####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS471_4 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS471_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 2.20 2.20 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 36 1 - 36 1.94 2.26 LCS_AVERAGE: 83.11 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 1 - 20 0.97 2.73 LONGEST_CONTINUOUS_SEGMENT: 20 2 - 21 0.99 2.76 LONGEST_CONTINUOUS_SEGMENT: 20 5 - 24 0.92 2.44 LCS_AVERAGE: 35.22 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 20 36 41 3 7 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 20 36 41 6 16 22 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 20 36 41 6 13 21 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 20 36 41 6 13 20 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 20 36 41 9 17 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 20 36 41 9 19 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 20 36 41 9 19 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 20 36 41 9 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 20 36 41 9 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 20 36 41 9 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 20 36 41 12 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 20 36 41 12 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 20 36 41 11 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 20 36 41 12 20 26 29 31 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 20 36 41 12 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 20 36 41 3 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 20 36 41 12 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 20 36 41 12 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 20 36 41 9 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 20 36 41 12 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 20 36 41 8 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 20 36 41 12 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 20 36 41 11 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 20 36 41 3 7 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 4 36 41 3 4 7 14 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 4 36 41 3 5 7 10 10 14 29 31 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 4 36 41 3 5 15 26 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 8 36 41 5 20 26 28 31 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 8 36 41 12 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 8 36 41 12 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 8 36 41 12 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 8 36 41 12 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 8 36 41 11 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 8 36 41 5 11 22 28 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 8 36 41 3 10 17 24 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 6 36 41 3 5 6 8 23 36 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 6 34 41 4 5 6 22 29 