####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS471_3 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS471_3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 2.26 2.26 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 1 - 35 1.87 2.38 LCS_AVERAGE: 78.11 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 5 - 24 0.98 2.53 LCS_AVERAGE: 34.50 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 19 35 41 3 8 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 19 35 41 10 14 22 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 19 35 41 6 10 20 29 30 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 19 35 41 6 12 20 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 20 35 41 10 15 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 20 35 41 10 17 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 20 35 41 10 17 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 20 35 41 10 18 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 20 35 41 10 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 20 35 41 10 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 20 35 41 10 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 20 35 41 10 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 20 35 41 10 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 20 35 41 10 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 20 35 41 10 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 20 35 41 3 18 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 20 35 41 4 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 20 35 41 8 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 20 35 41 8 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 20 35 41 8 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 20 35 41 6 16 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 20 35 41 5 16 23 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 20 35 41 10 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 20 35 41 8 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 4 35 41 3 5 7 12 30 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 4 35 41 3 5 7 9 10 14 22 31 39 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 4 35 41 3 4 13 25 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 7 35 41 8 19 25 28 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 7 35 41 10 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 7 35 41 10 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 7 35 41 10 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 7 35 41 10 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 7 35 41 10 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 7 35 41 5 12 19 28 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 7 35 41 3 11 18 23 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 6 33 41 3 5 6 9 20 34 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 6 12 41 3 5 6 21 27 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 6 12 41 3 5 18 24 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 