####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS458_4 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS458_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 19 - 41 4.89 14.14 LCS_AVERAGE: 54.02 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 1 - 16 1.34 16.80 LCS_AVERAGE: 30.34 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 2 - 15 0.76 16.89 LONGEST_CONTINUOUS_SEGMENT: 14 3 - 16 0.98 16.90 LCS_AVERAGE: 21.65 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 16 21 3 3 4 7 13 16 16 16 17 19 22 23 24 25 27 28 28 30 31 31 LCS_GDT Q 2 Q 2 14 16 21 7 11 14 14 15 16 16 16 17 19 22 23 24 25 27 28 28 30 31 31 LCS_GDT E 3 E 3 14 16 21 10 12 14 14 15 16 16 16 17 19 22 23 23 25 27 28 28 30 31 31 LCS_GDT T 4 T 4 14 16 21 10 12 14 14 15 16 16 16 17 19 22 23 24 25 27 28 28 30 31 31 LCS_GDT R 5 R 5 14 16 21 10 12 14 14 15 16 16 16 17 19 22 23 24 25 27 28 28 30 31 31 LCS_GDT K 6 K 6 14 16 21 10 12 14 14 15 16 16 16 17 19 22 23 24 25 27 28 28 30 31 31 LCS_GDT K 7 K 7 14 16 21 10 12 14 14 15 16 16 16 17 19 22 23 24 25 27 28 28 30 31 31 LCS_GDT C 8 C 8 14 16 21 10 12 14 14 15 16 16 16 17 19 22 23 24 25 27 28 28 30 31 31 LCS_GDT T 9 T 9 14 16 21 10 12 14 14 15 16 16 16 17 19 22 23 24 25 27 28 28 30 31 31 LCS_GDT E 10 E 10 14 16 21 10 12 14 14 15 16 16 16 17 18 22 23 24 25 27 28 28 30 31 31 LCS_GDT M 11 M 11 14 16 21 10 12 14 14 15 16 16 16 17 19 22 23 24 25 27 28 28 30 31 31 LCS_GDT K 12 K 12 14 16 21 10 12 14 14 15 16 16 16 17 19 22 23 24 25 27 28 28 30 31 31 LCS_GDT K 13 K 13 14 16 21 5 12 14 14 15 16 16 16 17 19 22 23 24 25 27 28 28 30 31 31 LCS_GDT K 14 K 14 14 16 21 3 12 14 14 15 16 16 16 17 18 22 23 24 25 27 28 28 30 31 31 LCS_GDT F 15 F 15 14 16 21 4 11 14 14 15 16 16 16 17 18 22 23 24 25 27 28 28 30 31 31 LCS_GDT K 16 K 16 14 16 21 3 4 12 12 15 16 16 16 17 19 22 23 24 25 27 28 28 30 31 31 LCS_GDT N 17 N 17 3 6 21 3 3 4 4 7 10 11 14 17 19 22 23 23 25 27 28 28 30 31 31 LCS_GDT C 18 C 18 7 9 22 3 5 7 8 8 9 11 12 14 16 17 22 23 24 26 26 28 30 30 31 LCS_GDT E 19 E 19 7 9 23 3 6 7 8 8 9 11 12 14 16 17 19 20 22 25 26 27 28 29 30 LCS_GDT V 20 V 20 7 9 23 5 6 7 8 8 9 11 12 14 16 17 20 20 22 25 26 27 28 29 30 LCS_GDT R 21 R 21 7 9 23 5 6 7 8 8 9 11 12 14 16 17 20 20 22 24 25 27 28 29 30 LCS_GDT C 22 C 22 7 9 23 5 6 7 8 8 9 11 15 18 18 18 20 20 22 24 25 26 28 29 30 LCS_GDT D 23 D 23 7 9 23 5 6 7 8 8 9 11 15 18 18 18 20 20 22 24 25 26 28 29 30 LCS_GDT E 24 E 24 7 9 23 5 6 7 8 8 10 12 15 18 18 18 20 20 22 24 25 26 28 29 30 LCS_GDT S 25 S 25 7 10 23 3 6 7 8 9 10 12 15 18 18 18 20 20 22 25 26 27 28 29 30 LCS_GDT N 26 N 26 3 10 23 3 3 6 8 9 10 11 15 18 18 18 20 21 22 25 26 27 28 29 30 LCS_GDT H 27 H 27 6 12 23 4 5 6 8 10 12 12 15 18 18 18 20 21 23 26 26 28 29 30 31 LCS_GDT C 28 C 28 6 12 23 4 5 6 8 10 12 12 15 18 18 22 23 23 25 26 28 28 30 31 31 LCS_GDT V 29 V 29 6 12 23 4 5 7 8 10 12 12 15 18 18 18 20 23 25 26 26 28 29 31 31 LCS_GDT E 30 E 30 6 12 23 4 5 7 8 10 12 12 15 18 19 22 23 23 25 26 28 28 30 31 31 LCS_GDT V 31 V 31 6 12 23 4 5 7 8 10 12 12 15 18 19 22 23 24 25 27 28 28 30 31 31 LCS_GDT R 32 R 32 6 12 23 3 5 7 8 10 12 12 15 18 19 22 23 24 