4.01 ATOM 391 CA TYR 38 2.203 1.729 -6.920 1.00 4.01 ATOM 392 CB TYR 38 3.591 1.792 -6.240 1.00 4.58 ATOM 393 CG TYR 38 3.579 0.934 -5.011 1.00 4.58 ATOM 394 CD1 TYR 38 3.862 -0.436 -5.094 1.00 4.58 ATOM 395 CE1 TYR 38 3.857 -1.241 -3.952 1.00 4.58 ATOM 396 CZ TYR 38 3.578 -0.679 -2.705 1.00 4.58 ATOM 397 OH TYR 38 3.576 -1.499 -1.555 1.00 4.58 ATOM 399 CE2 TYR 38 3.312 0.690 -2.608 1.00 4.58 ATOM 400 CD2 TYR 38 3.316 1.491 -3.755 1.00 4.58 ATOM 401 C TYR 38 2.184 2.594 -8.150 1.00 4.01 ATOM 402 O TYR 38 3.042 2.460 -9.028 1.00 4.01 ATOM 403 N THR 39 1.173 3.481 -8.245 1.00 4.01 ATOM 405 CA THR 39 0.997 4.341 -9.386 1.00 4.01 ATOM 406 CB THR 39 -0.462 4.356 -9.812 1.00 4.58 ATOM 407 CG2 THR 39 -0.663 5.230 -11.071 1.00 4.58 ATOM 408 OG1 THR 39 -0.876 3.034 -10.127 1.00 4.58 ATOM 410 C THR 39 1.420 5.742 -9.033 1.00 4.01 ATOM 411 O THR 39 0.984 6.285 -8.020 1.00 4.01 ATOM 412 N LEU 40 2.310 6.343 -9.854 1.00 4.01 ATOM 414 CA LEU 40 2.731 7.700 -9.636 1.00 4.01 ATOM 415 CB LEU 40 4.186 8.016 -10.038 1.00 4.58 ATOM 416 CG LEU 40 5.284 7.230 -9.289 1.00 4.58 ATOM 417 CD1 LEU 40 6.668 7.565 -9.865 1.00 4.58 ATOM 418 CD2 LEU 40 5.221 7.439 -7.768 1.00 4.58 ATOM 419 C LEU 40 1.817 8.545 -10.475 1.00 4.01 ATOM 420 O LEU 40 1.680 8.325 -11.683 1.00 4.01 ATOM 421 N CYS 41 1.155 9.518 -9.820 1.00 4.01 ATOM 423 CA CYS 41 0.240 10.416 -10.461 1.00 4.01 ATOM 424 CB CYS 41 -1.143 10.475 -9.774 1.00 4.58 ATOM 425 SG CYS 41 -1.787 8.842 -9.294 1.00 4.58 ATOM 426 C CYS 41 0.889 11.799 -10.384 1.00 4.01 ATOM 427 O CYS 41 1.299 12.297 -11.462 1.00 4.01 ATOM 428 OXT CYS 41 1.009 12.377 -9.269 1.00 4.58 TER END