6 12 41 3 5 6 6 22 32 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 6 12 41 3 5 6 21 27 34 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 6 7 41 3 5 6 23 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 70.87 ( 34.50 78.11 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 19 25 29 31 37 39 40 40 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 24.39 46.34 60.98 70.73 75.61 90.24 95.12 97.56 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.23 0.64 0.87 1.22 1.40 1.84 2.01 2.07 2.07 2.26 2.26 2.26 2.26 2.26 2.26 2.26 2.26 2.26 2.26 2.26 GDT RMS_ALL_AT 3.60 2.60 2.52 2.53 2.37 2.28 2.29 2.27 2.27 2.26 2.26 2.26 2.26 2.26 2.26 2.26 2.26 2.26 2.26 2.26 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: E 19 E 19 # possible swapping detected: E 24 E 24 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 1.608 0 0.132 0.684 3.747 36.818 34.848 3.747 LGA Q 2 Q 2 2.924 0 0.206 1.019 5.352 30.000 18.182 5.352 LGA E 3 E 3 3.582 0 0.054 1.405 9.410 16.364 7.879 9.410 LGA T 4 T 4 3.005 0 0.081 0.292 3.446 28.182 26.753 3.446 LGA R 5 R 5 1.678 0 0.072 0.934 2.715 59.091 56.033 1.444 LGA K 6 K 6 1.330 0 0.047 1.325 8.978 69.545 38.586 8.978 LGA K 7 K 7 1.369 0 0.039 0.660 4.177 65.455 38.384 4.177 LGA C 8 C 8 1.153 0 0.042 0.755 3.619 73.636 61.818 3.619 LGA T 9 T 9 0.344 0 0.049 0.114 0.770 90.909 89.610 0.582 LGA E 10 E 10 0.470 0 0.041 0.609 2.583 90.909 67.273 2.583 LGA M 11 M 11 1.077 0 0.071 0.598 3.413 69.545 59.773 3.413 LGA K 12 K 12 1.112 0 0.082 0.681 2.900 65.909 62.626 2.803 LGA K 13 K 13 1.068 0 0.044 0.799 1.894 65.909 66.061 1.494 LGA K 14 K 14 1.583 0 0.124 1.045 6.411 61.818 41.010 6.411 LGA F 15 F 15 1.128 0 0.229 0.334 2.133 65.455 63.306 1.867 LGA K 16 K 16 1.554 0 0.162 1.082 5.318 58.182 41.010 5.318 LGA N 17 N 17 0.914 0 0.035 1.312 4.859 70.000 50.227 4.859 LGA C 18 C 18 0.730 0 0.024 0.062 0.850 81.818 81.818 0.850 LGA E 19 E 19 0.534 0 0.135 0.484 1.465 86.364 86.061 0.561 LGA V 20 V 20 1.248 0 0.064 0.085 2.042 61.818 55.325 2.042 LGA R 21 R 21 1.653 0 0.048 0.993 3.686 54.545 43.967 2.203 LGA C 22 C 22 1.832 0 0.070 0.306 3.775 62.273 49.697 3.775 LGA D 23 D 23 1.541 0 0.057 0.689 3.377 58.182 45.682 2.107 LGA E 24 E 24 1.841 0 0.053 1.224 3.004 42.727 54.141 1.942 LGA S 25 S 25 3.560 0 0.581 0.545 6.228 15.909 11.818 4.537 LGA N 26 N 26 6.337 0 0.190 1.130 11.438 0.455 0.227 8.530 LGA H 27 H 27 2.474 0 0.274 0.294 7.154 42.273 18.909 6.665 LGA C 28 C 28 1.869 0 0.202 0.237 4.504 70.455 50.303 4.504 LGA V 29 V 29 1.279 0 0.063 0.084 1.918 58.182 57.143 1.608 LGA E 30 E 30 0.908 0 0.059 0.849 3.836 77.727 58.182 3.836 LGA V 31 V 31 0.879 0 0.030 0.094 0.921 81.818 81.818 0.873 LGA R 32 R 32 0.640 0 0.212 0.762 1.724 70.000 71.570 1.427 LGA C 33 C 33 1.444 0 0.488 0.549 2.824 55.909 54.242 1.982 LGA S 34 S 34 2.001 0 0.214 0.749 3.497 37.273 33.939 2.978 LGA D 35 D 35 2.766 0 0.107 0.905 3.727 32.727 25.682 3.727 LGA T 36 T 36 3.754 0 0.379 0.895 8.714 17.273 9.870 6.469 LGA K 37 K 37 3.134 0 