25 27 28 28 30 31 31 LCS_GDT C 33 C 33 6 12 23 4 5 7 8 9 10 12 15 18 18 19 21 24 25 27 28 28 30 31 31 LCS_GDT S 34 S 34 6 12 23 4 5 7 8 10 12 12 15 18 18 19 21 24 25 27 28 28 30 31 31 LCS_GDT D 35 D 35 5 12 23 4 5 5 7 10 12 12 15 18 18 19 21 23 25 27 28 28 30 31 31 LCS_GDT T 36 T 36 6 12 23 5 7 8 8 10 12 12 15 18 18 19 21 23 25 27 28 28 30 31 31 LCS_GDT K 37 K 37 6 12 23 5 7 8 8 9 12 12 15 18 18 19 21 24 25 27 28 28 30 31 31 LCS_GDT Y 38 Y 38 6 12 23 5 7 8 8 10 12 12 15 18 18 20 23 24 25 27 28 28 30 31 31 LCS_GDT T 39 T 39 6 7 23 5 7 8 8 9 12 12 15 18 18 22 23 24 25 27 28 28 30 31 31 LCS_GDT L 40 L 40 6 7 23 5 7 8 8 9 10 12 14 15 19 22 23 24 25 27 28 28 30 31 31 LCS_GDT C 41 C 41 6 7 23 2 7 8 8 9 9 11 14 15 19 22 23 24 25 27 28 28 30 31 31 LCS_AVERAGE LCS_A: 35.34 ( 21.65 30.34 54.02 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 14 14 15 16 16 16 18 19 22 23 24 25 27 28 28 30 31 31 GDT PERCENT_AT 24.39 29.27 34.15 34.15 36.59 39.02 39.02 39.02 43.90 46.34 53.66 56.10 58.54 60.98 65.85 68.29 68.29 73.17 75.61 75.61 GDT RMS_LOCAL 0.29 0.51 0.76 0.76 1.05 1.34 1.34 1.34 3.30 4.12 4.35 4.42 4.67 4.68 4.97 5.13 5.13 5.65 5.88 5.88 GDT RMS_ALL_AT 17.17 17.06 16.89 16.89 16.81 16.80 16.80 16.80 14.80 10.83 10.88 10.84 11.54 11.93 11.90 11.93 11.93 11.35 11.14 11.14 # Checking swapping # possible swapping detected: F 15 F 15 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: D 35 D 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 3.080 0 0.140 0.656 6.661 15.455 10.606 6.661 LGA Q 2 Q 2 1.824 0 0.230 0.900 5.106 61.818 36.566 5.106 LGA E 3 E 3 0.764 0 0.079 1.117 5.078 77.727 46.465 4.509 LGA T 4 T 4 0.895 0 0.037 1.083 2.992 81.818 66.234 2.992 LGA R 5 R 5 0.963 0 0.038 0.965 4.885 81.818 54.876 4.885 LGA K 6 K 6 0.861 0 0.030 1.332 6.307 81.818 53.131 6.307 LGA K 7 K 7 0.777 0 0.036 0.603 1.859 81.818 71.313 1.815 LGA C 8 C 8 0.887 0 0.026 0.746 3.844 81.818 67.273 3.844 LGA T 9 T 9 0.731 0 0.033 0.078 0.912 81.818 81.818 0.912 LGA E 10 E 10 0.542 0 0.024 0.764 2.660 81.818 67.475 2.660 LGA M 11 M 11 0.568 0 0.055 1.283 6.943 81.818 56.591 6.943 LGA K 12 K 12 1.230 0 0.053 0.832 5.195 69.545 48.485 5.195 LGA K 13 K 13 1.550 0 0.050 0.296 3.260 61.818 44.444 3.260 LGA K 14 K 14 0.899 0 0.020 0.702 1.994 77.727 76.566 1.994 LGA F 15 F 15 0.878 0 0.438 1.448 7.789 53.182 25.455 7.789 LGA K 16 K 16 2.187 0 0.512 1.090 5.262 27.273 27.677 4.930 LGA N 17 N 17 8.331 0 0.134 1.087 12.099 0.000 0.000 11.537 LGA C 18 C 18 12.641 0 0.525 0.637 15.006 0.000 0.000 10.976 LGA E 19 E 19 18.438 0 0.268 0.867 25.767 0.000 0.000 23.148 LGA V 20 V 20 18.855 0 0.068 1.085 21.182 0.000 0.000 19.255 LGA R 21 R 21 23.043 0 0.076 1.391 28.160 0.000 0.000 27.857 LGA C 22 C 22 24.148 0 0.116 0.860 27.446 0.000 0.000 23.182 LGA D 23 D 23 26.698 0 0.072 0.748 28.819 0.000 0.000 28.819 LGA E 24 E 24 28.142 0 0.637 0.966 33.095 0.000 0.000 33.095 LGA S 25 S 25 29.103 0 0.596 0.921 31.495 0.000 0.000 28.854 LGA N 26 N 26 30.418 0 0.106 1.326 32.835 0.000 0.000 32.146 LGA H 27 H 27 23.461 0 0.504 1.098 25.729 0.000 0.000 19.735 LGA C 28 C 28 22.213 0 0.081 0.729 22.878 0.000 