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 6 34 41 3 5 18 24 31 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 6 13 41 4 5 6 6 29 36 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 6 13 41 4 5 13 24 29 36 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 6 7 41 4 5 6 10 31 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 72.77 ( 35.22 83.11 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 20 26 29 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 29.27 48.78 63.41 70.73 78.05 90.24 97.56 97.56 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.36 0.61 0.88 1.19 1.56 1.80 2.02 2.02 2.02 2.20 2.20 2.20 2.20 2.20 2.20 2.20 2.20 2.20 2.20 2.20 GDT RMS_ALL_AT 2.68 2.56 2.45 2.47 2.30 2.23 2.22 2.22 2.22 2.20 2.20 2.20 2.20 2.20 2.20 2.20 2.20 2.20 2.20 2.20 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: E 19 E 19 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 1.869 0 0.265 0.386 2.880 41.818 44.848 1.802 LGA Q 2 Q 2 2.907 0 0.203 1.079 4.657 30.000 18.990 4.339 LGA E 3 E 3 3.446 0 0.050 1.326 8.646 20.455 9.697 6.848 LGA T 4 T 4 2.910 0 0.077 1.018 4.605 30.455 21.039 4.605 LGA R 5 R 5 1.508 0 0.059 1.530 4.863 59.091 46.446 4.863 LGA K 6 K 6 1.130 0 0.047 1.234 7.607 73.636 40.404 7.607 LGA K 7 K 7 1.293 0 0.042 0.660 3.896 65.455 41.212 3.896 LGA C 8 C 8 1.149 0 0.045 0.765 3.879 73.636 61.818 3.879 LGA T 9 T 9 0.441 0 0.051 1.075 2.402 86.364 74.545 2.076 LGA E 10 E 10 0.490 0 0.040 0.606 2.818 86.364 61.616 2.650 LGA M 11 M 11 1.107 0 0.077 0.265 1.890 69.545 63.864 1.228 LGA K 12 K 12 1.084 0 0.067 0.753 2.787 65.909 63.838 2.480 LGA K 13 K 13 1.064 0 0.045 0.818 2.854 65.455 62.424 0.962 LGA K 14 K 14 1.590 0 0.111 0.956 6.405 61.818 39.394 6.405 LGA F 15 F 15 0.923 0 0.205 0.321 2.184 77.727 67.769 1.911 LGA K 16 K 16 1.225 0 0.143 1.032 3.934 65.455 44.848 3.934 LGA N 17 N 17 0.871 0 0.048 1.364 4.704 70.000 47.955 4.641 LGA C 18 C 18 0.703 0 0.024 0.079 0.807 81.818 81.818 0.807 LGA E 19 E 19 0.541 0 0.152 0.526 2.179 86.364 79.192 0.749 LGA V 20 V 20 1.242 0 0.060 0.073 1.942 61.818 59.221 1.942 LGA R 21 R 21 1.675 0 0.054 1.004 4.451 58.182 46.116 1.549 LGA C 22 C 22 1.588 0 0.107 0.868 3.962 66.364 54.545 3.962 LGA D 23 D 23 1.475 0 0.064 0.691 3.234 61.818 49.091 1.847 LGA E 24 E 24 1.937 0 0.044 0.623 3.421 45.000 38.384 3.421 LGA S 25 S 25 3.337 0 0.596 0.559 6.052 17.727 13.636 4.194 LGA N 26 N 26 6.198 0 0.197 1.187 11.271 1.818 0.909 8.611 LGA H 27 H 27 2.392 0 0.259 0.235 7.545 42.273 18.909 6.998 LGA C 28 C 28 1.865 0 0.197 0.224 4.209 65.909 47.879 4.209 LGA V 29 V 29 1.303 0 0.070 0.085 1.862 58.182 61.299 1.489 LGA E 30 E 30 0.908 0 0.054 0.767 2.704 73.636 60.000 1.664 LGA V 31 V 31 0.843 0 0.031 0.097 0.881 81.818 81.818 0.802 LGA R 32 R 32 0.627 0 0.207 1.016 3.420 74.091 60.661 3.420 LGA C 33 C 33 1.335 0 0.486 0.543 2.850 55.909 54.242 1.719 LGA S 34 S 34 1.824 0 0.206 0.760 3.258 43.182 39.697 2.769 LGA D 35 D 35 2.668 0 0.112 0.931 3.769 35.909 28.636 3.769 LGA T 36 T 36 3.648 0 0.376 0.932 8.630 17.273 9.870 