0.179 1.490 12.845 25.455 11.515 12.845 LGA Y 38 Y 38 2.644 0 0.050 1.311 12.122 20.909 7.424 12.122 LGA T 39 T 39 3.735 0 0.148 0.137 7.127 15.455 8.831 7.127 LGA L 40 L 40 3.670 0 0.184 0.310 10.637 12.273 6.136 7.050 LGA C 41 C 41 2.691 0 0.512 1.298 5.312 21.818 19.481 5.312 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 2.257 2.265 3.584 51.741 43.102 25.011 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 40 2.07 78.659 82.599 1.844 LGA_LOCAL RMSD: 2.069 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.270 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 2.257 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.615850 * X + 0.758832 * Y + -0.211901 * Z + -5.113963 Y_new = 0.441117 * X + 0.109255 * Y + -0.890774 * Z + -4.407912 Z_new = -0.652797 * X + -0.642057 * Y + -0.402018 * Z + 1.813348 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.520028 0.711271 -2.130216 [DEG: 144.3870 40.7528 -122.0524 ] ZXZ: -0.233544 1.984517 -2.347901 [DEG: -13.3811 113.7044 -134.5248 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS471_3 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS471_3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 40 2.07 82.599 2.26 REMARK ---------------------------------------------------------- MOLECULE T0955TS471_3 PFRMAT TS TARGET T0955 MODEL 3 PARENT 5KVN_A 5JG9_A ATOM 1 N SER 1 -1.629 -14.252 -0.303 1.00 0.30 N ATOM 2 CA SER 1 -0.906 -14.811 0.860 1.00 0.30 C ATOM 3 CB SER 1 0.518 -15.231 0.447 1.00 0.30 C ATOM 4 OG SER 1 1.224 -15.772 1.555 1.00 0.30 O ATOM 5 C SER 1 -0.827 -13.800 1.952 1.00 0.30 C ATOM 6 O SER 1 -1.069 -12.615 1.745 1.00 0.30 O ATOM 7 N GLN 2 -0.501 -14.257 3.170 1.00 0.36 N ATOM 8 CA GLN 2 -0.402 -13.391 4.307 1.00 0.36 C ATOM 9 CB GLN 2 -0.220 -14.166 5.619 1.00 0.36 C ATOM 10 CG GLN 2 1.073 -14.979 5.670 1.00 0.36 C ATOM 11 CD GLN 2 0.987 -15.884 6.887 1.00 0.36 C ATOM 12 OE1 GLN 2 1.374 -15.511 7.994 1.00 0.36 O ATOM 13 NE2 GLN 2 0.447 -17.115 6.681 1.00 0.36 N ATOM 14 C GLN 2 0.753 -12.461 4.130 1.00 0.36 C ATOM 15 O GLN 2 0.715 -11.320 4.588 1.00 0.36 O ATOM 16 N GLU 3 1.819 -12.931 3.457 1.00 0.34 N ATOM 17 CA GLU 3 3.010 -12.151 3.301 1.00 0.34 C ATOM 18 CB GLU 3 4.110 -12.892 2.520 1.00 0.34 C ATOM 19 CG GLU 3 4.607 -14.167 3.211 1.00 0.34 C ATOM 20 CD GLU 3 5.102 -13.820 4.613 1.00 0.34 C ATOM 21 OE1 GLU 3 4.283 -13.318 5.428 1.00 0.34 O ATOM 22 OE2 GLU 3 6.307 -14.057 4.892 1.00 0.34 O ATOM 23 C GLU 3 2.677 -10.896 2.566 1.00 0.34 C ATOM 24 O GLU 3 3.220 -9.837 2.871 1.00 0.34 O ATOM 25 N THR 4 1.768 -10.978 1.574 1.00 0.30 N ATOM 26 CA THR 4 1.407 -9.832 0.785 1.00 0.30 C ATOM 27 CB THR 4 0.498 -10.146 -0.366 1.00 0.30 C ATOM 28 OG1 THR 4 0.482 -9.051 -1.267 1.00 0.30 O ATOM 29 CG2 THR 4 -0.921 -10.391 0.159 1.00 0.30 C ATOM 30 C THR 4 0.719 -8.838 1.666 1.00 0.30 C ATOM 31 O THR 4 0.793 -7.631 1.432 1.00 0.30 O ATOM 32 N ARG 5 0.003 -9.330 2.692 1.00 0.34 N ATOM 33 CA ARG 5 -0.682 -8.461 3.607 1.00 0.34 C ATOM 34 CB ARG 5 -1.328 -9.226 4.775 1.00 0.34 C ATOM 35 CG ARG 