0.000 21.527 LGA V 29 V 29 20.889 0 0.146 0.303 21.036 0.000 0.000 20.725 LGA E 30 E 30 20.644 0 0.118 1.077 24.146 0.000 0.000 23.729 LGA V 31 V 31 19.244 0 0.043 0.879 20.320 0.000 0.000 20.320 LGA R 32 R 32 19.152 0 0.223 1.037 24.927 0.000 0.000 24.927 LGA C 33 C 33 18.948 0 0.502 1.124 19.342 0.000 0.000 16.079 LGA S 34 S 34 20.856 0 0.135 0.135 21.858 0.000 0.000 20.361 LGA D 35 D 35 23.476 0 0.132 0.252 24.578 0.000 0.000 24.578 LGA T 36 T 36 22.717 0 0.162 0.909 23.559 0.000 0.000 23.559 LGA K 37 K 37 21.698 0 0.085 0.898 26.849 0.000 0.000 26.849 LGA Y 38 Y 38 19.496 0 0.020 1.370 19.659 0.000 0.000 19.115 LGA T 39 T 39 17.781 0 0.140 0.972 22.084 0.000 0.000 22.084 LGA L 40 L 40 14.981 0 0.213 0.605 15.406 0.000 0.000 13.739 LGA C 41 C 41 18.081 0 0.247 0.861 23.082 0.000 0.000 23.082 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 9.694 9.537 10.993 26.807 20.365 6.652 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 16 1.34 42.683 40.073 1.112 LGA_LOCAL RMSD: 1.339 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.797 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 9.694 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.288592 * X + -0.490793 * Y + -0.822093 * Z + 6.483970 Y_new = 0.214581 * X + 0.869939 * Y + -0.444029 * Z + -3.650514 Z_new = 0.933097 * X + -0.048263 * Y + 0.356372 * Z + 6.944290 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.639358 -1.202930 -0.134610 [DEG: 36.6325 -68.9228 -7.7126 ] ZXZ: -1.075570 1.206414 1.622474 [DEG: -61.6256 69.1224 92.9609 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS458_4 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS458_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 16 1.34 40.073 9.69 REMARK ---------------------------------------------------------- MOLECULE T0955TS458_4 PFRMAT TS TARGET T0955 MODEL 4 PARENT N/A ATOM 1 CB SER 1 -2.579 -12.496 -0.873 1.00 4.15 C ATOM 2 OG SER 1 -3.485 -11.419 -0.706 1.00 4.15 O ATOM 4 C SER 1 -1.412 -12.401 1.364 1.00 4.15 C ATOM 5 O SER 1 -1.630 -11.194 1.546 1.00 4.15 O ATOM 8 N SER 1 -3.633 -13.541 1.116 1.00 4.15 N ATOM 10 CA SER 1 -2.335 -13.228 0.454 1.00 4.15 C ATOM 11 N GLN 2 -0.421 -13.072 1.971 1.00 3.87 N ATOM 13 CA GLN 2 0.571 -12.444 2.870 1.00 3.87 C ATOM 14 CB GLN 2 1.333 -13.490 3.685 1.00 3.87 C ATOM 15 CG GLN 2 0.495 -14.219 4.729 1.00 3.87 C ATOM 16 CD GLN 2 1.298 -15.243 5.511 1.00 3.87 C ATOM 17 OE1 GLN 2 1.866 -14.933 6.558 1.00 3.87 O ATOM 18 NE2 GLN 2 1.349 -16.470 5.003 1.00 3.87 N ATOM 21 C GLN 2 1.573 -11.519 2.165 1.00 3.87 C ATOM 22 O GLN 2 1.916 -10.468 2.709 1.00 3.87 O ATOM 23 N GLU 3 2.002 -11.899 0.950 1.00 3.87 N ATOM 25 CA GLU 3 2.972 -11.129 0.135 1.00 3.87 C ATOM 26 CB GLU 3 3.395 -11.923 -1.107 1.00 3.87 C ATOM 27 CG GLU 3 4.244 -13.159 -0.818 1.00 3.87 C ATOM 28 CD GLU 3 4.634 -13.910 -2.077 1.00 3.87 C ATOM 29 OE1 GLU 3 3.878 -14.813 -2.493 1.00 3.87 O ATOM 30 OE2 GLU 3 5.699 -13.599 -2.651 1.00 3.87 O ATOM 31 C GLU 3 2.443 -9.745 -0.281 1.00 3.87 C ATOM 32 O GLU 3 3.162 -8.746 -0.153 1.00 3.87 O ATOM 33 N THR 4 1.190 -9.702 -0.761 1.00 4.04 N ATOM 35 CA THR 4 0.504 -8.457 -1.171 1.00 4.04 C ATOM 36 CB THR 4 -0.812 -8.726 -1.962 1.00 4.04 C ATOM 37 OG1 THR 4 -1.701 -9.523 -1.171 1.00 4.04 O ATOM 39 CG2 THR 4 -0.522 -9.436 -3.282 1.00 4.04 C ATOM 40 C THR 4 0.210 -7.614 0.087 1.00 4.04 C ATOM 41 O THR 4 0.319 -6.382 0.053 1.00 4.04 O ATOM 42 N ARG 5 -0.109 -8.310 1.193 1.00 3.45 N ATOM 44 CA ARG 5 -0.412 -7.710 2.510 1.00 3.45 C ATOM 45 CB ARG 5 -0.940 -8.776 3.480 1.00 3.45 C ATOM 46 CG ARG 5 -2.147 -8.342 4.328 1.00 3.45 C ATOM 47 CD ARG 5 -2.622 -9.449 5.268 1.00 3.45 C ATOM 48 NE ARG 5 -3.240 -10.574 4.559 1.00 3.45 N ATOM 50 CZ ARG 5 -3.741 -11.665 5.138 1.00 3.45 C ATOM 51 NH1 ARG 5 -4.276 -12.617 4.385 1.00 3.45 N ATOM 54 NH2 ARG 5 -3.716 -11.817 6.459 1.00 3.45 N ATOM 57 C ARG 5 0.851 -7.050 3.095 1.00 3.45 C ATOM 58 O ARG 5 0.770 -5.941 3.626 1.00 3.45 O ATOM 59 N LYS 6 2.006 -7.719 2.940 1.00 3.20 N ATOM 61 CA LYS 6 3.319 -7.234 3.419 1.00 3.20 C ATOM 62 CB LYS 6 4.392 -8.324 3.293 1.00 3.20 C ATOM 63 CG LYS 6 4.324 -9.415 4.351 1.00 3.20 C ATOM 64 CD LYS 6 5.374 -10.491 4.099 1.00 3.20 C ATOM 65 CE LYS 6 5.321 -11.610 5.138 1.00 3.20 C ATOM 66 NZ LYS 6 4.091 -12.451 5.050 1.00 3.20 N ATOM 70 C LYS 6 3.740 -5.994 2.617 1.00 3.20 C ATOM 71 O LYS 6 4.264 -5.036 3.191 1.00 3.20 O ATOM 72 N LYS 7 3.446 -6.013 1.308 1.00 3.69 N ATOM 74 CA LYS 7 3.735 -4.918 0.359 1.00 3.69 C ATOM 75 CB LYS 7 3.469 -5.398 -1.079 1.00 3.69 C ATOM 76 CG LYS 7 4.399 -4.809 -2.147 1.00 3.69 C ATOM 77 CD LYS 7 4.060 -5.345 -3.528 1.00 3.69 C ATOM 78 CE LYS 7 4.982 -4.763 -4.588 1.00 3.69 C ATOM 79 NZ LYS 7 4.664 -5.280 -5.947 1.00 3.69 N ATOM 83 C LYS 7 2.832 -3.712 0.711 1.00 3.69 C ATOM 84 O LYS 7 3.272 -2.556 0.648 1.00 3.69 O ATOM 85 N CYS 8 1.590 -4.024 1.113 1.00 3.27 N ATOM 87 CA CYS 8 0.549 -3.060 1.524 1.00 3.27 C ATOM 88 CB CYS 8 -0.802 -3.778 1.653 1.00 3.27 C ATOM 89 SG CYS 8 -1.575 -4.215 0.078 1.00 3.27 S ATOM 90 C CYS 8 0.909 -2.372 2.855 1.00 3.27 C ATOM 91 O CYS 8 0.816 -1.143 2.972 1.00 3.27 O ATOM 92 N THR 9 1.361 -3.185 3.822 1.00 3.23 N ATOM 94 CA THR 9 1.776 -2.760 5.171 1.00 3.23 C ATOM 95 CB THR 9 1.929 -4.004 6.124 1.00 3.23 C ATOM 96 OG1 THR 9 0.790 -4.859 5.973 1.00 3.23 O ATOM 98 CG2 THR 9 1.979 -3.573 7.604 1.00 3.23 C ATOM 99 C THR 9 3.078 -1.920 5.079 1.00 3.23 C ATOM 100 O THR 9 3.237 -0.942 5.820 1.00 3.23 O ATOM 101 N GLU 10 3.965 -2.295 4.142 1.00 3.62 N ATOM 103 CA GLU 10 5.251 -1.611 3.885 1.00 3.62 C ATOM 104 CB GLU 10 6.150 -2.457 2.973 1.00 3.62 C ATOM 105 CG GLU 10 6.930 -3.541 3.700 1.00 3.62 C ATOM 106 CD GLU 10 7.788 -4.386 2.775 1.00 3.62 C ATOM 107 OE1 GLU 10 7.242 -5.283 2.096 1.00 3.62 O ATOM 108 OE2 GLU 10 9.016 -4.163 2.740 1.00 3.62 O ATOM 109 C GLU 10 5.087 -0.198 3.298 1.00 3.62 C ATOM 110 O GLU 10 5.736 0.737 3.775 1.00 3.62 O ATOM 111 N MET 11 4.208 -0.049 2.293 1.00 3.40 N ATOM 113 CA MET 11 3.929 1.251 1.643 1.00 3.40 C ATOM 114 CG MET 11 1.862 0.313 0.289 1.00 3.40 C ATOM 115 SD MET 11 1.117 0.189 -1.351 1.00 3.40 S ATOM 116 CE MET 11 -0.145 1.468 -1.259 1.00 3.40 C ATOM 117 C MET 11 3.196 2.238 2.577 1.00 3.40 C ATOM 118 O MET 11 3.489 3.440 2.564 1.00 3.40 O ATOM 119 CB MET 11 