6.322 LGA K 37 K 37 3.157 0 0.149 1.744 11.390 28.182 12.525 11.390 LGA Y 38 Y 38 2.663 0 0.067 1.311 11.940 20.909 7.121 11.940 LGA T 39 T 39 3.675 0 0.152 0.140 7.068 17.727 10.130 7.068 LGA L 40 L 40 3.412 0 0.174 1.007 9.275 14.091 7.045 8.337 LGA C 41 C 41 3.030 0 0.575 1.315 6.547 30.455 20.000 6.547 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 2.203 2.178 3.515 53.259 42.767 25.809 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 40 2.02 79.268 84.523 1.889 LGA_LOCAL RMSD: 2.018 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.216 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 2.203 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.614525 * X + 0.758734 * Y + -0.216061 * Z + -5.154908 Y_new = 0.444203 * X + 0.106454 * Y + -0.889579 * Z + -4.370482 Z_new = -0.651953 * X + -0.642644 * Y + -0.402451 * Z + 1.810384 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.515702 0.710157 -2.130289 [DEG: 144.1391 40.6890 -122.0565 ] ZXZ: -0.238267 1.984989 -2.349004 [DEG: -13.6517 113.7315 -134.5880 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS471_4 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS471_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 40 2.02 84.523 2.20 REMARK ---------------------------------------------------------- MOLECULE T0955TS471_4 PFRMAT TS TARGET T0955 MODEL 4 PARENT 5KVN_A 5JG9_A ATOM 1 N SER 1 -0.758 -14.298 -0.277 1.00 0.29 N ATOM 2 CA SER 1 -1.035 -14.791 1.092 1.00 0.29 C ATOM 3 CB SER 1 -0.038 -15.896 1.475 1.00 0.29 C ATOM 4 OG SER 1 -0.192 -17.016 0.619 1.00 0.29 O ATOM 5 C SER 1 -0.921 -13.692 2.097 1.00 0.29 C ATOM 6 O SER 1 -1.126 -12.520 1.783 1.00 0.29 O ATOM 7 N GLN 2 -0.602 -14.062 3.349 1.00 0.37 N ATOM 8 CA GLN 2 -0.463 -13.114 4.413 1.00 0.37 C ATOM 9 CB GLN 2 -0.264 -13.754 5.800 1.00 0.37 C ATOM 10 CG GLN 2 1.013 -14.581 5.929 1.00 0.37 C ATOM 11 CD GLN 2 0.763 -15.928 5.270 1.00 0.37 C ATOM 12 OE1 GLN 2 -0.348 -16.221 4.830 1.00 0.37 O ATOM 13 NE2 GLN 2 1.825 -16.774 5.208 1.00 0.37 N ATOM 14 C GLN 2 0.721 -12.257 4.120 1.00 0.37 C ATOM 15 O GLN 2 0.757 -11.086 4.488 1.00 0.37 O ATOM 16 N GLU 3 1.730 -12.833 3.444 1.00 0.32 N ATOM 17 CA GLU 3 2.941 -12.122 3.174 1.00 0.32 C ATOM 18 CB GLU 3 3.973 -12.980 2.431 1.00 0.32 C ATOM 19 CG GLU 3 5.317 -12.280 2.247 1.00 0.32 C ATOM 20 CD GLU 3 6.337 -13.359 1.933 1.00 0.32 C ATOM 21 OE1 GLU 3 6.543 -14.245 2.806 1.00 0.32 O ATOM 22 OE2 GLU 3 6.920 -13.317 0.819 1.00 0.32 O ATOM 23 C GLU 3 2.642 -10.913 2.345 1.00 0.32 C ATOM 24 O GLU 3 3.253 -9.864 2.543 1.00 0.32 O ATOM 25 N THR 4 1.701 -11.019 1.388 1.00 0.27 N ATOM 26 CA THR 4 1.357 -9.894 0.562 1.00 0.27 C ATOM 27 CB THR 4 0.393 -10.231 -0.537 1.00 0.27 C ATOM 28 OG1 THR 4 -0.843 -10.675 0.004 1.00 0.27 O ATOM 29 CG2 THR 4 1.020 -11.325 -1.414 1.00 0.27 C ATOM 30 C THR 4 0.721 -8.857 1.426 1.00 0.27 C ATOM 31 O THR 4 0.838 -7.658 1.167 1.00 0.27 O ATOM 32 N ARG 5 -0.007 -9.301 2.465 1.00 0.26 N ATOM 33 CA ARG 5 -0.630 -8.376 3.361 1.00 0.26 C ATOM 34 CB ARG 5 -1.483 -9.065 4.436 