5 -2.122 -10.460 4.350 1.00 0.34 C ATOM 36 CD ARG 5 -3.474 -10.161 3.706 1.00 0.34 C ATOM 37 NE ARG 5 -4.054 -11.478 3.331 1.00 0.34 N ATOM 38 CZ ARG 5 -5.397 -11.585 3.128 1.00 0.34 C ATOM 39 NH1 ARG 5 -6.171 -10.478 3.315 1.00 0.34 N ATOM 40 NH2 ARG 5 -5.949 -12.771 2.738 1.00 0.34 N ATOM 41 C ARG 5 0.388 -7.634 4.238 1.00 0.34 C ATOM 42 O ARG 5 0.232 -6.433 4.459 1.00 0.34 O ATOM 43 N LYS 6 1.527 -8.290 4.526 1.00 0.23 N ATOM 44 CA LYS 6 2.644 -7.653 5.155 1.00 0.23 C ATOM 45 CB LYS 6 3.874 -8.573 5.267 1.00 0.23 C ATOM 46 CG LYS 6 3.711 -9.838 6.110 1.00 0.23 C ATOM 47 CD LYS 6 3.579 -9.598 7.613 1.00 0.23 C ATOM 48 CE LYS 6 3.541 -10.893 8.428 1.00 0.23 C ATOM 49 NZ LYS 6 3.560 -10.591 9.877 1.00 0.23 N ATOM 50 C LYS 6 3.084 -6.544 4.257 1.00 0.23 C ATOM 51 O LYS 6 3.410 -5.452 4.719 1.00 0.23 O ATOM 52 N LYS 7 3.089 -6.803 2.935 1.00 0.22 N ATOM 53 CA LYS 7 3.557 -5.845 1.969 1.00 0.22 C ATOM 54 CB LYS 7 3.481 -6.360 0.519 1.00 0.22 C ATOM 55 CG LYS 7 4.550 -7.414 0.210 1.00 0.22 C ATOM 56 CD LYS 7 4.316 -8.192 -1.088 1.00 0.22 C ATOM 57 CE LYS 7 5.414 -9.218 -1.386 1.00 0.22 C ATOM 58 NZ LYS 7 5.124 -9.936 -2.648 1.00 0.22 N ATOM 59 C LYS 7 2.715 -4.620 2.064 1.00 0.22 C ATOM 60 O LYS 7 3.208 -3.503 1.911 1.00 0.22 O ATOM 61 N CYS 8 1.409 -4.796 2.315 1.00 0.16 N ATOM 62 CA CYS 8 0.548 -3.658 2.417 1.00 0.16 C ATOM 63 CB CYS 8 -0.909 -4.048 2.675 1.00 0.16 C ATOM 64 SG CYS 8 -1.635 -4.763 1.182 1.00 0.16 S ATOM 65 C CYS 8 1.008 -2.827 3.565 1.00 0.16 C ATOM 66 O CYS 8 1.054 -1.601 3.477 1.00 0.16 O ATOM 67 N THR 9 1.368 -3.481 4.683 1.00 0.13 N ATOM 68 CA THR 9 1.802 -2.733 5.820 1.00 0.13 C ATOM 69 CB THR 9 2.093 -3.577 7.017 1.00 0.13 C ATOM 70 OG1 THR 9 0.949 -4.350 7.349 1.00 0.13 O ATOM 71 CG2 THR 9 2.435 -2.631 8.183 1.00 0.13 C ATOM 72 C THR 9 3.076 -2.037 5.457 1.00 0.13 C ATOM 73 O THR 9 3.287 -0.885 5.832 1.00 0.13 O ATOM 74 N GLU 10 3.958 -2.721 4.700 1.00 0.18 N ATOM 75 CA GLU 10 5.222 -2.145 4.335 1.00 0.18 C ATOM 76 CB GLU 10 6.076 -3.040 3.413 1.00 0.18 C ATOM 77 CG GLU 10 6.674 -4.288 4.060 1.00 0.18 C ATOM 78 CD GLU 10 7.494 -5.016 2.997 1.00 0.18 C ATOM 79 OE1 GLU 10 7.316 -4.709 1.786 1.00 0.18 O ATOM 80 OE2 GLU 10 8.316 -5.887 3.386 1.00 0.18 O ATOM 81 C GLU 10 4.985 -0.902 3.541 1.00 0.18 C ATOM 82 O GLU 10 5.635 0.118 3.765 1.00 0.18 O ATOM 83 N MET 11 4.041 -0.960 2.587 1.00 0.17 N ATOM 84 CA MET 11 3.782 0.147 1.713 1.00 0.17 C ATOM 85 CB MET 11 2.730 -0.174 0.637 1.00 0.17 C ATOM 86 CG MET 11 3.223 -1.173 -0.413 1.00 0.17 C ATOM 87 SD MET 11 4.575 -0.545 -1.452 1.00 0.17 S ATOM 88 CE MET 11 4.882 -2.138 -2.261 1.00 0.17 C ATOM 89 C MET 11 3.293 1.307 2.512 1.00 0.17 C ATOM 90 O MET 11 3.667 2.452 2.258 1.00 0.17 O ATOM 91 N LYS 12 2.436 1.048 3.515 1.00 0.13 N ATOM 92 CA LYS 12 1.938 2.149 4.273 1.00 0.13 C ATOM 93 CB LYS 12 0.871 1.752 5.308 1.00 0.13 C ATOM 94 CG LYS 12 -0.465 1.402 4.646 1.00 0.13 C ATOM 95 CD LYS 12 -1.500 0.801 5.597 1.00 0.13 C ATOM 96 CE LYS 12 -2.877 0.635 4.952 1.00 0.13 C ATOM 97 NZ LYS 12 -3.815 0.010 5.908 