3.196 1.082 0.292 1.00 3.40 C ATOM 120 N LYS 12 2.275 1.703 3.396 1.00 2.75 N ATOM 122 CA LYS 12 1.488 2.474 4.380 1.00 2.75 C ATOM 123 CB LYS 12 0.338 1.632 4.950 1.00 2.75 C ATOM 124 CG LYS 12 -0.827 1.422 3.990 1.00 2.75 C ATOM 125 CD LYS 12 -1.925 0.578 4.628 1.00 2.75 C ATOM 126 CE LYS 12 -3.103 0.355 3.683 1.00 2.75 C ATOM 127 NZ LYS 12 -3.890 1.594 3.403 1.00 2.75 N ATOM 131 C LYS 12 2.380 2.998 5.522 1.00 2.75 C ATOM 132 O LYS 12 2.241 4.155 5.933 1.00 2.75 O ATOM 133 N LYS 13 3.283 2.135 6.017 1.00 3.56 N ATOM 135 CA LYS 13 4.248 2.458 7.088 1.00 3.56 C ATOM 136 CB LYS 13 4.882 1.185 7.663 1.00 3.56 C ATOM 137 CG LYS 13 3.982 0.417 8.623 1.00 3.56 C ATOM 138 CD LYS 13 4.699 -0.795 9.208 1.00 3.56 C ATOM 139 CE LYS 13 3.815 -1.577 10.177 1.00 3.56 C ATOM 140 NZ LYS 13 3.520 -0.842 11.443 1.00 3.56 N ATOM 144 C LYS 13 5.345 3.440 6.640 1.00 3.56 C ATOM 145 O LYS 13 5.738 4.317 7.413 1.00 3.56 O ATOM 146 N LYS 14 5.819 3.280 5.393 1.00 4.00 N ATOM 148 CA LYS 14 6.861 4.128 4.771 1.00 4.00 C ATOM 149 CB LYS 14 7.398 3.487 3.487 1.00 4.00 C ATOM 150 CG LYS 14 8.456 2.421 3.715 1.00 4.00 C ATOM 151 CD LYS 14 9.015 1.910 2.392 1.00 4.00 C ATOM 152 CE LYS 14 10.146 0.909 2.596 1.00 4.00 C ATOM 153 NZ LYS 14 11.388 1.517 3.163 1.00 4.00 N ATOM 157 C LYS 14 6.408 5.568 4.480 1.00 4.00 C ATOM 158 O LYS 14 7.205 6.505 4.620 1.00 4.00 O ATOM 159 N PHE 15 5.136 5.726 4.084 1.00 3.06 N ATOM 161 CA PHE 15 4.518 7.031 3.765 1.00 3.06 C ATOM 162 CB PHE 15 3.109 6.815 3.144 1.00 3.06 C ATOM 163 CG PHE 15 2.612 7.958 2.249 1.00 3.06 C ATOM 164 CD1 PHE 15 1.855 9.024 2.789 1.00 3.06 C ATOM 165 CD2 PHE 15 2.868 7.950 0.856 1.00 3.06 C ATOM 166 CE1 PHE 15 1.358 10.067 1.960 1.00 3.06 C ATOM 167 CE2 PHE 15 2.379 8.986 0.014 1.00 3.06 C ATOM 168 CZ PHE 15 1.622 10.047 0.568 1.00 3.06 C ATOM 169 C PHE 15 4.425 7.916 5.028 1.00 3.06 C ATOM 170 O PHE 15 4.613 9.136 4.946 1.00 3.06 O ATOM 171 N LYS 16 4.135 7.281 6.174 1.00 2.83 N ATOM 173 CA LYS 16 4.021 7.941 7.489 1.00 2.83 C ATOM 174 CB LYS 16 2.534 8.072 7.905 1.00 2.83 C ATOM 175 CG LYS 16 2.204 9.286 8.781 1.00 2.83 C ATOM 176 CD LYS 16 0.725 9.324 9.133 1.00 2.83 C ATOM 177 CE LYS 16 0.397 10.529 10.002 1.00 2.83 C ATOM 178 NZ LYS 16 -1.049 10.580 10.355 1.00 2.83 N ATOM 182 C LYS 16 4.830 7.095 8.506 1.00 2.83 C ATOM 183 O LYS 16 4.270 6.237 9.206 1.00 2.83 O ATOM 184 N ASN 17 6.153 7.321 8.539 1.00 1.30 N ATOM 186 CA ASN 17 7.086 6.614 9.438 1.00 1.30 C ATOM 187 CB ASN 17 8.224 5.951 8.624 1.00 1.30 C ATOM 188 CG ASN 17 8.808 4.713 9.309 1.00 1.30 C ATOM 189 OD1 ASN 17 8.348 3.592 9.088 1.00 1.30 O ATOM 190 ND2 ASN 17 9.834 4.917 10.130 1.00 1.30 N ATOM 193 C ASN 17 7.655 7.585 10.494 1.00 1.30 C ATOM 194 O ASN 17 7.571 7.299 11.694 1.00 1.30 O ATOM 195 N CYS 18 8.199 8.728 10.032 1.00 2.02 N ATOM 197 CA CYS 18 8.814 9.819 10.838 1.00 2.02 C ATOM 198 CB CYS 18 7.748 10.815 11.343 1.00 2.02 C ATOM 199 SG CYS 18 6.814 11.637 10.031 1.00 2.02 S ATOM 200 C CYS 18 9.773 9.419 11.985 1.00 2.02 C ATOM 201 O CYS 18 10.976 9.699 11.905 1.00 2.02 O ATOM 202 N GLU 19 9.230 8.774 13.028 1.00 1.69 N ATOM 204 CA GLU 19 9.983 8.306 