1.00 0.26 C ATOM 35 CG ARG 5 -2.621 -9.875 3.818 1.00 0.26 C ATOM 36 CD ARG 5 -3.949 -9.744 4.556 1.00 0.26 C ATOM 37 NE ARG 5 -4.480 -8.382 4.265 1.00 0.26 N ATOM 38 CZ ARG 5 -5.205 -8.162 3.131 1.00 0.26 C ATOM 39 NH1 ARG 5 -5.416 -9.181 2.250 1.00 0.26 N ATOM 40 NH2 ARG 5 -5.725 -6.924 2.879 1.00 0.26 N ATOM 41 C ARG 5 0.474 -7.630 4.030 1.00 0.26 C ATOM 42 O ARG 5 0.360 -6.438 4.314 1.00 0.26 O ATOM 43 N LYS 6 1.589 -8.333 4.291 1.00 0.20 N ATOM 44 CA LYS 6 2.725 -7.724 4.913 1.00 0.20 C ATOM 45 CB LYS 6 3.892 -8.705 5.111 1.00 0.20 C ATOM 46 CG LYS 6 3.590 -9.836 6.096 1.00 0.20 C ATOM 47 CD LYS 6 4.601 -10.985 6.030 1.00 0.20 C ATOM 48 CE LYS 6 4.318 -12.127 7.009 1.00 0.20 C ATOM 49 NZ LYS 6 4.769 -11.759 8.368 1.00 0.20 N ATOM 50 C LYS 6 3.208 -6.632 4.010 1.00 0.20 C ATOM 51 O LYS 6 3.588 -5.557 4.469 1.00 0.20 O ATOM 52 N LYS 7 3.196 -6.873 2.688 1.00 0.21 N ATOM 53 CA LYS 7 3.672 -5.885 1.764 1.00 0.21 C ATOM 54 CB LYS 7 3.619 -6.348 0.299 1.00 0.21 C ATOM 55 CG LYS 7 4.677 -7.398 -0.044 1.00 0.21 C ATOM 56 CD LYS 7 4.450 -8.081 -1.389 1.00 0.21 C ATOM 57 CE LYS 7 5.515 -9.129 -1.717 1.00 0.21 C ATOM 58 NZ LYS 7 5.206 -9.785 -3.005 1.00 0.21 N ATOM 59 C LYS 7 2.827 -4.656 1.879 1.00 0.21 C ATOM 60 O LYS 7 3.331 -3.536 1.801 1.00 0.21 O ATOM 61 N CYS 8 1.508 -4.824 2.066 1.00 0.11 N ATOM 62 CA CYS 8 0.670 -3.666 2.153 1.00 0.11 C ATOM 63 CB CYS 8 -0.841 -4.004 2.167 1.00 0.11 C ATOM 64 SG CYS 8 -1.375 -4.631 0.538 1.00 0.11 S ATOM 65 C CYS 8 1.060 -2.874 3.368 1.00 0.11 C ATOM 66 O CYS 8 1.107 -1.646 3.314 1.00 0.11 O ATOM 67 N THR 9 1.376 -3.543 4.496 1.00 0.12 N ATOM 68 CA THR 9 1.758 -2.797 5.660 1.00 0.12 C ATOM 69 CB THR 9 1.945 -3.619 6.912 1.00 0.12 C ATOM 70 OG1 THR 9 3.001 -4.555 6.767 1.00 0.12 O ATOM 71 CG2 THR 9 0.627 -4.344 7.221 1.00 0.12 C ATOM 72 C THR 9 3.044 -2.092 5.365 1.00 0.12 C ATOM 73 O THR 9 3.251 -0.958 5.791 1.00 0.12 O ATOM 74 N GLU 10 3.949 -2.755 4.619 1.00 0.16 N ATOM 75 CA GLU 10 5.222 -2.171 4.312 1.00 0.16 C ATOM 76 CB GLU 10 6.140 -3.108 3.510 1.00 0.16 C ATOM 77 CG GLU 10 6.596 -4.336 4.300 1.00 0.16 C ATOM 78 CD GLU 10 7.492 -5.170 3.397 1.00 0.16 C ATOM 79 OE1 GLU 10 7.958 -4.627 2.361 1.00 0.16 O ATOM 80 OE2 GLU 10 7.728 -6.360 3.733 1.00 0.16 O ATOM 81 C GLU 10 5.012 -0.937 3.490 1.00 0.16 C ATOM 82 O GLU 10 5.673 0.077 3.706 1.00 0.16 O ATOM 83 N MET 11 4.068 -0.988 2.532 1.00 0.15 N ATOM 84 CA MET 11 3.825 0.121 1.654 1.00 0.15 C ATOM 85 CB MET 11 2.715 -0.175 0.629 1.00 0.15 C ATOM 86 CG MET 11 3.074 -1.254 -0.397 1.00 0.15 C ATOM 87 SD MET 11 4.247 -0.722 -1.680 1.00 0.15 S ATOM 88 CE MET 11 5.677 -0.652 -0.570 1.00 0.15 C ATOM 89 C MET 11 3.370 1.286 2.473 1.00 0.15 C ATOM 90 O MET 11 3.771 2.425 2.233 1.00 0.15 O ATOM 91 N LYS 12 2.512 1.032 3.475 1.00 0.13 N ATOM 92 CA LYS 12 2.040 2.117 4.276 1.00 0.13 C ATOM 93 CB LYS 12 1.008 1.692 5.333 1.00 0.13 C ATOM 94 CG LYS 12 -0.341 1.314 4.723 1.00 0.13 C ATOM 95 CD LYS 12 -1.278 0.599 5.694 1.00 0.13 C ATOM 96 CE LYS 12 -0.879 -0.853 5.956 1.00 0.13 C ATOM 97 NZ LYS 12 -1.809 -1.460 6.934 1.00 0.13 N ATOM 98 C LYS 12 3.217 2.718 4.973 1.00 0.13 C ATOM 99 O LYS 12 3.318 3.937 5.098 1.00 0.13 O ATOM 100 N LYS 13 4.147 1.860 5.434 1.00 0.16 N ATOM 101 CA LYS 13 5.313 2.320 6.130 1.00 0.16 C ATOM 102 CB LYS 13 6.249 1.164 6.532 1.00 0.16 C ATOM 103 CG LYS 13 5.619 0.113 7.450 1.00 0.16 C ATOM 104 CD LYS 13 5.191 0.649 8.817 1.00 0.16 C ATOM 105 CE LYS 13 4.561 -0.417 9.718 1.00 0.16 C ATOM 106 NZ LYS 13 5.596 -1.377 10.161 1.00 0.16 N ATOM 107 C LYS 13 6.105 3.173 5.193 1.00 0.16 C ATOM 108 O LYS 13 6.560 4.257 5.557 1.00 0.16 O ATOM 109 N LYS 14 6.273 2.701 3.943 1.00 0.17 N ATOM 110 CA LYS 14 7.075 3.405 2.989 1.00 0.17 C ATOM 111 CB LYS 14 7.104 2.683 1.630 1.00 0.17 C ATOM 112 CG LYS 14 7.949 3.368 0.558 1.00 0.17 C ATOM 113 CD LYS 14 8.169 2.485 -0.672 1.00 0.17 C ATOM 114 CE LYS 14 8.943 3.173 -1.797 1.00 0.17 C ATOM 115 NZ LYS 14 9.096 2.249 -2.943 1.00 0.17 N ATOM 116 C LYS 14 6.477 4.755 2.773 1.00 0.17 C ATOM 117 O LYS 14 7.167 5.769 2.871 1.00 0.17 O ATOM 118 N PHE 15 5.161 4.799 2.492 1.00 0.19 N ATOM 119 CA PHE 15 4.503 6.056 2.287 1.00 0.19 C ATOM 120 CB PHE 15 3.578 6.049 1.059 1.00 0.19 C ATOM 121 CG PHE 15 4.384 5.646 -0.127 1.00 0.19 C ATOM 122 CD1 PHE 15 4.551 4.314 -0.423 1.00 0.19 C ATOM 123 CD2 PHE 15 4.972 6.588 -0.941 1.00 0.19 C ATOM 124 CE1 PHE 15 5.290 3.922 -1.514 1.00 0.19 C ATOM 125 CE2 PHE 15 5.713 6.203 -2.033 1.00 0.19 C ATOM 126 CZ PHE 15 5.875 4.869 -2.320 1.00 0.19 C ATOM 127 C PHE 15 3.610 6.228 3.471 1.00 0.19 C ATOM 128 O PHE 15 2.437 5.857 3.432 1.00 0.19 O ATOM 129 N LYS 16 4.142 6.831 4.548 1.00 0.25 N ATOM 130 CA LYS 16 3.410 6.959 5.774 1.00 0.25 C ATOM 131 CB LYS 16 4.276 7.555 6.895 1.00 0.25 C ATOM 132 CG LYS 16 5.433 6.636 7.287 1.00 0.25 C ATOM 133 CD LYS 16 6.549 7.329 8.073 1.00 0.25 C ATOM 134 CE LYS 16 6.235 7.539 9.555 1.00 0.25 C ATOM 135 NZ LYS 16 7.405 8.132 10.241 1.00 0.25 N ATOM 136 C LYS 16 2.212 7.831 5.595 1.00 0.25 C ATOM 137 O LYS 16 1.119 7.501 6.053 1.00 0.25 O ATOM 138 N ASN 17 2.393 8.987 4.938 1.00 0.24 N ATOM 139 CA ASN 17 1.321 9.921 4.764 1.00 0.24 C ATOM 140 CB ASN 17 1.796 11.326 4.346 1.00 0.24 C ATOM 141 CG ASN 17 2.448 11.268 2.970 1.00 0.24 C ATOM 142 OD1 ASN 17 3.428 10.556 2.763 1.00 0.24 O ATOM 143 ND2 ASN 17 1.889 12.039 2.004 1.00 0.24 N ATOM 144 C ASN 17 0.334 9.445 3.742 1.00 0.24 C ATOM 145 O ASN 17 -0.863 9.699 3.865 1.00 0.24 O ATOM 146 N CYS 18 0.813 8.731 2.705 1.00 0.16 N ATOM 147 CA CYS 18 -0.006 8.398 1.572 1.00 0.16 C ATOM 148 CB CYS 18 0.800 7.864 0.379 1.00 0.16 C ATOM 149 SG CYS 18 1.937 9.122 -0.274 1.00 0.16 S ATOM 150 C CYS 18 -1.068 7.402 1.902 1.00 0.16 C ATOM 151 O CYS 18 -0.968 6.632 2.856 1.00 0.16 O ATOM 152 N GLU 19 -2.142 7.417 1.086 1.00 0.18 N ATOM 153 CA GLU 19 -3.248 6.532 1.287 1.00 0.18 C ATOM 154 CB GLU 19 -4.579 7.153 0.835 1.00 0.18 C ATOM 155 CG GLU 19 -5.817 6.353 1.240 1.00 0.18 C ATOM 156 CD GLU 19 -7.031 7.157 0.802 1.00 0.18 C ATOM 157 OE1 GLU 19 -6.824 8.230 0.174 1.00 0.18 O ATOM 158 OE2 GLU 19 -8.176 6.714 1.085 