1.00 0.13 N ATOM 98 C LYS 12 3.088 2.806 4.963 1.00 0.13 C ATOM 99 O LYS 12 3.185 4.033 4.977 1.00 0.13 O ATOM 100 N LYS 13 4.003 2.010 5.547 1.00 0.16 N ATOM 101 CA LYS 13 5.124 2.600 6.215 1.00 0.16 C ATOM 102 CB LYS 13 5.908 1.616 7.106 1.00 0.16 C ATOM 103 CG LYS 13 6.382 0.328 6.437 1.00 0.16 C ATOM 104 CD LYS 13 7.335 -0.465 7.333 1.00 0.16 C ATOM 105 CE LYS 13 6.900 -0.499 8.801 1.00 0.16 C ATOM 106 NZ LYS 13 5.671 -1.311 8.949 1.00 0.16 N ATOM 107 C LYS 13 6.022 3.285 5.225 1.00 0.16 C ATOM 108 O LYS 13 6.541 4.363 5.508 1.00 0.16 O ATOM 109 N LYS 14 6.219 2.700 4.025 1.00 0.19 N ATOM 110 CA LYS 14 7.102 3.320 3.075 1.00 0.19 C ATOM 111 CB LYS 14 7.162 2.568 1.732 1.00 0.19 C ATOM 112 CG LYS 14 8.106 3.229 0.726 1.00 0.19 C ATOM 113 CD LYS 14 8.359 2.406 -0.539 1.00 0.19 C ATOM 114 CE LYS 14 9.158 3.176 -1.592 1.00 0.19 C ATOM 115 NZ LYS 14 9.151 2.446 -2.877 1.00 0.19 N ATOM 116 C LYS 14 6.579 4.686 2.771 1.00 0.19 C ATOM 117 O LYS 14 7.295 5.676 2.904 1.00 0.19 O ATOM 118 N PHE 15 5.296 4.771 2.370 1.00 0.22 N ATOM 119 CA PHE 15 4.715 6.054 2.107 1.00 0.22 C ATOM 120 CB PHE 15 3.837 6.081 0.844 1.00 0.22 C ATOM 121 CG PHE 15 4.674 5.704 -0.333 1.00 0.22 C ATOM 122 CD1 PHE 15 4.847 4.374 -0.641 1.00 0.22 C ATOM 123 CD2 PHE 15 5.276 6.653 -1.130 1.00 0.22 C ATOM 124 CE1 PHE 15 5.611 3.994 -1.717 1.00 0.22 C ATOM 125 CE2 PHE 15 6.045 6.276 -2.210 1.00 0.22 C ATOM 126 CZ PHE 15 6.209 4.943 -2.507 1.00 0.22 C ATOM 127 C PHE 15 3.822 6.273 3.279 1.00 0.22 C ATOM 128 O PHE 15 2.647 5.906 3.267 1.00 0.22 O ATOM 129 N LYS 16 4.373 6.917 4.320 1.00 0.27 N ATOM 130 CA LYS 16 3.701 7.032 5.576 1.00 0.27 C ATOM 131 CB LYS 16 4.582 7.738 6.614 1.00 0.27 C ATOM 132 CG LYS 16 4.256 7.334 8.045 1.00 0.27 C ATOM 133 CD LYS 16 4.712 5.909 8.358 1.00 0.27 C ATOM 134 CE LYS 16 4.488 5.495 9.808 1.00 0.27 C ATOM 135 NZ LYS 16 4.930 4.097 10.004 1.00 0.27 N ATOM 136 C LYS 16 2.438 7.816 5.449 1.00 0.27 C ATOM 137 O LYS 16 1.385 7.388 5.916 1.00 0.27 O ATOM 138 N ASN 17 2.518 9.002 4.824 1.00 0.26 N ATOM 139 CA ASN 17 1.390 9.879 4.715 1.00 0.26 C ATOM 140 CB ASN 17 1.772 11.348 4.444 1.00 0.26 C ATOM 141 CG ASN 17 2.503 11.480 3.119 1.00 0.26 C ATOM 142 OD1 ASN 17 2.869 10.488 2.489 1.00 0.26 O ATOM 143 ND2 ASN 17 2.734 12.749 2.685 1.00 0.26 N ATOM 144 C ASN 17 0.401 9.417 3.689 1.00 0.26 C ATOM 145 O ASN 17 -0.790 9.693 3.811 1.00 0.26 O ATOM 146 N CYS 18 0.863 8.696 2.650 1.00 0.17 N ATOM 147 CA CYS 18 0.023 8.381 1.525 1.00 0.17 C ATOM 148 CB CYS 18 0.807 7.823 0.327 1.00 0.17 C ATOM 149 SG CYS 18 2.035 9.010 -0.302 1.00 0.17 S ATOM 150 C CYS 18 -1.060 7.407 1.860 1.00 0.17 C ATOM 151 O CYS 18 -0.980 6.650 2.824 1.00 0.17 O ATOM 152 N GLU 19 -2.130 7.431 1.034 1.00 0.18 N ATOM 153 CA GLU 19 -3.245 6.553 1.230 1.00 0.18 C ATOM 154 CB GLU 19 -4.567 7.147 0.717 1.00 0.18 C ATOM 155 CG GLU 19 -5.763 6.217 0.916 1.00 0.18 C ATOM 156 CD GLU 19 -6.968 6.841 0.226 1.00 0.18 C ATOM 157 OE1 GLU 19 -6.775 7.845 -0.511 1.00 0.18 O ATOM 158 OE2 GLU 19 -8.096 6.317 0.420 1.00 0.18 O ATOM 