14.208 1.00 1.69 C ATOM 205 CB GLU 19 9.363 8.847 15.507 1.00 1.69 C ATOM 206 CG GLU 19 9.510 10.355 15.706 1.00 1.69 C ATOM 207 CD GLU 19 8.881 10.839 17.000 1.00 1.69 C ATOM 208 OE1 GLU 19 9.587 10.870 18.031 1.00 1.69 O ATOM 209 OE2 GLU 19 7.683 11.192 16.986 1.00 1.69 O ATOM 210 C GLU 19 10.016 6.771 14.247 1.00 1.69 C ATOM 211 O GLU 19 9.028 6.122 13.877 1.00 1.69 O ATOM 212 N VAL 20 11.154 6.208 14.680 1.00 1.85 N ATOM 214 CA VAL 20 11.367 4.750 14.779 1.00 1.85 C ATOM 215 CB VAL 20 12.645 4.288 13.925 1.00 1.85 C ATOM 216 CG1 VAL 20 13.959 4.886 14.469 1.00 1.85 C ATOM 217 CG2 VAL 20 12.718 2.757 13.789 1.00 1.85 C ATOM 218 C VAL 20 11.408 4.285 16.262 1.00 1.85 C ATOM 219 O VAL 20 12.137 4.860 17.082 1.00 1.85 O ATOM 220 N ARG 21 10.587 3.272 16.576 1.00 1.37 N ATOM 222 CA ARG 21 10.470 2.675 17.920 1.00 1.37 C ATOM 223 CB ARG 21 9.057 2.910 18.493 1.00 1.37 C ATOM 224 CG ARG 21 8.992 3.109 20.018 1.00 1.37 C ATOM 225 CD ARG 21 7.564 3.336 20.511 1.00 1.37 C ATOM 226 NE ARG 21 6.727 2.135 20.405 1.00 1.37 N ATOM 228 CZ ARG 21 5.446 2.057 20.764 1.00 1.37 C ATOM 229 NH1 ARG 21 4.806 3.109 21.266 1.00 1.37 N ATOM 232 NH2 ARG 21 4.795 0.912 20.619 1.00 1.37 N ATOM 235 C ARG 21 10.758 1.165 17.801 1.00 1.37 C ATOM 236 O ARG 21 10.380 0.541 16.800 1.00 1.37 O ATOM 237 N CYS 22 11.435 0.605 18.812 1.00 2.35 N ATOM 239 CA CYS 22 11.797 -0.824 18.865 1.00 2.35 C ATOM 240 CB CYS 22 13.307 -0.986 19.121 1.00 2.35 C ATOM 241 SG CYS 22 13.933 -2.683 18.997 1.00 2.35 S ATOM 242 C CYS 22 10.979 -1.570 19.938 1.00 2.35 C ATOM 243 O CYS 22 10.996 -1.191 21.119 1.00 2.35 O ATOM 244 N ASP 23 10.232 -2.591 19.495 1.00 1.80 N ATOM 246 CA ASP 23 9.379 -3.437 20.351 1.00 1.80 C ATOM 247 CB ASP 23 7.890 -3.232 19.988 1.00 1.80 C ATOM 248 CG ASP 23 6.939 -3.532 21.152 1.00 1.80 C ATOM 249 OD1 ASP 23 6.496 -4.695 21.279 1.00 1.80 O ATOM 250 OD2 ASP 23 6.628 -2.601 21.926 1.00 1.80 O ATOM 251 C ASP 23 9.785 -4.909 20.138 1.00 1.80 C ATOM 252 O ASP 23 10.422 -5.234 19.128 1.00 1.80 O ATOM 253 N GLU 24 9.411 -5.778 21.089 1.00 1.82 N ATOM 255 CA GLU 24 9.710 -7.223 21.051 1.00 1.82 C ATOM 256 CB GLU 24 10.152 -7.727 22.435 1.00 1.82 C ATOM 257 CG GLU 24 11.511 -7.209 22.899 1.00 1.82 C ATOM 258 CD GLU 24 11.902 -7.733 24.269 1.00 1.82 C ATOM 259 OE1 GLU 24 12.546 -8.802 24.337 1.00 1.82 O ATOM 260 OE2 GLU 24 11.566 -7.077 25.277 1.00 1.82 O ATOM 261 C GLU 24 8.514 -8.050 20.541 1.00 1.82 C ATOM 262 O GLU 24 7.384 -7.874 21.017 1.00 1.82 O ATOM 263 N SER 25 8.778 -8.915 19.552 1.00 2.79 N ATOM 265 CA SER 25 7.772 -9.794 18.926 1.00 2.79 C ATOM 266 CB SER 25 7.706 -9.539 17.410 1.00 2.79 C ATOM 267 OG SER 25 8.986 -9.649 16.805 1.00 2.79 O ATOM 269 C SER 25 8.067 -11.278 19.201 1.00 2.79 C ATOM 270 O SER 25 9.223 -11.642 19.448 1.00 2.79 O ATOM 271 N ASN 26 7.017 -12.113 19.155 1.00 2.34 N ATOM 273 CA ASN 26 7.103 -13.567 19.387 1.00 2.34 C ATOM 274 CB ASN 26 5.984 -14.017 20.348 1.00 2.34 C ATOM 275 CG ASN 26 6.347 -15.270 21.149 1.00 2.34 C ATOM 276 OD1 ASN 26 6.898 -15.180 22.248 1.00 2.34 O ATOM 277 ND2 ASN 26 6.024 -16.439 20.603 1.00 2.34 N ATOM 280 C ASN 26 7.000 -14.318 