1.00 0.18 O ATOM 159 C GLU 19 -2.995 5.312 0.464 1.00 0.18 C ATOM 160 O GLU 19 -3.019 5.355 -0.766 1.00 0.18 O ATOM 161 N VAL 20 -2.750 4.173 1.137 1.00 0.17 N ATOM 162 CA VAL 20 -2.462 2.965 0.428 1.00 0.17 C ATOM 163 CB VAL 20 -1.378 2.154 1.084 1.00 0.17 C ATOM 164 CG1 VAL 20 -1.194 0.840 0.309 1.00 0.17 C ATOM 165 CG2 VAL 20 -0.107 3.016 1.162 1.00 0.17 C ATOM 166 C VAL 20 -3.704 2.135 0.431 1.00 0.17 C ATOM 167 O VAL 20 -4.218 1.773 1.488 1.00 0.17 O ATOM 168 N ARG 21 -4.216 1.808 -0.772 1.00 0.17 N ATOM 169 CA ARG 21 -5.392 0.995 -0.857 1.00 0.17 C ATOM 170 CB ARG 21 -6.363 1.362 -1.996 1.00 0.17 C ATOM 171 CG ARG 21 -7.212 2.607 -1.739 1.00 0.17 C ATOM 172 CD ARG 21 -8.206 2.913 -2.867 1.00 0.17 C ATOM 173 NE ARG 21 -9.339 1.948 -2.763 1.00 0.17 N ATOM 174 CZ ARG 21 -10.437 2.083 -3.566 1.00 0.17 C ATOM 175 NH1 ARG 21 -10.489 3.097 -4.480 1.00 0.17 N ATOM 176 NH2 ARG 21 -11.483 1.211 -3.458 1.00 0.17 N ATOM 177 C ARG 21 -4.937 -0.388 -1.149 1.00 0.17 C ATOM 178 O ARG 21 -4.263 -0.636 -2.149 1.00 0.17 O ATOM 179 N CYS 22 -5.306 -1.330 -0.266 1.00 0.21 N ATOM 180 CA CYS 22 -4.889 -2.684 -0.447 1.00 0.21 C ATOM 181 CB CYS 22 -4.058 -3.178 0.761 1.00 0.21 C ATOM 182 SG CYS 22 -3.399 -4.864 0.630 1.00 0.21 S ATOM 183 C CYS 22 -6.128 -3.514 -0.562 1.00 0.21 C ATOM 184 O CYS 22 -6.979 -3.518 0.327 1.00 0.21 O ATOM 185 N ASP 23 -6.280 -4.219 -1.698 1.00 0.33 N ATOM 186 CA ASP 23 -7.398 -5.096 -1.851 1.00 0.33 C ATOM 187 CB ASP 23 -7.774 -5.401 -3.312 1.00 0.33 C ATOM 188 CG ASP 23 -8.503 -4.205 -3.908 1.00 0.33 C ATOM 189 OD1 ASP 23 -8.954 -3.327 -3.123 1.00 0.33 O ATOM 190 OD2 ASP 23 -8.628 -4.157 -5.160 1.00 0.33 O ATOM 191 C ASP 23 -6.986 -6.381 -1.220 1.00 0.33 C ATOM 192 O ASP 23 -5.875 -6.521 -0.715 1.00 0.33 O ATOM 193 N GLU 24 -7.899 -7.359 -1.215 1.00 0.38 N ATOM 194 CA GLU 24 -7.613 -8.642 -0.656 1.00 0.38 C ATOM 195 CB GLU 24 -8.869 -9.529 -0.597 1.00 0.38 C ATOM 196 CG GLU 24 -9.595 -9.658 -1.934 1.00 0.38 C ATOM 197 CD GLU 24 -10.966 -10.234 -1.642 1.00 0.38 C ATOM 198 OE1 GLU 24 -11.216 -10.573 -0.455 1.00 0.38 O ATOM 199 OE2 GLU 24 -11.785 -10.338 -2.593 1.00 0.38 O ATOM 200 C GLU 24 -6.554 -9.305 -1.484 1.00 0.38 C ATOM 201 O GLU 24 -5.761 -10.095 -0.976 1.00 0.38 O ATOM 202 N SER 25 -6.522 -9.003 -2.796 1.00 0.41 N ATOM 203 CA SER 25 -5.567 -9.619 -3.674 1.00 0.41 C ATOM 204 CB SER 25 -5.731 -9.235 -5.152 1.00 0.41 C ATOM 205 OG SER 25 -6.923 -9.795 -5.673 1.00 0.41 O ATOM 206 C SER 25 -4.186 -9.221 -3.277 1.00 0.41 C ATOM 207 O SER 25 -3.962 -8.193 -2.639 1.00 0.41 O ATOM 208 N ASN 26 -3.219 -10.075 -3.657 1.00 0.42 N ATOM 209 CA ASN 26 -1.853 -9.881 -3.282 1.00 0.42 C ATOM 210 CB ASN 26 -0.945 -11.007 -3.805 1.00 0.42 C ATOM 211 CG ASN 26 -1.388 -12.332 -3.203 1.00 0.42 C ATOM 212 OD1 ASN 26 -1.917 -12.381 -2.094 1.00 0.42 O ATOM 213 ND2 ASN 26 -1.166 -13.443 -3.955 1.00 0.42 N ATOM 214 C ASN 26 -1.304 -8.622 -3.877 1.00 0.42 C ATOM 215 O ASN 26 -0.818 -7.741 -3.172 1.00 0.42 O ATOM 216 N HIS 27 -1.367 -8.529 -5.213 1.00 0.41 N ATOM 217 CA HIS 27 -0.788 -7.465 -5.981 1.00 0.41 C ATOM 218 ND1 HIS 27 1.991 -8.544 -7.137 1.00 0.41 N ATOM 219 CG HIS 27 0.681 -8.883 -7.396 1.00 0.41 C ATOM 220 CB HIS 27 -0.444 -7.892 -7.415 1.00 0.41 C ATOM 221 NE2 HIS 27 1.951 -10.745 -7.441 1.00 0.41 N ATOM 222 CD2 HIS 27 0.675 -10.230 -7.580 1.00 0.41 C ATOM 223 CE1 HIS 27 2.707 -9.696 -7.175 1.00 0.41 C ATOM 224 C HIS 27 -1.582 -6.202 -6.001 1.00 0.41 C ATOM 225 O HIS 27 -1.032 -5.149 -6.318 1.00 0.41 O ATOM 226 N CYS 28 -2.898 -6.248 -5.725 1.00 0.23 N ATOM 227 CA CYS 28 -3.670 -5.052 -5.922 1.00 0.23 C ATOM 228 CB CYS 28 -5.187 -5.310 -5.946 1.00 0.23 C ATOM 229 SG CYS 28 -5.699 -6.281 -7.395 1.00 0.23 S ATOM 230 C CYS 28 -3.401 -4.019 -4.868 1.00 0.23 C ATOM 231 O CYS 28 -4.122 -3.926 -3.876 1.00 0.23 O ATOM 232 N VAL 29 -2.366 -3.180 -5.074 1.00 0.19 N ATOM 233 CA VAL 29 -2.113 -2.131 -4.129 1.00 0.19 C ATOM 234 CB VAL 29 -0.854 -2.337 -3.340 1.00 0.19 C ATOM 235 CG1 VAL 29 -0.635 -1.114 -2.437 1.00 0.19 C ATOM 236 CG2 VAL 29 -0.971 -3.667 -2.577 1.00 0.19 C ATOM 237 C VAL 29 -1.959 -0.851 -4.887 1.00 0.19 C ATOM 238 O VAL 29 -1.156 -0.752 -5.813 1.00 0.19 O ATOM 239 N GLU 30 -2.737 0.181 -4.511 1.00 0.18 N ATOM 240 CA GLU 30 -2.583 1.434 -5.181 1.00 0.18 C ATOM 241 CB GLU 30 -3.799 1.845 -6.031 1.00 0.18 C ATOM 242 CG GLU 30 -5.115 1.934 -5.267 1.00 0.18 C ATOM 243 CD GLU 30 -6.206 2.235 -6.285 1.00 0.18 C ATOM 244 OE1 GLU 30 -6.418 3.436 -6.598 1.00 0.18 O ATOM 245 OE2 GLU 30 -6.838 1.259 -6.772 1.00 0.18 O ATOM 246 C GLU 30 -2.331 2.466 -4.132 1.00 0.18 C ATOM 247 O GLU 30 -3.038 2.540 -3.129 1.00 0.18 O ATOM 248 N VAL 31 -1.288 3.290 -4.340 1.00 0.18 N ATOM 249 CA VAL 31 -0.964 4.268 -3.348 1.00 0.18 C ATOM 250 CB VAL 31 0.488 4.251 -2.966 1.00 0.18 C ATOM 251 CG1 VAL 31 0.749 5.395 -1.973 1.00 0.18 C ATOM 252 CG2 VAL 31 0.841 2.858 -2.420 1.00 0.18 C ATOM 253 C VAL 31 -1.267 5.621 -3.907 1.00 0.18 C ATOM 254 O VAL 31 -0.842 5.959 -5.011 1.00 0.18 O ATOM 255 N ARG 32 -2.023 6.440 -3.148 1.00 0.23 N ATOM 256 CA ARG 32 -2.324 7.759 -3.623 1.00 0.23 C ATOM 257 CB ARG 32 -3.797 8.187 -3.494 1.00 0.23 C ATOM 258 CG ARG 32 -4.724 7.446 -4.455 1.00 0.23 C ATOM 259 CD ARG 32 -6.039 8.170 -4.754 1.00 0.23 C ATOM 260 NE ARG 32 -6.871 8.181 -3.523 1.00 0.23 N ATOM 261 CZ ARG 32 -8.200 8.471 -3.620 1.00 0.23 C ATOM 262 NH1 ARG 32 -8.749 8.722 -4.844 1.00 0.23 N ATOM 263 NH2 ARG 32 -8.979 8.508 -2.501 1.00 0.23 N ATOM 264 C ARG 32 -1.523 8.729 -2.826 1.00 0.23 C ATOM 265 O ARG 32 -1.492 8.681 -1.597 1.00 0.23 O ATOM 266 N CYS 33 -0.843 9.651 -3.531 1.00 0.20 N ATOM 267 CA CYS 33 -0.026 10.614 -2.861 1.00 0.20 C ATOM 268 CB CYS 33 1.360 10.794 -3.505 1.00 0.20 C ATOM 269 SG CYS 33 2.360 9.277 -3.438 1.00 0.20 S ATOM 270 C CYS 33 -0.724 11.936 -2.921 1.00 0.20 C ATOM 271 O CYS 33 -1.670 12.125 -3.684 1.00 0.20 O ATOM 272 N SER 34 -0.272 12.881 -2.072 1.00 0.34 N ATOM 273 CA SER 34 -0.831 14.202 -1.999 1.00 0.34 C ATOM 274 CB SER 34 -0.233 15.038 -0.855 1.00 0.34 C ATOM 275 OG SER 34 1.140 15.295 -1.108 1.00 0.34 O ATOM 276 C SER 34 -0.514 14.913 -3.281 1.00 0.34 C ATOM 277 O SER 34 -1.219 15.834 -3.693 1.00 0.34 O ATOM 278 N ASP 35 0.577 14.479 -3.931 1.00 0.43 N ATOM 279 CA ASP 35 1.092 14.993 -5.167 1.00 0.43 C ATOM 280 CB ASP 35 2.472 14.416 -5.524 1.00 0.43 C ATOM 281 CG ASP 35 3.483 14.971 -4.530 1.00 0.43 C ATOM 282 OD1 ASP 35 3.113 15.901 -3.765 1.00 0.43 O ATOM 283 OD2 ASP 35 4.639 14.472 -4.526 1.00 0.43 O ATOM 284 C ASP 35 0.145 14.622 -6.263 1.00 0.43 C ATOM 285 O ASP 35 0.294 15.095 -7.387 1.00 0.43 O ATOM 286 N THR 36 -0.831 13.743 -5.956 1.00 0.44 N ATOM 287 CA THR 36 -1.751 13.148 -6.888 1.00 0.44 C ATOM 288 CB THR 36 -2.688 14.068 -7.647 1.00 0.44 C ATOM 289 OG1 THR 36 -2.004 14.962 -8.509 1.00 0.44 O ATOM 290 CG2 THR 36 -3.542 14.837 -6.626 1.00 0.44 C ATOM 291 C THR 36 -0.969 12.301 -7.826 1.00 0.44 C ATOM 292 O THR 36 -1.206 12.282 -9.034 1.00 0.44 O ATOM 293 N LYS 37 0.008 11.574 -7.247 1.00 0.43 N ATOM 294 CA LYS 37 0.818 10.626 -7.952 1.00 0.43 C ATOM 295 CB LYS 37 2.306 10.672 -7.564 1.00 0.43 C ATOM 296 CG LYS 37 2.991 12.016 -7.820 1.00 0.43 C ATOM 297 CD LYS 37 3.069 12.428 -9.290 1.00 0.43 C ATOM 298 CE LYS 37 3.765 13.776 -9.488 1.00 0.43 C ATOM 299 NZ LYS 37 3.812 14.122 -10.925 1.00 0.43 N ATOM 300 C LYS 37 0.326 9.282 -7.516 1.00 0.43 C ATOM 301 O LYS 37 -0.149 9.123 -6.393 1.00 0.43 O ATOM 302 N TYR 38 0.410 8.275 -8.409 1.00 0.36 N ATOM 303 CA TYR 38 -0.058 6.970 -8.046 1.00 0.36 C ATOM 304 CB TYR 38 -1.246 6.485 -8.895 1.00 0.36 C ATOM 305 CG TYR 38 -2.405 7.368 -8.592 1.00 0.36 C ATOM 306 CD1 TYR 38 -2.561 8.575 -9.234 1.00 0.36 C ATOM 307 CD2 TYR 38 -3.340 6.986 -7.660 1.00 0.36 C ATOM 308 CE1 TYR 38 -3.636 9.386 -8.948 1.00 0.36 C ATOM 309 CE2 TYR 38 -4.415 7.792 -7.370 1.00 0.36 C ATOM 310 CZ TYR 38 -4.565 8.995 -8.013 1.00 0.36 C ATOM 311 OH TYR 38 -5.669 9.822 -7.715 1.00 0.36 O ATOM 312 C TYR 38 1.052 5.991 -8.252 1.00 0.36 C ATOM 313 O TYR 38 1.752 6.018 -9.264 1.00 0.36 O ATOM 314 N THR 39 1.232 5.095 -7.262 1.00 0.31 N ATOM 315 CA THR 39 2.220 4.061 -7.323 1.00 0.31 C ATOM 316 CB THR 39 3.167 4.082 -6.160 1.00 0.31 C ATOM 317 OG1 THR 39 3.849 5.326 -6.104 1.00 0.31 O ATOM 318 CG2 THR 39 4.171 2.928 -6.307 1.00 0.31 C ATOM 319 C THR 39 1.474 2.771 -7.237 1.00 0.31 C ATOM 320 O THR 39 0.583 2.617 -6.402 1.00 0.31 O ATOM 321 N LEU 40 1.809 1.809 -8.121 1.00 0.36 N ATOM 322 CA LEU 40 1.142 0.540 -8.074 1.00 0.36 C ATOM 323 CB LEU 40 0.486 0.137 -9.408 1.00 0.36 C ATOM 324 CG LEU 40 -0.681 1.055 -9.819 1.00 0.36 C ATOM 325 CD1 LEU 40 -1.302 0.612 -11.152 1.00 0.36 C ATOM 326 CD2 LEU 40 -1.724 1.176 -8.696 1.00 0.36 C ATOM 327 C LEU 40 2.171 -0.484 -7.733 1.00 0.36 C ATOM 328 O LEU 40 3.321 -0.389 -8.158 1.00 0.36 O ATOM 329 N CYS 41 1.783 -1.484 -6.920 1.00 0.39 N ATOM 330 CA CYS 41 2.725 -2.492 -6.540 1.00 0.39 C ATOM 331 CB CYS 41 2.952 -2.551 -5.020 1.00 0.39 C ATOM 332 SG CYS 41 4.208 -3.772 -4.539 1.00 0.39 S ATOM 333 C CYS 41 2.171 -3.841 -6.981 1.00 0.39 C ATOM 334 O CYS 41 2.011 -4.735 -6.108 1.00 0.39 O ATOM 335 OXT CYS 41 1.903 -3.997 -8.202 1.00 0.39 O TER END