159 C GLU 19 -2.996 5.312 0.433 1.00 0.18 C ATOM 160 O GLU 19 -3.061 5.324 -0.795 1.00 0.18 O ATOM 161 N VAL 20 -2.720 4.187 1.118 1.00 0.17 N ATOM 162 CA VAL 20 -2.448 2.978 0.400 1.00 0.17 C ATOM 163 CB VAL 20 -1.328 2.161 0.981 1.00 0.17 C ATOM 164 CG1 VAL 20 -1.236 0.831 0.209 1.00 0.17 C ATOM 165 CG2 VAL 20 -0.037 2.993 0.931 1.00 0.17 C ATOM 166 C VAL 20 -3.682 2.140 0.435 1.00 0.17 C ATOM 167 O VAL 20 -4.197 1.800 1.499 1.00 0.17 O ATOM 168 N ARG 21 -4.191 1.780 -0.759 1.00 0.16 N ATOM 169 CA ARG 21 -5.384 0.992 -0.836 1.00 0.16 C ATOM 170 CB ARG 21 -6.360 1.521 -1.904 1.00 0.16 C ATOM 171 CG ARG 21 -7.458 0.531 -2.293 1.00 0.16 C ATOM 172 CD ARG 21 -8.397 1.044 -3.395 1.00 0.16 C ATOM 173 NE ARG 21 -9.630 1.586 -2.762 1.00 0.16 N ATOM 174 CZ ARG 21 -10.728 1.855 -3.532 1.00 0.16 C ATOM 175 NH1 ARG 21 -10.652 1.817 -4.897 1.00 0.16 N ATOM 176 NH2 ARG 21 -11.921 2.148 -2.935 1.00 0.16 N ATOM 177 C ARG 21 -4.985 -0.392 -1.217 1.00 0.16 C ATOM 178 O ARG 21 -4.362 -0.610 -2.254 1.00 0.16 O ATOM 179 N CYS 22 -5.333 -1.374 -0.362 1.00 0.24 N ATOM 180 CA CYS 22 -4.996 -2.729 -0.668 1.00 0.24 C ATOM 181 CB CYS 22 -4.150 -3.442 0.391 1.00 0.24 C ATOM 182 SG CYS 22 -2.376 -3.134 0.240 1.00 0.24 S ATOM 183 C CYS 22 -6.238 -3.539 -0.778 1.00 0.24 C ATOM 184 O CYS 22 -7.134 -3.478 0.064 1.00 0.24 O ATOM 185 N ASP 23 -6.314 -4.331 -1.860 1.00 0.32 N ATOM 186 CA ASP 23 -7.409 -5.235 -2.010 1.00 0.32 C ATOM 187 CB ASP 23 -7.778 -5.559 -3.475 1.00 0.32 C ATOM 188 CG ASP 23 -8.580 -4.393 -4.050 1.00 0.32 C ATOM 189 OD1 ASP 23 -9.024 -3.541 -3.236 1.00 0.32 O ATOM 190 OD2 ASP 23 -8.780 -4.346 -5.294 1.00 0.32 O ATOM 191 C ASP 23 -6.999 -6.504 -1.337 1.00 0.32 C ATOM 192 O ASP 23 -5.936 -6.601 -0.729 1.00 0.32 O ATOM 193 N GLU 24 -7.880 -7.509 -1.429 1.00 0.38 N ATOM 194 CA GLU 24 -7.683 -8.795 -0.842 1.00 0.38 C ATOM 195 CB GLU 24 -8.907 -9.699 -1.064 1.00 0.38 C ATOM 196 CG GLU 24 -8.992 -10.899 -0.123 1.00 0.38 C ATOM 197 CD GLU 24 -9.418 -10.356 1.233 1.00 0.38 C ATOM 198 OE1 GLU 24 -10.603 -9.952 1.374 1.00 0.38 O ATOM 199 OE2 GLU 24 -8.553 -10.325 2.145 1.00 0.38 O ATOM 200 C GLU 24 -6.526 -9.444 -1.527 1.00 0.38 C ATOM 201 O GLU 24 -5.786 -10.222 -0.926 1.00 0.38 O ATOM 202 N SER 25 -6.359 -9.138 -2.826 1.00 0.39 N ATOM 203 CA SER 25 -5.350 -9.747 -3.642 1.00 0.39 C ATOM 204 CB SER 25 -5.480 -9.409 -5.135 1.00 0.39 C ATOM 205 OG SER 25 -6.630 -10.037 -5.673 1.00 0.39 O ATOM 206 C SER 25 -3.990 -9.326 -3.207 1.00 0.39 C ATOM 207 O SER 25 -3.805 -8.362 -2.464 1.00 0.39 O ATOM 208 N ASN 26 -2.991 -10.108 -3.660 1.00 0.37 N ATOM 209 CA ASN 26 -1.622 -9.887 -3.302 1.00 0.37 C ATOM 210 CB ASN 26 -0.691 -10.967 -3.883 1.00 0.37 C ATOM 211 CG ASN 26 -1.151 -12.345 -3.427 1.00 0.37 C ATOM 212 OD1 ASN 26 -1.926 -12.483 -2.481 1.00 0.37 O ATOM 213 ND2 ASN 26 -0.664 -13.400 -4.132 1.00 0.37 N ATOM 214 C ASN 26 -1.128 -8.597 -3.883 1.00 0.37 C ATOM 215 O ASN 26 -0.629 -7.722 -3.179 1.00 0.37 O ATOM 216 N HIS 27 -1.255 -8.482 -5.213 1.00 0.36 N ATOM 217 CA HIS 27 -0.726 -7.407 -6.003 