18.042 1.00 2.34 C ATOM 281 O ASN 26 7.704 -15.314 17.836 1.00 2.34 O ATOM 282 N HIS 27 6.125 -13.826 17.152 1.00 1.33 N ATOM 284 CA HIS 27 5.892 -14.402 15.815 1.00 1.33 C ATOM 285 CG HIS 27 4.188 -15.937 14.658 1.00 1.33 C ATOM 286 CD2 HIS 27 3.533 -15.934 13.471 1.00 1.33 C ATOM 287 ND1 HIS 27 4.648 -17.225 14.835 1.00 1.33 N ATOM 289 CE1 HIS 27 4.288 -17.967 13.802 1.00 1.33 C ATOM 290 NE2 HIS 27 3.612 -17.207 12.961 1.00 1.33 N ATOM 292 C HIS 27 6.256 -13.352 14.746 1.00 1.33 C ATOM 293 O HIS 27 5.873 -12.180 14.868 1.00 1.33 O ATOM 294 CB HIS 27 4.415 -14.845 15.668 1.00 1.33 C ATOM 295 N CYS 28 7.001 -13.790 13.713 1.00 1.70 N ATOM 297 CA CYS 28 7.488 -12.985 12.557 1.00 1.70 C ATOM 298 CB CYS 28 6.343 -12.646 11.575 1.00 1.70 C ATOM 299 SG CYS 28 6.859 -11.942 9.983 1.00 1.70 S ATOM 300 C CYS 28 8.301 -11.714 12.884 1.00 1.70 C ATOM 301 O CYS 28 7.995 -11.003 13.850 1.00 1.70 O ATOM 302 N VAL 29 9.328 -11.450 12.063 1.00 2.84 N ATOM 304 CA VAL 29 10.227 -10.281 12.188 1.00 2.84 C ATOM 305 CB VAL 29 11.754 -10.691 12.140 1.00 2.84 C ATOM 306 CG1 VAL 29 12.647 -9.567 12.696 1.00 2.84 C ATOM 307 CG2 VAL 29 11.999 -11.978 12.929 1.00 2.84 C ATOM 308 C VAL 29 9.899 -9.350 11.001 1.00 2.84 C ATOM 309 O VAL 29 9.594 -9.836 9.901 1.00 2.84 O ATOM 310 N GLU 30 9.934 -8.032 11.239 1.00 2.53 N ATOM 312 CA GLU 30 9.637 -7.038 10.196 1.00 2.53 C ATOM 313 CB GLU 30 8.479 -6.100 10.619 1.00 2.53 C ATOM 314 CG GLU 30 8.545 -5.498 12.041 1.00 2.53 C ATOM 315 CD GLU 30 7.364 -4.598 12.349 1.00 2.53 C ATOM 316 OE1 GLU 30 7.455 -3.381 12.080 1.00 2.53 O ATOM 317 OE2 GLU 30 6.345 -5.107 12.862 1.00 2.53 O ATOM 318 C GLU 30 10.836 -6.218 9.692 1.00 2.53 C ATOM 319 O GLU 30 11.560 -5.593 10.480 1.00 2.53 O ATOM 320 N VAL 31 11.041 -6.281 8.371 1.00 3.38 N ATOM 322 CA VAL 31 12.084 -5.555 7.627 1.00 3.38 C ATOM 323 CB VAL 31 13.302 -6.466 7.176 1.00 3.38 C ATOM 324 CG1 VAL 31 14.295 -6.591 8.320 1.00 3.38 C ATOM 325 CG2 VAL 31 12.856 -7.872 6.736 1.00 3.38 C ATOM 326 C VAL 31 11.382 -4.879 6.436 1.00 3.38 C ATOM 327 O VAL 31 10.451 -5.465 5.866 1.00 3.38 O ATOM 328 N ARG 32 11.812 -3.663 6.078 1.00 2.77 N ATOM 330 CA ARG 32 11.212 -2.891 4.972 1.00 2.77 C ATOM 331 CB ARG 32 10.778 -1.483 5.445 1.00 2.77 C ATOM 332 CG ARG 32 11.802 -0.670 6.267 1.00 2.77 C ATOM 333 CD ARG 32 11.257 0.703 6.627 1.00 2.77 C ATOM 334 NE ARG 32 12.219 1.490 7.403 1.00 2.77 N ATOM 336 CZ ARG 32 12.060 2.766 7.757 1.00 2.77 C ATOM 337 NH1 ARG 32 10.967 3.443 7.417 1.00 2.77 N ATOM 340 NH2 ARG 32 13.005 3.372 8.462 1.00 2.77 N ATOM 343 C ARG 32 12.114 -2.830 3.724 1.00 2.77 C ATOM 344 O ARG 32 13.340 -2.722 3.850 1.00 2.77 O ATOM 345 N CYS 33 11.488 -2.895 2.538 1.00 2.44 N ATOM 347 CA CYS 33 12.184 -2.899 1.242 1.00 2.44 C ATOM 348 CB CYS 33 11.731 -4.106 0.401 1.00 2.44 C ATOM 349 SG CYS 33 9.966 -4.148 -0.007 1.00 2.44 S ATOM 350 C CYS 33 12.048 -1.608 0.420 1.00 2.44 C ATOM 351 O CYS 33 10.935 -1.104 0.215 1.00 2.44 O ATOM 352 N SER 34 13.200 -1.087 -0.026 1.00 3.01 N ATOM 354 CA SER 34 13.309 0.137 -0.839 1.00 3.01 C ATOM 355 CB SER 34 13.949 1.272 -0.025 1.00 3.01 C ATOM 356 OG SER 34 13.177 1.578 1.124 1.00 3.01 O ATOM 358 C SER 34 14.144 -0.148 -2.098 1.00 3.01 C ATOM 359 O SER 34 13.799 0.325 -3.188 1.00 3.01 O ATOM 360 N ASP 35 15.232 -0.917 -1.932 1.00 4.71 N ATOM 362 CA ASP 35 16.152 -1.309 -3.021 1.00 4.71 C ATOM 363 CB ASP 35 17.594 -0.795 -2.759 1.00 4.71 C ATOM 364 CG ASP 35 18.094 -1.079 -1.335 1.00 4.71 C ATOM 365 OD1 ASP 35 18.701 -2.151 -1.116 1.00 4.71 O ATOM 366 OD2 ASP 35 17.891 -0.224 -0.446 1.00 4.71 O ATOM 367 C ASP 35 16.129 -2.832 -3.273 1.00 4.71 C ATOM 368 O ASP 35 15.856 -3.268 -4.398 1.00 4.71 O ATOM 369 N THR 36 16.418 -3.616 -2.221 1.00 5.71 N ATOM 371 CA THR 36 16.430 -5.095 -2.243 1.00 5.71 C ATOM 372 CB THR 36 17.712 -5.671 -1.563 1.00 5.71 C ATOM 373 OG1 THR 36 17.928 -5.022 -0.303 1.00 5.71 O ATOM 375 CG2 THR 36 18.931 -5.471 -2.454 1.00 5.71 C ATOM 376 C THR 36 15.168 -5.595 -1.511 1.00 5.71 C ATOM 377 O THR 36 14.616 -4.853 -0.689 1.00 5.71 O ATOM 378 N LYS 37 14.726 -6.830 -1.796 1.00 3.80 N ATOM 380 CA LYS 37 13.511 -7.412 -1.185 1.00 3.80 C ATOM 381 CB LYS 37 12.948 -8.557 -2.057 1.00 3.80 C ATOM 382 CG LYS 37 13.947 -9.633 -2.533 1.00 3.80 C ATOM 383 CD LYS 37 13.256 -10.696 -3.380 1.00 3.80 C ATOM 384 CE LYS 37 14.226 -11.772 -3.862 1.00 3.80 C ATOM 385 NZ LYS 37 14.743 -12.644 -2.766 1.00 3.80 N ATOM 389 C LYS 37 13.584 -7.835 0.301 1.00 3.80 C ATOM 390 O LYS 37 14.459 -8.616 0.699 1.00 3.80 O ATOM 391 N TYR 38 12.660 -7.272 1.091 1.00 3.45 N ATOM 393 CA TYR 38 12.497 -7.514 2.534 1.00 3.45 C ATOM 394 CB TYR 38 13.001 -6.310 3.368 1.00 3.45 C ATOM 395 CG TYR 38 14.508 -6.019 3.299 1.00 3.45 C ATOM 396 CD1 TYR 38 15.432 -6.720 4.116 1.00 3.45 C ATOM 397 CE1 TYR 38 16.823 -6.428 4.079 1.00 3.45 C ATOM 398 CD2 TYR 38 15.019 -5.016 2.441 1.00 3.45 C ATOM 399 CE2 TYR 38 16.409 -4.717 2.398 1.00 3.45 C ATOM 400 CZ TYR 38 17.299 -5.427 3.218 1.00 3.45 C ATOM 401 OH TYR 38 18.645 -5.141 3.181 1.00 3.45 O ATOM 403 C TYR 38 11.024 -7.804 2.845 1.00 3.45 C ATOM 404 O TYR 38 10.139 -7.252 2.179 1.00 3.45 O ATOM 405 N THR 39 10.772 -8.671 3.837 1.00 2.18 N ATOM 407 CA THR 39 9.409 -9.060 4.258 1.00 2.18 C ATOM 408 CB THR 39 9.262 -10.608 4.378 1.00 2.18 C ATOM 409 OG1 THR 39 10.346 -11.142 5.149 1.00 2.18 O ATOM 411 CG2 THR 39 9.249 -11.257 2.998 1.00 2.18 C ATOM 412 C THR 39 9.043 -8.407 5.606 1.00 2.18 C ATOM 413 O THR 39 9.894 -8.297 6.497 1.00 2.18 O ATOM 414 N LEU 40 7.783 -7.966 5.729 1.00 0.96 N ATOM 416 CA LEU 40 7.271 -7.293 6.935 1.00 0.96 C ATOM 417 CB LEU 40 6.631 -5.936 6.551 1.00 0.96 C ATOM 418 CG LEU 40 6.738 -4.675 7.446 1.00 0.96 C ATOM 419 CD1 LEU 40 8.042 -3.887 7.232 1.00 0.96 C ATOM 420 CD2 LEU 40 5.567 -3.772 7.144 1.00 0.96 C ATOM 421 C LEU 40 6.276 -8.167 7.726 1.00 0.96 C ATOM 422 O LEU 40 5.749 -9.152 7.197 1.00 0.96 O ATOM 423 N CYS 41 6.045 -7.785 8.990 1.00 1.62 N ATOM 425 CA CYS 41 5.141 -8.474 9.923 1.00 1.62 C ATOM 426 CB CYS 41 5.850 -8.671 11.271 1.00 1.62 C ATOM 427 SG CYS 41 4.919 -9.612 12.513 1.00 1.62 S ATOM 428 C CYS 41 3.841 -7.684 10.114 1.00 1.62 C ATOM 429 O CYS 41 2.791 -8.323 10.334 1.00 1.62 O ATOM 430 OXT CYS 41 3.891 -6.439 10.030 1.00 1.62 O TER 431 CYS 41 END