1.00 0.36 C ATOM 218 ND1 HIS 27 1.733 -8.864 -7.152 1.00 0.36 N ATOM 219 CG HIS 27 0.418 -8.950 -7.553 1.00 0.36 C ATOM 220 CB HIS 27 -0.543 -7.811 -7.470 1.00 0.36 C ATOM 221 NE2 HIS 27 1.409 -10.949 -7.851 1.00 0.36 N ATOM 222 CD2 HIS 27 0.237 -10.228 -7.979 1.00 0.36 C ATOM 223 CE1 HIS 27 2.278 -10.090 -7.352 1.00 0.36 C ATOM 224 C HIS 27 -1.527 -6.153 -5.950 1.00 0.36 C ATOM 225 O HIS 27 -0.992 -5.083 -6.225 1.00 0.36 O ATOM 226 N CYS 28 -2.831 -6.241 -5.641 1.00 0.24 N ATOM 227 CA CYS 28 -3.670 -5.084 -5.780 1.00 0.24 C ATOM 228 CB CYS 28 -5.161 -5.411 -5.609 1.00 0.24 C ATOM 229 SG CYS 28 -5.745 -6.582 -6.869 1.00 0.24 S ATOM 230 C CYS 28 -3.350 -4.029 -4.768 1.00 0.24 C ATOM 231 O CYS 28 -4.000 -3.943 -3.732 1.00 0.24 O ATOM 232 N VAL 29 -2.361 -3.160 -5.063 1.00 0.19 N ATOM 233 CA VAL 29 -2.070 -2.104 -4.137 1.00 0.19 C ATOM 234 CB VAL 29 -0.772 -2.290 -3.419 1.00 0.19 C ATOM 235 CG1 VAL 29 -0.504 -1.023 -2.595 1.00 0.19 C ATOM 236 CG2 VAL 29 -0.855 -3.574 -2.577 1.00 0.19 C ATOM 237 C VAL 29 -1.977 -0.817 -4.899 1.00 0.19 C ATOM 238 O VAL 29 -1.213 -0.699 -5.860 1.00 0.19 O ATOM 239 N GLU 30 -2.758 0.198 -4.481 1.00 0.17 N ATOM 240 CA GLU 30 -2.702 1.476 -5.132 1.00 0.17 C ATOM 241 CB GLU 30 -4.050 1.942 -5.714 1.00 0.17 C ATOM 242 CG GLU 30 -4.504 1.181 -6.962 1.00 0.17 C ATOM 243 CD GLU 30 -5.858 1.730 -7.397 1.00 0.17 C ATOM 244 OE1 GLU 30 -5.891 2.867 -7.940 1.00 0.17 O ATOM 245 OE2 GLU 30 -6.877 1.021 -7.189 1.00 0.17 O ATOM 246 C GLU 30 -2.317 2.470 -4.088 1.00 0.17 C ATOM 247 O GLU 30 -2.908 2.511 -3.013 1.00 0.17 O ATOM 248 N VAL 31 -1.306 3.307 -4.381 1.00 0.16 N ATOM 249 CA VAL 31 -0.874 4.267 -3.408 1.00 0.16 C ATOM 250 CB VAL 31 0.608 4.215 -3.166 1.00 0.16 C ATOM 251 CG1 VAL 31 1.001 5.335 -2.187 1.00 0.16 C ATOM 252 CG2 VAL 31 0.966 2.800 -2.673 1.00 0.16 C ATOM 253 C VAL 31 -1.196 5.626 -3.941 1.00 0.16 C ATOM 254 O VAL 31 -0.840 5.960 -5.072 1.00 0.16 O ATOM 255 N ARG 32 -1.894 6.456 -3.145 1.00 0.21 N ATOM 256 CA ARG 32 -2.205 7.772 -3.624 1.00 0.21 C ATOM 257 CB ARG 32 -3.659 8.212 -3.420 1.00 0.21 C ATOM 258 CG ARG 32 -4.651 7.478 -4.313 1.00 0.21 C ATOM 259 CD ARG 32 -6.065 8.046 -4.231 1.00 0.21 C ATOM 260 NE ARG 32 -6.967 7.062 -4.888 1.00 0.21 N ATOM 261 CZ ARG 32 -8.317 7.231 -4.822 1.00 0.21 C ATOM 262 NH1 ARG 32 -8.834 8.351 -4.239 1.00 0.21 N ATOM 263 NH2 ARG 32 -9.152 6.283 -5.336 1.00 0.21 N ATOM 264 C ARG 32 -1.379 8.747 -2.860 1.00 0.21 C ATOM 265 O ARG 32 -1.298 8.696 -1.633 1.00 0.21 O ATOM 266 N CYS 33 -0.746 9.679 -3.591 1.00 0.19 N ATOM 267 CA CYS 33 0.097 10.631 -2.944 1.00 0.19 C ATOM 268 CB CYS 33 1.439 10.829 -3.673 1.00 0.19 C ATOM 269 SG CYS 33 2.421 9.299 -3.712 1.00 0.19 S ATOM 270 C CYS 33 -0.612 11.949 -2.917 1.00 0.19 C ATOM 271 O CYS 33 -1.572 12.179 -3.652 1.00 0.19 O ATOM 272 N SER 34 -0.147 12.847 -2.023 1.00 0.33 N ATOM 273 CA SER 34 -0.695 14.167 -1.877 1.00 0.33 C ATOM 274 CB SER 34 -0.067 14.933 -0.699 1.00 0.33 C ATOM 275 OG SER 34 1.324 15.108 -0.933 1.00 0.33 O ATOM 276 C SER 34 -0.391 14.926 -3.131 1.00 0.33 C ATOM 277 O SER 34 -1.075 15.889 -3.477 1.00 0.33 O ATOM 278 N ASP 35 0.662 14.479 -3.831 1.00 0.43 N ATOM 279 CA ASP 35 1.133 15.017 -5.073 1.00 0.43 C ATOM 280 CB ASP 35 2.498 14.443 -5.495 1.00 0.43 C ATOM 281 CG ASP 35 3.536 14.932 -4.490 1.00 0.43 C ATOM 282 OD1 ASP 35 3.154 15.693 -3.562 1.00 0.43 O ATOM 283 OD2 ASP 35 4.727 14.546 -4.632 1.00 0.43 O ATOM 284 C ASP 35 0.127 14.675 -6.128 1.00 0.43 C ATOM 285 O ASP 35 0.204 15.180 -7.246 1.00 0.43 O ATOM 286 N THR 36 -0.825 13.786 -5.781 1.00 0.44 N ATOM 287 CA THR 36 -1.825 13.216 -6.647 1.00 0.44 C ATOM 288 CB THR 36 -2.833 14.164 -7.255 1.00 0.44 C ATOM 289 OG1 THR 36 -2.227 15.158 -8.066 1.00 0.44 O ATOM 290 CG2 THR 36 -3.633 14.808 -6.114 1.00 0.44 C ATOM 291 C THR 36 -1.155 12.386 -7.684 1.00 0.44 C ATOM 292 O THR 36 -1.511 12.410 -8.864 1.00 0.44 O ATOM 293 N LYS 37 -0.147 11.615 -7.233 1.00 0.42 N ATOM 294 CA LYS 37 0.563 10.686 -8.057 1.00 0.42 C ATOM 295 CB LYS 37 2.091 10.806 -7.954 1.00 0.42 C ATOM 296 CG LYS 37 2.655 12.115 -8.513 1.00 0.42 C ATOM 297 CD LYS 37 4.135 12.324 -8.161 1.00 0.42 C ATOM 298 CE LYS 37 4.810 13.495 -8.887 1.00 0.42 C ATOM 299 NZ LYS 37 6.264 13.500 -8.601 1.00 0.42 N ATOM 300 C LYS 37 0.190 9.319 -7.575 1.00 0.42 C ATOM 301 O LYS 37 -0.285 9.150 -6.450 1.00 0.42 O ATOM 302 N TYR 38 0.381 8.299 -8.433 1.00 0.34 N ATOM 303 CA TYR 38 -0.006 6.975 -8.051 1.00 0.34 C ATOM 304 CB TYR 38 -1.138 6.392 -8.910 1.00 0.34 C ATOM 305 CG TYR 38 -2.356 7.215 -8.697 1.00 0.34 C ATOM 306 CD1 TYR 38 -2.566 8.363 -9.429 1.00 0.34 C ATOM 307 CD2 TYR 38 -3.293 6.828 -7.770 1.00 0.34 C ATOM 308 CE1 TYR 38 -3.693 9.123 -9.230 1.00 0.34 C ATOM 309 CE2 TYR 38 -4.421 7.583 -7.565 1.00 0.34 C ATOM 310 CZ TYR 38 -4.624 8.729 -8.297 1.00 0.34 C ATOM 311 OH TYR 38 -5.786 9.499 -8.084 1.00 0.34 O ATOM 312 C TYR 38 1.146 6.046 -8.240 1.00 0.34 C ATOM 313 O TYR 38 1.905 6.138 -9.205 1.00 0.34 O ATOM 314 N THR 39 1.297 5.118 -7.281 1.00 0.32 N ATOM 315 CA THR 39 2.287 4.091 -7.376 1.00 0.32 C ATOM 316 CB THR 39 3.267 4.104 -6.242 1.00 0.32 C ATOM 317 OG1 THR 39 3.923 5.363 -6.182 1.00 0.32 O ATOM 318 CG2 THR 39 4.297 2.980 -6.461 1.00 0.32 C ATOM 319 C THR 39 1.515 2.814 -7.298 1.00 0.32 C ATOM 320 O THR 39 0.686 2.642 -6.407 1.00 0.32 O ATOM 321 N LEU 40 1.746 1.883 -8.243 1.00 0.38 N ATOM 322 CA LEU 40 0.973 0.681 -8.217 1.00 0.38 C ATOM 323 CB LEU 40 0.186 0.428 -9.517 1.00 0.38 C ATOM 324 CG LEU 40 -0.825 1.551 -9.823 1.00 0.38 C ATOM 325 CD1 LEU 40 -0.106 2.868 -10.142 1.00 0.38 C ATOM 326 CD2 LEU 40 -1.818 1.149 -10.923 1.00 0.38 C ATOM 327 C LEU 40 1.911 -0.449 -8.006 1.00 0.38 C ATOM 328 O LEU 40 3.054 -0.418 -8.458 1.00 0.38 O ATOM 329 N CYS 41 1.442 -1.475 -7.275 1.00 0.40 N ATOM 330 CA CYS 41 2.280 -2.599 -7.014 1.00 0.40 C ATOM 331 CB CYS 41 1.916 -3.339 -5.718 1.00 0.40 C ATOM 332 SG CYS 41 3.170 -4.569 -5.256 1.00 0.40 S ATOM 333 C CYS 41 2.103 -3.570 -8.185 1.00 0.40 C ATOM 334 O CYS 41 0.950 -3.757 -8.665 1.00 0.40 O ATOM 335 OXT CYS 41 3.139 -4.138 -8.618 1.00 0.40 O TER END